[Bio-Linux] Upgrading to Bio-Linux 7 from 6
GOSSNER Anton
anton.gossner at roslin.ed.ac.uk
Fri Nov 30 05:40:40 EST 2012
Hi,
Just wondered if anybody is having the same problem and has solved it or if need to do a full install.
Following Tims instructions for upgrading, all gone well with initial upgrade of Ubuntu and start of Bio-Linux packages but always stops and exits with;
Verifying that everything installed...
python-biopython failed to install
python-biopython-doc failed to install
Not all packages installed properly - exiting.
despite the fact python is installed;
Reading package lists... Done
Building dependency tree
Reading state information... Done
python-software-properties is already the newest version.
Have removed and reinstalled via Synaptic Package Manager, restarted and rerun the script numerous times and various different combinations of installing and uninstalling python but to no avail also run "apt-get autoremove"
No joy, any ideas?, also seems to uninstall Coffee and reinstall in every time I run the script.
Anton
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