[Bio-Linux] FW: Galaxy on Bio-Linux 8 does not start. 'ExpatError'

[jaeger.julian at gmx.net]

Hi everyone!

I just installed Bio-Linux 8. Unfortunatly Galaxy won't start.

Here is the recent traceback from the logfile:

Traceback (most recent call last):
  File "/usr/lib/galaxy-server/lib/galaxy/webapps/galaxy/buildapp.py", line
39, in app_factory
    app = UniverseApplication( global_conf = global_conf, **kwargs )
  File "/usr/lib/galaxy-server/lib/galaxy/app.py", line 63, in __init__
    self._configure_tool_data_tables( from_shed_config=False )
  File "/usr/lib/galaxy-server/lib/galaxy/config.py", line 592, in
_configure_tool_data_tables
    from_shed_config=from_shed_config )
  File "/usr/lib/galaxy-server/lib/galaxy/tools/data/__init__.py", line 63,
in load_from_config_file
    tree = util.parse_xml( filename )
  File "/usr/lib/galaxy-server/lib/galaxy/util/__init__.py", line 154, in
parse_xml
    tree = ElementTree.parse(fname)
  File
"/usr/lib/galaxy-server/eggs/elementtree-1.2.6_20050316-py2.7.egg/elementtre
e/ElementTree.py", line 859, in parse
    tree.parse(source, parser)
  File
"/usr/lib/galaxy-server/eggs/elementtree-1.2.6_20050316-py2.7.egg/elementtre
e/ElementTree.py", line 584, in parse
    self._root = parser.close()
  File
"/usr/lib/galaxy-server/eggs/elementtree-1.2.6_20050316-py2.7.egg/elementtre
e/ElementTree.py", line 1251, in close
    self._parser.Parse("", 1) # end of data
ExpatError: no element found: line 1, column 0

 

Can anyone help, please?

 

Many thanks , Julian

 

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