[Bio-Linux] Running pymol through x2Go. Crashes

Rosin, Angela lister at liverpool.ac.uk
Thu Mar 12 06:28:19 EDT 2015


Hi all,

Pymol runs fine on Biolinux 8 as a desktop session but as soon as soon as you connect and run via x2Go it crashes when you open a pdb file with a segmentation fault. 

Mar 12 09:51:04 wolfson32 kernel: [3532840.217920] python2.7[14279]: segfault at 7fff5788a610 ip 00007f8a0e014932 sp 00007fff576870d0 error 6 in libgallium.so.0.0.0[7f8a0dedc000+1e9000]

It's version 1.7.0 installed via synaptic (not something I've tried to build myself!). Other graphical applications work fine. Has anyone seen something similar and is there a fix apart from "build the latest version and see if it works".

Thanks,

Angela Rosin
Technology Enhanced Learning (TEL) Support Technician/Supervisor
Institute of Learning and Teaching | Faculty of Health and Life Sciences | Life Sciences Building
e: lister at liv.ac.uk t: 0151 795 5139 w: http://www.liv.ac.uk/learning-and-teaching/tel/



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