[Bio-linux-list] FW: run galaxy in biolinux (locally)

Tony Travis tony.travis at minke-informatics.co.uk
Sun Dec 18 18:38:46 EST 2016


On 16/12/16 13:29, Timms-Wilson, Tracey wrote:
>  
> 
>  
> 
> *From:*Chintan Bhagat [mailto:cbb.chintan at gmail.com]
> *Sent:* 11 December 2016 06:42
> *To:* Timms-Wilson, Tracey <tmt at ceh.ac.uk>
> *Subject:* run galaxy in biolinux (locally)
> 
>  
> 
> Dear sir/madam,
> 
>  
> 
> I use biolinux for various bioinformatic purposes.I am using Galaxy
> server for the multiple application. Now, I want to run Galaxy locally
> for large file and datasets for the different purpose. I tried the
> different command given on biolinux site and other platforms, but I am
> not able to run it locally. Further, I interested to install PEAR tool
> from the galaxy. Can you explain to me how to do it in step by step manner? 
> 
>  
> 
> I have tried this command post on biolinux site
> 
>  
> 
> *sudo galaxy-add-administrator cbb.chintan at gmail.com
> <mailto:cbb.chintan at gmail.com> http://environmentalomics.org/bio-linux-galaxy/*
> 
>  
> 
> Then, I opened galaxy page and logged using email id:
> cbb.chintan at gmail.com <mailto:cbb.chintan at gmail.com>, the message
> apper is "THIS GALAXY IS NOT CONFIGURED FOR THIS INSTANT (APPLICATION)"
> 
>  
> 
> Other way i tried, but it is not
> working.http://galaxy-dev.bx.psu.narkive.com/2n6tU7vi/galaxy-dont-work-on-my-bio-linux

Hi, Chintan.

I've checked that the commands work using Bio-Linux 8 without any
problems. Make sure that you have registered the user on the local
Galaxy server before you try to make it an admin user: See the screenshot.

HTH,

  Tony.

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