<div dir="ltr"><div><div><div>Hi All<br></div>I am trying to reinstall Parallels Tools
('cd /media/Parallels\ Tools/' followed by 'sudo ./install) but getting
following error. I would really appreciate if somebody help me resolve
this problem. Eventually I want to upgrade to Biolinux8.<br>
<br></div>Thanks<br><br></div>Tauqeer<br><br>2014-08-03T01:14:11-0400: execCmd: ./install --install [143]<br>2014-08-03T01:14:11-0400: Error: An error occurred when installing Parallels Tools. Please go to /var/log/parallels-tools-install.log for more information.<br>
2014-08-03T01:14:15-0400: Exiting with code 1<br>2014-08-03T01:14:31-0400: Exiting with code 1<br>2014-08-03T01:30:07-0400: <br><br>Parallels Tools 8.0.18619.1001606 Installer started.<br>2014-08-03T01:30:17-0400: execCmd: ./installer/pm.sh check_guest_tools 2>&1 [0]<br>
<br>Sun Aug 3 01:30:17 EDT 2014<br>Start installation or upgrade of Guest Tools<br>new version of parallels tools<br>Installed Guest Tools were not found<br>Perform installation into the /usr/lib/parallels-tools directory<br>
cat: /usr/lib/parallels-tools/kmods/../version: No such file or directory<br>Start installation of prl_eth kernel module<br>make: Entering directory `/usr/lib/parallels-tools/kmods'<br>cd prl_eth/pvmnet && make<br>
make[1]: Entering directory `/usr/lib/parallels-tools/kmods/prl_eth/pvmnet'<br>make -C /lib/modules/3.13.0-32-generic/build M=/usr/lib/parallels-tools/kmods/prl_eth/pvmnet<br>make[2]: Entering directory `/usr/src/linux-headers-3.13.0-32-generic'<br>
LD /usr/lib/parallels-tools/kmods/prl_eth/pvmnet/built-in.o<br> CC [M] /usr/lib/parallels-tools/kmods/prl_eth/pvmnet/pvmnet.o<br> LD [M] /usr/lib/parallels-tools/kmods/prl_eth/pvmnet/prl_eth.o<br> Building modules, stage 2.<br>
MODPOST 1 modules<br> CC /usr/lib/parallels-tools/kmods/prl_eth/pvmnet/prl_eth.mod.o<br> LD [M] /usr/lib/parallels-tools/kmods/prl_eth/pvmnet/prl_eth.ko<br>make[2]: Leaving directory `/usr/src/linux-headers-3.13.0-32-generic'<br>
make[1]: Leaving directory `/usr/lib/parallels-tools/kmods/prl_eth/pvmnet'<br>cd prl_tg/Toolgate/Guest/Linux/prl_tg && make<br>make[1]: Entering directory `/usr/lib/parallels-tools/kmods/prl_tg/Toolgate/Guest/Linux/prl_tg'<br>
make -C /lib/modules/3.13.0-32-generic/build SUBDIRS=/usr/lib/parallels-tools/kmods/prl_tg/Toolgate/Guest/Linux/prl_tg SRCROOT=/usr/lib/parallels-tools/kmods/prl_tg/Toolgate/Guest/Linux/prl_tg modules<br>make[2]: Entering directory `/usr/src/linux-headers-3.13.0-32-generic'<br>
CC [M] /usr/lib/parallels-tools/kmods/prl_tg/Toolgate/Guest/Linux/prl_tg/prltg.o<br>/usr/lib/parallels-tools/kmods/prl_tg/Toolgate/Guest/Linux/prl_tg/prltg.c: In function ‘prl_tg_write’:<br>/usr/lib/parallels-tools/kmods/prl_tg/Toolgate/Guest/Linux/prl_tg/prltg.c:796:9: error: implicit declaration of function ‘PDE’ [-Werror=implicit-function-declaration]<br>
/usr/lib/parallels-tools/kmods/prl_tg/Toolgate/Guest/Linux/prl_tg/prltg.c:796:31: error: invalid type argument of ‘->’ (have ‘int’)<br>/usr/lib/parallels-tools/kmods/prl_tg/Toolgate/Guest/Linux/prl_tg/prltg.c: In function ‘prl_tg_init_one’:<br>
/usr/lib/parallels-tools/kmods/prl_tg/Toolgate/Guest/Linux/prl_tg/prltg.c:1303:2: error: implicit declaration of function ‘create_proc_entry’ [-Werror=implicit-function-declaration]<br>/usr/lib/parallels-tools/kmods/prl_tg/Toolgate/Guest/Linux/prl_tg/prltg.c:1303:4: warning: assignment makes pointer from integer without a cast [enabled by default]<br>
/usr/lib/parallels-tools/kmods/prl_tg/Toolgate/Guest/Linux/prl_tg/prltg.c:1305:4: error: dereferencing pointer to incomplete type<br>/usr/lib/parallels-tools/kmods/prl_tg/Toolgate/Guest/Linux/prl_tg/prltg.c:1306:4: error: dereferencing pointer to incomplete type<br>
cc1: some warnings being treated as errors<br>make[3]: *** [/usr/lib/parallels-tools/kmods/prl_tg/Toolgate/Guest/Linux/prl_tg/prltg.o] Error 1<br>make[2]: *** [_module_/usr/lib/parallels-tools/kmods/prl_tg/Toolgate/Guest/Linux/prl_tg] Error 2<br>
make[2]: Leaving directory `/usr/src/linux-headers-3.13.0-32-generic'<br>make[1]: *** [prl_tg] Error 2<br>make[1]: Leaving directory `/usr/lib/parallels-tools/kmods/prl_tg/Toolgate/Guest/Linux/prl_tg'<br>make: *** [installme] Error 2<br>
make: Leaving directory `/usr/lib/parallels-tools/kmods'<br>Error: could not build kernel modules<br>Error: failed to install kernel modules<br></div><div class="gmail_extra"><br><br><div class="gmail_quote">On Sun, Aug 3, 2014 at 1:40 AM, Tauqeer Alam <span dir="ltr"><<a href="mailto:tauqeer9@gmail.com" target="_blank">tauqeer9@gmail.com</a>></span> wrote:<br>
<blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex"><div dir="ltr"><div><div><div>Hi All<br></div>I am trying to reinstall Parallels Tools ('cd /media/Parallels\ Tools/' followed by 'sudo ./install) but getting following error. I would really appreciate if somebody help me resolve this problem. Eventually I want to upgrade to Biolinux8.<br>
<br></div>Thanks<br><br></div>Tauqeer<br></div><div class="gmail_extra"><br><br><div class="gmail_quote"><div><div class="h5">On Sat, Aug 2, 2014 at 2:57 PM, Stephen P. Molnar <span dir="ltr"><<a href="mailto:s.molnar@sbcglobal.net" target="_blank">s.molnar@sbcglobal.net</a>></span> wrote:<br>
</div></div><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex"><div><div class="h5"><div link="blue" vlink="purple" lang="EN-US"><div><div><div><p>Please see the following messages.<u></u><u></u></p>
<p><u></u> <u></u></p><p>Thanks in advance.<u></u><u></u></p><p><u></u> <u></u></p><p>Stephen P. Molnar, Ph.D. Life is a fuzzy set<u></u><u></u></p><p>Foundation for Chemistry Stochastic and multivariate<u></u><u></u></p>
<p><a href="http://www.FoundationForChemistry.com" target="_blank">www.FoundationForChemistry.com</a><u></u><u></u></p><p><a href="tel:%28614%29312-7528" value="+16143127528" target="_blank">(614)312-7528</a> (c)<u></u><u></u></p>
<p>Skype: smolnar1<u></u><u></u></p><p><u></u> <u></u></p><p><u></u> <u></u></p><p>-----Original Message-----<u></u><u></u></p><p>From: Tim Booth [<a href="mailto:tbooth@ceh.ac.uk" target="_blank">mailto:tbooth@ceh.ac.uk</a>]<u></u><u></u></p>
<p>Sent: Friday, August 01, 2014 9:40 AM<u></u><u></u></p><p>To: Stephen P. Molnar<u></u><u></u></p><p>Subject: Re: [Bio-linux-announce] Bio-Linux 8 now available<u></u><u></u></p><p><u></u> <u></u></p><p>Hi Stephen,<u></u><u></u></p>
<p><u></u> <u></u></p><p>Glad you sorted out the shell. <u></u><u></u></p><p><u></u> <u></u></p><p>I'm sorry, but I can't say what might be up with the keyboard and I'm not going to start experimenting with XFCE right now as I have other priorities. You may well have more luck on the discussion mailing list:<u></u><u></u></p>
<p><a href="http://nebclists.nerc.ac.uk/mailman/listinfo/bio-linux" target="_blank">http://nebclists.nerc.ac.uk/mailman/listinfo/bio-linux</a><u></u><u></u></p><p><u></u> <u></u></p><p>Cheers,<u></u><u></u></p><p><u></u> <u></u></p>
<p>TIM<u></u><u></u></p><p><u></u> <u></u></p><p>On Fri, 2014-08-01 at 11:59 +0100, Stephen P. Molnar wrote:<u></u><u></u></p><p>> Thanks for the reply. As it turns out that was a red-faced forehead <u></u><u></u></p>
<p>> slapping problem. After dispatching my note I realized that the shell <u></u><u></u></p><p>> was zsh.<u></u><u></u></p><p>> <u></u><u></u></p><p>> Thanks to your reply I have successfully changed the default shell to <u></u><u></u></p>
<p>> bash.<u></u><u></u></p><p>> <u></u><u></u></p><p>> There is, however anew problem, also a head scratcher for me. As I <u></u><u></u></p><p>> don't like the Gnome shell and had become unenchanted with KDE, my <u></u><u></u></p>
<p>> desktop of choice on my linux machines is XFCE, with Xfe as the file <u></u><u></u></p><p>> manager of choice. I find that the keyboard doesn't seem to be <u></u><u></u></p><p>> recognized by the xfwrite editor. On the other hand, nedit works as it <u></u><u></u></p>
<p>> should.<u></u><u></u></p><p>> <u></u><u></u></p><p>> Your input about this problem would be much appreciated.<u></u><u></u></p><p>> <u></u><u></u></p><p>> Thanks in advance.<u></u><u></u></p><p>> <u></u><u></u></p>
<p>> Stephen P. Molnar, Ph.D. Life is a fuzzy set<u></u><u></u></p><p>> Foundation for Chemistry Stochastic and multivariate<u></u><u></u></p><p>
> <a href="http://www.FoundationForChemistry.com" target="_blank">www.FoundationForChemistry.com</a><u></u><u></u></p>
<p>> <a href="tel:%28614%29312-7528" value="+16143127528" target="_blank">(614)312-7528</a> (c)<u></u><u></u></p><p>> Skype: smolnar1<u></u><u></u></p><p>> <u></u><u></u></p><p>> <u></u><u></u></p><p>> -----Original Message-----<u></u><u></u></p>
<p>> From: Tim Booth [<a href="mailto:tbooth@ceh.ac.uk" target="_blank">mailto:tbooth@ceh.ac.uk</a>]<u></u><u></u></p><p>> Sent: Friday, August 01, 2014 5:05 AM<u></u><u></u></p><p>> To: Stephen P. Molnar<u></u><u></u></p>
<p>> Subject: Re: [Bio-linux-announce] Bio-Linux 8 now available<u></u><u></u></p><p>> <u></u><u></u></p><p>> Hi Stephen,<u></u><u></u></p><p>> <u></u><u></u></p><p>> Nothing so mysterious here. The default shell on Bio-Linux is ZSH, so if you are a BASH fan you'll want to do:<u></u><u></u></p>
<p>> <u></u><u></u></p><p>> chsh -s /bin/bash<u></u><u></u></p><p>> exec bash -l<u></u><u></u></p><p>> <u></u><u></u></p><p>> We do already have both L and ll aliased to that command, but not "l" <u></u><u></u></p>
<p>> :-)<u></u><u></u></p><p>> <u></u><u></u></p><p>> Cheers,<u></u><u></u></p><p>> <u></u><u></u></p><p>> TIM<u></u><u></u></p><p>> <u></u><u></u></p><p>> On Thu, 2014-07-31 at 20:16 +0100, Stephen P. Molnar wrote:<u></u><u></u></p>
<p>> > I have encountered a rather strange problem with the new BioLinux v<u></u><u></u></p><p>> > 8 latest.<u></u><u></u></p><p>> > <u></u><u></u></p><p>> > I installed the distribution in a VMware Player without any problems <u></u><u></u></p>
<p>> > or error messages. In fact, I have a Debian v-7.6.0 distribution <u></u><u></u></p><p>> > running in the same VMware device. Consequently, I have confidence <u></u><u></u></p><p>> > in the virtual computer and my laptop on which it is running.<u></u><u></u></p>
<p>> > <u></u><u></u></p><p>> > I edited .bashrc to include the line alias l='ls -l --color'<u></u><u></u></p><p>> > <u></u><u></u></p><p>> > When I source the edited .bashrc file I get the following:<u></u><u></u></p>
<p>> > <u></u><u></u></p><p>> > computation@inga[computation] source .bashrc [<u></u><u></u></p><p>> > 2:57PM]<u></u><u></u></p><p>> > .bashrc:16: command not found: shopt<u></u><u></u></p>
<p>> > .bashrc:24: command not found: shopt<u></u><u></u></p><p>> > .bashrc:108: command not found: shopt<u></u><u></u></p><p>> > /usr/share/bash-completion/bash_completion:35: parse error near `]]'<u></u><u></u></p>
<p>> > \[\e]0;\u@\h: \w\a\]${debian_chroot:+($debian_chroot)}\u@\h:\w\$ [<u></u><u></u></p><p>> > 2:57PM]<u></u><u></u></p><p>> > <u></u><u></u></p><p>> > The problem seems to be that shopt is missing!<u></u><u></u></p>
<p>> > <u></u><u></u></p><p>> > Please advise.<u></u><u></u></p><p>> > <u></u><u></u></p><p>> > Thanks in advance.<u></u><u></u></p><p>> > <u></u><u></u></p><p>> > Stephen P. Molnar, Ph.D. Life is a fuzzy<u></u><u></u></p>
<p>> > set<u></u><u></u></p><p>> > Foundation for Chemistry Stochastic and<u></u><u></u></p><p>> > multivariate<u></u><u></u></p><p>> > <a href="http://www.FoundationForChemistry.com" target="_blank">www.FoundationForChemistry.com</a><u></u><u></u></p>
<p>> > <a href="tel:%28614%29312-7528" value="+16143127528" target="_blank">(614)312-7528</a> (c)<u></u><u></u></p><p>> > Skype: smolnar1<u></u><u></u></p><p>> > <u></u><u></u></p><p>> > -----Original Message-----<u></u><u></u></p>
<p>> > From: Tim Booth [<a href="mailto:tbooth@ceh.ac.uk" target="_blank">mailto:tbooth@ceh.ac.uk</a>]<u></u><u></u></p><p>> > Sent: Wednesday, July 30, 2014 11:55 AM<u></u><u></u></p><p>> > To: <a href="mailto:bio-linux-announce@nebclists.nerc.ac.uk" target="_blank">bio-linux-announce@nebclists.nerc.ac.uk</a>; Bio-Linux mailing list<u></u><u></u></p>
<p>> > Subject: [Bio-linux-announce] Bio-Linux 8 now available<u></u><u></u></p><p>> > <u></u><u></u></p><p>> > Dear All,<u></u><u></u></p><p>> > <u></u><u></u></p><p>> > The Bio-Linux system gets a major new release every two years <u></u><u></u></p>
<p>> > following the regular Ubuntu "LTS" releases. Since Ubuntu 14.04 LTS <u></u><u></u></p><p>> > came out in April I've been working with help from the Bio-Linux <u></u><u></u></p><p>> > community to make Bio-Linux 8 and it is now ready and available via the new website.<u></u><u></u></p>
<p>> > <u></u><u></u></p><p>> > <a href="http://environmentalomics.org/bio-linux/" target="_blank">http://environmentalomics.org/bio-linux/</a><u></u><u></u></p><p>> > <u></u><u></u></p><p>> > Upgrades from Bio-Linux 7 to 8 do not require re-installation. I <u></u><u></u></p>
<p>> > encourage you all to upgrade soon, as new bioinformatics packages <u></u><u></u></p><p>> > will no longer be provided for Bio-Linux 7. See the "Installation"<u></u><u></u></p><p>> > section for instructions on upgrading your BL7 machine.<u></u><u></u></p>
<p>> > <u></u><u></u></p><p>> > The new Ubuntu 14.04 base system brings many benefits such as <u></u><u></u></p><p>> > increased hardware compatibility and new office and multimedia <u></u><u></u></p><p>
> > software, but Bio-Linux itself also has many improvements and new/updated packages.<u></u><u></u></p><p>> > Also for the first time there is a version in OVA format for <u></u><u></u></p><p>> > VirtualBox/VMWare users, and this version will be updated whenever <u></u><u></u></p>
<p>> > new ISO files are released. See the "What's New" and "Software List"<u></u><u></u></p><p>> > pages on the website for details.<u></u><u></u></p><p>> > <u></u><u></u></p><p>
> > As ever, please report problems and feedback to <u></u><u></u></p><p>> > <a href="mailto:helpdesk@nebc.nerc.ac.uk" target="_blank">helpdesk@nebc.nerc.ac.uk</a>. I can't promise to fix everything but <u></u><u></u></p>
<p>> > will endeavour to provide help and squash bugs where I can. Also, <u></u><u></u></p><p>> > please let me know if you use Bio-Linux for teaching or manage a <u></u><u></u></p><p>> > large installation on your departmental server or computing lab.<u></u><u></u></p>
<p>> > The more we can prove that people find this stuff useful, the more likely we are to get future funding!<u></u><u></u></p><p>> > <u></u><u></u></p><p>> > I hope you enjoy using Bio-Linux 8.<u></u><u></u></p>
<p>> > <u></u><u></u></p><p>> > TIM<u></u><u></u></p><p>> > <u></u><u></u></p><p>> > --<u></u><u></u></p><p>> > Tim Booth <<a href="mailto:tbooth@ceh.ac.uk" target="_blank">tbooth@ceh.ac.uk</a>><u></u><u></u></p>
<p>> > NERC Environmental Bioinformatics Centre<u></u><u></u></p><p>> > <u></u><u></u></p><p>> > Centre for Ecology and Hydrology<u></u><u></u></p><p>> > Maclean Bldg, Benson Lane<u></u><u></u></p>
<p>> > Crowmarsh Gifford<u></u><u></u></p><p>> > Wallingford, England<u></u><u></u></p><p>> > OX10 8BB<u></u><u></u></p><p>> > <u></u><u></u></p><p>> > <a href="http://nebc.nerc.ac.uk" target="_blank">http://nebc.nerc.ac.uk</a><u></u><u></u></p>
<p>> > +44 1491 69 2705<u></u><u></u></p><p>> > _______________________________________________<u></u><u></u></p><p>> > Bio-Linux-announce mailing list<u></u><u></u></p><p>> > <a href="mailto:Bio-Linux-announce@nebclists.nerc.ac.uk" target="_blank">Bio-Linux-announce@nebclists.nerc.ac.uk</a><u></u><u></u></p>
<p>> > <a href="http://nebclists.nerc.ac.uk/mailman/listinfo/bio-linux-announce" target="_blank">http://nebclists.nerc.ac.uk/mailman/listinfo/bio-linux-announce</a><u></u><u></u></p><p>> > <u></u><u></u></p><p>
> <u></u><u></u></p><p>> --<u></u><u></u></p><p>> Tim Booth <<a href="mailto:tbooth@ceh.ac.uk" target="_blank">tbooth@ceh.ac.uk</a>><u></u><u></u></p><p>> NERC Environmental Bioinformatics Centre<u></u><u></u></p>
<p>> <u></u><u></u></p><p>> Centre for Ecology and Hydrology<u></u><u></u></p><p>> Maclean Bldg, Benson Lane<u></u><u></u></p><p>> Crowmarsh Gifford<u></u><u></u></p><p>> Wallingford, England<u></u><u></u></p>
<p>> OX10 8BB<u></u><u></u></p><p>> <u></u><u></u></p><p>> <a href="http://nebc.nerc.ac.uk" target="_blank">http://nebc.nerc.ac.uk</a><u></u><u></u></p><p>> +44 1491 69 2705<u></u><u></u></p><p>> <u></u><u></u></p>
<p><u></u> <u></u></p><p>--<u></u><u></u></p><p>Tim Booth <<a href="mailto:tbooth@ceh.ac.uk" target="_blank">tbooth@ceh.ac.uk</a>><u></u><u></u></p><p>NERC Environmental Bioinformatics Centre <u></u><u></u></p><p><u></u> <u></u></p>
<p>Centre for Ecology and Hydrology<u></u><u></u></p><p>Maclean Bldg, Benson Lane<u></u><u></u></p><p>Crowmarsh Gifford<u></u><u></u></p><p>Wallingford, England<u></u><u></u></p><p>OX10 8BB <u></u><u></u></p><p><u></u> <u></u></p>
<p><a href="http://nebc.nerc.ac.uk" target="_blank">http://nebc.nerc.ac.uk</a><u></u><u></u></p><p>+44 1491 69 2705<u></u><u></u></p><p class="MsoNormal"><u></u> <u></u></p><p class="MsoNormal"><u></u> <u></u></p><p class="MsoNormal">
Stephen P. Molnar, Ph.D. Life is a fuzzy set<u></u><u></u></p></div></div><p class="MsoNormal"> <a href="tel:%28614%29312-7528" value="+16143127528" target="_blank">(614)312-7528</a> (c) Stochastic and multivariate<u></u><u></u></p>
<p class="MsoNormal"> Skype: smolnar1<u></u><u></u></p><p class="MsoNormal"><u></u> <u></u></p></div></div><br></div></div><div class="">_______________________________________________<br>
Bio-Linux mailing list<br>
<a href="mailto:Bio-Linux@nebclists.nerc.ac.uk" target="_blank">Bio-Linux@nebclists.nerc.ac.uk</a><br>
<a href="http://nebclists.nerc.ac.uk/mailman/listinfo/bio-linux" target="_blank">http://nebclists.nerc.ac.uk/mailman/listinfo/bio-linux</a><br>
<br></div></blockquote></div><span class="HOEnZb"><font color="#888888"><br><br clear="all"><br>-- <br><div dir="ltr"><div>*********************************************<br>Md Tauqeer Alam, Ph.D<br>Division of Infectious Diseases</div>
<div>Emory University School of Medicine</div>
<div>615 Michael Street, Atlanta, GA 30322, USA</div><div><a href="mailto:tauqeer9@gmail.com" target="_blank">tauqeer9@gmail.com</a><br></div></div>
</font></span></div>
</blockquote></div><br><br clear="all"><br>-- <br><div dir="ltr"><div>*********************************************<br>Md Tauqeer Alam, Ph.D<br>Division of Infectious Diseases</div><div>Emory University School of Medicine</div>
<div>615 Michael Street, Atlanta, GA 30322, USA</div><div><a href="mailto:tauqeer9@gmail.com" target="_blank">tauqeer9@gmail.com</a><br></div></div>
</div>