<HTML><BODY>Hello!<br><br>I faced this problem some weeks ago. I think there is some bug in the script emersed after Goggle decided to stop support 32-bit repositories. I can't fix the problem and used Biolinux disc image for installation. You can find it here <a href="http://environmentalomics.org/bio-linux-download/">http://environmentalomics.org/bio-linux-download/</a> or here <a href="http://ftp.yzu.edu.tw/Linux/bio-linux-iso/">http://ftp.yzu.edu.tw/Linux/bio-linux-iso/</a> . <br><br>With kind regards,<br>Vyacheslav<br><blockquote style="border-left:1px solid #0857A6; margin:10px; padding:0 0 0 10px;">
Пятница, 27 мая 2016, 19:54 +06:00 от Geert <g.cremers@science.ru.nl>:<br>
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<div id="style_14643572690000000011_BODY">Dear all,<br>
<br>
I was trying to update Ubuntu 14.04 to Biolinux 8, but I keep running<br>
into the same problem.<br>
<br>
Every time I run the command:<br>
<br>
wget -qO- <a href="http://nebc.nerc.ac.uk/downloads/bl8_only/upgrade8.sh" target="_blank">http://nebc.nerc.ac.uk/downloads/bl8_only/upgrade8.sh</a> | sudo<br>
sh <br>
<br>
it ends with the error message:<br>
<br>
W: Failed to fetch<br>
<a href="http://dl.google.com/linux/chrome/deb/dists/stable/Release" target="_blank">http://dl.google.com/linux/chrome/deb/dists/stable/Release</a> Unable to<br>
find expected entry 'main/binary-i386/Packages' in Release file (Wrong<br>
sources.list entry or malformed file)<br>
<br>
Using the solution from<br>
<a href="https://bugs.launchpad.net/bio-linux/+bug/1567873" target="_blank">https://bugs.launchpad.net/bio-linux/+bug/1567873</a>, I could get <br>
apt-get update to work without error messages, but when I subsequently<br>
rerun the command:<br>
<br>
wget -qO- <a href="http://nebc.nerc.ac.uk/downloads/bl8_only/upgrade8.sh" target="_blank">http://nebc.nerc.ac.uk/downloads/bl8_only/upgrade8.sh</a> | sudo<br>
sh <br>
<br>
the error message returns is if nothing happened. <br>
<br>
Afterwards apt-get update wont work either anymore(same error message).<br>
<br>
I get the feeling the upgrade8.sh script keeps replacing the files that<br>
I need to change in order to get the thing going.<br>
<br>
I've been running in circles all day so far. Any ideas are therefor more<br>
than welcome.<br>
<br>
<br>
Kind regards<br>
<br>
Geert <br>
<br>
<br>
PS.(now that I am writing an email anyways) I have already a good deal<br>
of programs on my computer that will be installed with Biolinux. Will<br>
that cause any difficulties.<br>
<br>
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<br>С уважением,<br>м.н.с. ЦНИЛ ГБОУ ВПО СибГМУ (г.Томск) <br>Вячеслав Петров<br>vyacheslav.a.petrov@mail.ru<br></BODY></HTML>