I'm pretty sure that lam-mpi is broken in this release. We're rebuilding this right now for the ncbi toolkit and will take a look at rebuilding EMBOSS with the new lam-mpi. Glen On Mar 18, 2004, at 10:01 AM, Khalil El Mazouari wrote: > Hi Glen, > I am using the BioBrew-1.0. I used /opt/BioBrew/EMBOSS/2.6.0/bin/<any > emboss application>. > Is it possible to upgrade EMBOSS to 2.8.0. > (http://www.biolinux.org/emboss.html). I tried to install it using > cluster-fork rpm -Uvh ... command, but it doesn't work. > Thanks for your help. > Khalil > > Glen Otero wrote: > >> Khalil- >> >> Which version of BioBrew are you using? Can you send the command line >> sequence of any of the jobs you're trying to run? >> >> Glen >> >> On Mar 18, 2004, at 5:29 AM, Khalil El Mazouari wrote: >> >>> Hi >>> when I try to run any emboss application, I obtained the following >>> error: >>> error while loading shared libraries: libnucleus.so.0: cannot >>> open shared object file: no such file or directory. >>> but the file is located at /opt/BioBrew/EMBOSS/2.6.0/lib/ >>> Any idea why I get this error? >>> thank you >>> Khalil >>> >>> >>> --------------------------------------------------------------------- >>> -- >>> THIS E-MAIL MESSAGE IS INTENDED ONLY FOR THE USE OF THE INDIVIDUAL OR >>> ENTITY TO WHICH IT IS ADDRESSED AND MAY CONTAIN INFORMATION THAT IS >>> PRIVILEGED, CONFIDENTIAL AND EXEMPT FROM DISCLOSURE. >>> If the reader of this E-mail message is not the intended recipient, >>> you >>> are hereby notified that any dissemination, distribution or copying >>> of >>> this communication is strictly prohibited. If you have received this >>> communication in error, please notify us immediately at >>> ablynx at ablynx.com. Thank you for your co-operation. >>> --------------------------------------------------------------------- >>> -- >>> _______________________________________________ >>> BioBrew-Users mailing list >>> BioBrew-Users at bioinformatics.org >>> https://bioinformatics.org/mailman/listinfo/BioBrew-Users >>> >>> >> Glen Otero, Ph.D. >> Linux Prophet >> 619.917.1772 >> >> _______________________________________________ >> BioBrew-Users mailing list >> BioBrew-Users at bioinformatics.org >> https://bioinformatics.org/mailman/listinfo/BioBrew-Users >> >> > > > -- > > Khalil El Mazouari, PhD. > Bioinformatics Manager > Ablynx N.V. > Technologiepark 4 > 9052 Zwijnaarde > Belgium > > Tel + 32 (0)9 261 06 40 > Fax + 32 (0)9 261 06 27 > > > > ----------------------------------------------------------------------- > THIS E-MAIL MESSAGE IS INTENDED ONLY FOR THE USE OF THE INDIVIDUAL OR > ENTITY TO WHICH IT IS ADDRESSED AND MAY CONTAIN INFORMATION THAT IS > PRIVILEGED, CONFIDENTIAL AND EXEMPT FROM DISCLOSURE. > If the reader of this E-mail message is not the intended recipient, you > are hereby notified that any dissemination, distribution or copying of > this communication is strictly prohibited. If you have received this > communication in error, please notify us immediately at > ablynx at ablynx.com. Thank you for your co-operation. > ----------------------------------------------------------------------- > _______________________________________________ > BioBrew-Users mailing list > BioBrew-Users at bioinformatics.org > https://bioinformatics.org/mailman/listinfo/BioBrew-Users > > Glen Otero, Ph.D. Linux Prophet 619.917.1772