[Bioclusters] SGE and parallel Blast

Ron Chen bioclusters@bioinformatics.org
Sat, 8 Jun 2002 17:06:48 -0700 (PDT)


I would believe so. Basically anything that requires
more than 1 CPU needs a PE.

But I'll send  an e-mail to the SGE mailing-list to
ask whether there is an easier way or not.

(http://gridengine.sunsource.net/project/gridengine/maillist.html)

-Ron


--- Ivo Grosse wrote:
> Perhaps: qsub -pe threads 2 <my_blast_script>?
> 
> Or something else instead of threads?
> 


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