> My understanding is that the Altivec optimzations arise from using > pre-fetching instructions, so the improvement will only be seen on really > insensitive searches. I'll get back with some real data, but we've had very good results and were never running insensitive searches, all cross-species. Come to think of it I think what I was impressed by was how good blast on Xserve did in general, not so much the optimized version. By the way, just to keep opinions sane, please note I am talking Xserve, not PowerMac, and there is quite a substantial difference in performance despite using same processor and same memory. Elia ******************************** * http://www.fugu-sg.org/~elia * * tel: +65 6874 1467 * * mobile: +65 9030 7613 * * fax: +65 6779 1117 * ********************************