Hi Lance: I might be able to help here :) Please send an email offline, and we can talk. Joe On Wed, 2004-01-14 at 15:13, Lance Davidow wrote: > We would like to compare regular NCBI Web Blast on a 22-node Dell > 1750 ROCKS cluster with a web-enabled MPIBLAST. The potential utility > is that MPIBLAST will have a faster turnaround time for interactive > web users under low cluster load. > > The 1.20 version of MPIBLAST comes with the script WWWBlastWrap.pl to > modify the NCBI wwwBlast and submit an MPIBLAST request from the web > page to an openPBS queue. Our cluster is using Grid Engine as its > scheduler. Has anyone modified this script to allow the submission > via web page of MPIBLAST jobs to the Parallel Environment of SGE? We > are currently using MPIBLAST via command line only, with Joe > Landman's sge_mpiblast script. > > Thanks, > Lance