>We have to know what directory you keep the input file and the db in on the >frontend, but here is the general idea: I keep them in /mnt/pvfs. Sorry, I'm not too sure about what should i add to the -i /path/to/query. >$MPIRUN -np <number of procs> -machinefile $ /path/to/file/with/nodelist >$BLASTPATH/mpiblast --config-file=$MPIBLASTCONFIG -p blastn -i >/path/to/query -d /path/to/ecoli.nt -o /path/to/results_file >> >>_________________________________________________________________ >>Get 10mb of inbox space with MSN Hotmail Extra Storage >>http://join.msn.com/?pgmarket=en-sg >> >>_______________________________________________ >>Bioclusters maillist - Bioclusters@bioinformatics.org >>https://bioinformatics.org/mailman/listinfo/bioclusters >> >> >Glen Otero, Ph.D. >Linux Prophet >619.917.1772 > >_______________________________________________ >Bioclusters maillist - Bioclusters@bioinformatics.org >https://bioinformatics.org/mailman/listinfo/bioclusters _________________________________________________________________ Get MSN Hotmail alerts on your mobile. http://en-asiasms.mobile.msn.com/ac.aspx?cid=1002