[Bioclusters] mpiblast on SGI Altix

Aaron Darling darling at cs.wisc.edu
Thu Mar 17 12:14:17 EST 2005


Jan van Haarst wrote:

>On the risk of going completely offtopic, does anybody know more on
>this _very_ intersting article ?
>http://www4.ncsu.edu/~xma/pubs/pioblast.pdf
>
>In it Heshan Lin, Xiaosong Ma, Praveen Chandramohan, Al Geist, and
>Nagiza Samatova of NCSU & ORNL describe their way of making mpiBLAST a
>lot faster.
>
>No code available yet I think, but it would be nice to know whether
>people think this research has any change to get integrated into
>mpiBLAST.
>  
>
My understanding is that the plan is to integrate most or all of these 
features with the mainline codebase this summer.

-Aaron


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