[Biococoa-dev] BCSequenceFactory

John Timmer jtimmer at bellatlantic.net
Wed Dec 1 19:41:36 EST 2004

> Hi,
> I added a new class BCSequenceFactory (in BCTools/BCSequenceTools). For
> now it can create DNA, RNA and proteins from a string, but the other
> methods should be fairly easy to fill in. I have not yet added the
> 'guess-the-type-code". To get an idea how to use it, I have added the
> factorycode in the readSwissProt file.

I added the guess the type method implementation.  Since guessing the type
involved creating the sequence, I changed its return value to the actual
sequence, rather than the type.



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