[Biococoa-dev] bug alert

[Alexander Griekspoor]

Koen, if you don't mind, would you like to do it? it's one o'clock and 
still have to do one Sinterklaas poem ;-)
So, the only things needed to be changed are:
1 make the BCSequenceFactory public (and thus update the project)
2 change the classnames of the new tools
3 change the names of the shared class methods
In principles I would like to do #2 and 3, but that will take some time 
then (2-3 days), also you're busy with some of these classes, so to 
prevent getting sync problems, I would rather leave it up to you. Let's 
put it this way, if it hasn't been changed in a few days, I'll do it 
ok?
Cheers,
Alex

Op 5-dec-04 om 0:38 heeft Koen van der Drift het volgende geschreven:

> Alex,
>
> Please go ahead and submit these changes.
>
> - Koen.
>
>
> On Dec 4, 2004, at 5:34 PM, Alexander Griekspoor wrote:
>
>> Ha Koen,
>>
>> First of all the newly added BCSequenceFactory.h file was still set 
>> to project instead of private in a fresh checkout from the CVS.
>> Next, I got a compile error that the BCFoundationDefines.h could not 
>> be found. The by now famous, quit XCode, delete the build directory, 
>> and reopen the project, helped however...
>> After that everything seems to build and runs without problems Koen..
>>
>> Something else, in general the idea would be to add the BCTools 
>> prefix to all tools, for instance:
>> // BCTools
>> #import <BioCocoa/BCToolMassCalculator.h>
>> #import <BioCocoa/BCToolTranslatorDNA.h>
>>
>> I would like to propose to do the same for the following new ones:
>> #import <BioCocoa/BCFindSequence.h>    ->  BCToolFindSequence (or 
>> even BCToolSequenceFinder)
>> #import <BioCocoa/BCSymbolCounter.h>   ->  BCToolSymbolCounter
>> #import <BioCocoa/BCComplement.h>	   ->  BCToolComplement
>> #import <BioCocoa/BCSequenceFactory.h> ->  BCToolSequenceFactory
>>
>> Similarly, lets stick to the guidelines and add the "shared" prefix 
>> to all class methods that generate static objects, thus
>> + sequenceFactory; -> + sharedSequenceFactory.
>>
>> Cheers,
>> Alex
>>
>>
>> Op 4-dec-04 om 16:45 heeft Koen van der Drift het volgende geschreven:
>>
>>> Grrr - another crash creeped in :(
>>>
>>> I will look into it tonight, but feel free to do so as well.
>>>
>>>
>>> - Koen.
>>>
>>>
>>> _______________________________________________
>>> Biococoa-dev mailing list
>>> Biococoa-dev at bioinformatics.org
>>> https://bioinformatics.org/mailman/listinfo/biococoa-dev
>>>
>>>
>> **************************************************************
>>                         ** Alexander Griekspoor **
>> **************************************************************
>>                  The Netherlands Cancer Institute
>>                  Department of Tumorbiology (H4)
>>             Plesmanlaan 121, 1066 CX, Amsterdam
>>                        Tel:  + 31 20 - 512 2023
>>                        Fax:  + 31 20 - 512 2029
>>                       AIM: mekentosj at mac.com
>>                       E-mail: a.griekspoor at nki.nl
>>                    Web: http://www.mekentosj.com
>>
>> MacOS X: The power of UNIX with the simplicity of the Mac
>>
>> ***************************************************************
>
>
>
*********************************************************
                     ** Alexander Griekspoor **
*********************************************************
               The Netherlands Cancer Institute
               Department of Tumorbiology (H4)
          Plesmanlaan 121, 1066 CX, Amsterdam
                    Tel:  + 31 20 - 512 2023
                   Fax:  + 31 20 - 512 2029
                   AIM: mekentosj at mac.com
                  E-mail: a.griekspoor at nki.nl
               Web: http://www.mekentosj.com

               4Peaks - For Peaks, Four Peaks.
        2004 Winner of the Apple Design Awards
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              http://www.mekentosj.com/4peaks

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