Koen van der Drift
kvddrift at earthlink.net
Fri Sep 3 18:55:11 EDT 2004
On Sep 3, 2004, at 1:59 PM, John Timmer wrote:
> I've checked in some updated code, still using codons but having moved
> bunch of things into arrays, rather than using BCSequenceDNA objects.
I seem to be missing BCGeneticCodeName, I get a bunch of errors related
to that. Did you forget to commit that file?
> The time is down by a bit, but not a whole lot (maybe about 10-15% -
> just under .4 seconds now). ObjC_msgSend is down to about 23%, and
> whether a base in the codon represents one in the sequence is up to
> 17.5%. Since that's the most important step, I view this as a bit of
maybe you can speed up by changing this:
[theOutput setString: [aString addSpacesToStringWithInterval:5]];
[theOutput setString: aString];
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