[Biococoa-dev] peptides and proteins

Koen van der Drift kvddrift at earthlink.net
Sat Sep 4 13:41:25 EDT 2004


I am working on a class that digests a protein sequence, and returns an 
array of peptides. I am not sure if I want to use BCProteinSequence for 
the peptides, or that I should create a separate class 
BCSequencePeptide, and/or BCSequenceAminoAcid. In that case, 
BCProteinSequence is then a subclass of either one.

My first thought would be to use this scheme:

------ BCSequencePeptide (or BCSequenceAminoAcid)

What do you guys think?


- Koen.

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