[Biococoa-dev] BCPairwiseAlignment

[Philipp Seibel]

Am 12.03.2005 um 17:42 schrieb Koen van der Drift:

>
> On Mar 12, 2005, at 10:32 AM, Alexander Griekspoor wrote:
>
>> Why the need for such categories to add sequence algorithms and not 
>> just in the BCSequenceAlignment class? The framework is completely 
>> opensource, so people can just modify the framework right (it would 
>> also stimulate them to add their additions to the public 
>> framework)... I like the idea of class methods to instantiate 
>> different kinds of alignments though!
>>
>
> I agree with Alex, we should try to use subclasses as much as possible 
> instead of categories.
>
> - Koen.
>

if i understand alex right, he also wants to add class methods to the 
new BCSequenceAlignment ( which is the new BCAlignment class ???? or 
not ?? ).
The categories are only to seperate the different algorithms, there is 
no need of course, but i think its better to administrate.

But Koen if you have a logical class - subclass structure just tell ....

Phil