[BioCocoa-dev] Peptides...

Alexander Griekspoor a.griekspoor at nki.nl
Mon Mar 28 03:51:45 EST 2005


And perhaps you've done that already, but the "speed" issue with the 
two should definitely be mentioned in the headerdoc, and if this is a 
general approach we take (which I think would be a good thing in many 
occasions) we should document the convention we make here and spend a 
few words on safety vs performance...
Good works on the speed up guys!
Alex

On 28-mrt-05, at 9:53, Charles PARNOT wrote:

> At 8:01 AM -0500 3/26/05, Koen van der Drift wrote:
> On Mar 26, 2005, at 3:11 AM, Charles PARNOT wrote:
>
> Another option is to have a 'mutableSymbolArray' and 'symbolArray' 
> methods.
>
>
>  I like the mutableSymbolArray (or maybe mutableSymbolArrayCopy) 
> method. That should indeed return a new instance with which the the 
> user can do what she want. The symbolArray should just return a 
> pointer as it is right now (I already changed that in CVS).
>
>
>  - Koen.
>
> I did not see the change (did you commit?) so I made it while I was 
> working on the final integration of sequence classes with symbol sets. 
> I was not sure where to change the call to symbolArray into 
> mutableSymbolArray, so that 'Peptides' runs fast?
>
> charles
>
> NB: here are the methods
>
> - (NSMutableArray *)mutableSymbolArray
>  {
>  return symbolArray;
>  }
>
>  - (NSArray *)symbolArray
>  {
>    return [[symbolArray copy] autorelease];
>  }
>
> -- 
>
> Help science go fast forward:
>  http://cmgm.stanford.edu/~cparnot/xgrid-stanford/
>
>  Charles Parnot
>  charles.parnot at stanford.edu
>
>  Room  B157 in Beckman Center
>  279, Campus Drive
>  Stanford University
>  Stanford, CA 94305 (USA)
>
>  Tel +1 650 725 7754
>  Fax +1 650 725 8021
> _______________________________________________
> Biococoa-dev mailing list
> Biococoa-dev at bioinformatics.org
> https://bioinformatics.org/mailman/listinfo/biococoa-dev
>
**************************************************************
                         ** Alexander Griekspoor **
**************************************************************
                  The Netherlands Cancer Institute
                  Department of Tumorbiology (H4)
             Plesmanlaan 121, 1066 CX, Amsterdam
                        Tel:  + 31 20 - 512 2023
                        Fax:  + 31 20 - 512 2029
                       AIM: mekentosj at mac.com
                       E-mail: a.griekspoor at nki.nl
                    Web: http://www.mekentosj.com

MacOS X: The power of UNIX with the simplicity of the Mac

***************************************************************
-------------- next part --------------
A non-text attachment was scrubbed...
Name: not available
Type: text/enriched
Size: 2969 bytes
Desc: not available
URL: <http://www.bioinformatics.org/pipermail/biococoa-dev/attachments/20050328/e3858f69/attachment.bin>


More information about the Biococoa-dev mailing list