[Biococoa-dev] BCCachedSequenceFile

Koen van der Drift kvddrift at earthlink.net
Sat Sep 22 17:05:31 EDT 2007


On Sep 22, 2007, at 4:50 PM, Charles Parnot wrote:

> I don't know what the status was on the BCSequence implementation,  
> but one of the "todo" things was to switch from NSArray to C arrays  
> behind the scenes, while still exposing NSArray too in the  
> interface. But I think Koen did some of that transition??

That should indeed be all in place. BCSequence now uses NSData to  
store characters. Only if needed for specific calculations, BCSymbols  
will be generated, through methods such as symbolArray and  
symbolAtIndex.

- Koen.



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