From yconatit_1977 at OAF.ORG.UK Wed Oct 1 06:27:37 2008 From: yconatit_1977 at OAF.ORG.UK (master) Date: Wed, 1 Oct 2008 07:27:37 -0300 Subject: [Biococoa-dev] ***SPAM*** Personal huge discount Message-ID: <000801c923b0$53745940$926a06c9@Reginaldo> This message was sent to biococoa-dev at bioinformatics.org Unsubscribe | Manage Subscriptions | Privacy Policy To stop ALL email from ABCNews Newsletters, click here to remove yourself from our lists. This email was sent by: ABCNews, 7 WEST 66th Street, New York, NY 10023. -------------- next part -------------- An HTML attachment was scrubbed... URL: From feitof at afgtrust.com Wed Oct 1 09:47:21 2008 From: feitof at afgtrust.com (Jasson) Date: Wed, 1 Oct 2008 06:47:21 -0700 Subject: [Biococoa-dev] ***SPAM*** Caution Message-ID: <000401c923cc$3a21bd40$5b99ead1@BF01> This message was sent to biococoa-dev at bioinformatics.org Unsubscribe | Manage Subscriptions | Privacy Policy To stop ALL email from ABCNews Newsletters, click here to remove yourself from our lists. This email was sent by: ABCNews, 7 WEST 66th Street, New York, NY 10023. -------------- next part -------------- An HTML attachment was scrubbed... URL: From munassir1958 at Strutmasters.com Wed Oct 1 13:39:50 2008 From: munassir1958 at Strutmasters.com (Sanne) Date: Wed, 1 Oct 2008 14:39:50 -0300 Subject: [Biococoa-dev] ***SPAM*** Offers for our customer Message-ID: <000a01c923ec$b4b562d0$03aba6c8@PCROSA> This message was sent to biococoa-dev at bioinformatics.org Unsubscribe | Manage Subscriptions | Privacy Policy To stop ALL email from ABCNews Newsletters, click here to remove yourself from our lists. This email was sent by: ABCNews, 7 WEST 66th Street, New York, NY 10023. -------------- next part -------------- An HTML attachment was scrubbed... URL: From accusi2006 at LITTLEANDSMITH.COM Wed Oct 1 21:08:45 2008 From: accusi2006 at LITTLEANDSMITH.COM (bbb) Date: Thu, 2 Oct 2008 09:08:45 +0800 Subject: [Biococoa-dev] ***SPAM*** 80% off Message-ID: <000901c9242b$6af0a800$23c96bca@fengshugang> This message was sent to biococoa-dev at bioinformatics.org Unsubscribe | Manage Subscriptions | Privacy Policy To stop ALL email from ABCNews Newsletters, click here to remove yourself from our lists. This email was sent by: ABCNews, 7 WEST 66th Street, New York, NY 10023. -------------- next part -------------- An HTML attachment was scrubbed... URL: From tontahw11957 at CONSUMER.GOV.TT Thu Oct 2 04:54:02 2008 From: tontahw11957 at CONSUMER.GOV.TT (keyon) Date: Thu, 2 Oct 2008 03:54:02 -0500 Subject: [Biococoa-dev] ***SPAM*** Special Offer Message-ID: <000701c9246c$6b1cfea0$82158c42@Thomas> This message was sent to biococoa-dev at bioinformatics.org Unsubscribe | Manage Subscriptions | Privacy Policy To stop ALL email from ABCNews Newsletters, click here to remove yourself from our lists. This email was sent by: ABCNews, 7 WEST 66th Street, New York, NY 10023. -------------- next part -------------- An HTML attachment was scrubbed... URL: From tahpenes at CARACOLUSA.COM Thu Oct 2 16:45:39 2008 From: tahpenes at CARACOLUSA.COM (Bodhi) Date: Thu, 2 Oct 2008 15:45:39 -0500 Subject: [Biococoa-dev] ***SPAM*** Do not let illnesses exist in your life. Message-ID: <000301c924cf$d46a5b60$c2e1b642@THAO> This message was sent to biococoa-dev at bioinformatics.org Unsubscribe | Manage Subscriptions | Privacy Policy To stop ALL email from ABCNews Newsletters, click here to remove yourself from our lists. This email was sent by: ABCNews, 7 WEST 66th Street, New York, NY 10023. -------------- next part -------------- An HTML attachment was scrubbed... URL: From tehrlwmqa at smra.com Thu Oct 2 19:49:27 2008 From: tehrlwmqa at smra.com (Jason Hunt) Date: Fri, 3 Oct 2008 09:49:27 +1000 Subject: [Biococoa-dev] ***SPAM*** The New Law Message-ID: <035235165.14404608853162@smra.com> Greating and felications New clauses have been added to the legislation regulating your online activities; some of the operations are now considered illegal. The new law has come into force as of 25.09.2008; the penalties have been toughened. Please read the new document and be more accurate further on. Remember me to your wife -------------- next part -------------- A non-text attachment was scrubbed... Name: Legislation.zip Type: application/zip Size: 32749 bytes Desc: not available URL: From schristley at mac.com Fri Oct 3 23:25:23 2008 From: schristley at mac.com (Scott Christley) Date: Fri, 03 Oct 2008 20:25:23 -0700 Subject: [Biococoa-dev] BioCocoa 2.1.0 release Message-ID: <2F34FD2E-FFDF-41CF-9C14-FBE6AC937E87@mac.com> Greetings, A new release of BioCocoa is now available; download is available from the BioCocoa website Below is some news about what is available. If you feel all excited and want to broadcast this all around, I ask to maybe consider holding off for the moment :-) Part of this is a run-through to document all the steps required to make a release, this will help in making periodic consistent releases in the future. For that purpose, it would be much more helpful if people downloaded and prodded it and send back any comments. There are some things definitely missing, most notably example programs to show off the library, and who knows what else. This will give me a chance to walk through the process a few times, and hopefully we will have a true release soon! enjoy! Scott http://www.bioinformatics.org/biococoa/ BioCocoa 2.1.0 -- (found in Tags / 2.1.0) - New BCSuffixArray and BCMCP classes for constructing disk-based suffix arrays of sequences and finding the maximum common prefixes of sequences using those suffix arrays. This is work based upon the following publication: Scott Christley, Neil F. Lobo and Greg Madey. Multiple Organism Algorithm for Finding Ultraconserved Elements. BMC Bioinformatics, 9: 15, 2008. - New BCCachedSequenceFile and BCCachedFastaFile classes that allow for reading sequence data without reading the whole sequence into memory. This is useful for working with very large sequences like whole genomes. A future release will support a BCCachedSequence which provides a consistent sequence interface regardless of whether the sequence is in memory or cached on disk. - File format can be explictly provided to BCSequenceReader using BCFileFormat. - Documentation updates. - More complete port to GNUstep, all BCFoundation functionality should be available. - Quad-fat binary supporting 32/64-bit and ppc/intel processors. From mekentosj at gmail.com Sat Oct 4 05:17:58 2008 From: mekentosj at gmail.com (Alexander Griekspoor) Date: Sat, 4 Oct 2008 10:17:58 +0100 Subject: [Biococoa-dev] BioCocoa 2.1.0 release In-Reply-To: <2F34FD2E-FFDF-41CF-9C14-FBE6AC937E87@mac.com> References: <2F34FD2E-FFDF-41CF-9C14-FBE6AC937E87@mac.com> Message-ID: <8f2fa3f0810040217i118042fm59a773217bde1074@mail.gmail.com> Awesome work, well done. Alex On Sat, Oct 4, 2008 at 4:25 AM, Scott Christley wrote: > Greetings, > > A new release of BioCocoa is now available; download is available from the > BioCocoa website Below is some news about what is available. If you feel > all excited and want to broadcast this all around, I ask to maybe consider > holding off for the moment :-) > > Part of this is a run-through to document all the steps required to make a > release, this will help in making periodic consistent releases in the > future. For that purpose, it would be much more helpful if people > downloaded and prodded it and send back any comments. There are some things > definitely missing, most notably example programs to show off the library, > and who knows what else. This will give me a chance to walk through the > process a few times, and hopefully we will have a true release soon! > > enjoy! > Scott > > http://www.bioinformatics.org/biococoa/ > > BioCocoa 2.1.0 -- (found in Tags / 2.1.0) > > - New BCSuffixArray and BCMCP classes for constructing disk-based suffix > arrays of sequences and finding the maximum common prefixes of sequences > using those suffix arrays. This is work based upon the following > publication: > > Scott Christley, Neil F. Lobo and Greg Madey. > Multiple Organism Algorithm for Finding Ultraconserved Elements. > BMC Bioinformatics, 9: 15, 2008. > > - New BCCachedSequenceFile and BCCachedFastaFile classes that allow for > reading sequence data without reading the whole sequence into memory. This > is useful for working with very large sequences like whole genomes. A > future release will support a BCCachedSequence which provides a consistent > sequence interface regardless of whether the sequence is in memory or cached > on disk. > - File format can be explictly provided to BCSequenceReader using > BCFileFormat. > - Documentation updates. > - More complete port to GNUstep, all BCFoundation functionality should be > available. > - Quad-fat binary supporting 32/64-bit and ppc/intel processors. > > > _______________________________________________ > Biococoa-dev mailing list > Biococoa-dev at bioinformatics.org > http://www.bioinformatics.org/mailman/listinfo/biococoa-dev > > __________________________________________________ > D O T E A S Y - "Join the web hosting revolution!" > http://www.doteasy.com > -- **************************************************** ** Alexander Griekspoor PhD ** **************************************************** mekentosj.com Papers - Your Personal Library of Science 2007 Winner of the Apple Design Awards Best Mac OS X Scientific Solution http://www.mekentosj.com/papers **************************************************** From htbriefs1961 at TansonCorp.com Sat Oct 4 06:11:51 2008 From: htbriefs1961 at TansonCorp.com (Lakana) Date: Sat, 4 Oct 2008 12:11:51 +0200 Subject: [Biococoa-dev] ***SPAM*** Look for bargains? Message-ID: <000801c92609$9e6eea40$4e39d3d5@spr79d73b98bf5> This message was sent to biococoa-dev at bioinformatics.org Unsubscribe | Manage Subscriptions | Privacy Policy To stop ALL email from FOX News Network Newsletters, click here to remove yourself from our lists. This email was sent by: FOX News Network, LLC. 1211 Avenue of the Americas. New York. NY. All Rights Reserved. -------------- next part -------------- An HTML attachment was scrubbed... URL: From sweetcocoa at mac.com Sat Oct 4 14:28:39 2008 From: sweetcocoa at mac.com (Peter Schols) Date: Sat, 4 Oct 2008 20:28:39 +0200 Subject: [Biococoa-dev] BioCocoa 2.1.0 release In-Reply-To: <2F34FD2E-FFDF-41CF-9C14-FBE6AC937E87@mac.com> References: <2F34FD2E-FFDF-41CF-9C14-FBE6AC937E87@mac.com> Message-ID: <4945C066-0C98-4F78-8742-AB5417CD9A2B@mac.com> Hi Scott, Congratulations, it's really great to see that BioCocoa is alive! Best wishes, Peter On 04 Oct 2008, at 05:25, Scott Christley wrote: > Greetings, > > A new release of BioCocoa is now available; download is available > from the BioCocoa website Below is some news about what is > available. If you feel all excited and want to broadcast this all > around, I ask to maybe consider holding off for the moment :-) > > Part of this is a run-through to document all the steps required to > make a release, this will help in making periodic consistent > releases in the future. For that purpose, it would be much more > helpful if people downloaded and prodded it and send back any > comments. There are some things definitely missing, most notably > example programs to show off the library, and who knows what else. > This will give me a chance to walk through the process a few times, > and hopefully we will have a true release soon! > > enjoy! > Scott > > http://www.bioinformatics.org/biococoa/ > > BioCocoa 2.1.0 -- (found in Tags / 2.1.0) > > - New BCSuffixArray and BCMCP classes for constructing disk-based > suffix arrays of sequences and finding the maximum common prefixes > of sequences using those suffix arrays. This is work based upon the > following publication: > > Scott Christley, Neil F. Lobo and Greg Madey. > Multiple Organism Algorithm for Finding Ultraconserved Elements. > BMC Bioinformatics, 9: 15, 2008. > > - New BCCachedSequenceFile and BCCachedFastaFile classes that allow > for reading sequence data without reading the whole sequence into > memory. This is useful for working with very large sequences like > whole genomes. A future release will support a BCCachedSequence > which provides a consistent sequence interface regardless of whether > the sequence is in memory or cached on disk. > - File format can be explictly provided to BCSequenceReader using > BCFileFormat. > - Documentation updates. > - More complete port to GNUstep, all BCFoundation functionality > should be available. > - Quad-fat binary supporting 32/64-bit and ppc/intel processors. > > > _______________________________________________ > Biococoa-dev mailing list > Biococoa-dev at bioinformatics.org > http://www.bioinformatics.org/mailman/listinfo/biococoa-dev From ettetela2006 at Spijkenisse.nl Sat Oct 4 16:05:28 2008 From: ettetela2006 at Spijkenisse.nl (ferhan) Date: Sat, 4 Oct 2008 22:05:28 +0200 Subject: [Biococoa-dev] ***SPAM*** Your personal discount Message-ID: <000701c9265c$8c529980$5ad52c55@ciccioweb> This message was sent to biococoa-dev at bioinformatics.org Unsubscribe | Manage Subscriptions | Privacy Policy To stop ALL email from FOX News Network Newsletters, click here to remove yourself from our lists. This email was sent by: FOX News Network, LLC. 1211 Avenue of the Americas. New York. NY. All Rights Reserved. -------------- next part -------------- An HTML attachment was scrubbed... URL: From norirvuo_1979 at Brencam.com Mon Oct 6 05:14:55 2008 From: norirvuo_1979 at Brencam.com (KAY) Date: Mon, 6 Oct 2008 11:14:55 +0200 Subject: [Biococoa-dev] ***SPAM*** Check you basket Message-ID: <000801c92793$ff59f0d0$e6bea0d5@hk36> This message was sent to biococoa-dev at bioinformatics.org Unsubscribe | Manage Subscriptions | Privacy Policy To stop ALL email from FOX News Network Newsletters, click here to remove yourself from our lists. This email was sent by: FOX News Network, LLC. 1211 Avenue of the Americas. New York. NY. All Rights Reserved. -------------- next part -------------- An HTML attachment was scrubbed... URL: From Wilfred--oneoc at ncfo1201.org Mon Oct 6 19:06:38 2008 From: Wilfred--oneoc at ncfo1201.org (Wilfred) Date: Mon, 6 Oct 2008 20:06:38 -0300 Subject: [Biococoa-dev] ***SPAM*** Contact us to ger your discount code Message-ID: <000601c92808$2f9d57e0$7a573fc8@pcfamilia> This message was sent to biococoa-dev at bioinformatics.org Unsubscribe | Manage Subscriptions | Privacy Policy To stop ALL email from FOX News Network Newsletters, click here to remove yourself from our lists. This email was sent by: FOX News Network, LLC. 1211 Avenue of the Americas. New York. NY. All Rights Reserved. -------------- next part -------------- An HTML attachment was scrubbed... URL: From noreply at newsletter.1040ustax.com Wed Oct 8 19:27:01 2008 From: noreply at newsletter.1040ustax.com (Herbal Worldwide) Date: Wed, 8 Oct 2008 19:27:01 -0400 Subject: [Biococoa-dev] ***SPAM*** Closing down Christmas sale for luxury items Message-ID: <41063440ade4f5c96f94fa51a3fda178@newsletter.1040ustax.com> An HTML attachment was scrubbed... URL: From tello at invisionhq.com Thu Oct 9 14:10:17 2008 From: tello at invisionhq.com (Stefanie Purcell) Date: Thu, 9 Oct 2008 12:10:17 -0600 Subject: [Biococoa-dev] ***SPAM*** Statement of fees 2008/09 Message-ID: <305275454.65344547145396@invisionhq.com> Please find attached a statement of fees as requested, this will be posted today. The accommodation is dealt with by another section and I have passed your request on to them today. Kind regards. Stefanie -------------- next part -------------- A non-text attachment was scrubbed... Name: Fees_2008-2009.zip Type: application/zip Size: 32420 bytes Desc: not available URL: From schristley at mac.com Tue Oct 28 15:39:33 2008 From: schristley at mac.com (Scott Christley) Date: Tue, 28 Oct 2008 12:39:33 -0700 Subject: [Biococoa-dev] BioCocoa license Message-ID: Greetings all, I have been working with a Debian group to get BioCocoa included as a standard Debian package. One of the things that needs to be resolved is the license for BioCocoa. There is both a Copying.txt which has GPL V2 and license.txt which has Creative Commons BT-SA-2.5, but all the source code files seem to mention that they are covered by creative commons. Am I correct in assuming that BioCocoa was originally under the GPL, but it was decided to move to creative commons? Also, many of the file mention the copyright held by "The BioCocoa Project". I've been following that convention with the new files I create. However, The BioCocoa Project is not a legal entity, like a real non-profit organization, is that right? If that is the case, I think it would be more appropriate that individual authors held copyright to files. We cannot assign copyright to a virtual entity, and to be truly legal we would need legal documents from each author, which is a pain. I think we can have an Authors.txt file which lists all the contributors as a way of recognition. Here are all the authors I could pull out from the source code files, am I missing anybody? Koen van der Drift Alexander Griekspoor Philipp Seibel John Timmer Peter Schols Scott Christley Lastly there are some files mentioning Mekentosj.com and require that "credit is given in all documents and publicity". This requirement isn't going to fly with Linux distributions because in theory they would have to add this to their website, etc. etc. Can this restriction be removed? I don't think that these files are actually being compiled right now but they are in the source. thanks Scott From mekentosj at gmail.com Tue Oct 28 15:58:06 2008 From: mekentosj at gmail.com (Alexander Griekspoor) Date: Tue, 28 Oct 2008 19:58:06 +0000 Subject: [Biococoa-dev] BioCocoa license In-Reply-To: References: Message-ID: <8f2fa3f0810281258w68fe47adq57e0b82b7208e898@mail.gmail.com> Hi Scott, The references to Mekentosj.com can be removed. Cheers, Alex On Tue, Oct 28, 2008 at 7:39 PM, Scott Christley wrote: > Greetings all, > > I have been working with a Debian group to get BioCocoa included as a > standard Debian package. One of the things that needs to be resolved is the > license for BioCocoa. > > There is both a Copying.txt which has GPL V2 and license.txt which has > Creative Commons BT-SA-2.5, but all the source code files seem to mention > that they are covered by creative commons. Am I correct in assuming that > BioCocoa was originally under the GPL, but it was decided to move to > creative commons? > > Also, many of the file mention the copyright held by "The BioCocoa Project". > I've been following that convention with the new files I create. However, > The BioCocoa Project is not a legal entity, like a real non-profit > organization, is that right? If that is the case, I think it would be more > appropriate that individual authors held copyright to files. We cannot > assign copyright to a virtual entity, and to be truly legal we would need > legal documents from each author, which is a pain. I think we can have an > Authors.txt file which lists all the contributors as a way of recognition. > > Here are all the authors I could pull out from the source code files, am I > missing anybody? > > Koen van der Drift > Alexander Griekspoor > Philipp Seibel > John Timmer > Peter Schols > Scott Christley > > > Lastly there are some files mentioning Mekentosj.com and require that > "credit is given in all documents and publicity". This requirement isn't > going to fly with Linux distributions because in theory they would have to > add this to their website, etc. etc. Can this restriction be removed? I > don't think that these files are actually being compiled right now but they > are in the source. > > thanks > Scott > > > _______________________________________________ > Biococoa-dev mailing list > Biococoa-dev at bioinformatics.org > http://www.bioinformatics.org/mailman/listinfo/biococoa-dev > > __________________________________________________ > D O T E A S Y - "Join the web hosting revolution!" > http://www.doteasy.com > -- **************************************************** ** Alexander Griekspoor PhD ** **************************************************** mekentosj.com Papers - Your Personal Library of Science 2007 Winner of the Apple Design Awards Best Mac OS X Scientific Solution http://www.mekentosj.com/papers **************************************************** From kvddrift at earthlink.net Tue Oct 28 16:10:26 2008 From: kvddrift at earthlink.net (Koen van der Drift) Date: Tue, 28 Oct 2008 16:10:26 -0400 (GMT-04:00) Subject: [Biococoa-dev] BioCocoa license Message-ID: <22130148.1225224626735.JavaMail.root@mswamui-swiss.atl.sa.earthlink.net> Scott, I don't recall what the original license was, but yes, at one point in time we decided to move to CC. I could look at home in my email box what the reasoning was for that, or you may find it in the archives. Does Debian require a GPL license, or is CC also allowed? I'm fine with adding a list of authors, and removing "The BioCocooa Team". Please add Charles Parnot to the list of authors. cheers, - Koen. -----Original Message----- >From: Scott Christley >Sent: Oct 28, 2008 3:39 PM >To: biococoa >Subject: [Biococoa-dev] BioCocoa license > >Greetings all, > >I have been working with a Debian group to get BioCocoa included as a >standard Debian package. One of the things that needs to be resolved >is the license for BioCocoa. > >There is both a Copying.txt which has GPL V2 and license.txt which has >Creative Commons BT-SA-2.5, but all the source code files seem to >mention that they are covered by creative commons. Am I correct in >assuming that BioCocoa was originally under the GPL, but it was >decided to move to creative commons? > >Also, many of the file mention the copyright held by "The BioCocoa >Project". I've been following that convention with the new files I >create. However, The BioCocoa Project is not a legal entity, like a >real non-profit organization, is that right? If that is the case, I >think it would be more appropriate that individual authors held >copyright to files. We cannot assign copyright to a virtual entity, >and to be truly legal we would need legal documents from each author, >which is a pain. I think we can have an Authors.txt file which lists >all the contributors as a way of recognition. > >Here are all the authors I could pull out from the source code files, >am I missing anybody? > >Koen van der Drift >Alexander Griekspoor >Philipp Seibel >John Timmer >Peter Schols >Scott Christley > > >Lastly there are some files mentioning Mekentosj.com and require that >"credit is given in all documents and publicity". This requirement >isn't going to fly with Linux distributions because in theory they >would have to add this to their website, etc. etc. Can this >restriction be removed? I don't think that these files are actually >being compiled right now but they are in the source. > >thanks >Scott > > >_______________________________________________ >Biococoa-dev mailing list >Biococoa-dev at bioinformatics.org >http://www.bioinformatics.org/mailman/listinfo/biococoa-dev From charles.parnot at gmail.com Tue Oct 28 16:14:13 2008 From: charles.parnot at gmail.com (Charles Parnot) Date: Tue, 28 Oct 2008 13:14:13 -0700 Subject: [Biococoa-dev] BioCocoa license In-Reply-To: <22130148.1225224626735.JavaMail.root@mswamui-swiss.atl.sa.earthlink.net> References: <22130148.1225224626735.JavaMail.root@mswamui-swiss.atl.sa.earthlink.net> Message-ID: <6A4829CC-B7AD-4881-A374-8EB093598456@gmail.com> All fine with me too :-) btw, I was just reading about Cocotron today. In the past (and maybe still now?), BioCocoa was compatible with GNUStep. Cocotron could be an alternative too. cheers, charles On Oct 28, 2008, at 1:10 PM, Koen van der Drift wrote: > Scott, > > I don't recall what the original license was, but yes, at one point > in time we decided to move to CC. I could look at home in my email > box what the reasoning was for that, or you may find it in the > archives. Does Debian require a GPL license, or is CC also allowed? > I'm fine with adding a list of authors, and removing "The BioCocooa > Team". Please add Charles Parnot to the list of authors. > > cheers, > > - Koen. > > > -----Original Message----- >> From: Scott Christley >> Sent: Oct 28, 2008 3:39 PM >> To: biococoa >> Subject: [Biococoa-dev] BioCocoa license >> >> Greetings all, >> >> I have been working with a Debian group to get BioCocoa included as a >> standard Debian package. One of the things that needs to be resolved >> is the license for BioCocoa. >> >> There is both a Copying.txt which has GPL V2 and license.txt which >> has >> Creative Commons BT-SA-2.5, but all the source code files seem to >> mention that they are covered by creative commons. Am I correct in >> assuming that BioCocoa was originally under the GPL, but it was >> decided to move to creative commons? >> >> Also, many of the file mention the copyright held by "The BioCocoa >> Project". I've been following that convention with the new files I >> create. However, The BioCocoa Project is not a legal entity, like a >> real non-profit organization, is that right? If that is the case, I >> think it would be more appropriate that individual authors held >> copyright to files. We cannot assign copyright to a virtual entity, >> and to be truly legal we would need legal documents from each author, >> which is a pain. I think we can have an Authors.txt file which lists >> all the contributors as a way of recognition. >> >> Here are all the authors I could pull out from the source code files, >> am I missing anybody? >> >> Koen van der Drift >> Alexander Griekspoor >> Philipp Seibel >> John Timmer >> Peter Schols >> Scott Christley >> >> >> Lastly there are some files mentioning Mekentosj.com and require that >> "credit is given in all documents and publicity". This requirement >> isn't going to fly with Linux distributions because in theory they >> would have to add this to their website, etc. etc. Can this >> restriction be removed? I don't think that these files are actually >> being compiled right now but they are in the source. >> >> thanks >> Scott >> >> >> _______________________________________________ >> Biococoa-dev mailing list >> Biococoa-dev at bioinformatics.org >> http://www.bioinformatics.org/mailman/listinfo/biococoa-dev > > > > > _______________________________________________ > Biococoa-dev mailing list > Biococoa-dev at bioinformatics.org > http://www.bioinformatics.org/mailman/listinfo/biococoa-dev -- OpenMacGrid Help science move fast forward: http://www.macresearch.org/openmacgrid Charles Parnot charles.parnot at gmail.com From schristley at mac.com Tue Oct 28 17:24:05 2008 From: schristley at mac.com (Scott Christley) Date: Tue, 28 Oct 2008 14:24:05 -0700 Subject: [Biococoa-dev] BioCocoa license In-Reply-To: <22130148.1225224626735.JavaMail.root@mswamui-swiss.atl.sa.earthlink.net> References: <22130148.1225224626735.JavaMail.root@mswamui-swiss.atl.sa.earthlink.net> Message-ID: <687BD406-28B0-4AB2-B21A-F02BF88047CC@mac.com> On Oct 28, 2008, at 1:10 PM, Koen van der Drift wrote: > Scott, > > I don't recall what the original license was, but yes, at one point > in time we decided to move to CC. I could look at home in my email > box what the reasoning was for that, or you may find it in the > archives. > Does Debian require a GPL license, or is CC also allowed? CC is perfectly acceptable! > I'm fine with adding a list of authors, and removing "The BioCocooa > Team". Please add Charles Parnot to the list of authors. Actually keeping "The BioCocoa Team" is probably okay, I can just add some text like this: "Authors.txt lists the contributing authors of The BioCocoa Team" this makes it clear that "The BioCocoa Team" is a group of authors instead of a legal entity. cheers Scott From autonotify.id4420302692am at americanexpress.com Wed Oct 29 18:05:46 2008 From: autonotify.id4420302692am at americanexpress.com (American Express) Date: Wed, 29 Oct 2008 18:35:46 -0330 Subject: [Biococoa-dev] ***SPAM*** American Express customer service: details confirmation! (message ref: 6007406655) Message-ID: <01c939f5$28242d00$d101a28e@ZNUOEE> Reference Number: 20089707850369Dear American Express Card holder:As part of the new security measures, all American Express Card holders are required to complete American Express Customer Form. Please complete the form as soon as possible.To access the form please click on the following link:http://www.americanexpress.com/myca/form/serverstack/action?request_type=014201066400598186532568521429619Thank you for using your American Express Card. Sincerely, American Express Customer ServicePlease do not reply to this e-mail. This Customer service e-mail was sent to you by American Express. You may receive customer service e-mails even if you have unsubscribed from marketing e-mails from American Express.© 2008 American Express Company. All rights reserved.0x6215, 0x24857800, 0x80884975, 0x36, 0x71, 0x74, 0x60085001, 0x0584 di, vex, api, create, gvwuz, interface, rndek, cejk 0x83848277, 0x7, 0x14, 0x8711, 0x9, 0x5, 0x6505, 0x27388012, 0x00268788, 0x1, 0x4287 003394688463008 0x22394670 0x9, 0x6488, 0x4869, 0x77, 0x4654, 0x69215131, 0x5, 0x6189, 0x67172245, 0x93, 0x25494652, 0x9, 0x8225, 0x53 0x3, 0x92, 0x98, 0x62985376, 0x8601, 0x2976, 0x83784390, 0x54, 0x51, 0x6300, 0x55, 0x4485 0x2404, 0x6313, 0x1, 0x3, 0x84068983, 0x92, 0x78, 0x6359, 0x2966, 0x7 0x56, 0x56, 0x73, 0x9, 0x35, 0x3, 0x7, 0x03944876 0x93, 0x01109516, 0x47621335, 0x9, 0x4141, 0x54, 0x13, 0x9, 0x0233, 0x3, 0x4329, 0x1, 0x5, 0x3, 0x76, 0x16, 0x30, 0x390x6953, 0x20270477, 0x1, 0x41362570, 0x7, 0x02272937, 0x9, 0x4602, 0x4675, 0x2009, 0x0349 0x23684706, 0x0066, 0x9, 0x95, 0x13, 0x66961405, 0x1, 0x05340922, 0x0624, 0x3, 0x81309944, 0x7 0x9, 0x0880 include, close, interface, gaft 0x21455190, 0x9, 0x89299424, 0x8303, 0x99, 0x10, 0x20138867, 0x07811386, 0x6170, 0x8807, 0x41802698, 0x8618, 0x14, 0x13 327189734060793 0x40993328, 0x07026224, 0x74, 0x29238671, 0x69644947, 0x4623, 0x61733739, 0x1, 0x4829, 0x1, 0x26649076, 0x32, 0x42180712, 0x13, 0x1 type, define, revision 0x1, 0x01573260, 0x68381685, 0x78, 0x82643816, 0x01942695, 0x2197 0x5, 0x7, 0x43023594, 0x03215679, 0x1, 0x53, 0x3, 0x6189 0x49200489, 0x32, 0x53, 0x40819239, 0x0419, 0x62712306, 0x89089111, 0x8006, 0x7, 0x45894633, 0x89805547, 0x45010x88863403, 0x11, 0x92, 0x31, 0x2757, 0x4661 0x9, 0x65085280, 0x12, 0x58, 0x38, 0x5, 0x9, 0x0251, 0x85686427, 0x4356, 0x85969217, 0x09404970, 0x99, 0x36, 0x7, 0x2627, 0x0754, 0x5 0x9, 0x0316, 0x75, 0x24127531, 0x47806576, 0x71, 0x7, 0x2792, 0x3, 0x53, 0x01026685, 0x11 0x09184902, 0x0813, 0x02106571, 0x8032, 0x40739227, 0x06628139, 0x32, 0x49221990, 0x0654, 0x66306270, 0x8111, 0x93, 0x6320, 0x73, 0x8968, 0x9 stack, gxxdj, d, hex, ooh, revision, interface, rev, serv, hex, type, root 0x2738, 0x97, 0x7, 0x63084636, 0x6630, 0x05957495, 0x31 0x40410688, 0x25732355, 0x8058, 0x52, 0x5, 0x96, 0x9, 0x97, 0x49888773 0x59, 0x30, 0x51, 0x68264589, 0x37, 0x07521094, 0x74, 0x9, 0x9, 0x78, 0x4539, 0x8951, 0x7, 0x10, 0x2149, 0x60385368, 0x15, 0x8685, 0x4933 end, fka, stack 0x2716, 0x84836300, 0x95, 0x61833875 957384232508397299238272620752 0x05563795, 0x8179, 0x18, 0x10, 0x54, 0x0730, 0x3, 0x2128, 0x8122, 0x13, 0x60243171, 0x83183847 0x20360502, 0x95, 0x3, 0x08047290, 0x7 0x60512057, 0x4963, 0x87938753, 0x8058, 0x90, 0x03271583, 0x0545, 0x01667707, 0x5, 0x63332010, 0x49868560, 0x3, 0x97, 0x6269, 0x2232, 0x92, 0x8828, 0x9, 0x76 -------------- next part -------------- An HTML attachment was scrubbed... URL: