I think the code for the Rosetta algo is available on SourceForge, but do not know if it is parallelized. Hope this helps --- biodevelopers-request at bioinformatics.org wrote: > Send Biodevelopers mailing list submissions to > biodevelopers at bioinformatics.org > > To subscribe or unsubscribe via the World Wide Web, > visit > > https://bioinformatics.org/mailman/listinfo/biodevelopers > or, via email, send a message with subject or body > 'help' to > biodevelopers-request at bioinformatics.org > > You can reach the person managing the list at > biodevelopers-admin at bioinformatics.org > > When replying, please edit your Subject line so it > is more specific > than "Re: Contents of Biodevelopers digest..." > > > Today's Topics: > > 1. rosetta (Jaroslaw Zola) > 2. Re: Gen DNA sequences (ledaval at ibb.unesp.br) > > --__--__-- > > Message: 1 > Date: Mon, 28 Jul 2003 13:05:49 +0200 (CEST) > From: Jaroslaw Zola <zola at icis.pcz.czest.pl> > To: Biodevelopers <biodevelopers at bioinformatics.org> > Subject: [Biodevelopers] rosetta > Reply-To: biodevelopers at bioinformatics.org > > Hi - I'm looking for some good papers on Rosetta > Algorithm. Does anybody > know if there exists parallel implementation of > Rosetta? > > Regards, > > j.zola > > -- > =2E........................................................................= > =2E.. > Jaros=B3aw =AFola=09=09 Instytut Informatyki > Teoretycznej i Stosowanej > tel/fax: (034) 3250589=09 =09 > Politechnika Cz=EAstochowska > zola at icis.pcz.czest.pl=09=09=09 D=B1browskiego 73, > 42-200 Cz=EAstochowa > =2E........................................................................= > =2E.. > > > --__--__-- > > Message: 2 > Date: Mon, 28 Jul 2003 12:44:55 -0300 (BRT) > Subject: Re: [Biodevelopers] Gen DNA sequences > From: <ledaval at ibb.unesp.br> > To: <biodevelopers at bioinformatics.org> > Reply-To: biodevelopers at bioinformatics.org > > HI, > if you go to nucleotide at NCBI and put the name of > the genes you are > interested in you will find the sequences of these > genes with introns and > exons to the majority of them. You can also enter in > Sanger > (http://www.sanger.ac.uk). You will find usefull > information there too. > > Leda Isabel de Castro Valente Esteves > PhD student > Genetics Department > IBB - UNESP > Brazil > > > Hello, > > > > I'm a PhD student at Valencia, Spain. I'm working > in pattern > > recognition techniques applied to bioinformatic. > > > > I'm searching at SRS and NCBI pairs of genes > sequences and their > > protein trancripted associated sequences. > > > > The problem is that I get the mRNA sequences or > sequences of a full > > chromosome but not a piece of DNA sequeces with > the protein associated, > > with introns and other subsequences. > > > > Do you know how to get it or a database with this > kind of information? > > > > Best regards, > > Juan Miguel Garcia > > > > > > _______________________________________________ > > Biodevelopers mailing list > > Biodevelopers at bioinformatics.org > > > https://bioinformatics.org/mailman/listinfo/biodevelopers > > > > > > --__--__-- > > _______________________________________________ > Biodevelopers mailing list > Biodevelopers at bioinformatics.org > https://bioinformatics.org/mailman/listinfo/biodevelopers > > > End of Biodevelopers Digest ===== ================================================================= Al Henry (408) 799-9404 cell allen_777 at yahoo.com __________________________________ Do you Yahoo!? Yahoo! SiteBuilder - Free, easy-to-use web site design software http://sitebuilder.yahoo.com