[Biodevelopers] CLUSTAL specification

Joseph Landman landman at scalableinformatics.com
Fri Jun 6 14:52:09 EDT 2003


I didn't find the format description, but I found some parsers:

http://doc.bioperl.org/releases/bioperl-1.2/ talks about how to create a
Bio::AlignIO object to read/write the .aln format.

There are similar parsers for Bio::Java and Bio::Python.  Worst case,
you could reverse engineer it from the parsers.

Joe

On Fri, 2003-06-06 at 14:32, Jaroslaw Zola wrote:
> Hi Joseph, thanks for really fast answer.
> I am interested in output (the .aln file - self explanatory). 
> 
> Regards, 
> 
> j.zola
> 
> --
> ............................................................................
> Jaroslaw Zola		      Instytut Informatyki Teoretycznej i Stosowanej
> tel/fax: (034) 3250589	                	  Politechnika Czestochowska
> zola at icis.pcz.czest.pl			 Dabrowskiego 73, 42-200 Czestochowa
> ............................................................................
> 
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-- 
Joseph Landman <landman at scalableinformatics.com>




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