Has anyone worked with the new set of sequences in the COG database? It seems that, unlike the old one, there is no direct way to download sequences specific to a COG. On ftp, there is a file called whog which contains information on each COG and a file called myva which is a FASTA file containing all the proteins from the genomes in the new COG db. In the old COG db, it was possible to download FASTA sequences for each COG but I cant seem to find the same tool for the new set. I can work around this, but I was just wondering if anyone knows of anyway to do this faster? thanks