[Biodevelopers] anyone following the iPlant challenge?

[Mike Marchywka]

I don't know if it has to be something specific to plants- what areas are being neglected?
I guess you could think about things like photoreactions or root systems but I'm
not really sure what they hope to address that isn't being attacked in academic or
commercial labs. 

I was looking for an excuse to make a cavity database but not sure how it would
apply to this opportunity. That is, map out the shape and gross chemical environment 
inside cavities from a database of pdb files and put them into a new database but I never checked
to see what is available etc.


Mike Marchywka 586 Saint James Walk Marietta GA 30067-7165 404-788-1216 (C)<- leave message 989-348-4796 (P)<- emergency only marchywka at hotmail.com Note: If I am asking for free stuff, I normally use for hobby/non-profit
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Note: Hotmail is possibly blocking my mom's entire ISP - try  me on marchywka at yahoo.com if no reply here. Thanks.

----------------------------------------
> Date: Thu, 17 Apr 2008 10:36:10 -0700
> From: marty.gollery at gmail.com
> To: biodevelopers at bioinformatics.org
> Subject: Re: [Biodevelopers] anyone following the iPlant challenge?
>
> Yes, plant pathogens would definitely be considered a major area.
>
> Others might be uncovering the genes related to drought tolerance,
> salt, heat and cold stress and understanding their functions.
>
> best regards,
> Marty
>
> On Wed, Apr 16, 2008 at 2:47 PM, Mike Marchywka <marchywka at hotmail.com> wrote:
> >
> >
> > http://www.nature.com/news/2008/080416/full/452793b.html
> >
> > "Plant biologists were offered a dream ticket last week: US$50 million to address the biggest challenges in their field. But the money comes with a catch. It can't be used to generate new data, only to create user-friendly computational tools. And, perhaps hardest of all, researchers have to persuade others in the field to collaborate on how to spend the funds.
> > "
> >
> > Personally, I'd be interested in tools for finding a rapid response to emerging pathogens.
> > Ug99 comes to mind. Not entirely sure what all this would include however.
> >
> >
> >
> > Mike Marchywka
> > 586 Saint James Walk
> > Marietta GA 30067-7165
> > 404-788-1216 (C)<- leave message
> > 989-348-4796 (P)<- emergency only
> > marchywka at hotmail.com
> > Note: If I am asking for free stuff, I normally use for hobby/non-profit
> > information but may use in investment forums, public and private.
> > Please indicate any concerns if applicable.
> > Note: Hotmail is possibly blocking my mom's entire
> > ISP - try me on marchywka at yahoo.com if no reply
> > here. Thanks.
> >
> >
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>
>
> --
> --
> Martin Gollery
> Senior Bioinformatics Scientist
> TimeLogic- a Division of Active Motif
> 775-833-9113
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>
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