Sean, I'm now registered as user "flipmozart" at bioinformatics.org. Kindly add me to the list of developers. Some quickie replies: >B.t.w what a relief to write and read about stuff that matters! HAHAHAHAHAHAHAHAhahaahahahahaahahaha!!!! =) On the Parser class issue, I haven't really waded deep into the code. However, by just reading the discussion so far, it *SEEMS* the Parser class isn't far off from the IO class, and may only differ in name and in scope/granularity. May I suggest renaming it from "Parser class" to some other name that is more "data-centric"? I'll explain why later. Btw, I have a question for Sean. I've written an Amateur Gene Finder demo script at: http://genephp.sourceforge.net/genefind_par.html I'd like to make the protein sequences (e.g. GAVLIFYW) "clickable", so that it forwards the string as a query to protein database sites like PROSITE, get info on it, an display this info in another PHP page WITHOUT ever leaving the SF site. My practical question is: can you eSearch/eUtils do this (or be easily modified to do this)? Also, Sean's suggestion re: org structure is fine except that GenePHP as originally conceived is not be limited to "genes". The term was coined to avoid conflicts with biophp.org. However, I see nothing wrong with the project getting known as giving special emphasis on DNA and proteins, and being under the umbrella of a larger BioPHP project, hosted/administered here by you. Lastly, to show that this is a team effort, I've revised the SF site to make greater use of the word "PROPOSED" as in "Proposed GenePHP Bioinformatics Concept Map". I do not want to convey the impression that they are FINAL or CLOSED to discussion. Regards, Serge Need a new email address that people can remember Check out the new EudoraMail at http://www.eudoramail.com