On Tuesday 03 June 2003 10:31 am, Nico Stuurman wrote: > I'll try them out. It might be a good idea to include some 'test' > scripts`, as a demonstration/test of the functionality of the library > and as a starting point for people to write their own scripts. Ah, good idea - I actually have a really simple test script for esearch/esummary, but I see I never bothered to upload it for everyone else. I'll get test scripts for those added to CVS today sometime as well. Haven't tested them yet, but I've uploaded my work from yesterday into sean/semi-official (updated xml parser is in sean/semi-official/support_modules - still need to figure out where these modules fit in the genephp scheme of things so I can move them.) > Actually, if you want to try to have a go at the basis of the > seqIOWrite section, that would be great. I am very busy doing real > biology right now, and I doubt I will get started soon on that part.. Will do - that sort of thing will be easy to work on while I'm on the road without an internet connection, so long as I remember to bring example data and format specification documents with me. Serge - will you be doing any work on the seq object over the next 7-10 days or so? If not, I can also e.g. add interface methods and perhaps one or two other functions while I'm on the road and upload the changes when I get back. Still have a lot of preparation to do for the trip, but I hope to be able to finish up a few more things (e.g. testing and NCBI BLAST results parser) before I leave tomorrow. Sean