[Biophp-dev] Swissprot and Genbank parsers done

biophp-dev@bioinformatics.org biophp-dev@bioinformatics.org
Sat, 10 May 2003 22:30:34 PDT


I just finished editing Serge's Genbank and Swissprot parsers to work on
our new approach.  They seem to be doing what they are supposed to be
doing.  More rigurous testing would be nice.  Also, we might have to look 
carefully at the structure of the output and do some work on seq_factory
to 'translate' the datastructures better.  Nevertheless, five sequence
file formats down!  

Shall we call the current Parse class: IOseq->read?  (and start working
on IOseq->write?)

Best,


Nico