[cd-hit-l] problem in psi-cd-hit.pl

Dan Bolser dan.bolser at gmail.com
Fri Apr 13 09:53:02 EDT 2007


Hello!

What are you trying to do?

I am not familiar with those tools, so I wonder if you really need them.

Did you read the manual yet?

Dan.

On 13/04/07, Pankaj <pankaj at nii.res.in> wrote:
> > Hi all,
> > I have downloaded cd-hit and compiled it on linux system by
> > gunzip and untar and "make".
> >
> > When I use psi-cd-hit-local.pl, I get the following message
> > Name "main::restart_seg" used only once: possible typo at ./psi-cd-
> > hit.pl line 62. Name "main::script_name" used only once: possible
> > typo at ./psi-cd-hit.pl line 3. Name "main::reformat_seg" used only
> > once: possible typo at ./psi-cd-hit.pl line 65. No input at .//psi-
> > cd-hit-local.pl line 98.
> >
> > When I use psi-cd-hit.pl, I get the message:
> > Name "main::restart_seg" used only once: possible typo at ./psi-cd-
> > hit.pl line 62. Name "main::script_name" used only once: possible
> > typo at ./psi-cd-hit.pl line 3. Name "main::reformat_seg" used only
> > once: possible typo at ./psi-cd-hit.pl line 65. No input at .//psi-
> > cd-hit-local.pl line 98.
> >
> > I have downloaded BLAST and installed it on my computer.
> >
> > What could be the problem?
> >
> > Thanking all in advance,
> > Pankaj Khurana
> >
>
>
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