<div><br></div>thanks for the hint on dropping the www. ... <br><br><div class="gmail_quote">---------- Forwarded message ----------<br>From: <b class="gmail_sendername">Michael Lappe</b> <span dir="ltr"><<a href="mailto:drmlappe@googlemail.com">drmlappe@googlemail.com</a>></span><br>
Date: Fri, Nov 4, 2011 at 9:52 AM<br>Subject: Fwd: CMView/MacPyMOL crashes<br>To: <a href="mailto:cmview-devel@www.bioinformatics.org">cmview-devel@www.bioinformatics.org</a><br><br><br><div><br></div>Since I am not sure the cmview-output and the log-file were included, I'm forwarding Thomas report again. <div>
Also to see if the server works again & accepts mails ;) </div><div>best wishes .\\ichael <div><div></div><div class="h5"><br>
<br><div class="gmail_quote">---------- Forwarded message ----------<br>From: <b class="gmail_sendername">lappe</b> <span dir="ltr"><<a href="mailto:drmlappe@googlemail.com" target="_blank">drmlappe@googlemail.com</a>></span><br>
Date: Tue, Nov 1, 2011 at 1:31 PM<br>
Subject: Fwd: CMView/MacPyMOL crashes<br>To: <a href="mailto:cmview-devel@www.bioinformatics.org" target="_blank">cmview-devel@www.bioinformatics.org</a><br>Cc: <a href="mailto:thomas.hopf@gmail.com" target="_blank">thomas.hopf@gmail.com</a><br>
<br><br>
<div style="word-wrap:break-word"><div><br></div>Dear all -<div><br></div><div>finally I am getting near the bottom of the pile - </div><div>sorry for not forwarding / responding earlier (mea culpa) </div><div><br></div>
<div>
I couldn't reproduce the error Thomas mailed me -</div><div>but I am running cmview 1.1.rc6 with pymol 1.2r2 </div><div>so is the new pymol the cuplprit? </div><div><br></div><div>A wild guess would be that the feature of highlighting the </div>
<div>current contact in the 3D view creates a memory problem/leak in pymol ... </div><div>just don't know if there's a simple switch in cmview-config file to turn that off. <br><div><br></div><div>hope that helps with bugtracking, cheers .\\ichael </div>
<div><br><div>Begin forwarded message:</div><br><blockquote type="cite"><div style="margin-top:0px;margin-right:0px;margin-bottom:0px;margin-left:0px"><span style="font-family:'Helvetica';font-size:medium"><b>From: </b></span><span style="font-family:'Helvetica';font-size:medium">Thomas Hopf <<a href="mailto:thomas.hopf@gmail.com" target="_blank">thomas.hopf@gmail.com</a>><br>
</span></div><div style="margin-top:0px;margin-right:0px;margin-bottom:0px;margin-left:0px"><span style="font-family:'Helvetica';font-size:medium"><b>Date: </b></span><span style="font-family:'Helvetica';font-size:medium">September 26, 2011 6:52:28 PM GMT+02:00<br>
</span></div><div style="margin-top:0px;margin-right:0px;margin-bottom:0px;margin-left:0px"><span style="font-family:'Helvetica';font-size:medium"><b>To: </b></span><span style="font-family:'Helvetica';font-size:medium">Michael Lappe <<a href="mailto:drmlappe@googlemail.com" target="_blank">drmlappe@googlemail.com</a>><br>
</span></div><div style="margin-top:0px;margin-right:0px;margin-bottom:0px;margin-left:0px"><span style="font-family:'Helvetica';font-size:medium"><b>Cc: </b></span><span style="font-family:'Helvetica';font-size:medium"><a href="mailto:deboramarks@gmail.com" target="_blank">deboramarks@gmail.com</a><br>
</span></div><div style="margin-top:0px;margin-right:0px;margin-bottom:0px;margin-left:0px"><span style="font-family:'Helvetica';font-size:medium"><b>Subject: </b></span><span style="font-family:'Helvetica';font-size:medium"><b>CMView/MacPyMOL crashes</b><br>
</span></div><div><div></div><div><br><div>Dear Dr Lappe,<br><br>thanks for providing the CMView software, it is really good and useful. However, I have some trouble using it because it crashes frequently.<br><br>
The crash occurs 100% reproducibly after some time (few minutes), in which I do nothing else but selecting some of the contacts in CMView and rotating the protein in MacPymol. At some point, MacPymol crashes and the CMView process has to be killed because it puts the CPU under heavy load. I attached both the console output by CMView 1.1.1 and the log given by MacOS 10.6.8 upon MacPymol 1.3 crashing.<br>
<br>Hope this helps in identifying the problem.<br><br>Best wishes,<br>Thomas Hopf<br><br>Am 26.09.11 11:38, schrieb Debora Marks:<br><blockquote type="cite">Micheal<br></blockquote><blockquote type="cite"><br></blockquote>
<blockquote type="cite">Hi there !!<br></blockquote><blockquote type="cite"><br></blockquote><blockquote type="cite"> You may want to re-login to the web page I gave you a while back to see the updated paper and supplement. Its really changed so I recommend it<br>
</blockquote><blockquote type="cite"><br></blockquote><blockquote type="cite">In the meanwhile, Thomas, a student of mine, is having some 'crashing ' issues with CMView ( which is GREAT) and will drop you a line about it<br>
</blockquote><blockquote type="cite"><br></blockquote><blockquote type="cite">Debbie<br></blockquote><br></div></div></div></blockquote></div></div></div><br><div style="word-wrap:break-word"><div><div><blockquote type="cite">
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