[Molvis-list] exporting _good_ h-bonds (was: export Chime h-bonds)

Kevin Karplus karplus at soe.ucsc.edu
Tue Jan 3 02:19:32 EST 2006

Rasmol's hbond determination is truly terrible.
Stride's is adequate for the purpose for determinining secondary
structure, though I believe it looks only for  backbone H-bonds, as
sidechain H-bonds are irrelevant for its purposes.

If you just want backbone H-bonds, the DSSP program does a decent job
of reporting them, without any need to hack the program.

Kevin Karplus

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