[Molvis-list] Docking in Rasmol?

Kevin Karplus karplus at soe.ucsc.edu
Fri Apr 14 14:24:14 EDT 2006

I would favor having rasmol do as little to the coordinates as
possible---turn off the recentering by default, since it only takes
one command to recenter, but there is no way to recover from recentering.

Being able to hand-dock ligands and multimers would be a great
advantage in protein structure prediction and protein design.
Loading the ligands from separate files then outputing the complex as
a single file would be very useful.

Kevin Karplus 	karplus at soe.ucsc.edu	http://www.soe.ucsc.edu/~karplus
Professor of Biomolecular Engineering, University of California, Santa Cruz
Undergraduate and Graduate Director, Bioinformatics
(Senior member, IEEE)	(Board of Directors & Chair of Education Committee, ISCB)
life member (LAB, Adventure Cycling, American Youth Hostels)
Effective Cycling Instructor #218-ck (lapsed)
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