[Molvis-list] Drop in use of this list

Dan Bolser dmb at mrc-dunn.cam.ac.uk
Thu Sep 7 10:58:58 EDT 2006


Eric Martz wrote:
> Dear MolVis-List Subscribers,
> 
> During 1996-2004, this list averaged 1.15 messages/day (420/year, range 
> 352-526). There was no trend in traffic despite the fact that in the 
> first few years, there were less than half as many subscribers.
> 
> Last year, the traffic dropped to 1/3 of the previous level (132 in 
> 2005, 0.36/day). In the first half of 2006, there were 89 messages 
> (about 0.5 messages/day).
> 
> The number of subscribers plateaued at about 600 from 2001 through 2004, 
> but has now grown to 740.
> 
> I suspect that the dizzying level of traffic on the jmol-users list, and 
> the well-justified excitement about Jmol, has diverted some traffic from 
> molvis-list. I myself am working more and more with Jmol.
> 
> Of course, modest traffic is not necessarily bad, especially if the 
> quality of, and interest in message content is high.
> 
> As a reminder, quoting from our website 
> (http://bioinformatics.org/mailman/listinfo/molvis-list):
> 
> "Molvis-list is for discussion of molecular visualization software, 
> especially free software and its uses in education, such as MDL Chime, 
> Protein Explorer, and RasMol, among many. Technical questions, "How do I 
> ...", comparisons between software packages, or questions about pros and 
> cons, are welcome. Discussions may include molvis packages that have 
> their own dedicated email lists, such as Jmol or DeepView, although 
> technical questions about those packages should be sent to their 
> dedicated lists. Discussions may also include commercial molvis software 
> packages.
> 
> Subscribers with commercial affiliations are welcome. Advertising is 
> prohibited, but occasional, brief, low-key announcements of commercial 
> products of interest to the subscribership are welcome, as are 
> announcements of relevant meetings, positions available or sought."
> 
> Feel free to use this list! Ideas to increase the usefulness of this 
> list are welcome!
> 
> I'd like to extend my heartfelt appreciation to Tim Driscoll, who has 
> kindly taken over the day to day maintenance of this list on a volunteer 
> basis for the past couple of years. His work consists mostly of deleting 
> spam, thereby sparing us from all receiving it -- so I'm sure you 
> appreciate him too!

How much spam gets through the members list? (Or is this an 'anyone can 
post' list?)



I wonder if anyone can tell me how to select only the 'aligned' residues 
in pymol after running the 'align x, y' command?

I see that atoms (and distinct residues?) are rejected during the 
alignment, but how can I 'see' them?

Cheers,

Dan.



> -Eric (who founded this list in 1995)
> 
> 
> /* - - - - - - - - - - - - - - - - - - - - - - - - - - -
> Eric Martz, Professor Emeritus, Dept Microbiology
> U Mass, Amherst -- http://www.umass.edu/molvis/martz
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