[Owl-devel] Fwd: [DAS] PDB-Uniprot alignment sources

Dan Bolser dan.bolser at gmail.com
Thu Jul 1 06:59:05 EDT 2010


---------- Forwarded message ----------
From: Rafael Jimenez <rafael at ebi.ac.uk>
Date: 1 July 2010 11:19
Subject: [DAS] PDB-Uniprot alignment sources
To: das at biodas.org
Cc: pdbhelp at ebi.ac.uk

Hi everybody,

For those of you interested to use a PDB-Uniport alignment/mapping DAS
source. As far as I remember the registry has referenced in total three
PDB-Uniprot alignment sources. "biojavapdbuniprot" stopped working around
October 2009 and "alig_pdb_sp" stooped working in June 2010. Andreas set up
a new PDB-Uniport alignment source in November 2009 named
"pdb_uniprot_sifts_mapping" which is a replacement for the previous ones.

You can find more details about this mapping server in the DAS registry ...

Thanks to Andreas for maintaining this useful server.

Best regards,
DAS mailing list
DAS at lists.open-bio.org

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