[Pdbwiki-devel] PDB version 4

Dan Bolser dan.bolser at gmail.com
Mon Aug 1 05:10:43 EDT 2011

On 1 August 2011 10:08, Henning Stehr <stehr at molgen.mpg.de> wrote:
> Hi Jose,
> great find. That must be exactly what we need. Unfortunately, I don't


> -date 20110722 = do the update with the given timestamp by grabbing
> the respective file from ftp (we could run this manually, in case we
> missed an auto-update)

Ahh... are all the old files logged? In that case, its easier for us
(assuming the PDB don't make any errors).

> Does that make sense?

Seems like a good strategy.

> Henning
> On Mon, Aug 1, 2011 at 10:42 AM, Jose M. Duarte <jose.m.duarte at gmail.com> wrote:
>> Hi guys
>> I've just come by this status directories in the PDB ftp:
>> ftp://ftp.wwpdb.org/pub/pdb/data/status/
>> They seem to contain the weekly changes in 3 files: added.pdb, obsolete.pdb,
>> modified.pdb. Well or at least that's what it seems to be, I couldn't really
>> check if it has exactly that or something else.
>> Do you guys remember ever using that? or do you know anything about it? I
>> mean that should provide the weekly diff lists that we would need for
>> incremental loading. Wouldn't it?
>> Jose
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