[Pdbwiki-devel] taking and updating wikipedia genes to PDBwiki

Dan Bolser dan.bolser at gmail.com
Mon Dec 26 11:06:41 EST 2011


23rd looks OK for me provisionally.

I'd love to attend another bioconference, but it seems a long way to
go just to talk about PDBWiki!

Could be really fun though!

On 25 December 2011 16:32, Jong Bhak <jongbhak at yahoo.com> wrote:
> Hi,
>
> I fully agree.
> Can you come to Korea on 23rd Feb?
> I have the second bioconference and you
> can talk about it.
>
> Take care
>
>
>
> Jong Bhak,
>
> \(^o^)/
> Tel: 031-888-9311, Fax: 031-888-9314, Mobile: 010 9944 6754
>
> From: Dan Bolser <dan.bolser at gmail.com>
> To: Jong Bhak <jongbhak at gmail.com>
> Cc: pdbwiki-devel at bioinformatics.org
> Sent: Sunday, December 25, 2011 11:28 PM
> Subject: Re: taking and updating wikipedia genes to PDBwiki
>
> Wow, two years have passed already, and I haven't looked at doing any of
> this! We need an international PDBWiki week once a year to focus our
> attention!
> Maybe some time in March?
> Happy Christmas!
> Dan.
> On 27 Dec 2010 04:05, "Jong Bhak" <jongbhak at gmail.com> wrote:
>
> Thanks. Also, Jmol on the site will be good. To turn them
> around a bit.
> Cheers
>
> Jong
>
>
>
>
>
>
>
>
> On Mon, Dec 27, 2010 at 6:56 AM, Dan Bolser <dan.bolser at gmail.com> wrote:
>
> Hi Jong,
>
> Yup, all this is possible. I like the idea to add links to Wikipedia
> from PDBWiki.
>
> We do have the EC terms in PDBWiki as categories, but we didn't add GO
> because its a 'different kind of category'... for this we were
> thinking of developing PDBWiki using the functionality of Semantic
> MediaWiki, but we haven't really worked out how to do that 'properly'.
> I guess we should rather do it piecemeal and see what works?
>
>
> Happy X-mass and new-year to you too!
>
>
> Dan.
>
> On 26 December 2010 16:47, Jong Bhak <jongbhak at gmail.com> wrote:
>> Hi Dan,
>>
>> Can you copy wikipedia's gene and protein names that appear in PDBwiki
>> and actually store them in PDBwiki? And make a script that automates
>> the text every month?
>>
>> Also, can you add Wikipedia's link to PDB entries under Links section?
>>
>> Also, can you make a fuctional category in PDBwiki using GO?
>> and put lists of genes/proteins in the category so that I can
>> browser functionally linked 3D domains with annotated information?
>>
>> Thanks
>>
>> Happy new year!
>> Jong
>>
>>
>>
>>
>>
>>
>
>
>
>


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