[Pdbwiki-devel] PDB version 4

Dan Bolser dan.bolser at gmail.com
Thu Jul 28 07:39:53 EDT 2011

On 28 July 2011 11:56, Jose M. Duarte <jose.m.duarte at gmail.com> wrote:
>> IIRC, the 'loader' also supports a delete command, where you pass it a
>> list of PDB entries to delete. We just need to work out how to
>> generate the list of files to delete (and then update) without
>> recourse to the file time stamps (which is what we use currently
>> IIRC).
> Indeed there was a "delete entry" option! It seems that Henning implemented
> it in the batch runner. The weird thing is that in the delete method from
> the original code no records were being deleted from the db because the
> execute statement call was missing! So I fixed that one and now it seems to
> be working.

Excellent! Would you mind writing a paragraph on your fixes (once
we're done) and sending it to the openmms users  mailing list?


>> Once we have a reliable way to generate the list of deletes, updates,
>> and additions, we can then pass those to the loader appropriately.
> Can those be taken from rsync somehow?

That rings a bell... Isn't there an sh script that parses the rsync
log to generate some printouts?


> Jose

More information about the Pdbwiki-devel mailing list