[Proteopedia] Getting unremediated PDB files: NOW WORKING
Eric Martz
emartz at microbio.umass.edu
Mon Mar 30 18:23:14 EDT 2009
>OK, both the pre-remediation snapshots are working. The trick is
>that the 2007 files are .Z compressed, while the 2009 files are .gz
>compressed. (True, this is stated in the ftp help files!) Thus to get 1lbg:
BEFORE 2007 REMEDIATION
>ftp://snapshots.wwpdb.org/20070731/pub/pdb/data/structures/all/pdb/pdb1lbg.ent.Z
BEFORE 2009 REMEDIATION
>ftp://snapshots.wwpdb.org/20090316/pub/pdb/data/structures/all/pdb/pdb1lbg.ent.gz
I have revised my convenience page for getting July 31, 2007
unremediated files:
http://proteinexplorer.org/unremed.htm
and it now works again. This is primarily for obtaining DNA before
the residues were re-named DC, DG, DT, DA, for Protein Explorer/Chime.
-Eric
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