[Proteopedia] using pre-prepared PNGJ file in Proteopedia
Jaime Prilusky
jaime.prilusky at weizmann.ac.il
Thu Dec 10 14:30:33 EST 2015
Dear Angel,
Drag and drop a PNGJ file on the JSmol applet of SAT.
Let me know how it goes, since here might be a conflict when saving the internal structure file, at the time of saving the new scene.
Eventually, we can try to implement the missing pieces.
Jaim
__
Dr Jaime Prilusky
R&D Bioinformatics and Data Management
mail: Jaime.Prilusky at weizmann.ac.il
OCA, http://oca.weizmann.ac.il (the protein structure/function database)
Proteopedia, http://proteopedia.org (because life has more than 2D)
> On 9 Dec 2015, at 7:12 PM, Angel Herráez <angel.herraez at uah.es> wrote:
>
> Dear Proteopedians,
>
> I am interested on the possibility of uploading and using in Proteopedia a file
> prepared in Jmol application and saved to the PNGJ format.
>
> These files have a PNG extension. I tried uploading to Proteopedia, it is seen
> as an image (ok), then I create a scene and choose that "image" as the
> source of molecule.
> JSmol loads it and finds the internal pdb or mol file, however the customized
> style, color, orientation, contained in the PNGJ file is lost since SAT applies
> its own default rendering.
>
> So my question: is there a way to preserve the custom style (state script
> saved as part of the PNGJ file) and avoid the default Proteopedia/SAT
> styling?
>
> Thans for any hints,
>
> Angel
>
>
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