[ssml] HMM fro SCOP domain families.

Kevin Karplus karplus at soe.ucsc.edu
Mon Sep 27 13:54:05 EDT 2004


Goel, Manisha wrote

> Is there any ready source of getting the HMM profile for SCOP domain
> families ?

Yes, that is the SUPERFAM family of HMM models.

http://supfam.mrc-lmb.cam.ac.uk/SUPERFAMILY/
(or http://supfam.org )

------------------------------------------------------------
Kevin Karplus 	karplus at soe.ucsc.edu	http://www.soe.ucsc.edu/~karplus
life member (LAB, Adventure Cycling, American Youth Hostels)
Effective Cycling Instructor #218-ck (lapsed)
Senior member, IEEE	Board of Directors, ISCB (starting Jan 2005)
Professor of Biomolecular Engineering, University of California, Santa Cruz
Undergraduate and Graduate Director, Bioinformatics
Affiliations for identification only.



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