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PyMsXML: Translate MS data to XML - Summary

bioinformatics software development :: PyMsXML: Translate MS data to XML

PyMsXML is a python script for converting vendor specific mass spectrometry data files from their proprietary binary format, to either of the emerging XML file formats for mass spectra: mzXML or mzData.

License: GNU General Public License

Public areas This project has many places for you to explore and participate. The icons displayed below are also available at the top of the page for easy navigation.  Project homepage This home page points to the official page for this project, which may or may not be hosted at Bioinformatics.Org.  Public forums There are now 2 messages in 2 forums  Bug tracking There are 0 open bugs, 0 total.  Mailing lists There are 0 public mailing lists.  Task manager There are 0 open, public tasks, 0 total.  Public surveys Surveys may be defined by the project administrator to gather user input about this project. CVS repository The CVS repository is a place for this project to store its source code. Members have access to change this master repository, while anonymous users may browse the most recent development version of this project. CVS Instructions Download directory Projects may choose to have files other than their main releases available via this directory.

Member information Project admins: nje01 Members: 1 [View members] File releases Module Name: Scripts Only Latest release is 0.5.4 View: [Release Notes & Changelog] Download: [zip] Module Name: Complete Latest release is 0.5.4 View: [Release Notes & Changelog] Download: [zip] [View all files] News Submit Archive PyMsXML 0.5.4 Released Submitted by Nathan Edwards; posted on Aug. 07, 2007 Minor update to PyMsXML released. * Bug-fix to support older versions of Data Explorer. * Support for Data Explorer files from chromatography protocols. * mzXML read/write improvements. Download from bioinformatics.org. nathan -- Nathan Edwards, Ph.D. Center for Bioinformatics and Computational Biology 3119 Biomolecular Sciences Bldg. #296 University of Maryland, College Park, MD 20742 Phone: +1 301-405-9901 Email: nedwards@umiacs.umd.edu WWWeb: http://www.umiacs.umd.edu/~nedwards PyMsXML 0.5.0 Released! Submitted by Nathan Edwards; posted on Nov. 08, 2006 Major update to PyMsXML released. Highlights: * Output to mzXML version 2.1, 2.2, or 3.0. * Compression of entire output file (gzip) or mzXML 3.0 peaks (zlib). * Peak detection of MS and/or MS/MS spectra using vendor libraries. * Filter scans to select only the ones you want. * Better support for multiple acquisitions (samples) in single QStar wiff file. * Reads mzXML file as input. Download from bioinformatics.org. nathan -- Nathan Edwards, Ph.D. Center for Bioinformatics and Computational Biology 3119 Biomolecular Sciences Bldg. #296 University of Maryland, College Park, MD 20742 Phone: +1 301-405-9901 Email: nedwards@umiacs.umd.edu WWWeb: http://www.umiacs.umd.edu/~nedwards Submit Archive