proba.DL {HAPim} | R Documentation |
The function calculates conditional probabilities of having Q allele given marker information due to linkage disequilibrium.
proba.DL(piQ.t0, esp.freq.hap, res.structure, pi.hap, res.corresp)
piQ.t0 |
frequency of Q allele at time t=0. |
esp.freq.hap |
results provided by esp.freq.hap() function, numeric vector. |
res.structure |
results provided by structure.hap() function, list of numeric objects. |
pi.hap |
provided by pi.hap() function, list of numeric objects. |
res.corresp |
results provided by corresp() function, list of 2 numeric objects. |
The returned value is a numeric vector of length=number of individuals which contains conditional probabilities of having Q allele given marker information due to linkage disequilibrium.
S. Dejean, N. Oumouhou, D. Estivals, B. Mangin
publication to be submitted: C. Cierco-Ayrolles, S. Dejean, A. Legarra, H. Gilbert, T. Druet, F. Ytournel, D. Estivals, N. Oumouhou and B. Mangin. Combining linkage analysis and linkage disequilibrium for QTL fine mapping in animal pedigrees.
esp.freq.hap
, structure.hap
, pi.hap
, corresp