retrouve.all {HAPim} | R Documentation |
The function finds alleles of the associated haplotype. It can be viewed as an internal function. The user does not have to call it by himself.
retrouve.all(assoc, res.structure, all.marq)
assoc |
numeric value, associated haplotype. |
res.structure |
results provided by structure.hap() function, list of objects. |
all.marq |
results provided by allele.marq() function, list of alleles for each marker. |
The returned value is a character which corresponds to the concatenation of alleles of the associated haplotype.
S. Dejean, N. Oumouhou, D. Estivals, B. Mangin
publication to be submitted: C. Cierco-Ayrolles, S. Dejean, A. Legarra, H. Gilbert, T. Druet, F. Ytournel, D. Estivals, N. Oumouhou and B. Mangin. Combining linkage analysis and linkage disequilibrium for QTL fine mapping in animal pedigrees.