obj.LD.add.H0 {HAPim}R Documentation

log-likelihood value of HAPimLD method under H0

Description

The function calculates the log-likelihood value of HAPimLD method under hypothesis HO. It can be viewed as an internal function. The user does not have to call it by himself.

Usage

obj.LD.add.H0(perf, CD)

Arguments

perf numeric vector of length = number of individuals which contains the performances of individuals.
CD numeric vector of length=number of individuals which contains the CD of individuals. var(perf$_i$)=s/CD$^2_i$

Value

The returned value is the log-likelihood value of HAPimLD method under hypothesis HO.

Author(s)

S. Dejean, N. Oumouhou, D. Estivals, B. Mangin

References

publication to be submitted: C. Cierco-Ayrolles, S. Dejean, A. Legarra, H. Gilbert, T. Druet, F. Ytournel, D. Estivals, N. Oumouhou and B. Mangin. Combining linkage analysis and linkage disequilibrium for QTL fine mapping in animal pedigrees.


[Package HAPim version 1.3 Index]