obj.haplomax.add {HAPim}R Documentation

analysis of variance of the HaploMax method

Description

The function computes the regression analysis with a dose haplotype effect. It can be viewed as an internal function. The user does not have to call it by himself.

Usage

obj.haplomax.add(perf, CD, assoc, res.structure, pi.hap, cor.pere, cor.mere)

Arguments

perf numeric vector of length=number of individuals which contains the performances of individuals.
CD numeric vector of length=number of individuals which contains the CD of individuals. var(perf$_i$)=s/CD$^2_i$
assoc numeric value, associated haplotype.
res.structure results provided by structure.hap() function, list of objects.
pi.hap provided by pi.hap() function, list of numeric objects.
cor.pere provided by corresp() function, list of numeric objects.
cor.mere provided by corresp() function, list of numeric objects.

Value

The returned value is an object of aov class containing the dose haplotype regression.

Author(s)

S. Dejean, N. Oumouhou, D. Estivals, B. Mangin

References

publication to be submitted: C. Cierco-Ayrolles, S. Dejean, A. Legarra, H. Gilbert, T. Druet, F. Ytournel, D. Estivals, N. Oumouhou and B. Mangin. Combining linkage analysis and linkage disequilibrium for QTL fine mapping in animal pedigrees.

See Also

corresp, pi.hap, structure.hap,proba.DL


[Package HAPim version 1.3 Index]