obj.LDL.add.H0 {HAPim} | R Documentation |
The function calculates the log-likelihood value of the HAPimLDL method under hypothesis H0. It can be viewed as an internal function. The user does not have to call it by himself.
obj.LDL.add.H0(moyenne.pere, perf, CD, desc.pere)
moyenne.pere |
results provided by moyenne.pere() function, mean of half-sib family performances. |
perf |
numeric vector of length=number of individuals which contains the performances of individuals. |
CD |
numeric vector of length=number of individuals which contains the CD of individuals. var(perf$_i$)=s/CD$^2_i$ |
desc.pere |
results provided by descendant.pere() function, numeric matrix (number of sires x 2) which gives for each sire, the first and last indexes of its progeny. |
The returned value is the log-likelihood value of HAPimLDL method under hypothesis HO.
S. Dejean, N. Oumouhou, D. Estivals, B. Mangin
publication to be submitted: C. Cierco-Ayrolles, S. Dejean, A. Legarra, H. Gilbert, T. Druet, F. Ytournel, D. Estivals, N. Oumouhou and B. Mangin. Combining linkage analysis and linkage disequilibrium for QTL fine mapping in animal pedigrees.