proba.DL.diplotype {HAPim}R Documentation

probabilities due to linkage disequilibrium

Description

The function calculates probabilities due to linkage disequilibrium for a diplotype. It can be viewed as an internal function. The user does not have to call it by himself.

Usage

proba.DL.diplotype(DL.chrom1, DL.chrom2)

Arguments

DL.chrom1 results provided by proba.DL() function, numeric vector of length=number of individuals which contains probabilities due to linkage disequilibrium on the first chromosome given a genotype.
DL.chrom2 results provided by proba.DL() function, numeric vector of length=number of individuals which contains probabilities due to linkage disequilibrium on the second chromosome given a genotype.

Value

The returned value is a numeric matrix (number of individuals x 4) containing probabilities due to linkage disequilibrium for a diplotype.

Author(s)

S. Dejean, N. Oumouhou, D. Estivals, B. Mangin

References

publication to be submitted: C. Cierco-Ayrolles, S. Dejean, A. Legarra, H. Gilbert, T. Druet, F. Ytournel, D. Estivals, N. Oumouhou and B. Mangin. Combining linkage analysis and linkage disequilibrium for QTL fine mapping in animal pedigrees.

See Also

proba.DL


[Package HAPim version 1.3 Index]