distance.test {HAPim}R Documentation

localisation of test positions

Description

The function gives the distance of test positions from the first marker and sorts them out by marker interval. It can be viewed as an internal function. The user does not have to call it by himself.

Usage

distance.test(position, dist.marq)

Arguments

position numeric vector of test positions.
dist.marq results provided by distance.marqueurs() function, numeric vector of length=number of markers which gives the distance of each marker from the bigining of the chromosome.

Value

the returned value is a list of n numeric vectors (n=number of markers-1). The $j$th vector contains the distance (from the first marker) of test positions belonging to the $j$th marker interval.

Author(s)

S. Dejean, N. Oumouhou, D. Estivals, B. Mangin

References

publication to be submitted: C. Cierco-Ayrolles, S. Dejean, A. Legarra, H. Gilbert, T. Druet, F. Ytournel, D. Estivals, N. Oumouhou and B. Mangin. Combining linkage analysis and linkage disequilibrium for QTL fine mapping in animal pedigrees.

See Also

distance.marqueurs


[Package HAPim version 1.3 Index]