proba.DL.diplotype {HAPim} | R Documentation |
The function calculates probabilities due to linkage disequilibrium for a diplotype. It can be viewed as an internal function. The user does not have to call it by himself.
proba.DL.diplotype(DL.chrom1, DL.chrom2)
DL.chrom1 |
results provided by proba.DL() function,
numeric vector of length=number of individuals which contains probabilities due to linkage disequilibrium on the first chromosome given a genotype. |
DL.chrom2 |
results provided by proba.DL() function,
numeric vector of length=number of individuals which contains probabilities due to linkage disequilibrium on the second chromosome given a genotype. |
The returned value is a numeric matrix (number of individuals x 4) containing probabilities due to linkage disequilibrium for a diplotype.
S. Dejean, N. Oumouhou, D. Estivals, B. Mangin
publication to be submitted: C. Cierco-Ayrolles, S. Dejean, A. Legarra, H. Gilbert, T. Druet, F. Ytournel, D. Estivals, N. Oumouhou and B. Mangin. Combining linkage analysis and linkage disequilibrium for QTL fine mapping in animal pedigrees.