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| PLIS-package | PLIS |
| bwfw.hmm | backward and forward inferences |
| bwfw1.hmm | backward and forward inferences |
| em.hmm | EM algorithm for HMM to estimate LIS statistic |
| GWAS.SampleData | Sample GWAS Dataset |
| PLIS | PLIS |
| plis | A multiple testing procedure based on pooled LIS statistics |