Manages microsatellite projects. Creates 96-well maps, genotyping submission forms, rerun management, and import into statistical software.


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Documentation for package ‘genomatic’ version 0.0-7

User Guides and Package Vignettes

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abi_sub Creates ABI submission forms
allele_char Characterizes bins
allele_hist Creates histograms of alleles
allele_process Processes alleles into bins
bin_by_num Graphical output of bin quality
bin_caller Bins peaks
bin_init Initializes allele files
bin_score Automates bin scoring
cat_sorter Sorts categories to their sample
condense Merges samples with multiple non-identical records
dup_checker Checks for duplicate samples
dup_replace Replaces duplicate samples with a single sample
filename2sample Extracts sample names from file names
genobins Remove peaks from files and leave bins
genogui Genomatic graphical user interface
genomatic2genalex Converts data to GenAlEx format
genomatic2ntsys Converts data to NTSYSpc format
genotyper2genomatic Import genotyper tables
init_gmtc Initializes a genomatic data.frame
order_sample Order samples alphanumerically
plater Organizes individual names into 96-well plates
plate_write Write 96-well maps
pop2indiv Population Name to Individual Name Conversion
pop_get Get populations from sample names
sample_sorter Sorts data from separate lists into a data.frame