dup_checker {genomatic}R Documentation

Checks for duplicate samples

Description

Checks a file for duplicates. Returns a sorted file containing duplicates.

Usage

dup_checker(samples)

Arguments

samples A data.frame containing your samples.

Details

Checks a file for duplicates. Returns a sorted file containing duplicates. Duplicates are sorted so they appear next to each other. This file can then be manually sorted to that there is only one instance of each sample. This file is subsequently used by the function ‘dup\_replace’ to remove duplicates and replace them with a single instance.

Value

Retruns a data.frame of samples that appear more than once.

Author(s)

Brian J. Knaus bknaus@fs.fed.us http://brianknaus.com

References

Knaus, B.J. In prep. Genomatic: an R package for DNA fragment analysis project management.


[Package genomatic version 0.0-7 Index]