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Main.HowToDefineVisualQueries History
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!!! How to define visual queries (or ontology patterns)
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June 11, 2006, at 08:13 PM
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RDFScape provides a visual query system, integrated in its browsing mode.
http://www.sgtp.net/AndreaSplendiani/ext/rdfscape/VisualQuery1.jpg
'''1''' While browsing an ontology, select "Make Editable". The contectual menu will present more options:
http://www.sgtp.net/AndreaSplendiani/ext/rdfscape/VisualQuery2.jpg
'''3''' Make variable. Makes this node a variable. The resulting effect is shown below. Note that this menu options is present also for edges.
http://www.sgtp.net/AndreaSplendiani/ext/rdfscape/VisualQuery3.jpg
'''4''' Add filter. This is defined only for literals, and is selectable only when the corresponding node is declared as a variable. Allows the specification of a pattern the resulting literal should match (a substring that should be contained). Only specify the string and not the enclosing //. To get back, use "Restore node" ('''6'''). An example is shown below.
http://www.sgtp.net/AndreaSplendiani/ext/rdfscape/VisualQuery4.jpg
'''5''' Restore node (and "Restore edge" for edges). For a node or edge turned into a variable, restore the original URI.
'''2''' Get pattern. Get the pattern corresponding to the graph in the current Cytoscape window (prompts for a name). Nodes' attributes are not considered. If relevant, these should be visualized as edges and nodes (see [[How to tune visualization options]]). Once a pattern is taken it becomes part of a library of patterns (that can be also saved and loaded in [[How to use analysis contexts | analysis context]]
http://www.sgtp.net/AndreaSplendiani/ext/rdfscape/VisualQuery5.jpg
'''6''' The list of available patterns is available under this panel.
'''7''' Each sub-panel corresponds to a pattern
'''8''' Each pattern has several views. The "graph" view is shown above. Below the "Pattern" view. The "Matches" view depends upon queries and it is illustrated in [[How to use visual queries]]
http://www.sgtp.net/AndreaSplendiani/ext/rdfscape/VisualQuery6.jpg
'''9''' Delete pattern. Eliminate the current pattern from the list (does not affect anaylsis context unless a "save analysis context" is performed).
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