Main.Releases History

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April 21, 2008, at 12:24 PM by 129.20.167.23 -
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Note: you currently need Java 1.6 to run rdfscape!

If the above procedures doesn't work in your case, you can also find individual files here (JVM 1.6)here (JVM 1.5)and here(follow instructions in HowToInstall).

to:

Note: check which version of Java (1.5 or 1.6) you are running!

If the above procedures doesn't work in your case, you can also find individual files here (JVM 1.6) (JVM 1.5) and here(follow instructions in HowToInstall).

April 21, 2008, at 12:10 PM by 129.20.167.23 -
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If the above procedures doesn't work in your case, you can also find individual files here (JVM 1.6) and here(follow instructions in HowToInstall).

to:

If the above procedures doesn't work in your case, you can also find individual files here (JVM 1.6)here (JVM 1.5)and here(follow instructions in HowToInstall).

April 21, 2008, at 12:08 PM by 129.20.167.23 -
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you can download an easy to install tarball here (jvm1.6) here (jvm1.5)or (tested on unix,macosx, a little on windows). Just unpack it within your cytoscape directory and run cytordfscape.sh or cytordfscape.bat (proper permissions may be required).

to:

you can download an easy to install tarball here (jvm1.6) (jvm1.5) (tested on unix,macosx, a little on windows). Just unpack it within your cytoscape directory and run cytordfscape.sh or cytordfscape.bat (proper permissions may be required).

Changed lines 12-13 from:

If the above procedures doesn't work in your case, you can also find individual files here and here(follow instructions in HowToInstall).

to:

If the above procedures doesn't work in your case, you can also find individual files here (JVM 1.6) and here(follow instructions in HowToInstall).

April 21, 2008, at 11:47 AM by 129.20.167.23 -
Changed lines 8-9 from:

you can download an easy to install tarball here (tested on unix,macosx, a little on windows). Just unpack it within your cytoscape directory and run cytordfscape.sh or cytordfscape.bat (proper permissions may be required).

to:

you can download an easy to install tarball here (jvm1.6) here (jvm1.5)or (tested on unix,macosx, a little on windows). Just unpack it within your cytoscape directory and run cytordfscape.sh or cytordfscape.bat (proper permissions may be required).

March 10, 2008, at 03:44 PM by 129.20.167.27 -
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Note: you currently need Java 1.6 to run rdfscape!

February 08, 2008, at 03:46 AM by 129.20.167.23 -
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Release 0.4.0

to:

Release 0.4.1

Changed lines 8-11 from:

you can download an easy to install tarball here (tested on unix). Just unpack it within your cytoscape directory and run cytordfscape.sh or cytordfscape.bat (proper permissions may be required).

If the above procedures doesn't work in your case, you can also find individual files here and here(follow instructions in HowToInstall).

to:

you can download an easy to install tarball here (tested on unix,macosx, a little on windows). Just unpack it within your cytoscape directory and run cytordfscape.sh or cytordfscape.bat (proper permissions may be required).

If the above procedures doesn't work in your case, you can also find individual files here and here(follow instructions in HowToInstall).

February 07, 2008, at 01:46 PM by 129.20.167.23 -
Changed lines 8-9 from:

you can download an easy to install tarball here (tested on unix). Just unpack it within your cytoscape directory and run cytordfscape.sh or cytordfscape.bat (proper permissions may be required).

to:

you can download an easy to install tarball here (tested on unix). Just unpack it within your cytoscape directory and run cytordfscape.sh or cytordfscape.bat (proper permissions may be required).

February 07, 2008, at 01:40 PM by 129.20.167.23 -
Changed lines 10-11 from:

If the above procedures doesn't work in your case, you can also find individual files here and here(follow instructions in HowToInstall).

to:

If the above procedures doesn't work in your case, you can also find individual files here and here(follow instructions in HowToInstall).

February 07, 2008, at 01:33 PM by 129.20.167.23 -
Changed lines 8-9 from:

you can download an easy to install tarball here (tested on unix). Just unpack it within your cytoscape directory and run cytordfscape.sh or cytordfscape.bat (proper permissions may be required).

to:

you can download an easy to install tarball here (tested on unix). Just unpack it within your cytoscape directory and run cytordfscape.sh or cytordfscape.bat (proper permissions may be required).

February 07, 2008, at 01:33 PM by 129.20.167.23 -
Changed lines 8-9 from:

you can download an easy to install tarball here (tested on unix). Just unpack it within your cytoscape directory and run cytordfscape.sh or cytordfscape.bat (proper permissions may be required)

to:

you can download an easy to install tarball here (tested on unix). Just unpack it within your cytoscape directory and run cytordfscape.sh or cytordfscape.bat (proper permissions may be required).

February 07, 2008, at 01:30 PM by 129.20.167.23 -
Changed lines 8-18 from:

you can download an easy to install tarball here. Just unpack it within your cytoscape directory and run cytordfscape.sh or cytordfscape.bat (proper permissions may be required)

If the above procedures doesn't work in your case, you can also find individual files here (follow instructions in howtoinstall).

Source code is available here.

to:

you can download an easy to install tarball here (tested on unix). Just unpack it within your cytoscape directory and run cytordfscape.sh or cytordfscape.bat (proper permissions may be required)

If the above procedures doesn't work in your case, you can also find individual files here and here(follow instructions in HowToInstall).

Source code is available here

February 07, 2008, at 11:42 AM by 129.20.167.23 -
Changed lines 8-10 from:

you can download an easy to install tarball here. (just unpack it within your cytoscape directory and run cytordfscape.sh or cytordfscape.bat)

You can also find individual files here (follow instructions in howtoinstall).

to:

you can download an easy to install tarball here. Just unpack it within your cytoscape directory and run cytordfscape.sh or cytordfscape.bat (proper permissions may be required)

If the above procedures doesn't work in your case, you can also find individual files here (follow instructions in howtoinstall).

February 07, 2008, at 09:02 AM by 129.20.167.23 -
Changed lines 8-9 from:

you can download an easy to install tarball here. (just unpack it within your cytoscape directory and run cytordfscape.sh or cytordfscape.bat)

to:

you can download an easy to install tarball here. (just unpack it within your cytoscape directory and run cytordfscape.sh or cytordfscape.bat)

Changed lines 13-16 from:

All releases 0.2.x are relative to bugfixes/functinality improvements after some limited testing.

Note: no install software is provided. You will need to install requied libraries AND context files AND the vizmap property file.

to:

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to:

Note: no install software is provided. You will need to install requied libraries AND context files AND the vizmap property file.

February 07, 2008, at 09:00 AM by 129.20.167.23 -
Changed lines 8-9 from:

you can download an easy to install tarball here. (just unpack iot within your cytoscape directory and run cytordfscape.sh or cytordfscape.bat).

to:

you can download an easy to install tarball here. (just unpack it within your cytoscape directory and run cytordfscape.sh or cytordfscape.bat) You can also find individual files here (follow instructions in howtoinstall). Source code is available here.

February 07, 2008, at 08:58 AM by 129.20.167.23 -
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to:
  • Simplified interface. The flow of information is now explicitely marked (what can be done and what can't be done depending on the "state" of RDFScape is marked through an icon in each panel). The interactive browser menu has been re-designed ans simplified. Default behaviours have been made more intuitive and other minor improvements have introduced to make RDFScape more user friendly.
  • Help. Help is available for each panel in RDFScape, plus a link to help available on the web is present.
  • Updated. Latest versions of Cytoscape, Jena and Pellet are supported.
  • Bugfixes. Several bugs have been fixed.
  • New package. A new simplified package is provided. Just unzip it in the Cytoscape directory and run Cytoscape/RDFScape through a .bat or .sh file. No additional setup of files or libraries is required.

you can download an easy to install tarball here. (just unpack iot within your cytoscape directory and run cytordfscape.sh or cytordfscape.bat).

February 05, 2008, at 09:57 AM by 129.20.167.23 -
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Note:

to:

Release 0.4.0

February 05, 2008, at 09:56 AM by 129.20.167.23 -
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(:keywords rdfscape, cytoscape, plugin, owl, rdf, semantic web, ontology. system biology :)

July 23, 2007, at 06:33 PM by 86.59.104.195 -
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Note: no install software is provided. You will need to install requied libraries AND context files AND the vizmap property file.

June 07, 2007, at 08:22 PM by 129.20.167.21 -
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You can download a binary here. Include a very basic analysis context and a vizmapper property files.

to:

You can download a tarball here. Include a very basic analysis context and a vizmapper property files.

June 07, 2007, at 08:21 PM by 129.20.167.21 -
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If you are interested in releases <0.2 please send an email (andrea - > pasteur fr). These releases are relative to integration/debugging of functionalities.

to:

All releases 0.2.x are relative to bugfixes/functinality improvements after some limited testing.

Release 0.2.0 (8/7/2007)

You can download a binary here. Include a very basic analysis context and a vizmapper property files. Works with: Cytoscape 2.4.1 Jena 2.5.2 Pellet 1.5-RC1

Some functionalities have not yet been tested under the porting to these new softwares (rules, mapping...)

June 26, 2006, at 12:23 PM by 157.99.164.30 -
Changed lines 2-3 from:

If you are interested in releases <0.2 please send an email (andrea - > pasteur fr). These releases are following integration/debugging of functionalities.

to:

If you are interested in releases <0.2 please send an email (andrea - > pasteur fr). These releases are relative to integration/debugging of functionalities.

June 26, 2006, at 12:22 PM by 157.99.164.30 -
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Note:

If you are interested in releases <0.2 please send an email (andrea - > pasteur fr). These releases are following integration/debugging of functionalities.

June 18, 2006, at 09:42 PM by 157.99.164.30 -
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Release 0.1.1

Check release 0.1 for installation instructions, these did not change.

Inference engine reworked. Pellet + Jena reasoners supported. Rule supported in or on top of reasoners (e.g.:Pellet)

You can download a binary.

May 30, 2006, at 05:50 PM by 157.99.164.30 -
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If you wish to be notified of next releases, leave your email here (This is highly recommended since this is just a development release).

to:

If you wish to be notified of next releases, leave your email here (This is highly recommended since this is just a development release).

May 30, 2006, at 01:25 PM by 157.99.164.30 -
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A default for an Analysis contexts is here (you will need one).

to:

A default for an Analysis contexts is here (you will need one).

May 30, 2006, at 01:24 PM by 157.99.164.30 -
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Source code is Download source here?.

to:

Source code is here.

May 30, 2006, at 01:24 PM by 157.99.164.30 -
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Source code is here.

to:

Source code is Download source here?.

May 30, 2006, at 01:21 PM by 157.99.164.30 -
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A default Analysis context? is here (you will need one).

to:

A default for an Analysis contexts is here (you will need one).

May 30, 2006, at 12:27 PM by 157.99.164.30 -
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includeurl http://www.sgtp.net/AndreaSplendiani/RDFScapeDownloadCounter.php

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May 30, 2006, at 12:26 PM by 157.99.164.30 -
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You can find a binary here.

to:

You can download a binary.

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(:includeurl http://www.sgtp.net/AndreaSplendiani/RDFScapeDownloadCounter.php :)

May 30, 2006, at 12:10 PM by 157.99.164.30 -
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Please read installation notes before proceedings.

to:

Please read installation notes before proceeding.

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A default Analysis context? is here.

to:

A default Analysis context? is here (you will need one).

May 30, 2006, at 12:08 PM by 157.99.164.30 -
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If you wish to be notified of next releases, leave your email here (This is highly recommended since this is just a development release).

May 30, 2006, at 11:23 AM by 157.99.164.30 -
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Please read [installation notes] before proceedings.

You can find a [binary] here.

Source code is [here].

A default [Analysis context] is [here].

to:

Please read installation notes before proceedings.

You can find a binary here.

Source code is here.

A default Analysis context? is here.

May 30, 2006, at 11:22 AM by 157.99.164.30 -
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Release 0.1

This is a development release intended for a technically knowledgeable public intended in experiment semantic web ontologies in the context of Cytoscape. It is not yet intended for the general public.

Please read [installation notes] before proceedings.

You can find a [binary] here.

Source code is [here].

A default [Analysis context] is [here].

Good luck!