S.No | Start | End | Bias | Virulence | Insertion elements | Prediction |
1 | C730_00225 | C730_00390 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
C730_00225 | -2 | 16 | -3.369469 | hypothetical protein | |
C730_00230 | -1 | 16 | -5.323031 | adenine-specific DNA methyltransferase | |
C730_00235 | -2 | 16 | -4.049378 | cytosine specific DNA methyltransferase | |
C730_00240 | -2 | 9 | -2.427813 | hypothetical protein | |
C730_00245 | -2 | 9 | -2.292084 | hypothetical protein | |
C730_00250 | -1 | 9 | -2.330093 | hypothetical protein | |
C730_00255 | 0 | 9 | -1.286847 | adenine/cytosine DNA methyltransferase | |
C730_00260 | 1 | 10 | 0.373618 | sodium/proline symporter | |
C730_00265 | 1 | 12 | -0.056581 | delta-1-pyrroline-5-carboxylate dehydrogenase | |
C730_00270 | 3 | 15 | -1.024828 | hypothetical protein | |
C730_00275 | 3 | 13 | -0.990422 | Myosin-3 | |
C730_00280 | 3 | 12 | -0.616635 | hypothetical protein | |
C730_00285 | 2 | 12 | -0.576790 | hypothetical protein | |
C730_00290 | 1 | 14 | -0.018208 | hypothetical protein | |
C730_00295 | 1 | 10 | 0.465170 | hypothetical protein | |
C730_00300 | 0 | 11 | 0.961832 | hypothetical protein | |
C730_00305 | 0 | 10 | 1.490057 | hypothetical protein | |
C730_00310 | 0 | 11 | 1.578106 | hypothetical protein | |
C730_00315 | -1 | 11 | 2.152520 | ATP-binding protein | |
C730_00320 | 0 | 14 | 2.806425 | urease accessory protein UreH | |
C730_00325 | 4 | 23 | 3.260418 | urease accessory protein UreG | |
C730_00330 | 4 | 24 | 2.825599 | urease accessory protein UreF | |
C730_00335 | 4 | 24 | 2.470118 | urease accessory protein UreE | |
C730_00340 | 3 | 21 | 2.390763 | urease accessory protein UreI | |
C730_00345 | 1 | 20 | 2.010771 | hypothetical protein | |
C730_00350 | 0 | 17 | 2.481742 | urease subunit beta | |
C730_00355 | -3 | 10 | 1.673604 | urease subunit alpha | |
C730_00360 | 0 | 13 | 2.216760 | *lipoprotein signal peptidase | |
C730_00365 | 2 | 13 | 2.667843 | phosphoglucosamine mutase | |
C730_00370 | 3 | 15 | 2.863142 | 30S ribosomal protein S20 | |
C730_00375 | 2 | 13 | 2.058185 | peptide chain release factor 1 | |
C730_00380 | 3 | 13 | 1.925539 | hypothetical protein | |
C730_00385 | 3 | 13 | 1.883748 | hypothetical protein | |
C730_00390 | 2 | 14 | 1.133666 | hypothetical protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
C730_00265 | ANTHRAXTOXNA | 31 | 0.034 | Anthrax toxin LF subunit signature. | |
>ANTHRAXTOXNA#Anthrax toxin LF subunit signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
C730_00280 | GPOSANCHOR | 46 | 1e-07 | Gram-positive coccus surface protein anchor signature. | |
>GPOSANCHOR#Gram-positive coccus surface protein anchor signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
C730_00350 | UREASE | 1045 | 0.0 | Urea amidohydrolase (urease) protein signature. | |
>UREASE#Urea amidohydrolase (urease) protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
C730_00385 | IGASERPTASE | 42 | 8e-06 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. |
2 | C730_00700 | C730_00735 | Y ![]() | N | N | Genomic Island |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
C730_00700 | 2 | 13 | 1.621314 | DNA glycosylase MutY | |
C730_00705 | 3 | 14 | 2.505148 | citrate:succinate antiporter | |
C730_00710 | 4 | 13 | 2.410080 | citrate:succinate antiporter | |
C730_00715 | 4 | 14 | 1.644335 | cbb3-type cytochrome c oxidase subunit I | |
C730_00720 | 0 | 16 | 0.024290 | cbb3-type cytochrome c oxidase subunit II | |
C730_00725 | 2 | 18 | -1.657053 | cytochrome c oxidase subunit Q | |
C730_00730 | 4 | 17 | -1.246707 | cytochrome c oxidase, cbb3-type, subunit III | |
C730_00735 | 4 | 19 | -1.859899 | hypothetical protein |
3 | C730_00910 | C730_01020 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
C730_00910 | 3 | 18 | 1.076705 | serine hydroxymethyltransferase | |
C730_00915 | 3 | 21 | 0.948970 | hypothetical protein | |
C730_00920 | 1 | 18 | 0.067439 | hypothetical protein | |
C730_00925 | 2 | 18 | 1.090250 | hypothetical protein | |
C730_00930 | -1 | 12 | 3.177673 | hypothetical protein | |
C730_00935 | -1 | 10 | 2.863024 | hypothetical protein | |
C730_00940 | -1 | 10 | 2.113975 | hypothetical protein | |
C730_00945 | -2 | 10 | 2.254713 | hypothetical protein | |
C730_00950 | -1 | 10 | 3.051114 | fumarate reductase iron-sulfur subunit | |
C730_00955 | -1 | 10 | 3.095697 | fumarate reductase flavoprotein subunit | |
C730_00960 | -2 | 14 | 1.595226 | fumarate reductase cytochrome b-556 subunit | |
C730_00965 | -2 | 15 | 1.689801 | triosephosphate isomerase | |
C730_00970 | -2 | 16 | 2.846524 | enoyl-(acyl carrier protein) reductase | |
C730_00975 | -2 | 16 | 3.116863 | UDP-3-O-[3-hydroxymyristoyl] glucosamine | |
C730_00980 | -2 | 16 | 3.469397 | S-adenosylmethionine synthetase | |
C730_00985 | -2 | 17 | 2.666942 | mulitfunctional nucleoside diphosphate | |
C730_00990 | 0 | 18 | 1.870392 | hypothetical protein | |
C730_00995 | -2 | 17 | 1.765163 | 50S ribosomal protein L32 | |
C730_01000 | -1 | 11 | -2.374269 | phosphate acyltransferase | |
C730_01005 | 1 | 14 | -4.129265 | 3-oxoacyl-(acyl carrier protein) synthase III | |
C730_01010 | 2 | 14 | -3.923604 | hypothetical protein | |
C730_01015 | 2 | 13 | -3.931381 | hypothetical protein | |
C730_01020 | 2 | 13 | -3.529417 | hypothetical protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
C730_00920 | IGASERPTASE | 32 | 0.003 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
C730_00970 | DHBDHDRGNASE | 60 | 8e-13 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase |
4 | C730_01495 | C730_01550 | Y ![]() | N | N | Genomic Island |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
C730_01495 | 2 | 16 | 3.271341 | 50S ribosomal protein L21 | |
C730_01500 | 2 | 16 | 3.347863 | 50S ribosomal protein L27 | |
C730_01505 | 1 | 15 | 3.566601 | dipeptide ABC transporter periplasmic | |
C730_01510 | 2 | 15 | 3.936992 | dipeptide ABC transporter permease (dppB) | |
C730_01515 | 0 | 15 | 3.293724 | dipeptide ABC transporter permease (dppC) | |
C730_01520 | -2 | 14 | 3.052292 | dipeptide ABC transporter ATP-binding protein | |
C730_01525 | -2 | 14 | 2.807781 | dipeptide ABC transporter ATP-binding protein | |
C730_01530 | -2 | 12 | 2.206452 | GTPase CgtA | |
C730_01535 | -1 | 13 | 1.550831 | hypothetical protein | |
C730_01540 | -1 | 16 | 2.261942 | hypothetical protein | |
C730_01545 | 0 | 17 | 2.746451 | glutamate-1-semialdehyde aminotransferase | |
C730_01550 | 2 | 17 | 2.279190 | hypothetical protein |
5 | C730_01610 | C730_01720 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
C730_01610 | 2 | 16 | -1.137355 | heme iron utilization protein | |
C730_01615 | 1 | 15 | -1.176710 | arginyl-tRNA ligase | |
C730_01620 | 2 | 13 | -0.691151 | sec-independent protein translocase protein | |
C730_01625 | 3 | 11 | -1.293641 | guanylate kinase | |
C730_01630 | 3 | 11 | -2.128224 | poly E-rich protein | |
C730_01635 | 1 | 12 | -2.108776 | nuclease NucT | |
C730_01640 | 1 | 14 | -1.889408 | hypothetical protein | |
C730_01645 | 3 | 14 | -1.416985 | flagellar basal body L-ring protein | |
C730_01650 | 2 | 13 | -1.244682 | CMP-N-acetylneuraminic acid synthetase | |
C730_01655 | 2 | 13 | -0.733797 | flagellar protein FlaG | |
C730_01660 | 1 | 12 | 0.819346 | tetraacyldisaccharide 4'-kinase | |
C730_01665 | 0 | 15 | 1.881556 | NAD synthetase | |
C730_01670 | -1 | 17 | 2.424160 | *ketol-acid reductoisomerase | |
C730_01675 | 0 | 18 | 1.500837 | cell division inhibitor | |
C730_01680 | 1 | 17 | 0.528023 | cell division topological specificity factor | |
C730_01685 | 0 | 19 | 0.633483 | DNA processing chain A (dprA) | |
C730_01690 | 1 | 20 | -0.382045 | Holliday junction resolvase-like protein | |
C730_01695 | 3 | 22 | -1.442436 | hypothetical protein | |
C730_01710 | 2 | 20 | -1.499232 | hypothetical protein | |
C730_01715 | 2 | 27 | -1.321334 | hypothetical protein | |
C730_01720 | 2 | 28 | -0.374981 | hypothetical protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
C730_01625 | PF05272 | 29 | 0.011 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
C730_01630 | IGASERPTASE | 60 | 2e-11 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
C730_01645 | FLGLRINGFLGH | 195 | 9e-65 | Flagellar L-ring protein signature. | |
>FLGLRINGFLGH#Flagellar L-ring protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
C730_01655 | SACTRNSFRASE | 27 | 0.029 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. |
6 | C730_02165 | C730_02365 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
C730_02165 | 0 | 15 | -3.375788 | hypothetical protein | |
C730_02170 | 2 | 17 | -3.913373 | hypothetical protein | |
C730_02175 | 2 | 27 | -5.521318 | phage/colicin/tellurite resistance cluster terY | |
C730_02180 | 4 | 27 | -6.246707 | hypothetical protein | |
C730_02185 | 4 | 21 | -4.985036 | hypothetical protein | |
C730_02190 | 5 | 20 | -5.334033 | protein phosphatase 2C | |
C730_02195 | 6 | 19 | -5.792751 | protein kinase C-like protein | |
C730_02200 | 7 | 20 | -6.532384 | hypothetical protein | |
C730_02220 | 7 | 20 | -6.392615 | IS605 transposase (tnpA) | |
C730_02225 | 7 | 22 | -6.408584 | IS605 transposase (tnpB) | |
C730_02230 | 7 | 23 | -7.082980 | hypothetical protein | |
C730_02235 | 7 | 23 | -7.152345 | DNA topoisomerase I (topA) | |
C730_02240 | 6 | 25 | -7.730970 | VirB4-like protein | |
C730_02245 | 5 | 24 | -6.061264 | hypothetical protein | |
C730_02250 | 2 | 19 | -5.909296 | hypothetical protein | |
C730_02255 | 3 | 19 | -5.778730 | hypothetical protein | |
C730_02260 | 2 | 20 | -5.777906 | hypothetical protein | |
C730_02265 | 4 | 21 | -5.978779 | hypothetical protein | |
C730_02270 | 3 | 20 | -5.562946 | hypothetical protein | |
C730_02300 | 2 | 20 | -6.468124 | hypothetical protein | |
C730_02305 | 10 | 27 | -7.882985 | hypothetical protein | |
C730_02320 | 8 | 26 | -7.902254 | hypothetical protein | |
C730_02325 | 8 | 25 | -7.560834 | hypothetical protein | |
C730_02330 | 7 | 24 | -7.599073 | hypothetical protein | |
C730_02335 | 7 | 23 | -7.797706 | hypothetical protein | |
C730_02340 | 4 | 23 | -7.475685 | hypothetical protein | |
C730_02345 | 4 | 21 | -7.224484 | protein VirB4 | |
C730_02350 | 0 | 19 | -5.213344 | VirB7 type IV secretion protein | |
C730_02355 | -2 | 18 | -4.126345 | hypothetical protein | |
C730_02360 | -1 | 17 | -3.651131 | hypothetical protein | |
C730_02365 | -1 | 16 | -3.503271 | type I restriction enzyme S protein (hsdS) |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
C730_02230 | PF04335 | 93 | 3e-24 | VirB8 type IV secretion protein | |
>PF04335#VirB8 type IV secretion protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
C730_02270 | adhesinb | 29 | 0.032 | Adhesin B signature. | |
>adhesinb#Adhesin B signature. |
7 | C730_02425 | C730_02510 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
C730_02425 | 0 | 14 | -3.458427 | molybdenum ABC transporter periplasmic | |
C730_02430 | 0 | 12 | -3.659966 | molybdenum ABC transporter ModB | |
C730_02435 | -1 | 9 | -2.078391 | molybdenum ABC transporter ATP-binding protein | |
C730_02440 | -1 | 10 | -2.108683 | glutamyl-tRNA ligase | |
C730_02445 | -1 | 11 | -2.684366 | hypothetical protein | |
C730_02450 | -2 | 11 | -2.771193 | adenine-specific DNA methyltransferase | |
C730_02455 | 0 | 13 | -1.274068 | hypothetical protein | |
C730_02460 | 0 | 17 | -0.308980 | GTP-binding protein TypA | |
C730_02465 | 2 | 24 | -4.308722 | adenine-specific DNA methyltransferase | |
C730_02470 | 0 | 18 | -3.163006 | type II adenine specific DNA methyltransferase | |
C730_02475 | 4 | 16 | -0.095787 | hypothetical protein | |
C730_02480 | 6 | 18 | 0.466256 | Type II DNA modification enzyme | |
C730_02485 | 1 | 16 | -0.363649 | type II DNA modification | |
C730_02490 | 2 | 17 | -0.243154 | hypothetical protein | |
C730_02495 | 2 | 16 | 0.481122 | catalase-like protein | |
C730_02500 | 3 | 17 | 0.516578 | hypothetical protein | |
C730_02505 | 3 | 14 | -1.166821 | hypothetical protein | |
C730_02510 | 3 | 14 | -1.251716 | hypothetical protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
C730_02435 | PF05272 | 30 | 0.007 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
C730_02460 | TCRTETOQM | 196 | 3e-57 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family |
8 | C730_02660 | C730_02810 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
C730_02660 | 0 | 19 | -3.192605 | GTPase Era | |
C730_02665 | 3 | 17 | -2.953595 | hypothetical protein | |
C730_02670 | 6 | 19 | -3.127966 | hypothetical protein | |
C730_02675 | 7 | 20 | -2.316754 | cag pathogenicity island protein (cag1) | |
C730_02680 | 8 | 20 | -2.107038 | cag pathogenicity island protein Epsilon | |
C730_02685 | 8 | 19 | -2.221677 | cag island protein | |
C730_02690 | 8 | 19 | -2.088424 | cag pathogenicity island protein (cag3) | |
C730_02695 | 9 | 16 | -2.393086 | cag pathogenicity island protein (cag4) | |
C730_02700 | 9 | 17 | -2.752296 | cag pathogenicity island protein Beta | |
C730_02705 | 9 | 20 | -3.131616 | cag pathogenicity island protein alpha | |
C730_02710 | 8 | 20 | -3.376760 | cag pathogenicity island protein (cag6) | |
C730_02715 | 8 | 21 | -3.382790 | hypothetical protein | |
C730_02720 | 9 | 20 | -3.341466 | cag pathogenicity island protein (cag7) | |
C730_02725 | 9 | 26 | -4.247817 | cag pathogenicity island protein (cag8) | |
C730_02730 | 10 | 30 | -4.371000 | cag pathogenicity island protein (cag9) | |
C730_02735 | 14 | 31 | -5.096179 | cag pathogenicity island protein (cag10) | |
C730_02740 | 14 | 35 | -5.266315 | cag pathogenicity island protein (cag11) | |
C730_02745 | 12 | 28 | -5.254643 | cag pathogenicity island protein T | |
C730_02750 | 10 | 24 | -5.513434 | cag pathogenicity island protein T | |
C730_02755 | 10 | 23 | -5.415322 | cag pathogenicity island protein S | |
C730_02760 | 6 | 20 | -4.044164 | cag pathogenicity island protein R | |
C730_02765 | 6 | 19 | -2.846130 | hypothetical protein | |
C730_02770 | 5 | 19 | -2.818030 | cag pathogenicity island protein (cag16) | |
C730_02775 | 6 | 20 | -3.127798 | cag pathogenicity island protein (cag17) | |
C730_02780 | 5 | 19 | -2.937113 | cag pathogenicity island protein (cag18) | |
C730_02785 | 5 | 20 | -3.163692 | cag pathogenicity island protein (cag19) | |
C730_02790 | 5 | 20 | -3.201912 | cag pathogenicity island protein (cag20) | |
C730_02795 | 6 | 22 | -4.130894 | cag pathogenicity island protein (cag21) | |
C730_02800 | 6 | 22 | -3.418068 | cag pathogenicity island protein (cag22) | |
C730_02805 | 4 | 20 | -2.485358 | cag pathogenicity island protein (cag23) | |
C730_02810 | 2 | 18 | -1.017376 | cag pathogenicity island protein (cag24) |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
C730_02660 | PF03944 | 31 | 0.005 | delta endotoxin | |
>PF03944#delta endotoxin | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
C730_02690 | PF07201 | 30 | 0.019 | Hypersensitivity response secretion protein HrpJ | |
>PF07201#Hypersensitivity response secretion protein HrpJ | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
C730_02720 | IGASERPTASE | 35 | 0.003 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
C730_02725 | TYPE4SSCAGX | 875 | 0.0 | Type IV secretion system CagX conjugation protein si... | |
>TYPE4SSCAGX#Type IV secretion system CagX conjugation protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
C730_02735 | PF04335 | 118 | 8e-35 | VirB8 type IV secretion protein | |
>PF04335#VirB8 type IV secretion protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
C730_02775 | TYPE4SSCAGX | 28 | 0.042 | Type IV secretion system CagX conjugation protein si... | |
>TYPE4SSCAGX#Type IV secretion system CagX conjugation protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
C730_02805 | ACRIFLAVINRP | 32 | 0.012 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. |
9 | C730_03470 | C730_03600 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
C730_03470 | 0 | 15 | -3.670287 | hypothetical protein | |
C730_03475 | 0 | 14 | -2.207266 | hypothetical protein | |
C730_03480 | 0 | 14 | -2.603549 | aspartate aminotransferase | |
C730_03485 | 0 | 11 | -2.255634 | hypothetical protein | |
C730_03490 | -1 | 12 | 0.154845 | integrase-recombinase protein | |
C730_03495 | 2 | 11 | 0.637753 | methylated-DNA--protein-cysteine | |
C730_03500 | 1 | 11 | 1.221505 | hypothetical protein | |
C730_03505 | 1 | 12 | 1.535886 | putative lipopolysaccharide biosynthesis | |
C730_03510 | 1 | 12 | 1.842128 | ribonucleotide-diphosphate reductase subunit | |
C730_03515 | 2 | 16 | 1.592421 | hypothetical protein | |
C730_03520 | 5 | 13 | 0.855386 | hypothetical protein | |
C730_03525 | 2 | 10 | 0.473596 | bifunctional N-acetylglucosamine-1-phosphate | |
C730_03530 | 1 | 12 | -0.332177 | hypothetical protein | |
C730_03535 | 1 | 10 | 0.921907 | flagellar biosynthesis protein | |
C730_03540 | 1 | 11 | 1.054360 | flagellar biosynthesis protein FliP | |
C730_03545 | 1 | 11 | 1.612803 | iron(III) dicitrate transport protein (fecA) | |
C730_03550 | -2 | 11 | 2.154747 | ferrous iron transport protein B | |
C730_03555 | -1 | 14 | 3.054666 | hypothetical protein | |
C730_03560 | 1 | 14 | 4.333003 | acetyl coenzyme A acetyltransferase | |
C730_03565 | 2 | 16 | 3.555188 | succinyl-CoA-transferase subunit A | |
C730_03570 | 3 | 15 | 3.995718 | succinyl-CoA-transferase subunit B | |
C730_03575 | 4 | 15 | 3.618972 | short-chain fatty acids transporter | |
C730_03585 | 4 | 16 | 3.018885 | hypothetical protein | |
C730_03595 | 4 | 15 | 2.908891 | hydantoin utilization protein A (hyuA) | |
C730_03600 | 2 | 13 | 1.974115 | Hydantoin utilization protein B |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
C730_03535 | FLGBIOSNFLIP | 75 | 4e-20 | Escherichia coli: Flagellar biosynthetic protein Fl... | |
>FLGBIOSNFLIP#Escherichia coli: Flagellar biosynthetic protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
C730_03540 | FLGBIOSNFLIP | 174 | 4e-58 | Escherichia coli: Flagellar biosynthetic protein Fl... | |
>FLGBIOSNFLIP#Escherichia coli: Flagellar biosynthetic protein FliP |
10 | C730_03685 | C730_03765 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
C730_03685 | 3 | 12 | -0.674508 | RNA polymerase factor sigma-54 | |
C730_03690 | 2 | 14 | 0.328217 | putative ABC transporter ATP-binding protein | |
C730_03695 | 2 | 12 | 0.119414 | hypothetical protein | |
C730_03700 | 1 | 13 | 0.940551 | DNA polymerase III subunits gamma and tau | |
C730_03705 | 1 | 14 | 2.767826 | hypothetical protein | |
C730_03710 | 2 | 14 | 3.884589 | hypothetical protein | |
C730_03715 | 3 | 16 | 3.660001 | hypothetical protein | |
C730_03720 | 3 | 16 | 3.541547 | hypothetical protein | |
C730_03725 | 2 | 15 | 3.234443 | hypothetical protein | |
C730_03730 | 1 | 13 | 2.491428 | L-asparaginase II | |
C730_03735 | 0 | 12 | 0.950420 | anaerobic C4-dicarboxylate transporter | |
C730_03740 | 0 | 13 | -0.210975 | hypothetical protein | |
C730_03745 | 1 | 13 | -1.643849 | hypothetical protein | |
C730_03750 | 2 | 15 | -3.204773 | transcriptional regulator | |
C730_03755 | 2 | 13 | -2.826511 | tRNA(Ile)-lysidine synthetase | |
C730_03760 | 2 | 13 | -2.606607 | hypothetical protein | |
C730_03765 | 2 | 11 | -1.432702 | hypothetical protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
C730_03700 | IGASERPTASE | 34 | 0.002 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
C730_03715 | SECA | 24 | 0.038 | SecA protein signature. | |
>SECA#SecA protein signature. |
11 | C730_04475 | C730_04700 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
C730_04475 | 2 | 14 | 2.561583 | alkylphosphonate uptake protein | |
C730_04480 | 2 | 15 | 2.681231 | hypothetical protein | |
C730_04485 | 3 | 14 | 2.738065 | hypothetical protein | |
C730_04490 | 3 | 14 | 2.329434 | catalase | |
C730_04495 | 2 | 15 | 1.906949 | iron-regulated outer membrane protein | |
C730_04500 | 3 | 21 | -2.052446 | Holliday junction resolvase | |
C730_04505 | 6 | 25 | -3.724553 | hypothetical protein | |
C730_04510 | 3 | 18 | -1.802262 | hypothetical protein | |
C730_04515 | 0 | 15 | -2.525631 | hypothetical protein | |
C730_04520 | 3 | 13 | -1.832165 | hypothetical protein | |
C730_04525 | 3 | 12 | -1.262958 | hypothetical protein | |
C730_04530 | 3 | 12 | -1.094748 | hypothetical protein | |
C730_04535 | 2 | 12 | 0.120174 | Holliday junction DNA helicase RuvA | |
C730_04540 | 2 | 12 | 0.258360 | hypothetical protein | |
C730_04545 | 1 | 14 | 1.342728 | virulence factor MviN protein | |
C730_04550 | 0 | 15 | 1.971900 | cysteinyl-tRNA ligase | |
C730_04565 | 1 | 17 | 2.249493 | iron compounds ABC transporter ATP-binding | |
C730_04570 | 0 | 19 | 2.235857 | iron(III) dicitrate ABC transporter permease | |
C730_04575 | 0 | 13 | -1.014149 | short-chain oxidoreductase | |
C730_04580 | 2 | 15 | 0.855419 | hypothetical protein | |
C730_04585 | 2 | 17 | 0.842534 | hypothetical protein | |
C730_04590 | 0 | 16 | 2.159874 | hypothetical protein | |
C730_04595 | 1 | 16 | 2.719755 | hypothetical protein | |
C730_04600 | 0 | 15 | 2.814181 | hypothetical protein | |
C730_04605 | 1 | 16 | 3.289544 | hypothetical protein | |
C730_04610 | 0 | 15 | 2.393930 | **hypothetical protein | |
C730_04615 | 0 | 15 | 1.798064 | hydrogenase isoenzymes formation protein HypD | |
C730_04620 | 0 | 17 | 0.458055 | hydrogenase expression/formation protein | |
C730_04625 | -1 | 17 | 0.718467 | hydrogenase expression/formation protein HypB | |
C730_04630 | -3 | 18 | 0.873794 | hypothetical protein | |
C730_04635 | 2 | 17 | 1.825042 | hypothetical protein | |
C730_04640 | 1 | 15 | 2.064982 | acetate kinase | |
C730_04645 | 1 | 15 | 2.534744 | acetate kinase A/propionate kinase 2 | |
C730_04650 | 1 | 15 | 1.707839 | phosphotransacetylase | |
C730_04665 | 2 | 14 | 0.862228 | phosphotransacetylase (pta) | |
C730_04670 | 0 | 14 | 0.733773 | hypothetical protein | |
C730_04675 | -2 | 13 | 1.459920 | flagellar basal body rod modification protein | |
C730_04680 | -1 | 14 | 1.875005 | flagellar hook protein FlgE | |
C730_04685 | -1 | 12 | 1.475575 | hypothetical protein | |
C730_04690 | -1 | 12 | 2.212255 | adenine-specific DNA methyltransferase | |
C730_04695 | 0 | 12 | 2.791545 | rep helicase, single-stranded DNA-dependent | |
C730_04700 | 2 | 14 | 3.525326 | hypothetical protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
C730_04550 | OMS28PORIN | 30 | 0.015 | OMS28 porin signature. | |
>OMS28PORIN#OMS28 porin signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
C730_04575 | DHBDHDRGNASE | 93 | 2e-24 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
C730_04640 | ACETATEKNASE | 123 | 5e-37 | Acetate kinase family signature. | |
>ACETATEKNASE#Acetate kinase family signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
C730_04645 | ACETATEKNASE | 353 | e-123 | Acetate kinase family signature. | |
>ACETATEKNASE#Acetate kinase family signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
C730_04670 | IGASERPTASE | 36 | 5e-04 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
C730_04680 | FLGHOOKAP1 | 35 | 7e-04 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. |
12 | C730_05035 | C730_05195 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
C730_05035 | 3 | 15 | 1.193770 | cell division protein FtsA | |
C730_05040 | 4 | 18 | 0.303362 | cell division protein FtsZ | |
C730_05045 | 3 | 18 | -2.026807 | hypothetical protein | |
C730_05050 | 4 | 18 | -2.485202 | hypothetical protein | |
C730_05055 | 4 | 21 | -2.971416 | hypothetical protein | |
C730_05060 | 3 | 19 | -3.216404 | hypothetical protein | |
C730_05065 | 1 | 20 | -4.333441 | hypothetical protein | |
C730_05070 | 1 | 22 | -5.122100 | hypothetical protein | |
C730_05075 | 4 | 28 | -7.012990 | hypothetical protein | |
C730_05080 | 4 | 22 | -5.081206 | hypothetical protein | |
C730_05085 | 3 | 22 | -5.317555 | hypothetical protein | |
C730_05090 | 4 | 22 | -5.233193 | hypothetical protein | |
C730_05095 | 6 | 24 | -5.891515 | hypothetical protein | |
C730_05100 | 7 | 23 | -6.402470 | IS605 transposase (tnpA) | |
C730_05105 | 10 | 24 | -6.382484 | IS605 transposase (tnpB) | |
C730_05110 | 10 | 24 | -6.365512 | hypothetical protein | |
C730_05125 | 10 | 23 | -6.317328 | hypothetical protein | |
C730_05130 | 10 | 22 | -6.087386 | hypothetical protein | |
C730_05135 | 10 | 20 | -5.065318 | integrase/recombinase (xerD) | |
C730_05140 | 9 | 18 | -4.424287 | relaxase | |
C730_05145 | 4 | 17 | -3.622228 | IS605 transposase (tnpB) | |
C730_05150 | 3 | 15 | -4.284030 | IS605 transposase (tnpA) | |
C730_05155 | 4 | 16 | -4.222122 | adenine specific DNA methyltransferase | |
C730_05160 | 3 | 15 | -4.418434 | PARA protein | |
C730_05165 | 4 | 17 | -4.510965 | hypothetical protein | |
C730_05170 | 2 | 19 | -5.976680 | hypothetical protein | |
C730_05185 | 3 | 24 | -7.004282 | hypothetical protein | |
C730_05190 | 3 | 22 | -6.932981 | hypothetical protein | |
C730_05195 | 0 | 12 | -3.659417 | conjugal transfer protein (traG) |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
C730_05035 | SHAPEPROTEIN | 42 | 3e-06 | Bacterial cell shape determinant MreB/Mbl protein s... | |
>SHAPEPROTEIN#Bacterial cell shape determinant MreB/Mbl protein |
13 | C730_05690 | C730_05810 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
C730_05690 | 2 | 9 | 1.738343 | glucokinase | |
C730_05695 | 3 | 10 | 0.909709 | cinnamyl-alcohol dehydrogenase ELI3-2 (cad) | |
C730_05700 | 1 | 11 | 1.815736 | LPS biosynthesis protein | |
C730_05705 | 2 | 12 | 2.567585 | hypothetical protein | |
C730_05710 | 0 | 14 | 2.991892 | hypothetical protein | |
C730_05715 | 0 | 12 | 2.579051 | pyruvate flavodoxin oxidoreductase subunit | |
C730_05720 | -1 | 11 | 2.325575 | pyruvate flavodoxin oxidoreductase subunit | |
C730_05725 | -1 | 11 | 1.793351 | pyruvate flavodoxin oxidoreductase subunit | |
C730_05730 | 0 | 11 | -0.066151 | ferrodoxin oxidoreductase beta subunit | |
C730_05735 | 2 | 12 | -0.600593 | adenylosuccinate lyase | |
C730_05740 | 3 | 15 | -1.131264 | hypothetical protein | |
C730_05745 | 1 | 15 | -0.014447 | excinuclease ABC subunit B | |
C730_05750 | 2 | 15 | -0.319942 | hypothetical protein | |
C730_05755 | 2 | 14 | -0.333776 | hypothetical protein | |
C730_05760 | -1 | 15 | 0.038016 | hypothetical protein | |
C730_05765 | -1 | 14 | 0.223542 | hypothetical protein | |
C730_05770 | 0 | 14 | -0.069682 | gamma-glutamyltranspeptidase | |
C730_05775 | -1 | 13 | -1.131433 | flagellar hook-associated protein FlgK | |
C730_05780 | 0 | 16 | -1.784293 | hypothetical protein | |
C730_05785 | 1 | 19 | -1.223478 | cytosine specific DNA methyltransferase | |
C730_05790 | 2 | 16 | -0.846334 | hypothetical protein | |
C730_05795 | 2 | 14 | -1.840314 | hypothetical protein | |
C730_05800 | 3 | 15 | -1.743974 | peptidyl-prolyl cis-trans isomerase | |
C730_05805 | 3 | 17 | -2.453378 | hypothetical protein | |
C730_05810 | 3 | 15 | -2.108428 | peptidoglycan-associated lipoprotein precursor |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
C730_05715 | YERSSTKINASE | 29 | 0.010 | Yersinia serine/threonine protein kinase signature. | |
>YERSSTKINASE#Yersinia serine/threonine protein kinase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
C730_05775 | FLGHOOKAP1 | 570 | 0.0 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
C730_05805 | GPOSANCHOR | 33 | 0.002 | Gram-positive coccus surface protein anchor signature. | |
>GPOSANCHOR#Gram-positive coccus surface protein anchor signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
C730_05810 | OMPADOMAIN | 147 | 6e-46 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. |
14 | C730_05865 | C730_05890 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
C730_05865 | 0 | 18 | -3.681306 | F0F1 ATP synthase subunit B' | |
C730_05870 | 1 | 18 | -3.287343 | plasmid replication-partition related protein | |
C730_05875 | 2 | 18 | -3.740321 | SpoOJ regulator | |
C730_05880 | 2 | 20 | -4.954582 | biotin--protein ligase | |
C730_05885 | 2 | 21 | -5.557448 | methionyl-tRNA formyltransferase | |
C730_05890 | 2 | 22 | -5.839680 | hypothetical protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
C730_05875 | PF07675 | 31 | 0.004 | Cleaved Adhesin | |
>PF07675#Cleaved Adhesin | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
C730_05885 | FERRIBNDNGPP | 30 | 0.008 | Ferrichrome-binding periplasmic protein signature. | |
>FERRIBNDNGPP#Ferrichrome-binding periplasmic protein signature. |
15 | C730_07165 | C730_07220 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
C730_07165 | 2 | 17 | -2.832073 | ribulose-phosphate 3-epimerase | |
C730_07170 | 2 | 19 | -3.671284 | DNA polymerase III subunit epsilon | |
C730_07175 | 4 | 17 | -6.344078 | hypothetical protein | |
C730_07180 | 6 | 13 | -3.979591 | hypothetical protein | |
C730_07185 | 4 | 11 | -2.193209 | hypothetical protein | |
C730_07190 | 5 | 12 | -2.352826 | hypothetical protein | |
C730_07195 | 1 | 11 | -1.717943 | hypothetical protein | |
C730_07200 | 0 | 13 | -1.988666 | fibronectin/fibrinogen-binding protein | |
C730_07205 | -2 | 11 | -1.086064 | DNA repair protein (recN) | |
C730_07210 | 1 | 13 | -0.002204 | inorganic polyphosphate/ATP-NAD kinase | |
C730_07215 | 0 | 11 | -0.283601 | hypothetical protein | |
C730_07220 | 2 | 12 | 2.505066 | hypothetical protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
C730_07200 | FbpA_PF05833 | 112 | 5e-29 | Fibronectin-binding protein | |
>FbpA_PF05833#Fibronectin-binding protein |
16 | C730_07595 | C730_07655 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
C730_07595 | 2 | 10 | 0.764511 | hypothetical protein | |
C730_07600 | 1 | 8 | 0.365159 | hypothetical protein | |
C730_07605 | 1 | 9 | 0.400622 | branched-chain amino acid aminotransferase | |
C730_07610 | 1 | 11 | -0.318509 | hypothetical protein | |
C730_07615 | 1 | 12 | -0.501406 | DNA polymerase I | |
C730_07620 | -1 | 15 | 0.148001 | type IIS restriction enzyme R protein (BCGIB) | |
C730_07625 | 0 | 15 | 0.489164 | type IIS restriction enzyme M protein (mod) | |
C730_07630 | 4 | 17 | 0.663862 | hypothetical protein | |
C730_07635 | 3 | 13 | 0.424483 | thymidylate kinase | |
C730_07640 | 3 | 12 | 0.162947 | phosphopantetheine adenylyltransferase | |
C730_07645 | 2 | 12 | 0.405984 | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase | |
C730_07650 | 3 | 12 | 0.154701 | hypothetical protein | |
C730_07655 | 2 | 12 | 0.154884 | flagellar basal body P-ring biosynthesis protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
C730_07635 | BLACTAMASEA | 27 | 0.030 | Beta-lactamase class A signature. | |
>BLACTAMASEA#Beta-lactamase class A signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
C730_07640 | LPSBIOSNTHSS | 224 | 1e-78 | Lipopolysaccharide core biosynthesis protein signat... | |
>LPSBIOSNTHSS#Lipopolysaccharide core biosynthesis protein |
17 | C730_07810 | C730_07960 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
C730_07810 | 2 | 13 | 2.937122 | saccharopine dehydrogenase | |
C730_07815 | 2 | 14 | 2.960689 | ferrodoxin-like protein | |
C730_07820 | 1 | 12 | 2.043745 | glycerol-3-phosphate acyltransferase PlsY | |
C730_07825 | -1 | 12 | 1.844076 | hypothetical protein | |
C730_07830 | -1 | 11 | 0.701934 | hypothetical protein | |
C730_07835 | -1 | 11 | -0.830172 | iron-regulated outer membrane protein | |
C730_07840 | 0 | 15 | -3.594075 | hypothetical protein | |
C730_07845 | 0 | 11 | -3.535286 | selenocysteine synthase | |
C730_07850 | 0 | 10 | -3.411876 | transcription elongation factor NusA | |
C730_07855 | 1 | 10 | -4.606845 | hypothetical protein | |
C730_07860 | 1 | 10 | -3.637209 | type IIS restriction enzyme R and M protein | |
C730_07865 | 1 | 13 | -3.948325 | hypothetical protein | |
C730_07880 | 2 | 12 | -3.467847 | type III restriction enzyme R protein (res) | |
C730_07885 | 2 | 13 | -3.273734 | type III R-M system modification enzyme | |
C730_07890 | 1 | 12 | -2.935241 | type III DNA modification enzyme | |
C730_07895 | 0 | 13 | -1.780157 | ATP-dependent DNA helicase RecG | |
C730_07900 | 0 | 16 | -1.105207 | hypothetical protein | |
C730_07905 | -1 | 14 | -0.856989 | hypothetical protein | |
C730_07910 | -1 | 12 | -1.120239 | exodeoxyribonuclease III | |
C730_07915 | 1 | 12 | -0.176127 | *hypothetical protein | |
C730_07920 | 3 | 16 | -0.039662 | hypothetical protein | |
C730_07925 | 2 | 14 | 0.301667 | chromosomal replication initiation protein | |
C730_07930 | 1 | 16 | -0.669618 | purine nucleoside phosphorylase (punB) | |
C730_07935 | 1 | 15 | -1.081144 | hypothetical protein | |
C730_07940 | 1 | 15 | -1.111632 | glucosamine--fructose-6-phosphate | |
C730_07945 | 2 | 16 | -3.429388 | FAD-dependent thymidylate synthase | |
C730_07950 | 1 | 15 | -2.194528 | hypothetical protein | |
C730_07955 | 0 | 13 | -0.847646 | IS605 transposase (tnpB) | |
C730_07960 | 2 | 11 | 0.716939 | IS605 transposase (tnpA) |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
C730_07825 | PF08280 | 26 | 0.032 | M protein trans-acting positive regulator | |
>PF08280#M protein trans-acting positive regulator | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
C730_07925 | HTHFIS | 35 | 5e-04 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. |
18 | C730_00180 | C730_00205 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
C730_00180 | -2 | 13 | 0.404200 | hypothetical protein | |
C730_00185 | -2 | 13 | 0.357231 | conjugal plasmid transfer system protein | |
C730_00190 | -2 | 14 | 1.149127 | ComB10 competence protein | |
C730_00195 | -1 | 12 | 1.344916 | mannose-6-phosphate isomerase | |
C730_00200 | -2 | 12 | 1.621943 | GDP-D-mannose dehydratase | |
C730_00205 | -1 | 13 | 1.491686 | nodulation protein (nolK) |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
C730_00180 | PF04335 | 132 | 2e-40 | VirB8 type IV secretion protein | |
>PF04335#VirB8 type IV secretion protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
C730_00185 | TYPE4SSCAGX | 30 | 0.017 | Type IV secretion system CagX conjugation protein si... | |
>TYPE4SSCAGX#Type IV secretion system CagX conjugation protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
C730_00195 | FLGMRINGFLIF | 31 | 0.015 | Flagellar M-ring protein signature. | |
>FLGMRINGFLIF#Flagellar M-ring protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
C730_00200 | NUCEPIMERASE | 88 | 2e-21 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
C730_00205 | NUCEPIMERASE | 53 | 4e-10 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. |
19 | C730_00565 | C730_00595 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
C730_00565 | 0 | 17 | -1.396931 | flagellin B | |
C730_00570 | 0 | 13 | -1.689582 | DNA topoisomerase I | |
C730_00575 | 1 | 17 | -2.205885 | hypothetical protein | |
C730_00580 | 1 | 15 | -1.481302 | hypothetical protein | |
C730_00585 | 0 | 12 | -0.724102 | hypothetical protein | |
C730_00590 | -1 | 10 | 0.648228 | hypothetical protein | |
C730_00595 | 0 | 13 | 1.879419 | phosphoenolpyruvate synthase |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
C730_00565 | FLAGELLIN | 284 | 3e-92 | Flagellin signature. | |
>FLAGELLIN#Flagellin signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
C730_00585 | IGASERPTASE | 55 | 3e-10 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
C730_00590 | IGASERPTASE | 29 | 0.045 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
C730_00595 | PHPHTRNFRASE | 294 | 4e-92 | Phosphoenolpyruvate-protein phosphotransferase sign... | |
>PHPHTRNFRASE#Phosphoenolpyruvate-protein phosphotransferase |
20 | C730_01625 | C730_01655 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
C730_01625 | 3 | 11 | -1.293641 | guanylate kinase | |
C730_01630 | 3 | 11 | -2.128224 | poly E-rich protein | |
C730_01635 | 1 | 12 | -2.108776 | nuclease NucT | |
C730_01640 | 1 | 14 | -1.889408 | hypothetical protein | |
C730_01645 | 3 | 14 | -1.416985 | flagellar basal body L-ring protein | |
C730_01650 | 2 | 13 | -1.244682 | CMP-N-acetylneuraminic acid synthetase | |
C730_01655 | 2 | 13 | -0.733797 | flagellar protein FlaG |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
C730_01625 | PF05272 | 29 | 0.011 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
C730_01630 | IGASERPTASE | 60 | 2e-11 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
C730_01645 | FLGLRINGFLGH | 195 | 9e-65 | Flagellar L-ring protein signature. | |
>FLGLRINGFLGH#Flagellar L-ring protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
C730_01655 | SACTRNSFRASE | 27 | 0.029 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. |
21 | C730_01780 | C730_01835 | N ![]() | Y ![]() | Y | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
C730_01780 | -3 | 10 | 0.841997 | flagellar MS-ring protein | |
C730_01785 | -3 | 10 | 1.436763 | flagellar motor switch protein G | |
C730_01790 | -2 | 9 | 0.556561 | flagellar assembly protein H | |
C730_01795 | -2 | 9 | 0.911869 | 1-deoxy-D-xylulose-5-phosphate synthase | |
C730_01800 | -2 | 11 | 0.280629 | GTP-binding protein LepA | |
C730_01805 | -2 | 12 | -0.844997 | hypothetical protein | |
C730_01810 | -1 | 12 | 0.063379 | short chain alcohol dehydrogenase | |
C730_01815 | -1 | 11 | -0.357484 | hypothetical protein | |
C730_01825 | 1 | 11 | 0.180075 | **UDP-glucose 4-epimerase | |
C730_01830 | 1 | 12 | -0.200195 | tRNA pseudouridine synthase A | |
C730_01835 | 0 | 12 | -1.357277 | hypothetical protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
C730_01780 | FLGMRINGFLIF | 559 | 0.0 | Flagellar M-ring protein signature. | |
>FLGMRINGFLIF#Flagellar M-ring protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
C730_01785 | FLGMOTORFLIG | 351 | e-123 | Flagellar motor switch protein FliG signature. | |
>FLGMOTORFLIG#Flagellar motor switch protein FliG signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
C730_01800 | TCRTETOQM | 141 | 8e-38 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
C730_01810 | DHBDHDRGNASE | 83 | 5e-21 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
C730_01825 | NUCEPIMERASE | 120 | 2e-33 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
C730_01835 | RTXTOXINA | 29 | 0.033 | Gram-negative bacterial RTX toxin determinant A family... | |
>RTXTOXINA#Gram-negative bacterial RTX toxin determinant A family |
22 | C730_02990 | C730_03020 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
C730_02990 | 2 | 13 | -0.946932 | hypothetical protein | |
C730_02995 | 2 | 14 | -0.246305 | hypothetical protein | |
C730_03000 | 1 | 16 | -0.337061 | dihydroorotase | |
C730_03005 | 0 | 16 | -2.568890 | hypothetical protein | |
C730_03010 | -2 | 14 | -2.893453 | hypothetical protein | |
C730_03015 | -2 | 14 | -2.297431 | flagellar motor switch protein | |
C730_03020 | -1 | 12 | -1.052315 | endonuclease III |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
C730_02990 | TYPE3IMSPROT | 30 | 0.006 | Type III secretion system inner membrane S protein ... | |
>TYPE3IMSPROT#Type III secretion system inner membrane S protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
C730_03005 | TONBPROTEIN | 53 | 3e-10 | Gram-negative bacterial tonB protein signature. | |
>TONBPROTEIN#Gram-negative bacterial tonB protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
C730_03015 | FLGMOTORFLIN | 99 | 2e-30 | Flagellar motor switch protein FliN signature. | |
>FLGMOTORFLIN#Flagellar motor switch protein FliN signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
C730_03020 | OMS28PORIN | 28 | 0.031 | OMS28 porin signature. | |
>OMS28PORIN#OMS28 porin signature. |
23 | C730_04640 | C730_04680 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
C730_04640 | 1 | 15 | 2.064982 | acetate kinase | |
C730_04645 | 1 | 15 | 2.534744 | acetate kinase A/propionate kinase 2 | |
C730_04650 | 1 | 15 | 1.707839 | phosphotransacetylase | |
C730_04665 | 2 | 14 | 0.862228 | phosphotransacetylase (pta) | |
C730_04670 | 0 | 14 | 0.733773 | hypothetical protein | |
C730_04675 | -2 | 13 | 1.459920 | flagellar basal body rod modification protein | |
C730_04680 | -1 | 14 | 1.875005 | flagellar hook protein FlgE |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
C730_04640 | ACETATEKNASE | 123 | 5e-37 | Acetate kinase family signature. | |
>ACETATEKNASE#Acetate kinase family signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
C730_04645 | ACETATEKNASE | 353 | e-123 | Acetate kinase family signature. | |
>ACETATEKNASE#Acetate kinase family signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
C730_04670 | IGASERPTASE | 36 | 5e-04 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
C730_04680 | FLGHOOKAP1 | 35 | 7e-04 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. |
24 | C730_06135 | C730_06185 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
C730_06135 | -1 | 15 | 0.047566 | arabinose transporter | |
C730_06140 | -1 | 16 | -1.358603 | hypothetical protein | |
C730_06145 | -1 | 14 | -0.646972 | alpha-carbonic anhydrase | |
C730_06150 | 0 | 17 | -1.331027 | hypothetical protein | |
C730_06155 | -1 | 15 | 0.172087 | hypothetical protein | |
C730_06160 | -3 | 10 | 2.186317 | aspartate-semialdehyde dehydrogenase | |
C730_06165 | -3 | 11 | 2.256036 | histidyl-tRNA ligase | |
C730_06170 | -2 | 12 | 3.133623 | ADP-heptose--LPS heptosyltransferase II | |
C730_06175 | 0 | 11 | 3.823061 | flagellar motility protein | |
C730_06180 | 0 | 12 | 3.870389 | aldo/keto reductase | |
C730_06185 | 1 | 12 | 4.050063 | elongation factor G |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
C730_06135 | TCRTETB | 49 | 2e-08 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
C730_06150 | IGASERPTASE | 31 | 0.011 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
C730_06155 | IGASERPTASE | 28 | 0.026 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
C730_06165 | ANTHRAXTOXNA | 31 | 0.012 | Anthrax toxin LF subunit signature. | |
>ANTHRAXTOXNA#Anthrax toxin LF subunit signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
C730_06185 | TCRTETOQM | 642 | 0.0 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family |
25 | C730_07515 | C730_07545 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
C730_07515 | 0 | 12 | 0.450151 | membrane protein insertase | |
C730_07520 | 0 | 10 | 0.364864 | hypothetical protein | |
C730_07525 | 0 | 9 | 0.992435 | tRNA modification GTPase TrmE | |
C730_07530 | 1 | 12 | 1.759731 | hypothetical protein | |
C730_07535 | -2 | 14 | 1.401695 | hypothetical protein | |
C730_07540 | -2 | 13 | 1.958175 | hypothetical protein | |
C730_07545 | -2 | 13 | 2.255959 | membrane-associated lipoprotein (lpp20) |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
C730_07515 | 60KDINNERMP | 431 | e-148 | 60kDa inner membrane protein signature. | |
>60KDINNERMP#60kDa inner membrane protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
C730_07520 | IGASERPTASE | 30 | 0.009 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
C730_07525 | TCRTETOQM | 31 | 0.008 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
C730_07545 | LIPOLPP20 | 293 | e-105 | LPP20 lipoprotein precursor signature. | |
>LIPOLPP20#LPP20 lipoprotein precursor signature. |
26 | C730_08070 | C730_08095 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
C730_08070 | -1 | 13 | 2.407790 | flagellar hook-basal body protein FliE | |
C730_08075 | -1 | 13 | 2.129144 | flagellar basal body rod protein FlgC | |
C730_08080 | 0 | 15 | 1.719126 | flagellar basal body rod protein FlgB | |
C730_08085 | 1 | 13 | 1.733852 | cell division protein FtsW | |
C730_08090 | 0 | 12 | 0.231817 | iron(III) ABC transporter periplasmic | |
C730_08095 | 1 | 13 | -0.097839 | iron(III) ABC transporter periplasmic |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
C730_08070 | FLGHOOKFLIE | 77 | 6e-22 | Flagellar hook-basal body complex protein FliE signa... | |
>FLGHOOKFLIE#Flagellar hook-basal body complex protein FliE | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
C730_08075 | FLGHOOKAP1 | 29 | 0.011 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
C730_08090 | FERRIBNDNGPP | 34 | 8e-04 | Ferrichrome-binding periplasmic protein signature. | |
>FERRIBNDNGPP#Ferrichrome-binding periplasmic protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
C730_08095 | FERRIBNDNGPP | 33 | 0.001 | Ferrichrome-binding periplasmic protein signature. | |
>FERRIBNDNGPP#Ferrichrome-binding periplasmic protein signature. |