| S.No | Start | End | Bias | Virulence | Insertion elements | Prediction |
| 1 | SPA0008 | SPA0034 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SPA0008 | 2 | 24 | 0.019720 | molybdopterin biosynthesis Mog protein | |
| SPA0009 | 1 | 17 | -2.349965 | hypothetical protein | |
| SPA0010 | 2 | 16 | -3.334979 | hypothetical protein | |
| SPA0011 | 0 | 16 | -3.845696 | hypothetical protein | |
| SPA0012 | 0 | 17 | -4.810924 | DnaK protein (heat shock protein 70) | |
| SPA0013 | -2 | 17 | -3.439914 | DnaJ protein | |
| SPA0014 | -1 | 19 | -4.580766 | regulatory protein | |
| SPA0015 | -2 | 17 | -2.900491 | hypothetical protein | |
| SPA0016 | -1 | 16 | -2.240189 | hypothetical protein | |
| SPA0017 | 0 | 16 | -1.227942 | hypothetical protein | |
| SPA0019 | 0 | 14 | -0.694872 | hydroxymethyltransferase | |
| SPA0020 | 1 | 15 | -1.865167 | hypothetical protein | |
| SPA0021 | 2 | 15 | -0.932423 | fimbrial subunit | |
| SPA0022 | 1 | 17 | -0.634060 | fimbrial chaperone | |
| SPA0023 | 1 | 18 | -0.976765 | fimbrial usher | |
| SPA0024 | 1 | 25 | -4.026011 | fimbrial subunit | |
| SPA0025 | -1 | 31 | -7.108225 | fimbrial subunit | |
| SPA0027 | 0 | 32 | -8.613609 | fimbrial chaperone | |
| SPA0028 | 0 | 30 | -9.579482 | hypothetical protein | |
| SPA0029 | 1 | 25 | -10.400724 | hypothetical protein | |
| SPA0030 | 1 | 23 | -10.175672 | hypothetical protein | |
| SPA0031 | 1 | 19 | -8.598422 | LysR family transcriptional regulator | |
| SPA0032 | 1 | 16 | -6.791080 | transcriptional regulator | |
| SPA0033 | 2 | 14 | -5.416093 | sulfatase | |
| SPA0034 | -1 | 11 | -3.682603 | 5'-nucleotidase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0012 | SHAPEPROTEIN | 141 | 3e-39 | Bacterial cell shape determinant MreB/Mbl protein s... | |
>SHAPEPROTEIN#Bacterial cell shape determinant MreB/Mbl protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0023 | PF00577 | 832 | 0.0 | Outer membrane usher protein FimD | |
>PF00577#Outer membrane usher protein FimD | |||||
| 2 | SPA0052 | SPA0065 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SPA0052 | 0 | 25 | 3.738715 | nucleoside hydrolase | |
| SPA0053 | -1 | 24 | 2.495726 | transcriptional regulatory protein citb | |
| SPA0054 | -1 | 23 | 2.928651 | transcriptional regulator | |
| SPA0055 | 0 | 27 | 5.129995 | oxaloacetate decarboxylase subunit beta | |
| SPA0056 | -2 | 19 | 3.243005 | oxaloacetate decarboxylase subunit alpha | |
| SPA0057 | -1 | 13 | 0.253352 | oxaloacetate decarboxylase subunit gamma | |
| SPA0058 | -1 | 11 | 0.408433 | citrate-sodium symporter | |
| SPA0059 | 0 | 10 | 1.704970 | [citrate (pro-3S)-lyase] ligase | |
| SPA0060 | -1 | 10 | 2.132702 | citrate lyase acyl carrier protein | |
| SPA0061 | -1 | 11 | 2.055702 | citrate lyase subunit beta | |
| SPA0062 | 0 | 20 | 3.562114 | citrate lyase subunit alpha | |
| SPA0063 | 0 | 20 | 3.227669 | hypothetical protein | |
| SPA0064 | 0 | 20 | 3.164783 | CitG protein | |
| SPA0065 | 0 | 23 | 3.315664 | dihydrodipicolinate reductase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0053 | HTHFIS | 69 | 7e-16 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0054 | CARBMTKINASE | 30 | 0.017 | Bacterial carbamate kinase signature. | |
>CARBMTKINASE#Bacterial carbamate kinase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0056 | RTXTOXIND | 32 | 0.007 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0059 | LPSBIOSNTHSS | 40 | 3e-06 | Lipopolysaccharide core biosynthesis protein signat... | |
>LPSBIOSNTHSS#Lipopolysaccharide core biosynthesis protein | |||||
| 3 | SPA0103 | SPA0109 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SPA0103 | -2 | 17 | 3.867512 | L-ribulose-5-phosphate 4-epimerase | |
| SPA0104 | 0 | 17 | 4.638373 | L-arabinose isomerase | |
| SPA0105 | 1 | 16 | 4.638741 | L-ribulokinase | |
| SPA0106 | 1 | 17 | 3.673894 | arabinose operon regulatory protein | |
| SPA0107 | 1 | 16 | 3.672114 | DedA family integral membrane protein | |
| SPA0108 | 0 | 16 | 4.088007 | ABC transporter | |
| SPA0109 | -1 | 17 | 3.916445 | ABC transporter integral membrane protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0109 | PF06580 | 31 | 0.017 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| 4 | SPA0152 | SPA0162 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SPA0152 | 2 | 26 | 1.025243 | glycosyl hydrolase | |
| SPA0153 | 3 | 32 | 1.058873 | symporter | |
| SPA0154 | 4 | 36 | 1.744676 | aromatic amino acid transport protein AroP | |
| SPA0155 | 4 | 36 | 1.860650 | pyruvate dehydrogenase complex repressor | |
| SPA0156 | 2 | 30 | 2.170060 | pyruvate dehydrogenase E1 component | |
| SPA0157 | 2 | 27 | 3.326244 | dihydrolipoamide acetyltransferase component | |
| SPA0158 | 0 | 22 | 3.349321 | dihydrolipoamide dehydrogenase | |
| SPA0159 | -2 | 15 | 4.091090 | secreted protein | |
| SPA0160 | -2 | 14 | 4.103358 | secreted protein | |
| SPA0161 | -2 | 13 | 3.868302 | hypothetical protein | |
| SPA0162 | -1 | 15 | 3.605396 | aconitate hydratase 2 |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0157 | RTXTOXIND | 35 | 7e-04 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| 5 | SPA0177 | SPA0209 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SPA0177 | 1 | 18 | -3.788667 | PTS system transporter subunit IIA | |
| SPA0178 | 2 | 16 | -3.007214 | hypothetical protein | |
| SPA0179 | 3 | 20 | -3.427571 | fimbrial protein | |
| SPA0180 | 3 | 20 | -3.889893 | fimbrial protein | |
| SPA0181 | 2 | 20 | -3.572743 | fimbrial protein | |
| SPA0182 | 0 | 17 | -2.911548 | fimbrial protein | |
| SPA0183 | 0 | 17 | -1.549602 | outer membrane usher protein | |
| SPA0184 | -2 | 17 | -0.556674 | fimbriae; chaparone | |
| SPA0185 | -2 | 19 | 1.568043 | major fimbrial subunit | |
| SPA0186 | -1 | 18 | 3.188113 | aspartate 1-decarboxylase | |
| SPA0187 | -1 | 19 | 3.159272 | pantoate:beta-alanine ligase | |
| SPA0188 | -2 | 16 | 2.459811 | 3-methyl-2-oxobutanoate | |
| SPA0189 | -1 | 15 | 2.764984 | 2-amino-4-hydroxy-6- | |
| SPA0190 | 0 | 11 | 3.802426 | poly(A) polymerase | |
| SPA0191 | -2 | 13 | 3.787922 | glutamyl-tRNA synthetase | |
| SPA0192 | -2 | 13 | 3.942554 | dosage-dependent dnaK suppressor protein | |
| SPA0193 | -2 | 14 | 4.342948 | sugar fermentation stimulation protein | |
| SPA0194 | -1 | 17 | 5.682380 | 2'-5' RNA ligase | |
| SPA0195 | -2 | 17 | 5.115934 | ATP-dependent helicase HrpB | |
| SPA0196 | -2 | 17 | 4.364326 | penicillin-binding protein 1b; peptidoglycan | |
| SPA0198 | 1 | 17 | 4.656909 | ferrichrome transport ATP-binding protein FhuC | |
| SPA0199 | 0 | 15 | 3.807309 | ferrichrome-binding periplasmic protein | |
| SPA0200 | -1 | 14 | 2.091733 | ferrichrome transport protein FhuB precursor | |
| SPA0201 | -1 | 13 | 0.439094 | fimbrial subunit | |
| SPA0203 | 0 | 12 | 1.575805 | periplasmic fimbrial chaperone | |
| SPA0204 | 1 | 13 | 1.283329 | minor fimbrial subunit | |
| SPA0206 | 1 | 13 | 1.407851 | minor fimbrial subunit | |
| SPA0207 | 0 | 12 | 1.782947 | hypothetical protein | |
| SPA0208 | 1 | 15 | 3.106768 | glutamate-1-semialdehyde 2,1-aminomutase | |
| SPA0209 | 2 | 14 | 0.396242 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0183 | PF00577 | 774 | 0.0 | Outer membrane usher protein FimD | |
>PF00577#Outer membrane usher protein FimD | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0199 | FERRIBNDNGPP | 501 | 0.0 | Ferrichrome-binding periplasmic protein signature. | |
>FERRIBNDNGPP#Ferrichrome-binding periplasmic protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0204 | FIMBRIALPAPE | 32 | 4e-04 | Escherichia coli: P pili tip fibrillum papE protein... | |
>FIMBRIALPAPE#Escherichia coli: P pili tip fibrillum papE protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0206 | FIMBRIALPAPE | 33 | 3e-04 | Escherichia coli: P pili tip fibrillum papE protein... | |
>FIMBRIALPAPE#Escherichia coli: P pili tip fibrillum papE protein | |||||
| 6 | SPA0286 | SPA0300 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SPA0286 | -1 | 12 | -3.232351 | DNA repair protein RecO | |
| SPA0287 | 0 | 16 | -4.404134 | pyridoxal phosphate biosynthetic protein | |
| SPA0288 | -1 | 17 | -4.344157 | holo-(acyl-carrier-protein) synthase | |
| SPA0289 | -1 | 17 | -3.382285 | ferredoxin | |
| SPA0290 | 1 | 16 | -1.922740 | transcriptional regulator | |
| SPA0291 | 0 | 17 | -0.053389 | transmembrane transport protein | |
| SPA0292 | -1 | 15 | 1.016618 | oxidoreductase | |
| SPA0293 | 0 | 14 | 1.653178 | transcriptional regulator | |
| SPA0294 | -2 | 12 | 3.389186 | phophosugar binding protein | |
| SPA0295 | -3 | 12 | 2.940523 | PTS system transporter subunit IIBC | |
| SPA0297 | -3 | 12 | 3.145242 | hypothetical protein | |
| SPA0298 | -2 | 12 | 2.990641 | hypothetical protein | |
| SPA0299 | -2 | 13 | 3.514342 | hypothetical protein | |
| SPA0300 | -2 | 13 | 3.682319 | phosphoribosylformylglycineamide synthetase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0291 | TCRTETB | 33 | 0.002 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| 7 | SPA0324 | SPA0362 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SPA0324 | 2 | 17 | 2.460493 | nifU-like protein | |
| SPA0325 | -1 | 16 | 3.131327 | hypothetical protein | |
| SPA0326 | 0 | 15 | 3.111196 | chaperone protein HscB | |
| SPA0327 | 0 | 14 | 1.757486 | chaperone protein HscA | |
| SPA0328 | -1 | 14 | 0.752609 | ferredoxin | |
| SPA0329 | 0 | 15 | 3.347788 | hypothetical protein | |
| SPA0330 | 0 | 13 | 4.442389 | peptidase B | |
| SPA0331 | 0 | 13 | 4.374049 | SseB protein | |
| SPA0333 | 0 | 14 | 4.826301 | hypothetical protein | |
| SPA0334 | -1 | 14 | 5.802757 | thiosulfate sulfurtransferase | |
| SPA0335 | 0 | 14 | 5.624216 | lipoprotein | |
| SPA0336 | 0 | 15 | 4.572892 | penicillin-binding protein 1C | |
| SPA0338 | 2 | 15 | 2.933377 | anaerobic reductase subunit | |
| SPA0339 | 1 | 16 | 2.835421 | anaerobic reductase subunit | |
| SPA0340 | 1 | 15 | 2.215834 | polyferredoxin | |
| SPA0341 | 1 | 16 | 1.433760 | nucleoside diphosphate kinase | |
| SPA0342 | 0 | 14 | 1.397194 | hypothetical protein | |
| SPA0343 | 0 | 15 | 1.898324 | DNA-binding protein | |
| SPA0344 | 0 | 16 | 1.247823 | GcpE protein (protein E) | |
| SPA0345 | 0 | 14 | 1.083140 | histidyl-tRNA synthetase | |
| SPA0346 | 0 | 15 | 3.363164 | hypothetical protein | |
| SPA0347 | 0 | 16 | 3.755723 | lipoprotein | |
| SPA0348 | 0 | 17 | 4.096888 | GTP-binding protein | |
| SPA0349 | 0 | 18 | 4.277814 | hypothetical protein | |
| SPA0351 | 1 | 19 | 4.355992 | hypothetical protein | |
| SPA0352 | 0 | 17 | 3.818270 | hypothetical protein | |
| SPA0355 | 3 | 19 | 1.433696 | exodeoxyribonuclease large subunit | |
| SPA0356 | 3 | 23 | -0.304913 | inosine-5'-monophosphate dehydrogenase | |
| SPA0357 | 3 | 22 | -2.546248 | GMP synthase | |
| SPA0358 | 5 | 39 | -7.772984 | hypothetical protein | |
| SPA0359 | 3 | 28 | -7.112750 | hypothetical protein | |
| SPA0360 | 3 | 20 | -4.561853 | hypothetical protein | |
| SPA0361 | 0 | 13 | -4.327145 | outer membrane lipoprotein | |
| SPA0362 | 0 | 12 | -3.573806 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0327 | SHAPEPROTEIN | 120 | 5e-32 | Bacterial cell shape determinant MreB/Mbl protein s... | |
>SHAPEPROTEIN#Bacterial cell shape determinant MreB/Mbl protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0360 | PYOCINKILLER | 29 | 0.008 | Pyocin S killer protein signature. | |
>PYOCINKILLER#Pyocin S killer protein signature. | |||||
| 8 | SPA0373 | SPA0384 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SPA0373 | 2 | 15 | 0.877874 | hypothetical protein | |
| SPA0375 | 1 | 16 | 0.068639 | hypothetical protein | |
| SPA0376 | 0 | 12 | 1.671584 | permease | |
| SPA0377 | -2 | 12 | 0.819575 | hypothetical protein | |
| SPA0378 | 0 | 11 | 0.201201 | bacterioferritin comigratory protein | |
| SPA0379 | -1 | 10 | 3.564362 | glycine cleavage system transcriptional | |
| SPA0380 | -1 | 12 | 4.095516 | dihydrodipicolinate synthase | |
| SPA0381 | -2 | 10 | 3.993681 | lipoprotein | |
| SPA0382 | -1 | 11 | 3.593808 | phosphoribosylaminoimidazolesuccinocarboxamide | |
| SPA0383 | -2 | 9 | 3.399215 | hypothetical protein | |
| SPA0384 | -2 | 10 | 3.795032 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0373 | SYCDCHAPRONE | 38 | 4e-05 | Gram-negative bacterial type III secretion SycD cha... | |
>SYCDCHAPRONE#Gram-negative bacterial type III secretion SycD | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0375 | HTHFIS | 32 | 0.003 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0384 | AUTOINDCRSYN | 31 | 0.009 | Autoinducer synthesis protein signature. | |
>AUTOINDCRSYN#Autoinducer synthesis protein signature. | |||||
| 9 | SPA0397 | SPA0415 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SPA0397 | 0 | 16 | 3.602042 | NADP-dependent malate dehydrogenase | |
| SPA0398 | 1 | 20 | 4.487174 | ethanolamine utilization protein EutS | |
| SPA0399 | 1 | 20 | 5.122381 | ethanolamine utilization protein | |
| SPA0400 | 2 | 22 | 6.233493 | ethanolamine utilization protein | |
| SPA0401 | 2 | 22 | 7.011683 | cobalamin adenosyltransferase | |
| SPA0402 | 4 | 22 | 7.840363 | phosphate acyltransferase | |
| SPA0403 | 3 | 23 | 6.792308 | ethanolamine utilization protein EutN | |
| SPA0404 | 2 | 21 | 6.964928 | ethanolamine utilization protein EutN | |
| SPA0405 | 1 | 25 | 6.444296 | aldehyde dehydrogenase | |
| SPA0406 | 1 | 25 | 6.566295 | ethanolamine utilization protein EutJ | |
| SPA0407 | 1 | 24 | 6.259369 | alchohol dehydrogenase | |
| SPA0408 | 0 | 23 | 5.767968 | hypothetical protein | |
| SPA0409 | -1 | 18 | 5.203690 | ethanolamine utilization protein EutA | |
| SPA0410 | -1 | 16 | 4.275649 | ethanolamine ammonia-lyase heavy chain | |
| SPA0411 | 0 | 14 | 3.287880 | ethanolamine ammonia-lyase light chain | |
| SPA0412 | 0 | 14 | 2.110338 | ethanolamine utilization protein EutL | |
| SPA0413 | 1 | 13 | 1.434974 | ethanolamine utilization protein EutK | |
| SPA0414 | 1 | 11 | 0.775143 | ethanolamine operon transcriptional regulator | |
| SPA0415 | 2 | 13 | 1.204899 | coproporphyrinogen III oxidase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0406 | SHAPEPROTEIN | 49 | 9e-09 | Bacterial cell shape determinant MreB/Mbl protein s... | |
>SHAPEPROTEIN#Bacterial cell shape determinant MreB/Mbl protein | |||||
| 10 | SPA0424 | SPA0468 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SPA0424 | -3 | 15 | 3.123291 | sulfate transport system permease CysW | |
| SPA0425 | -2 | 15 | 3.356253 | sulfate transport ATP-binding protein CysA | |
| SPA0426 | -1 | 16 | 2.962556 | cysteine synthase B | |
| SPA0427 | -2 | 14 | 1.599365 | hypothetical protein | |
| SPA0428 | -1 | 14 | 0.936775 | GMP synthase | |
| SPA0429 | 1 | 15 | 0.926749 | transcriptional regulator | |
| SPA0430 | 2 | 19 | -0.531866 | pyridoxine kinase | |
| SPA0431 | 2 | 23 | -1.147702 | hypothetical protein | |
| SPA0432 | 1 | 22 | -0.362659 | pts system, glucose-specific IIA component | |
| SPA0433 | 0 | 15 | 1.256007 | hypothetical protein | |
| SPA0434 | -1 | 14 | 2.122886 | phosphocarrier protein HPr | |
| SPA0435 | -1 | 15 | 2.237801 | cysteine synthase A | |
| SPA0436 | 0 | 14 | 2.677405 | sulfate transport protein CysZ | |
| SPA0437 | 0 | 16 | 2.837137 | cell division protein | |
| SPA0438 | 0 | 16 | 2.048137 | DNA ligase | |
| SPA0439 | 2 | 15 | 0.983349 | hypothetical protein | |
| SPA0440 | 0 | 11 | -0.149999 | hypothetical protein | |
| SPA0441 | -1 | 10 | -0.170000 | transcriptional regulator | |
| SPA0446 | -2 | 11 | -0.588904 | ****glutamyl-tRNA synthetase | |
| SPA0447 | -2 | 12 | -0.914154 | hypothetical protein | |
| SPA0448 | -1 | 11 | 1.051469 | hypothetical protein | |
| SPA0450 | -1 | 11 | 1.979497 | *hypothetical protein | |
| SPA0452 | 1 | 12 | 3.153180 | manganese transport protein MntH | |
| SPA0453 | 1 | 13 | 3.039402 | hypothetical protein | |
| SPA0454 | 1 | 13 | 2.853672 | ion-channel protein | |
| SPA0455 | 1 | 13 | 2.645842 | decarboxylase | |
| SPA0456 | 1 | 13 | 0.264346 | hypothetical protein | |
| SPA0457 | 0 | 12 | -0.885557 | glucokinase | |
| SPA0458 | -2 | 12 | -1.045648 | aminotransferase | |
| SPA0459 | -1 | 15 | -2.309747 | acyltransferase | |
| SPA0460 | 2 | 30 | -7.721885 | hypothetical protein | |
| SPA0461 | 1 | 30 | -8.131565 | phosphoglycerate transporter protein | |
| SPA0462 | 1 | 35 | -9.371880 | phosphoglycerate transport regulatory protein | |
| SPA0464 | 2 | 35 | -10.497801 | phosphoglycerate transport system | |
| SPA0465 | 3 | 35 | -11.095416 | outer membrane protease E | |
| SPA0467 | 2 | 30 | -9.348130 | lipopolysaccharide modification acyltransferase | |
| SPA0468 | 0 | 15 | -3.413203 | bactoprenol glucosyl transferase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0425 | PF05272 | 34 | 8e-04 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0433 | PHPHTRNFRASE | 748 | 0.0 | Phosphoenolpyruvate-protein phosphotransferase sign... | |
>PHPHTRNFRASE#Phosphoenolpyruvate-protein phosphotransferase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0437 | PF03544 | 42 | 1e-06 | Gram-negative bacterial tonB protein | |
>PF03544#Gram-negative bacterial tonB protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0441 | RTXTOXINC | 29 | 0.010 | Gram-negative bacterial RTX toxin-activating protein C... | |
>RTXTOXINC#Gram-negative bacterial RTX toxin-activating protein C | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0448 | BINARYTOXINA | 27 | 0.027 | Clostridial binary toxin A signature. | |
>BINARYTOXINA#Clostridial binary toxin A signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0461 | TCRTETA | 31 | 0.007 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0464 | HTHFIS | 248 | 6e-80 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0465 | OMPTIN | 472 | e-172 | Omptin serine protease signature. | |
>OMPTIN#Omptin serine protease signature. | |||||
| 11 | SPA0480 | SPA0495 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SPA0480 | -1 | 14 | 3.548537 | chorismate synthase | |
| SPA0481 | -2 | 12 | 3.192624 | penicillin-insensitive murein endopeptidase | |
| SPA0482 | -2 | 12 | 0.893999 | hypothetical protein | |
| SPA0483 | -2 | 13 | 0.569691 | hypothetical protein | |
| SPA0484 | -2 | 14 | 0.355406 | hypothetical protein | |
| SPA0485 | -3 | 14 | 0.108933 | hypothetical protein | |
| SPA0486 | -1 | 21 | -2.682798 | 3-oxoacyl-ACP synthase | |
| SPA0487 | 2 | 23 | -1.361272 | hypothetical protein | |
| SPA0488 | -1 | 18 | 1.552236 | lipoprotein | |
| SPA0489 | -3 | 14 | 2.471446 | hypothetical protein | |
| SPA0490 | -2 | 14 | 3.255774 | DNA-binding protein | |
| SPA0491 | -2 | 15 | 3.539707 | bacteriophage protein | |
| SPA0492 | -1 | 14 | 3.261133 | transmembrane transporter | |
| SPA0493 | -1 | 13 | 2.439735 | Div protein | |
| SPA0494 | -1 | 14 | 3.163015 | erythronate-4-phosphate dehydrogenase | |
| SPA0495 | -1 | 15 | 3.352834 | semialdehyde dehydrogenase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0492 | TCRTETA | 42 | 3e-06 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| 12 | SPA0536 | SPA0558 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SPA0536 | -2 | 26 | 4.108797 | NADH dehydrogenase I subunit A | |
| SPA0537 | -1 | 27 | 4.035238 | NADH dehydrogenase I subunit B | |
| SPA0538 | -1 | 29 | 4.084342 | NADH dehydrogenase I subunit CD | |
| SPA0539 | -1 | 29 | 4.248845 | NADH dehydrogenase I subunit E | |
| SPA0540 | -1 | 29 | 4.187921 | NADH dehydrogenase I subunit F | |
| SPA0541 | 1 | 29 | 4.057723 | NADH dehydrogenase I subunit G | |
| SPA0542 | 2 | 30 | 2.975561 | NADH dehydrogenase I subunit H | |
| SPA0543 | 3 | 31 | 3.999952 | NADH dehydrogenase I subunit I | |
| SPA0544 | 2 | 29 | 3.400929 | NADH dehydrogenase I subunit J | |
| SPA0545 | 1 | 24 | 3.211122 | NADH dehydrogenase I subunit K | |
| SPA0546 | 1 | 23 | 3.126517 | NADH dehydrogenase I subunit L | |
| SPA0547 | 0 | 18 | 2.350521 | NADH dehydrogenase I subunit M | |
| SPA0548 | -1 | 12 | 2.547228 | NADH dehydrogenase I subunit N | |
| SPA0549 | -1 | 13 | 2.746290 | receptor/regulator protein | |
| SPA0550 | -1 | 13 | 3.983417 | hydrolase | |
| SPA0551 | -1 | 13 | 4.084342 | hypothetical protein | |
| SPA0552 | -1 | 12 | 4.804456 | hypothetical protein | |
| SPA0553 | 0 | 12 | 5.567396 | isochorismate synthase | |
| SPA0554 | 0 | 13 | 5.579170 | menaquinone biosynthesis protein | |
| SPA0555 | 0 | 13 | 4.861791 | hypothetical protein | |
| SPA0556 | 1 | 13 | 4.700499 | naphthoate synthase | |
| SPA0557 | -1 | 15 | 3.708240 | O-succinylbenzoate-CoA synthase | |
| SPA0558 | 0 | 15 | 3.072974 | O-succinylbenzoic acid--CoA ligase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0537 | FLGBIOSNFLIP | 28 | 0.019 | Escherichia coli: Flagellar biosynthetic protein Fl... | |
>FLGBIOSNFLIP#Escherichia coli: Flagellar biosynthetic protein FliP | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0549 | HTHFIS | 46 | 2e-07 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0551 | AUTOINDCRSYN | 30 | 0.002 | Autoinducer synthesis protein signature. | |
>AUTOINDCRSYN#Autoinducer synthesis protein signature. | |||||
| 13 | SPA0585 | SPA0619 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SPA0585 | -1 | 15 | -3.884030 | ferredoxin | |
| SPA0586 | -1 | 13 | -5.078652 | ribonucleoside-diphosphate reductase 1 subunit | |
| SPA0587 | -1 | 13 | -3.266714 | ribonucleoside-diphosphate reductase 1 subunit | |
| SPA0588 | -2 | 9 | -2.991626 | 3-demethylubiquinone-9 3-methyltransferase | |
| SPA0589 | -1 | 9 | -3.426570 | hypothetical protein | |
| SPA0590 | -1 | 9 | -2.383113 | hypothetical protein | |
| SPA0591 | 0 | 13 | -1.096877 | MR-MLE-family protein | |
| SPA0592 | 0 | 14 | 0.307383 | DNA gyrase subunit A | |
| SPA0593 | -2 | 12 | 0.501652 | sensor protein RcsC | |
| SPA0594 | -2 | 13 | 1.025684 | regulator of capsule synthesis B component | |
| SPA0595 | -3 | 11 | 1.450725 | two-component system sensor kinase | |
| SPA0597 | -2 | 15 | 2.959943 | outer membrane protein C | |
| SPA0598 | -1 | 14 | 3.613631 | thiamine biosynthesis protein | |
| SPA0599 | -2 | 14 | 3.473471 | ADA regulatory protein | |
| SPA0600 | -2 | 15 | 2.795332 | AlkB protein | |
| SPA0601 | -1 | 16 | 2.922495 | ABC transporter ATP-binding protein | |
| SPA0602 | 0 | 14 | 3.085497 | ecotin precursor | |
| SPA0603 | 0 | 17 | 3.302298 | ferredoxin-type protein NapF | |
| SPA0604 | 0 | 18 | 2.782784 | napAB assembly protein | |
| SPA0605 | 0 | 21 | 4.691342 | nitrate reductase | |
| SPA0606 | 1 | 29 | 7.423357 | ferredoxin-type protein NapG | |
| SPA0607 | 2 | 34 | 8.400744 | ferredoxin-type protein NapH | |
| SPA0608 | 3 | 41 | 10.986420 | cytochrome c-type protein NapB precursor | |
| SPA0609 | 4 | 47 | 12.125596 | cytochrome c-type protein NapC | |
| SPA0610 | 8 | 56 | 15.029081 | heme exporter protein A1 | |
| SPA0611 | 7 | 53 | 13.631854 | heme exporter protein B1 | |
| SPA0612 | 6 | 53 | 13.404905 | heme exporter protein C1 | |
| SPA0613 | 4 | 47 | 11.724712 | heme exporter protein D1 | |
| SPA0614 | 3 | 43 | 10.236964 | cytochrome c-type biogenesis protein E1 | |
| SPA0615 | 2 | 38 | 8.957309 | cytochrome c-type biogenesis protein F1 | |
| SPA0616 | 0 | 20 | 2.669705 | thiol:disulfide interchange protein | |
| SPA0617 | 1 | 16 | 1.678536 | cytochrome c-type biogenesis protein H1 | |
| SPA0618 | 0 | 11 | -1.829620 | nitrate/nitrite response regulator protein NarP | |
| SPA0619 | 0 | 14 | -3.105303 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0589 | NUCEPIMERASE | 28 | 0.031 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0590 | TCRTETB | 31 | 0.012 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0593 | HTHFIS | 80 | 1e-17 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0594 | HTHFIS | 48 | 8e-09 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0597 | ECOLIPORIN | 540 | 0.0 | E.coli/Salmonella-type porin signature. | |
>ECOLIPORIN#E.coli/Salmonella-type porin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0614 | PF04335 | 29 | 0.006 | VirB8 type IV secretion protein | |
>PF04335#VirB8 type IV secretion protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0618 | HTHFIS | 68 | 2e-15 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 14 | SPA0661 | SPA0738 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SPA0661 | 2 | 15 | -2.445709 | D-galactose-binding periplasmic protein | |
| SPA0663 | 3 | 15 | -1.695800 | galactoside transport system permease protein | |
| SPA0664 | 4 | 18 | -1.103761 | dihydropyrimidine dehydrogenase | |
| SPA0665 | 4 | 20 | -1.356736 | oxidoreductase | |
| SPA0666 | 2 | 18 | -0.262597 | hypothetical protein | |
| SPA0667 | 2 | 17 | 1.911285 | vancomycin resistance protein | |
| SPA0668 | 1 | 16 | 2.596670 | cytidine deaminase | |
| SPA0669 | -1 | 14 | 2.310666 | hypothetical protein | |
| SPA0670 | -2 | 14 | 2.358040 | hypothetical protein | |
| SPA0671 | -1 | 15 | 3.709536 | transcriptional regulator | |
| SPA0672 | 0 | 16 | 4.064792 | n-hydroxybenzoate transporter | |
| SPA0673 | 0 | 18 | 2.977652 | gentisate 1,2-dioxygenase | |
| SPA0674 | 0 | 17 | 3.294424 | FAA-hydrolase-family protein | |
| SPA0675 | 1 | 18 | 3.236567 | glutathione-S-transferase-family protein | |
| SPA0676 | 2 | 18 | 3.434880 | n-hydroxybenzoate hydroxylase | |
| SPA0677 | 1 | 17 | 2.443771 | hypothetical protein | |
| SPA0678 | 2 | 14 | 1.758946 | hypothetical protein | |
| SPA0679 | 1 | 14 | 1.857721 | lipoprotein | |
| SPA0680 | 0 | 14 | 1.101690 | oxidoreductase | |
| SPA0681 | -1 | 13 | 1.215047 | hypothetical protein | |
| SPA0682 | -2 | 13 | 1.740639 | hypothetical protein | |
| SPA0683 | -1 | 12 | 2.035189 | penicillin-binding protein 7 | |
| SPA0684 | -2 | 13 | 2.594489 | D-lactate dehydrogenase | |
| SPA0685 | -2 | 15 | 3.179665 | periplasmic beta-glucosidase | |
| SPA0686 | -2 | 17 | 3.842394 | hypothetical protein | |
| SPA0687 | -1 | 17 | 2.813128 | permease | |
| SPA0688 | -2 | 16 | 1.184833 | ABC transporter ATP-binding protein | |
| SPA0689 | -2 | 17 | 0.213781 | permease | |
| SPA0690 | -2 | 13 | -2.361289 | hypothetical protein | |
| SPA0691 | -2 | 13 | -3.188403 | transcriptional regulator | |
| SPA0692 | -1 | 11 | -2.006075 | two-component system sensor kinase | |
| SPA0693 | -1 | 11 | -1.483474 | two-component system response regulator | |
| SPA0694 | -2 | 13 | -1.581140 | hypothetical protein | |
| SPA0695 | -2 | 14 | -2.776608 | lipoprotein | |
| SPA0696 | -2 | 13 | -3.244820 | lipoprotein | |
| SPA0697 | -1 | 13 | -3.979751 | methionyl-tRNA synthetase | |
| SPA0698 | 2 | 27 | -7.179698 | hypothetical protein | |
| SPA0699 | 3 | 35 | -9.149765 | hypothetical protein | |
| SPA0700 | 1 | 29 | -7.028106 | fimbrial subunit protein | |
| SPA0701 | 1 | 23 | -4.550018 | fimbrial chaperone protein | |
| SPA0702 | 1 | 21 | -2.981654 | outer membrane usher protein | |
| SPA0703 | 1 | 19 | 0.981619 | hypothetical protein | |
| SPA0704 | 1 | 18 | 4.668621 | hypothetical protein | |
| SPA0705 | 0 | 14 | 3.821287 | hydroxyethylthiazole kinase | |
| SPA0706 | 0 | 14 | 2.660805 | phosphomethylpyrimidine kinase | |
| SPA0707 | -1 | 14 | 1.963126 | GntR family transcriptional regulator | |
| SPA0708 | -1 | 15 | 2.006297 | sugar kinase | |
| SPA0709 | -1 | 15 | -0.843904 | hydrolase | |
| SPA0710 | -1 | 16 | -2.691004 | nucleoside permease | |
| SPA0711 | 1 | 19 | -1.719275 | fructose-bisphosphate aldolase | |
| SPA0712 | -1 | 18 | -2.721944 | diacylglycerol kinase catalytic domain | |
| SPA0713 | 0 | 22 | -4.486806 | hypothetical protein | |
| SPA0714 | 0 | 23 | -6.579970 | hypothetical protein | |
| SPA0715 | 0 | 21 | -5.785519 | hypothetical protein | |
| SPA0716 | 0 | 20 | -7.517285 | protease | |
| SPA0717 | 7 | 51 | -14.907606 | hypothetical protein | |
| SPA0718 | 10 | 59 | -18.995890 | hypothetical protein | |
| SPA0719 | 10 | 61 | -19.821320 | hypothetical protein | |
| SPA0720 | 11 | 61 | -20.763008 | hypothetical protein | |
| SPA0721 | 11 | 60 | -21.913834 | hypothetical protein | |
| SPA0722 | 10 | 61 | -21.249496 | hypothetical protein | |
| SPA0723 | 10 | 59 | -21.096370 | hypothetical protein | |
| SPA0724 | 9 | 61 | -21.258778 | hypothetical protein | |
| SPA0725 | 4 | 47 | -16.572777 | hypothetical protein | |
| SPA0726 | 1 | 25 | -8.735207 | hypothetical protein | |
| SPA0727 | 0 | 18 | -5.512691 | hypothetical protein | |
| SPA0728 | 0 | 16 | -3.947105 | hypothetical protein | |
| SPA0729 | 0 | 13 | -2.437493 | hypothetical protein | |
| SPA0730 | -1 | 14 | 0.973326 | hypothetical protein | |
| SPA0731 | -2 | 12 | 0.999485 | hypothetical protein | |
| SPA0732 | -1 | 14 | 2.148384 | hypothetical protein | |
| SPA0733 | -2 | 14 | 2.785807 | hypothetical protein | |
| SPA0734 | -1 | 15 | 3.752068 | two-component system response regulator | |
| SPA0735 | -1 | 16 | 4.259376 | two-component system sensor kinase | |
| SPA0736 | -1 | 16 | 3.499820 | transporter protein | |
| SPA0737 | -1 | 15 | 3.229573 | RND-family transporter protein | |
| SPA0738 | 0 | 15 | 3.368001 | RND-family transporter protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0672 | TCRTETB | 51 | 4e-09 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0680 | DHBDHDRGNASE | 115 | 2e-33 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0681 | BCTERIALGSPF | 27 | 0.034 | Bacterial general secretion pathway protein F signa... | |
>BCTERIALGSPF#Bacterial general secretion pathway protein F | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0683 | BLACTAMASEA | 37 | 5e-05 | Beta-lactamase class A signature. | |
>BLACTAMASEA#Beta-lactamase class A signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0692 | PF06580 | 219 | 1e-68 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0693 | HTHFIS | 76 | 6e-18 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0700 | FIMBRIALPAPE | 28 | 0.012 | Escherichia coli: P pili tip fibrillum papE protein... | |
>FIMBRIALPAPE#Escherichia coli: P pili tip fibrillum papE protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0702 | PF00577 | 675 | 0.0 | Outer membrane usher protein FimD | |
>PF00577#Outer membrane usher protein FimD | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0704 | TYPE3OMGPROT | 27 | 0.019 | Type III secretion system outer membrane G protein ... | |
>TYPE3OMGPROT#Type III secretion system outer membrane G protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0710 | TCRTETA | 36 | 2e-04 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0713 | RTXTOXINA | 27 | 0.020 | Gram-negative bacterial RTX toxin determinant A family... | |
>RTXTOXINA#Gram-negative bacterial RTX toxin determinant A family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0714 | PF05932 | 84 | 5e-24 | Tir chaperone protein (CesT) | |
>PF05932#Tir chaperone protein (CesT) | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0734 | HTHFIS | 75 | 8e-18 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0735 | BCTERIALGSPF | 31 | 0.010 | Bacterial general secretion pathway protein F signa... | |
>BCTERIALGSPF#Bacterial general secretion pathway protein F | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0736 | TCRTETB | 124 | 3e-33 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0737 | ACRIFLAVINRP | 875 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0738 | ACRIFLAVINRP | 885 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| 15 | SPA0751 | SPA0789 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SPA0751 | 2 | 15 | -2.898682 | hypothetical protein | |
| SPA0752 | 1 | 15 | -1.660260 | acetyltransferase | |
| SPA0753 | 0 | 16 | -0.760715 | glycosyltransferase | |
| SPA0754 | 0 | 16 | -0.852130 | colanic acid polymerase | |
| SPA0755 | 0 | 18 | 2.474797 | glycosyltransferase | |
| SPA0756 | -1 | 24 | 4.469483 | acetyltransferase | |
| SPA0757 | 0 | 32 | 5.955715 | GDP-mannose 4,6-dehydratase | |
| SPA0758 | -1 | 28 | 4.780411 | GDP-fucose synthetase | |
| SPA0759 | -1 | 26 | 4.357348 | O-antigen biosynthesis protein | |
| SPA0760 | 0 | 21 | 3.020116 | glycosyltransferase | |
| SPA0761 | 0 | 17 | 1.212820 | mannose-1-phosphate guanylyltransferase | |
| SPA0762 | -1 | 13 | -0.422088 | phosphomannomutase | |
| SPA0764 | -1 | 16 | -3.304395 | transmembrane transport protein | |
| SPA0766 | -1 | 20 | -4.605747 | glycosyl transferase family protein | |
| SPA0767 | 1 | 29 | -7.431933 | hypothetical protein | |
| SPA0769 | 4 | 37 | -9.111934 | dTDP-glucose 4,6-dehydratase | |
| SPA0770 | 5 | 40 | -9.196286 | dTDP-4-dehydrorhamnose reductase | |
| SPA0771 | 8 | 42 | -10.181874 | TDP-glucose pyrophosphorylase | |
| SPA0772 | 9 | 46 | -11.903907 | dTDP-4-dehydrorhamnose 3,5-epimerase | |
| SPA0773 | 9 | 49 | -12.863714 | reductase RfbI | |
| SPA0774 | 7 | 52 | -14.712838 | glucose-1-phosphate cytidylyltransferase | |
| SPA0775 | 7 | 55 | -16.252676 | CDP-glucose 4,6-dehydratase | |
| SPA0776 | 8 | 59 | -18.248413 | dehydratase RfbH | |
| SPA0777 | 8 | 64 | -20.507307 | paratose synthase | |
| SPA0778 | 8 | 65 | -20.719682 | CDP-tyvelose-2-epimerase | |
| SPA0779 | 6 | 65 | -21.098343 | O-antigen transporter | |
| SPA0780 | 6 | 63 | -20.717344 | glycosyl transferase family protein | |
| SPA0781 | 6 | 62 | -20.044223 | glycosyltransferase | |
| SPA0782 | 4 | 58 | -18.268518 | glycosyl transferase family protein | |
| SPA0783 | 4 | 57 | -16.802879 | glycosyltransferase | |
| SPA0784 | 4 | 56 | -15.927411 | glycosyl transferase family protein | |
| SPA0785 | 2 | 44 | -12.657712 | glycosyltransferase | |
| SPA0786 | 2 | 40 | -11.401833 | rhamnosyltransferase | |
| SPA0787 | 1 | 34 | -9.694400 | mannose-1-phosphate guanylyltransferase | |
| SPA0788 | 1 | 28 | -8.220911 | phosphomannomutase | |
| SPA0789 | -2 | 19 | -6.014695 | undecaprenyl-phosphate |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0757 | NUCEPIMERASE | 106 | 2e-28 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0758 | NUCEPIMERASE | 88 | 6e-22 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0769 | NUCEPIMERASE | 176 | 1e-54 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0770 | NUCEPIMERASE | 41 | 3e-06 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0775 | NUCEPIMERASE | 73 | 1e-16 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0776 | PERTACTIN | 31 | 0.012 | Pertactin signature. | |
>PERTACTIN#Pertactin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0777 | NUCEPIMERASE | 64 | 6e-14 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0778 | NUCEPIMERASE | 157 | 2e-47 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| 16 | SPA0813 | SPA0843 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SPA0813 | -1 | 16 | 3.483143 | hypothetical protein | |
| SPA0814 | -1 | 20 | 4.512334 | propionate kinase | |
| SPA0815 | 0 | 25 | 5.770481 | propanediol utilization protein PduV | |
| SPA0816 | 1 | 26 | 6.258271 | propanediol utilization protein PduU | |
| SPA0817 | 1 | 26 | 6.676313 | propanediol utilization protein PduT | |
| SPA0818 | 2 | 24 | 6.958389 | ferredoxin | |
| SPA0819 | 3 | 24 | 6.446243 | propanol dehydrogenase | |
| SPA0820 | 3 | 23 | 5.834545 | CoA-dependent proprionaldehyde dehydrogenase | |
| SPA0821 | 3 | 23 | 6.019431 | hypothetical protein | |
| SPA0822 | 4 | 21 | 5.299421 | Propanediol utilization: polyhedral bodies | |
| SPA0823 | 1 | 22 | 5.487091 | hypothetical protein | |
| SPA0824 | 0 | 21 | 4.836655 | hypothetical protein | |
| SPA0825 | -1 | 24 | 4.536084 | propanediol utilization protein PduK | |
| SPA0826 | 0 | 29 | 4.435353 | propanediol utilization protein PduJ | |
| SPA0827 | 1 | 30 | 4.918674 | PduH protein | |
| SPA0828 | 1 | 30 | 4.680476 | PduG protein | |
| SPA0829 | 0 | 23 | 1.484312 | diol dehydratase small subunit | |
| SPA0830 | -2 | 19 | 2.167619 | diol dehydratase medium subunit | |
| SPA0831 | -2 | 16 | 1.962008 | glycerol dehydratase large subunit | |
| SPA0832 | -1 | 15 | 1.479007 | propanediol utilization protein PduB | |
| SPA0833 | -1 | 15 | 0.968242 | propanediol utilization protein PduA | |
| SPA0835 | -1 | 18 | 1.282005 | pdu/cob regulatory protein PocR | |
| SPA0837 | -1 | 16 | 3.692094 | CbiB protein | |
| SPA0838 | -1 | 16 | 2.840541 | synthesis of vitamin B12 adenosyl cobalamide | |
| SPA0839 | -2 | 13 | 2.998934 | CbiD protein | |
| SPA0840 | -3 | 14 | 3.774087 | precorrin-6Y C5,15-methyltransferase | |
| SPA0841 | -2 | 13 | 3.302081 | precorrin-8W decarboxylase | |
| SPA0842 | -2 | 12 | 3.497854 | precorrin-4 C(11)-methyltransferase | |
| SPA0843 | -1 | 15 | 3.030227 | CbiG protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0814 | ACETATEKNASE | 582 | 0.0 | Acetate kinase family signature. | |
>ACETATEKNASE#Acetate kinase family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0815 | SALSPVBPROT | 27 | 0.047 | Salmonella virulence plasmid 65kDa B protein signature. | |
>SALSPVBPROT#Salmonella virulence plasmid 65kDa B protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0819 | BONTOXILYSIN | 30 | 0.014 | Bontoxilysin signature. | |
>BONTOXILYSIN#Bontoxilysin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0825 | TONBPROTEIN | 28 | 0.019 | Gram-negative bacterial tonB protein signature. | |
>TONBPROTEIN#Gram-negative bacterial tonB protein signature. | |||||
| 17 | SPA0857 | SPA0871 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SPA0857 | -1 | 28 | -3.212990 | hypothetical protein | |
| SPA0861 | 0 | 27 | -3.437038 | **hypothetical protein | |
| SPA0862 | 0 | 22 | -2.796673 | hypothetical protein | |
| SPA0863 | 0 | 21 | -1.757276 | hypothetical protein | |
| SPA0864 | -1 | 20 | -1.416453 | AMP nucleosidase | |
| SPA0866 | 2 | 24 | -1.429134 | *hypothetical protein | |
| SPA0867 | 2 | 23 | -1.931075 | hypothetical protein | |
| SPA0869 | 2 | 20 | -1.964298 | *hypothetical protein | |
| SPA0871 | 2 | 20 | -1.268027 | *hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0864 | PF03627 | 37 | 1e-04 | PapG | |
>PF03627#PapG | |||||
| 18 | SPA0884 | SPA0898 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SPA0884 | 0 | 16 | -3.788943 | hypothetical protein | |
| SPA0886 | 0 | 16 | -4.396466 | hypothetical protein | |
| SPA0887 | 1 | 16 | -2.813016 | DsrB protein | |
| SPA0888 | 0 | 16 | -2.446033 | colanic acid capsullar biosynthesis activation | |
| SPA0889 | 0 | 13 | 0.443089 | flagellar biosynthetic protein FliR | |
| SPA0890 | -1 | 14 | 1.174655 | flagellar biosynthetic protein FliQ | |
| SPA0891 | -1 | 15 | 3.273445 | flagellar biosynthetic protein FliP | |
| SPA0892 | 0 | 14 | 3.210124 | flagellar protein FliO | |
| SPA0893 | -2 | 14 | 3.844192 | flagellar motor switch protein FliN | |
| SPA0894 | -1 | 17 | 4.568567 | flagellar motor switch protein FliM | |
| SPA0895 | 1 | 15 | 4.860523 | FliL protein | |
| SPA0896 | 0 | 13 | 4.834891 | flagellar hook-length control protein | |
| SPA0897 | -1 | 13 | 4.093197 | flagellar FliJ protein | |
| SPA0898 | -2 | 13 | 3.627967 | flagellum-specific ATP synthase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0889 | TYPE3IMRPROT | 213 | 5e-71 | Type III secretion system inner membrane R protein ... | |
>TYPE3IMRPROT#Type III secretion system inner membrane R protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0890 | TYPE3IMQPROT | 67 | 1e-18 | Type III secretion system inner membrane Q protein ... | |
>TYPE3IMQPROT#Type III secretion system inner membrane Q protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0891 | FLGBIOSNFLIP | 328 | e-117 | Escherichia coli: Flagellar biosynthetic protein Fl... | |
>FLGBIOSNFLIP#Escherichia coli: Flagellar biosynthetic protein FliP | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0893 | FLGMOTORFLIN | 209 | 2e-73 | Flagellar motor switch protein FliN signature. | |
>FLGMOTORFLIN#Flagellar motor switch protein FliN signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0894 | FLGMOTORFLIM | 383 | e-135 | Flagellar motor switch protein FliM signature. | |
>FLGMOTORFLIM#Flagellar motor switch protein FliM signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0896 | FLGHOOKFLIK | 406 | e-143 | Flagellar hook-length control protein signature. | |
>FLGHOOKFLIK#Flagellar hook-length control protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0897 | FLGFLIJ | 206 | 4e-72 | Flagellar FliJ protein signature. | |
>FLGFLIJ#Flagellar FliJ protein signature. | |||||
| 19 | SPA0992 | SPA1017 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SPA0992 | 2 | 24 | -1.178559 | hypothetical protein | |
| SPA0993 | 2 | 26 | -1.437708 | DNA polymerase III, theta subunit | |
| SPA0994 | 2 | 26 | -4.211724 | cation resistance protein | |
| SPA0995 | 2 | 33 | -8.470246 | cation transporter | |
| SPA0996 | 3 | 34 | -10.424614 | hypothetical protein | |
| SPA0997 | 4 | 35 | -10.462949 | hypothetical protein | |
| SPA0999 | 4 | 34 | -10.332829 | hypothetical protein | |
| SPA1000 | 5 | 33 | -8.955783 | hypothetical protein | |
| SPA1001 | 4 | 26 | -6.484830 | hypothetical protein | |
| SPA1002 | 6 | 23 | -4.366771 | phage integrase protein | |
| SPA1003 | 6 | 26 | -5.142185 | hypothetical protein | |
| SPA1004 | 6 | 25 | -5.750174 | hypothetical protein | |
| SPA1005 | 6 | 30 | -6.888108 | hypothetical protein | |
| SPA1006 | 5 | 30 | -7.712349 | hydrolase | |
| SPA1007 | 7 | 44 | -10.869786 | hypothetical protein | |
| SPA1008 | 5 | 42 | -10.227595 | hypothetical protein | |
| SPA1009 | 5 | 43 | -10.442502 | hypothetical protein | |
| SPA1010 | 4 | 41 | -8.918023 | hypothetical protein | |
| SPA1011 | 4 | 34 | -9.093882 | hypothetical protein | |
| SPA1013 | 5 | 36 | -9.902032 | hypothetical protein | |
| SPA1014 | 4 | 36 | -9.635305 | hypothetical protein | |
| SPA1015 | 2 | 33 | -7.850323 | acetyltransferase | |
| SPA1016 | 1 | 32 | -7.132080 | hypothetical protein | |
| SPA1017 | 0 | 32 | -7.529134 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA1005 | ACRIFLAVINRP | 35 | 4e-04 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA1008 | PilS_PF08805 | 29 | 0.013 | PilS N terminal | |
>PilS_PF08805#PilS N terminal | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA1015 | SACTRNSFRASE | 28 | 0.008 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| 20 | SPA1142 | SPA1153 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SPA1142 | -1 | 15 | -3.200916 | intracellular septation protein | |
| SPA1143 | -1 | 20 | -3.851863 | hypothetical protein | |
| SPA1144 | -1 | 23 | -4.212643 | hypothetical protein | |
| SPA1145 | 0 | 20 | -2.438909 | outer membrane protein | |
| SPA1146 | 2 | 18 | -1.153336 | hypothetical protein | |
| SPA1147 | 2 | 17 | -0.419999 | hypothetical protein | |
| SPA1148 | 1 | 15 | 1.750062 | hypothetical protein | |
| SPA1149 | -1 | 14 | 3.337026 | hypothetical protein | |
| SPA1150 | -1 | 13 | 3.413644 | tryptophan synthase subunit alpha | |
| SPA1151 | -1 | 12 | 2.964629 | tryptophan synthase subunit beta | |
| SPA1152 | -2 | 10 | 2.951873 | indole-3-glycerol phosphate synthase | |
| SPA1153 | -2 | 10 | 3.041514 | anthranilate synthase component II; anthranilate |
| 21 | SPA1179 | SPA1194 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SPA1179 | -1 | 20 | -3.298447 | hypothetical protein | |
| SPA1180 | 0 | 21 | -2.998168 | peptide transport system ATP-binding protein | |
| SPA1181 | 1 | 28 | -4.796025 | peptide transport system ATP-binding protein | |
| SPA1182 | 4 | 35 | -6.562720 | peptide transport system permease SapC | |
| SPA1183 | 4 | 32 | -7.803816 | integrase | |
| SPA1186 | 1 | 23 | -4.668562 | hypothetical protein | |
| SPA1187 | 0 | 17 | -1.734052 | hypothetical protein | |
| SPA1188 | 0 | 15 | -1.830376 | hypothetical periplasmic protein | |
| SPA1190 | 1 | 14 | -0.564887 | hypothetical protein | |
| SPA1191 | 1 | 14 | -0.136328 | peptide transport system permease SapB | |
| SPA1192 | 3 | 13 | 0.195038 | peptide transport periplasmic protein SapA | |
| SPA1193 | 3 | 16 | -1.141449 | psp operon transcriptional activator PspF | |
| SPA1194 | 2 | 18 | -0.788707 | phage shock protein A |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA1181 | HTHFIS | 31 | 0.007 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA1193 | HTHFIS | 341 | e-117 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA1194 | RTXTOXIND | 29 | 0.019 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| 22 | SPA1207 | SPA1232 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SPA1207 | -1 | 19 | -3.314505 | transcriptional regulator | |
| SPA1208 | 0 | 24 | -4.749328 | oxidoreductase | |
| SPA1209 | 3 | 30 | -6.164827 | oxidoreductase | |
| SPA1210 | 4 | 35 | -8.526066 | transcriptional regulator | |
| SPA1211 | 5 | 38 | -10.657549 | lipoprotein | |
| SPA1213 | 3 | 35 | -8.982905 | transcriptional regulator | |
| SPA1214 | 2 | 31 | -6.612920 | lipoprotein | |
| SPA1216 | 0 | 26 | -7.303658 | hypothetical protein | |
| SPA1217 | -2 | 20 | -5.694073 | thiol peroxidase | |
| SPA1218 | -1 | 17 | -4.061225 | hypothetical protein | |
| SPA1219 | -1 | 14 | -3.431911 | hypothetical protein | |
| SPA1220 | 0 | 13 | -3.326314 | DNA-binding protein | |
| SPA1221 | -1 | 13 | -3.240812 | hypothetical protein | |
| SPA1222 | 0 | 14 | -1.319139 | hypothetical protein | |
| SPA1223 | -1 | 12 | -0.148802 | hypothetical protein | |
| SPA1224 | -1 | 11 | -0.528263 | fumarate and nitrate reduction regulatory | |
| SPA1225 | 0 | 23 | -4.031067 | O6-methylguanine-DNA-alkyltransferase | |
| SPA1226 | 0 | 23 | -4.954507 | hypothetical protein | |
| SPA1228 | 0 | 24 | -5.353655 | membrane transport protein | |
| SPA1230 | -2 | 15 | -2.829418 | ATP-dependent RNA helicase, stimulated by 23S | |
| SPA1231 | -1 | 17 | -3.653165 | hypothetical protein | |
| SPA1232 | -2 | 17 | -3.549062 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA1209 | DHBDHDRGNASE | 87 | 1e-22 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA1210 | HTHTETR | 45 | 3e-08 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA1211 | adhesinb | 27 | 0.006 | Adhesin B signature. | |
>adhesinb#Adhesin B signature. | |||||
| 23 | SPA1301 | SPA1325 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SPA1301 | -1 | 15 | -3.643051 | alcohol dehydrogenase | |
| SPA1302 | 0 | 18 | -5.058280 | NAD-linked malic enzyme; malate oxidoreductase | |
| SPA1303 | 2 | 25 | -6.405638 | 30S ribosomal protein S22 | |
| SPA1304 | 1 | 20 | -3.619910 | hypothetical protein | |
| SPA1305 | -1 | 16 | -1.858042 | osmotically inducible protein C | |
| SPA1306 | -1 | 14 | -1.736161 | hemolysin HlyE | |
| SPA1308 | -1 | 14 | -0.417238 | hypothetical protein | |
| SPA1309 | -1 | 16 | -1.459092 | hypothetical protein | |
| SPA1310 | -1 | 17 | -1.745124 | hydrolase | |
| SPA1311 | 0 | 18 | -2.286195 | hydrolase | |
| SPA1312 | 1 | 18 | -3.123102 | glycogen debranching protein | |
| SPA1313 | 0 | 19 | -3.638433 | aminotransferase | |
| SPA1315 | 0 | 18 | -3.687444 | hypothetical protein | |
| SPA1316 | 0 | 14 | -1.526482 | regulatory protein | |
| SPA1317 | 0 | 13 | -1.626901 | uptake hydrogenase small subunit | |
| SPA1318 | -1 | 14 | -1.377693 | hydrogenase-1 large subunit | |
| SPA1319 | 0 | 18 | -1.636629 | Ni/Fe-hydrogenase 1 b-type cytochrome subunit | |
| SPA1320 | 0 | 21 | -2.877249 | hydrogenase 1 maturation protease | |
| SPA1322 | 0 | 23 | -3.442650 | hydrogenase-1 operon protein HyaE2 | |
| SPA1323 | 0 | 24 | -4.464058 | hydrogenase-1 operon protein HyaF2 | |
| SPA1324 | 0 | 25 | -4.362467 | ATP/GTP-binding protein | |
| SPA1325 | 0 | 20 | -4.154991 | hydrogenase |
| 24 | SPA1425 | SPA1472 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SPA1425 | 0 | 19 | -4.860052 | integral membrane transport protein | |
| SPA1426 | 0 | 22 | -6.559204 | cyclopropane-fatty-acyl-phospholipid synthase | |
| SPA1427 | 1 | 27 | -7.576303 | riboflavin synthase subunit alpha | |
| SPA1428 | 3 | 34 | -8.218265 | hypothetical protein | |
| SPA1431 | 5 | 45 | -11.122350 | **type III secretion protein | |
| SPA1432 | 5 | 44 | -10.195947 | type III secretion protein | |
| SPA1433 | 3 | 41 | -6.802426 | type III secretion protein | |
| SPA1434 | 2 | 35 | -6.615353 | type III secretion protein | |
| SPA1435 | 2 | 35 | -6.460463 | type III secretion protein | |
| SPA1436 | 1 | 34 | -6.520073 | type III secretion protein | |
| SPA1437 | 0 | 34 | -6.858910 | type III secretion protein | |
| SPA1438 | 0 | 36 | -6.682319 | type III secretion ATP synthase | |
| SPA1439 | 1 | 37 | -8.397770 | Secretion system apparatus | |
| SPA1440 | 3 | 42 | -9.401519 | pathogenicity island protein | |
| SPA1441 | 2 | 43 | -9.227740 | secretion system protein | |
| SPA1442 | 4 | 41 | -10.242857 | pathogenicity island protein | |
| SPA1443 | 6 | 43 | -8.806166 | pathogenicity island protein | |
| SPA1444 | 6 | 44 | -7.957803 | pathogenicity island lipoprotein | |
| SPA1445 | 8 | 42 | -6.580193 | pathogenicity island protein | |
| SPA1446 | 7 | 43 | -6.710277 | pathogenicity island protein | |
| SPA1447 | 6 | 41 | -6.004158 | pathogenicity island protein | |
| SPA1448 | 4 | 38 | -6.205200 | pathogenicity island effector protein | |
| SPA1449 | 3 | 36 | -6.063866 | pathogenicity island effector protein | |
| SPA1450 | 3 | 32 | -7.004349 | pathogenicity island protein | |
| SPA1451 | 3 | 35 | -7.671917 | pathogenicity island effector protein | |
| SPA1452 | 4 | 34 | -7.685469 | pathogenicity island effector protein | |
| SPA1453 | 4 | 37 | -8.918023 | pathogenicity island effector protein | |
| SPA1454 | 5 | 40 | -9.985365 | Type III secretion system chaperone protein | |
| SPA1455 | 7 | 43 | -10.940354 | pathogenicity island effector effector protein | |
| SPA1456 | 4 | 42 | -10.853540 | pathogenicity island protein | |
| SPA1457 | 4 | 42 | -11.025728 | secretion system protein | |
| SPA1458 | 4 | 39 | -9.834355 | pathogenicity island protein | |
| SPA1459 | 2 | 33 | -8.092680 | outer membrane secretory protein | |
| SPA1460 | 2 | 31 | -7.060329 | pathogenicity island secreted effector protein | |
| SPA1461 | 0 | 28 | -5.767530 | two-component sensor kinase | |
| SPA1462 | 0 | 17 | 0.190781 | two-component response regulator | |
| SPA1463 | 0 | 14 | 2.180498 | transcriptional regulator | |
| SPA1464 | -1 | 12 | 3.093163 | pathogenicity island protein | |
| SPA1465 | 0 | 13 | 1.683158 | hypothetical protein | |
| SPA1466 | 0 | 14 | 1.328299 | two-component response regulator | |
| SPA1467 | -1 | 13 | 0.657407 | hypothetical protein | |
| SPA1469 | -1 | 13 | -0.169979 | tetrathionate reductase subunit C (membrane | |
| SPA1470 | -2 | 14 | -0.504955 | tetrathionate reductase subunit A | |
| SPA1472 | -2 | 19 | -3.678085 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA1425 | TCRTETB | 76 | 3e-17 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA1431 | TYPE3IMSPROT | 386 | e-136 | Type III secretion system inner membrane S protein ... | |
>TYPE3IMSPROT#Type III secretion system inner membrane S protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA1432 | TYPE3IMRPROT | 164 | 4e-52 | Type III secretion system inner membrane R protein ... | |
>TYPE3IMRPROT#Type III secretion system inner membrane R protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA1433 | TYPE3IMQPROT | 72 | 9e-21 | Type III secretion system inner membrane Q protein ... | |
>TYPE3IMQPROT#Type III secretion system inner membrane Q protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA1434 | TYPE3IMPPROT | 231 | 9e-80 | Type III secretion system inner membrane P protein ... | |
>TYPE3IMPPROT#Type III secretion system inner membrane P protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA1435 | TYPE3OMOPROT | 54 | 2e-10 | Type III secretion system outer membrane O protein ... | |
>TYPE3OMOPROT#Type III secretion system outer membrane O protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA1444 | FLGMRINGFLIF | 52 | 5e-10 | Flagellar M-ring protein signature. | |
>FLGMRINGFLIF#Flagellar M-ring protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA1450 | SYCDCHAPRONE | 77 | 5e-21 | Gram-negative bacterial type III secretion SycD cha... | |
>SYCDCHAPRONE#Gram-negative bacterial type III secretion SycD | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA1452 | PF05844 | 29 | 0.010 | YopD protein | |
>PF05844#YopD protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA1454 | SYCDCHAPRONE | 90 | 2e-25 | Gram-negative bacterial type III secretion SycD cha... | |
>SYCDCHAPRONE#Gram-negative bacterial type III secretion SycD | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA1455 | LIPPROTEIN48 | 27 | 0.047 | Mycoplasma P48 major surface lipoprotein signature. | |
>LIPPROTEIN48#Mycoplasma P48 major surface lipoprotein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA1459 | TYPE3OMGPROT | 581 | 0.0 | Type III secretion system outer membrane G protein ... | |
>TYPE3OMGPROT#Type III secretion system outer membrane G protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA1461 | HTHFIS | 68 | 1e-13 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA1462 | HTHFIS | 66 | 7e-15 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA1466 | HTHFIS | 84 | 2e-21 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 25 | SPA1499 | SPA1514 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SPA1499 | 2 | 20 | -0.624562 | hypothetical protein | |
| SPA1500 | -3 | 12 | 0.555855 | lipoprotein | |
| SPA1501 | -3 | 14 | 0.928045 | vitamin B12 ABC transport ATP-binding protein | |
| SPA1502 | -3 | 16 | 0.323258 | glutathione peroxidase/vitamin B12 transport | |
| SPA1503 | -2 | 18 | 0.573785 | vitamin B12 transport system permease | |
| SPA1504 | 1 | 21 | -1.286995 | integration host factor subunit alpha | |
| SPA1505 | 1 | 19 | -1.635635 | phenylalanyl-tRNA synthetase subunit beta | |
| SPA1506 | 0 | 25 | -6.734005 | phenylalanyl-tRNA synthetase subunit alpha | |
| SPA1507 | 0 | 30 | -8.746047 | 50S ribosomal protein L20 | |
| SPA1508 | 1 | 26 | -8.023484 | 50S ribosomal subunit protein L35 | |
| SPA1510 | 1 | 26 | -8.970588 | translation initiation factor IF-3 | |
| SPA1511 | 1 | 26 | -8.753278 | threonyl-tRNA synthetase | |
| SPA1512 | 4 | 34 | -10.315647 | O-antigen polymerase | |
| SPA1513 | 1 | 24 | -4.162067 | hypothetical protein | |
| SPA1514 | 0 | 22 | -3.582731 | DNA/RNA non-specific endonuclease |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA1501 | PF05272 | 30 | 0.014 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA1504 | DNABINDINGHU | 119 | 6e-39 | Prokaryotic integration host factor signature. | |
>DNABINDINGHU#Prokaryotic integration host factor signature. | |||||
| 26 | SPA1527 | SPA1544 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SPA1527 | -1 | 15 | -4.315708 | hypothetical protein | |
| SPA1528 | 0 | 14 | -5.048845 | phospho-beta-glucosidase B | |
| SPA1529 | 0 | 14 | -4.006350 | cel operon repressor | |
| SPA1530 | 1 | 15 | -1.352663 | phosphoenolpyruvate dependent phosphotransferase | |
| SPA1531 | 2 | 15 | -1.347294 | PTS system cellobiose-specific transporter | |
| SPA1532 | 2 | 15 | 0.608275 | PTS system cellobiose-specific transporter | |
| SPA1533 | 1 | 16 | 1.780802 | osmotically inducible lipoprotein E precursor | |
| SPA1534 | 0 | 17 | 3.000258 | NH3-dependent NAD synthetase | |
| SPA1535 | 0 | 17 | 3.312271 | hypothetical protein | |
| SPA1536 | 0 | 16 | 3.380652 | hypothetical protein | |
| SPA1537 | 0 | 16 | 3.320232 | succinylglutamate desuccinylase | |
| SPA1538 | 0 | 15 | 3.033158 | succinylarginine dihydrolase | |
| SPA1539 | -1 | 15 | 2.905421 | succinylglutamic semialdehyde dehydrogenase | |
| SPA1540 | 0 | 13 | 2.395465 | arginine succinyltransferase | |
| SPA1541 | 0 | 11 | 2.558476 | succinylornithine transaminase | |
| SPA1542 | 0 | 11 | 2.701253 | exodeoxyribonuclease III | |
| SPA1543 | 0 | 12 | 3.291662 | MutT-family protein | |
| SPA1544 | 0 | 13 | 3.037932 | hypothetical protein |
| 27 | SPA1555 | SPA1611 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SPA1555 | -1 | 12 | -3.022331 | aldose 1-epimerase | |
| SPA1556 | -2 | 12 | -3.010642 | oxidoreductase | |
| SPA1557 | -2 | 12 | -4.024657 | arylsulfatase regulator | |
| SPA1558 | 0 | 13 | -3.394998 | outer membrane protein | |
| SPA1560 | -2 | 16 | -2.707820 | hypothetical protein | |
| SPA1561 | -1 | 17 | -0.959570 | methyl-accepting chemotaxis protein | |
| SPA1562 | 0 | 17 | 2.075821 | hypothetical protein | |
| SPA1563 | 0 | 21 | 2.349583 | inner membrane protein | |
| SPA1564 | 1 | 22 | 2.612376 | hypothetical protein | |
| SPA1565 | 2 | 21 | 1.747371 | transcriptional regulator | |
| SPA1566 | 2 | 22 | 0.429002 | hypothetical protein | |
| SPA1567 | 1 | 30 | -3.186499 | bacteriophage protein | |
| SPA1568 | 3 | 30 | -3.526941 | hypothetical protein | |
| SPA1569 | 2 | 29 | -4.455800 | hypothetical protein | |
| SPA1570 | 2 | 26 | -5.705526 | hypothetical protein | |
| SPA1571 | 0 | 26 | -5.609438 | hypothetical protein | |
| SPA1573 | 1 | 24 | -5.833800 | hypothetical protein | |
| SPA1574 | 0 | 25 | -7.810033 | hypothetical protein | |
| SPA1575 | 0 | 27 | -7.859255 | hypothetical protein | |
| SPA1576 | 0 | 33 | -10.302790 | membrane transport protein | |
| SPA1577 | 1 | 31 | -8.279212 | chorismate mutase | |
| SPA1578 | 1 | 30 | -8.563197 | hypothetical protein | |
| SPA1579 | 2 | 28 | -7.279784 | hypothetical protein | |
| SPA1580 | 0 | 24 | -6.170938 | transcriptional regulator | |
| SPA1581 | -1 | 23 | -4.512736 | regulatory protein | |
| SPA1582 | 0 | 19 | -1.614215 | aminoglycoside-resistance protein | |
| SPA1583 | 1 | 19 | -1.183515 | hypothetical protein | |
| SPA1585 | 1 | 17 | -0.033443 | *hypothetical protein | |
| SPA1586 | 1 | 15 | 0.058276 | hypothetical protein | |
| SPA1587 | 2 | 17 | 0.399716 | ABC transporter ATP-binding protein | |
| SPA1588 | 3 | 17 | -0.680021 | ABC transporter ATP-binding protein | |
| SPA1589 | 2 | 18 | -1.519105 | inner membrane transport protein | |
| SPA1590 | 1 | 19 | -2.600935 | inner membrane transport protein | |
| SPA1591 | 1 | 21 | -4.272429 | substrate-binding transport protein | |
| SPA1592 | 4 | 31 | -6.995426 | lipoprotein | |
| SPA1593 | 3 | 28 | -7.489451 | cytochrome | |
| SPA1594 | 4 | 32 | -8.267039 | hypothetical protein | |
| SPA1596 | 7 | 38 | -11.113631 | hypothetical protein | |
| SPA1599 | 6 | 39 | -10.574785 | *outer membrane invasion protein | |
| SPA1600 | 6 | 39 | -10.048703 | hypothetical protein | |
| SPA1601 | 6 | 45 | -9.234192 | hypothetical protein | |
| SPA1602 | 7 | 45 | -9.192710 | outer membrane virulence protein | |
| SPA1603 | 6 | 43 | -8.720930 | cold shock protein | |
| SPA1604 | 7 | 45 | -10.159487 | lipoprotein | |
| SPA1605 | 7 | 50 | -11.069596 | virulence protein | |
| SPA1606 | 7 | 52 | -12.302202 | toxin-like protein | |
| SPA1607 | 3 | 37 | -10.186791 | hypothetical protein | |
| SPA1608 | 1 | 33 | -8.417459 | hypothetical protein | |
| SPA1609 | 0 | 29 | -8.024704 | pertussis-like toxin subunit | |
| SPA1610 | -2 | 23 | -6.163785 | pertussis-like toxin subunit | |
| SPA1611 | -1 | 13 | -3.797602 | bacteriophage protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA1564 | PRTACTNFAMLY | 28 | 0.012 | Pertactin virulence factor family signature. | |
>PRTACTNFAMLY#Pertactin virulence factor family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA1570 | HTHTETR | 28 | 0.002 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA1599 | ENTEROVIROMP | 194 | 4e-66 | Enterobacterial virulence outer membrane protein si... | |
>ENTEROVIROMP#Enterobacterial virulence outer membrane protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA1606 | cdtoxinb | 298 | e-104 | Cytolethal distending toxin B signature. | |
>cdtoxinb#Cytolethal distending toxin B signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA1609 | BORPETOXINA | 81 | 2e-20 | Bordetella pertussis toxin A subunit signature. | |
>BORPETOXINA#Bordetella pertussis toxin A subunit signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA1610 | BORPETOXINB | 35 | 4e-05 | Bordetella pertussis toxin B subunit signature. | |
>BORPETOXINB#Bordetella pertussis toxin B subunit signature. | |||||
| 28 | SPA1660 | SPA1673 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SPA1660 | 4 | 17 | 2.556044 | 50S ribosomal protein L32 | |
| SPA1661 | 3 | 16 | 2.306362 | hypothetical protein | |
| SPA1663 | 3 | 15 | 1.694008 | hypothetical protein | |
| SPA1664 | 2 | 14 | 1.838034 | ribosomal large subunit pseudouridine synthase | |
| SPA1665 | 1 | 14 | 2.303953 | hypothetical protein | |
| SPA1666 | 1 | 15 | 2.473201 | ribonuclease E | |
| SPA1667 | -1 | 14 | 1.395952 | flagellar hook-associated protein 3 | |
| SPA1668 | -1 | 14 | 2.344374 | flagellar hook-associated protein 1 | |
| SPA1669 | -1 | 16 | 3.502418 | flagellar protein FlgJ | |
| SPA1670 | 1 | 14 | 3.279424 | flagellar P-ring protein | |
| SPA1671 | 2 | 15 | 2.895768 | flagellar L-ring protein | |
| SPA1672 | 2 | 15 | 2.840717 | flagellar basal-body rod protein FlgG (distal | |
| SPA1673 | 2 | 12 | 3.012563 | flagellar basal-body rod protein FlgF |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA1666 | IGASERPTASE | 56 | 9e-10 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA1667 | FLAGELLIN | 41 | 4e-06 | Flagellin signature. | |
>FLAGELLIN#Flagellin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA1668 | FLGHOOKAP1 | 664 | 0.0 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA1669 | FLGFLGJ | 499 | 0.0 | Flagellar protein FlgJ signature. | |
>FLGFLGJ#Flagellar protein FlgJ signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA1670 | FLGPRINGFLGI | 429 | e-153 | Flagellar P-ring protein signature. | |
>FLGPRINGFLGI#Flagellar P-ring protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA1671 | FLGLRINGFLGH | 353 | e-127 | Flagellar L-ring protein signature. | |
>FLGLRINGFLGH#Flagellar L-ring protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA1672 | FLGHOOKAP1 | 44 | 4e-07 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
| 29 | SPA1704 | SPA1727 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SPA1704 | 0 | 31 | -6.288676 | hypothetical protein | |
| SPA1705 | 0 | 32 | -8.406579 | hypothetical protein | |
| SPA1706 | -1 | 28 | -7.625288 | hypothetical protein | |
| SPA1707 | 0 | 24 | -6.431059 | major curlin subunit precursor | |
| SPA1708 | -1 | 24 | -5.977132 | curlin monomer nucleation protein | |
| SPA1709 | -2 | 19 | -4.590537 | regulatory protein | |
| SPA1710 | 0 | 15 | -1.697053 | assembly/transport component in curli | |
| SPA1712 | -1 | 16 | -2.160595 | assembly/transport component in curli | |
| SPA1713 | 1 | 19 | -3.304192 | hypothetical protein | |
| SPA1714 | 0 | 23 | -5.434030 | hypothetical protein | |
| SPA1715 | 1 | 26 | -5.441201 | hypothetical protein | |
| SPA1716 | 2 | 28 | -6.566664 | 2-hydroxyacid dehydrogenase | |
| SPA1718 | 2 | 31 | -7.516915 | *oxidoreductase | |
| SPA1719 | 1 | 30 | -7.038813 | transporter | |
| SPA1720 | 1 | 21 | -4.956386 | hypothetical protein | |
| SPA1722 | -3 | 9 | 0.254237 | hypothetical protein | |
| SPA1723 | -3 | 9 | 0.526788 | sodium/glucose cotransporter | |
| SPA1724 | -2 | 10 | 2.144568 | transcriptional regulator | |
| SPA1725 | 0 | 11 | 2.799552 | PhoH protein (phosphate starvation-inducible | |
| SPA1726 | -1 | 10 | 3.513221 | sodium/proline symporter (proline permease) | |
| SPA1727 | 0 | 12 | 3.973537 | proline dehydrogenase (proline oxidase) |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA1719 | TCRTETA | 52 | 3e-09 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| 30 | SPA1743 | SPA1762 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SPA1743 | 0 | 23 | 3.538644 | 4-hydroxyphenylacetate permease | |
| SPA1744 | 0 | 24 | 4.226724 | 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase | |
| SPA1745 | -1 | 24 | 2.738808 | 2-oxo-hepta-3-ene-1,7-dioic acid hydratase | |
| SPA1746 | -2 | 21 | 2.119194 | 5-carboxymethyl-2-hydroxymuconate | |
| SPA1747 | -2 | 19 | 1.805802 | 3,4-dihydroxyphenylacetate 2,3-dioxygenase | |
| SPA1748 | -1 | 14 | 1.439441 | 4-hydroxyphenylacetate catabolism | |
| SPA1750 | -2 | 15 | -1.063251 | homoprotocatechuate degradative operon | |
| SPA1751 | -2 | 16 | -1.277710 | 4-hydroxyphenylacetate 3-monooxygenase | |
| SPA1752 | -2 | 25 | -2.316957 | 4-hydroxyphenylacetate 3-monooxygenase coupling | |
| SPA1753 | 1 | 26 | -4.548908 | hypothetical protein | |
| SPA1754 | 1 | 25 | -4.992403 | response regulator | |
| SPA1755 | 3 | 28 | -6.640745 | histidine kinase | |
| SPA1757 | 3 | 38 | -10.277209 | hypothetical protein | |
| SPA1758 | 3 | 38 | -10.119887 | hypothetical protein | |
| SPA1759 | 3 | 33 | -8.815818 | cell invasion protein | |
| SPA1760 | 3 | 32 | -9.156860 | cell invasion protein | |
| SPA1761 | 3 | 29 | -8.092626 | inner membrane protein | |
| SPA1762 | 2 | 23 | -5.232791 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA1754 | HTHFIS | 83 | 1e-20 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA1755 | PF06580 | 34 | 0.001 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA1759 | TYPE3OMBPROT | 655 | 0.0 | Type III secretion system outer membrane B protein ... | |
>TYPE3OMBPROT#Type III secretion system outer membrane B protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA1760 | PF07824 | 165 | 1e-56 | Type III secretion chaperone | |
>PF07824#Type III secretion chaperone | |||||
| 31 | SPA1822 | SPA1838 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SPA1822 | 2 | 24 | -2.544015 | hypothetical protein | |
| SPA1823 | 1 | 22 | -3.127536 | hypothetical protein | |
| SPA1824 | 3 | 22 | -3.530669 | formate transporter | |
| SPA1825 | 2 | 22 | -3.337824 | formate acetyltransferase 1 | |
| SPA1827 | 4 | 15 | -2.737197 | hypothetical protein | |
| SPA1828 | 4 | 15 | -1.546683 | pyruvate formate-lyase 1 activating enzyme | |
| SPA1829 | 2 | 11 | -0.488379 | transport protein | |
| SPA1830 | -1 | 13 | 0.879816 | transport protein | |
| SPA1831 | -2 | 14 | 1.922086 | hypothetical protein | |
| SPA1832 | -3 | 13 | 1.660652 | dimethyl sulfoxide reductase subunit C | |
| SPA1833 | -2 | 12 | 2.769790 | anaerobic dimethyl sulfoxide reductase subunit | |
| SPA1834 | -1 | 11 | 2.371411 | anaerobic dimethyl sulfoxide reductase subunit | |
| SPA1835 | -1 | 11 | 2.855591 | seryl-tRNA synthetase | |
| SPA1836 | -2 | 10 | 3.293342 | hypothetical protein | |
| SPA1837 | -2 | 11 | 3.333403 | outer membrane lipoprotein carrier protein | |
| SPA1838 | -2 | 11 | 3.706676 | cell division protein, required for cell |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA1830 | TCRTETB | 32 | 0.004 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA1832 | BCTERIALGSPC | 28 | 0.035 | Bacterial general secretion pathway protein C signa... | |
>BCTERIALGSPC#Bacterial general secretion pathway protein C | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA1838 | IGASERPTASE | 58 | 3e-10 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| 32 | SPA1861 | SPA1878 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SPA1861 | -2 | 17 | 3.300292 | hypothetical protein | |
| SPA1862 | -2 | 18 | 3.716214 | prismane-like protein | |
| SPA1863 | 1 | 15 | 3.819338 | NADH oxidoreductase Hcr | |
| SPA1864 | 2 | 15 | 3.927223 | pyruvate dehydrogenase | |
| SPA1865 | 3 | 16 | 3.911503 | L-allo-threonine aldolase | |
| SPA1866 | 1 | 15 | 2.887533 | hypothetical protein | |
| SPA1867 | 0 | 14 | 1.196144 | oxidoreductase | |
| SPA1868 | -1 | 14 | 1.197159 | N-acetylmuramoyl-L-alanine amidase | |
| SPA1869 | 0 | 13 | 0.285485 | hypothetical protein | |
| SPA1870 | -1 | 13 | -0.688474 | lipoprotein | |
| SPA1871 | -3 | 13 | -1.418516 | arginine transport ATP-binding protein ArtP | |
| SPA1872 | -2 | 12 | -2.600501 | arginine/ornithine ABC transporter | |
| SPA1873 | 0 | 14 | -3.922133 | arginine transport system permease protein ArtQ | |
| SPA1874 | 1 | 17 | -5.482534 | arginine transport system permease protein ArtM | |
| SPA1875 | 2 | 16 | -4.214468 | arginine-binding periplasmic protein | |
| SPA1876 | 1 | 18 | -4.017049 | sulfatase | |
| SPA1877 | 2 | 19 | -3.119580 | PTS system transporter subunit IIB | |
| SPA1878 | 2 | 16 | -1.970215 | transport protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA1866 | NUCEPIMERASE | 55 | 2e-10 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA1867 | NUCEPIMERASE | 66 | 2e-14 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA1871 | PF05272 | 30 | 0.006 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA1872 | FLGFLIH | 30 | 0.006 | Flagellar assembly protein FliH signature. | |
>FLGFLIH#Flagellar assembly protein FliH signature. | |||||
| 33 | SPA1951 | SPA1965 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SPA1951 | -1 | 16 | 3.297190 | hypothetical protein | |
| SPA1953 | -2 | 16 | 3.369290 | hypothetical protein | |
| SPA1954 | -2 | 16 | 4.187145 | excision nuclease ABC subunit B | |
| SPA1955 | -1 | 15 | 5.169609 | dethiobiotin synthetase | |
| SPA1956 | -1 | 15 | 5.519481 | biotin synthesis protein BioC | |
| SPA1957 | -1 | 16 | 5.208272 | 8-amino-7-oxononanoate synthase | |
| SPA1958 | -1 | 15 | 5.233498 | biotin synthetase | |
| SPA1959 | 0 | 15 | 5.650478 | adenosylmethionine-8-amino-7-oxononanoate | |
| SPA1960 | -1 | 14 | 5.367692 | hypothetical protein | |
| SPA1961 | -1 | 14 | 4.952190 | histidine ammonia-lyase | |
| SPA1963 | 0 | 14 | 3.890078 | histidine utilization repressor | |
| SPA1964 | -1 | 13 | 3.674219 | formiminoglutamase | |
| SPA1965 | 0 | 14 | 3.274555 | imidazolonepropionase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA1965 | PRTACTNFAMLY | 31 | 0.013 | Pertactin virulence factor family signature. | |
>PRTACTNFAMLY#Pertactin virulence factor family signature. | |||||
| 34 | SPA2006 | SPA2036 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SPA2006 | 2 | 23 | 2.179269 | dihydrolipoamide succinyltransferase component | |
| SPA2007 | 1 | 21 | 1.523552 | 2-oxoglutarate dehydrogenase E1 component | |
| SPA2008 | 2 | 22 | 0.244263 | succinate dehydrogenase iron-sulfur protein | |
| SPA2009 | 1 | 20 | 1.261697 | succinate dehydrogenase flavoprotein subunit | |
| SPA2010 | -1 | 16 | -0.891077 | succinate dehydrogenase hydrophobic membrane | |
| SPA2011 | -1 | 16 | -0.783560 | succinate dehydrogenase cytochrome b-556 | |
| SPA2012 | -1 | 21 | -6.505219 | hypothetical protein | |
| SPA2013 | -1 | 23 | -8.399688 | citrate synthase | |
| SPA2014 | 3 | 39 | -13.377758 | hypothetical protein | |
| SPA2015 | 5 | 46 | -16.225136 | endonuclease VIII, DNA N-glycosylase with an AP | |
| SPA2016 | 7 | 51 | -18.348718 | hypothetical protein | |
| SPA2017 | 6 | 52 | -17.999346 | glycosyl transferase family protein | |
| SPA2018 | 4 | 48 | -15.623364 | hypothetical protein | |
| SPA2019 | 4 | 45 | -13.647199 | cell wall biogenesis glycosyltransferase | |
| SPA2020 | 3 | 40 | -10.665334 | polysaccharide export ABC transporter | |
| SPA2021 | -1 | 33 | -7.417725 | galactosyltransferase | |
| SPA2022 | -1 | 23 | -2.114508 | UDP-galactopyranose mutase | |
| SPA2023 | -1 | 19 | 3.317480 | hypothetical protein | |
| SPA2025 | -2 | 16 | 3.060038 | DNA recombinase | |
| SPA2026 | -1 | 15 | 3.331960 | hypothetical protein | |
| SPA2027 | -2 | 13 | 3.744514 | hypothetical protein | |
| SPA2028 | -1 | 14 | 3.221555 | hypothetical protein | |
| SPA2029 | 0 | 15 | 2.412480 | hypothetical protein | |
| SPA2030 | 0 | 14 | 2.280303 | hypothetical protein | |
| SPA2031 | -1 | 15 | 3.201898 | PTR2-family transport protein | |
| SPA2032 | 0 | 16 | 3.912924 | deoxyribodipyrimidine photolyase | |
| SPA2033 | 0 | 16 | 4.555719 | hypothetical protein | |
| SPA2034 | 0 | 16 | 4.621793 | hypothetical protein | |
| SPA2035 | -1 | 14 | 4.001639 | potassium-transporting ATPase subunit A | |
| SPA2036 | -1 | 15 | 3.597298 | P-type ATPase, high-affinity potassium transport |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2008 | TCRTETOQM | 31 | 0.004 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2020 | PF05272 | 31 | 0.006 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2027 | V8PROTEASE | 32 | 0.002 | V8 serine protease family signature. | |
>V8PROTEASE#V8 serine protease family signature. | |||||
| 35 | SPA2108 | SPA2114 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SPA2108 | -1 | 22 | 3.598257 | transcriptional regulatory protein DpiA | |
| SPA2110 | -1 | 23 | 4.857655 | [citrate (pro-3S)-lyase] ligase | |
| SPA2111 | -2 | 24 | 4.795475 | citrate lyase acyl carrier protein | |
| SPA2112 | -2 | 21 | 4.488909 | citrate lyase subunit beta | |
| SPA2113 | -2 | 19 | 4.311200 | citrate lyase subunit alpha | |
| SPA2114 | -1 | 14 | 3.214714 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2108 | HTHFIS | 64 | 4e-14 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2110 | LPSBIOSNTHSS | 38 | 1e-05 | Lipopolysaccharide core biosynthesis protein signat... | |
>LPSBIOSNTHSS#Lipopolysaccharide core biosynthesis protein | |||||
| 36 | SPA2124 | SPA2146 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SPA2124 | -2 | 15 | -4.501072 | hypothetical protein | |
| SPA2125 | -1 | 14 | -3.770703 | alkyl hydroperoxide reductase F52A protein | |
| SPA2126 | -1 | 19 | -4.385607 | alkyl hydroperoxide reductase c22 protein | |
| SPA2127 | 0 | 17 | -2.841091 | thiol:disulfide interchange protein DsbG | |
| SPA2128 | 0 | 16 | -2.699643 | putative lysR-family transcriptional regulator | |
| SPA2129 | 0 | 10 | 1.053888 | hypothetical protein | |
| SPA2130 | -1 | 13 | 2.563061 | hypothetical protein | |
| SPA2131 | 0 | 14 | 3.503361 | aminotransferase | |
| SPA2132 | 0 | 16 | 3.988575 | oxidoreductase | |
| SPA2133 | 0 | 15 | 3.953376 | hypothetical protein | |
| SPA2134 | -1 | 14 | 4.327617 | carbon starvation protein A | |
| SPA2135 | -2 | 13 | 4.585184 | hypothetical protein | |
| SPA2136 | -2 | 13 | 4.682988 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |
| SPA2137 | -1 | 12 | 5.189781 | isochorismatase | |
| SPA2138 | 0 | 11 | 5.557922 | 2,3-dihydroxybenzoate-AMP ligase | |
| SPA2139 | 1 | 13 | 5.615635 | isochorismate synthase EntC | |
| SPA2140 | 1 | 13 | 3.813006 | ferrienterobactin-binding periplasmic protein | |
| SPA2141 | 2 | 15 | 4.584553 | membrane protein p43 | |
| SPA2142 | 2 | 16 | 4.329841 | ferric enterobactin transport protein FepD | |
| SPA2143 | 1 | 16 | 4.130556 | ferric enterobactin transport protein FepG | |
| SPA2144 | -1 | 13 | 3.090673 | ferric enterobactin transport ATP-binding | |
| SPA2145 | -1 | 12 | 3.046156 | ferric enterobactin (enterochelin) transporter | |
| SPA2146 | -1 | 12 | 3.654237 | enterobactin synthetase component F |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2125 | STREPTOPAIN | 31 | 0.011 | Streptopain (C10) cysteine protease family signature. | |
>STREPTOPAIN#Streptopain (C10) cysteine protease family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2127 | BCTLIPOCALIN | 28 | 0.018 | Bacterial lipocalin signature. | |
>BCTLIPOCALIN#Bacterial lipocalin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2128 | PF05043 | 29 | 0.033 | Transcriptional activator | |
>PF05043#Transcriptional activator | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2136 | DHBDHDRGNASE | 338 | e-120 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2137 | ISCHRISMTASE | 425 | e-154 | Isochorismatase signature. | |
>ISCHRISMTASE#Isochorismatase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2140 | FERRIBNDNGPP | 59 | 4e-12 | Ferrichrome-binding periplasmic protein signature. | |
>FERRIBNDNGPP#Ferrichrome-binding periplasmic protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2141 | TCRTETB | 29 | 0.039 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| 37 | SPA2165 | SPA2198 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SPA2165 | 0 | 29 | -7.614555 | inner membrane proton/cation antiporter | |
| SPA2166 | 2 | 33 | -9.544354 | copper-binding protein | |
| SPA2167 | 1 | 32 | -9.162340 | bactoprenol-linked glucose translocase | |
| SPA2168 | 2 | 33 | -10.111293 | bactoprenol glucosyltransferase | |
| SPA2170 | 0 | 28 | -7.795800 | transposase | |
| SPA2173 | 0 | 23 | -6.173235 | *fimbriae w protein | |
| SPA2174 | 2 | 15 | -1.958505 | hypothetical protein | |
| SPA2175 | 2 | 15 | -1.673987 | fimbriae Y protein | |
| SPA2176 | 3 | 16 | -0.795800 | transcriptional regulator) | |
| SPA2177 | 2 | 14 | 0.662849 | fimbria-like protein FimF precursor | |
| SPA2178 | 2 | 14 | 0.678662 | FimH protein | |
| SPA2179 | 1 | 13 | 1.201242 | outer membrane usher protein FimD | |
| SPA2180 | -1 | 14 | 0.855459 | fimbrial chaperone protein | |
| SPA2181 | -1 | 12 | 1.738580 | hypothetical protein | |
| SPA2182 | -1 | 14 | 1.136058 | type-1 fimbrial protein subunit A | |
| SPA2183 | 0 | 15 | 1.350503 | bifunctional methylenetetrahydrofolate | |
| SPA2184 | 0 | 18 | 2.107089 | hypothetical protein | |
| SPA2185 | 0 | 17 | 2.799021 | hypothetical protein | |
| SPA2186 | 0 | 15 | 3.119014 | cysteinyl-tRNA synthetase | |
| SPA2187 | 0 | 10 | 3.637533 | peptidyl-prolyl cis-trans isomerase B | |
| SPA2188 | 1 | 12 | 4.358331 | hypothetical protein | |
| SPA2189 | 1 | 11 | 3.146832 | phosphoribosylaminoimidazole carboxylase | |
| SPA2190 | 0 | 12 | 2.240572 | phosphoribosylaminoimidazole carboxylase ATPase | |
| SPA2191 | 0 | 13 | 0.862185 | carbamate kinase | |
| SPA2192 | 1 | 14 | 0.969118 | hypothetical protein | |
| SPA2193 | 2 | 14 | 0.133108 | hypothetical protein | |
| SPA2195 | 1 | 14 | -0.921316 | ureidoglycolate dehydrogenase | |
| SPA2196 | 1 | 13 | -1.611055 | allantoate amidohydrolase | |
| SPA2197 | 1 | 14 | -2.031216 | hypothetical protein | |
| SPA2198 | 2 | 17 | -2.528389 | glycerate kinase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2165 | ACRIFLAVINRP | 53 | 7e-12 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2170 | HTHFIS | 34 | 2e-05 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2176 | HTHFIS | 70 | 2e-16 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2179 | PF00577 | 826 | 0.0 | Outer membrane usher protein FimD | |
>PF00577#Outer membrane usher protein FimD | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2186 | RTXTOXIND | 30 | 0.018 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2191 | CARBMTKINASE | 359 | e-127 | Bacterial carbamate kinase signature. | |
>CARBMTKINASE#Bacterial carbamate kinase signature. | |||||
| 38 | SPA2270 | SPA2293 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SPA2270 | 4 | 24 | -0.587938 | peptidyl-prolyl cis-trans isomerase D | |
| SPA2271 | 4 | 26 | -0.634898 | DNA-binding protein HU-beta | |
| SPA2272 | 4 | 24 | -0.516182 | Lon protease | |
| SPA2273 | 3 | 20 | -0.111749 | ATP-dependent clp protease ATP-binding subunit | |
| SPA2274 | 1 | 18 | -0.497437 | ATP-dependent clp protease proteolytic subunit | |
| SPA2275 | 0 | 21 | -0.001947 | trigger factor | |
| SPA2276 | -1 | 20 | 0.199938 | BolA protein | |
| SPA2277 | 0 | 22 | 0.310419 | lipoprotein | |
| SPA2278 | 0 | 22 | 0.335025 | AmpG protein | |
| SPA2279 | 2 | 20 | -0.854049 | cytochrome o ubiquinol oxidase subunit II | |
| SPA2280 | -1 | 16 | -2.769703 | cytochrome o ubiquinol oxidase subunit I | |
| SPA2281 | 0 | 18 | -4.095542 | cytochrome o ubiquinol oxidase subunit III | |
| SPA2282 | 0 | 16 | -3.251108 | cytochrome o ubiquinol oxidase C subunit | |
| SPA2283 | 0 | 16 | -3.254708 | cytochrome o ubiquinol oxidase C subunit | |
| SPA2284 | -1 | 19 | -3.317736 | hypothetical protein | |
| SPA2285 | -2 | 16 | -2.715701 | hypothetical protein | |
| SPA2286 | -2 | 14 | 1.599365 | transposase | |
| SPA2287 | -1 | 14 | 1.890745 | hypothetical major facilitator family transport | |
| SPA2288 | -1 | 18 | 2.695205 | hypothetical protein | |
| SPA2289 | 0 | 18 | 3.286727 | ApbA protein | |
| SPA2290 | 0 | 18 | 4.349255 | 4-methyl-5(b-hydroxyethyl)-thiazole | |
| SPA2291 | 1 | 18 | 4.402281 | phosphonoacetaldehyde phosphonohydrolase | |
| SPA2292 | 2 | 19 | 3.991522 | 2-aminoethylphosphonate--pyruvate transaminase | |
| SPA2293 | 1 | 21 | 3.104569 | regulator of 2-aminoethylphosphonate uptake and |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2271 | DNABINDINGHU | 115 | 8e-38 | Prokaryotic integration host factor signature. | |
>DNABINDINGHU#Prokaryotic integration host factor signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2272 | GPOSANCHOR | 34 | 0.002 | Gram-positive coccus surface protein anchor signature. | |
>GPOSANCHOR#Gram-positive coccus surface protein anchor signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2278 | TCRTETB | 43 | 2e-06 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2287 | TCRTETA | 84 | 1e-19 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| 39 | SPA2364 | SPA2428 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SPA2364 | 0 | 13 | -3.594437 | hypothetical protein | |
| SPA2365 | 0 | 13 | -4.053456 | DNA restriction (DNA helicase | |
| SPA2366 | 0 | 15 | -4.822626 | type III restriction-modification system StyLTI | |
| SPA2367 | -2 | 20 | -4.820800 | metabolite transport protein | |
| SPA2369 | 0 | 31 | -9.276445 | hypothetical protein | |
| SPA2370 | 2 | 30 | -8.874990 | lipoprotein | |
| SPA2371 | 2 | 33 | -9.989273 | secreted protein | |
| SPA2372 | 2 | 34 | -10.745314 | transcriptionl regulator | |
| SPA2373 | 3 | 35 | -9.969570 | outer membrane protein | |
| SPA2375 | 3 | 33 | -9.442132 | transmembrane regulator | |
| SPA2376 | 3 | 23 | -5.242732 | rtn protein | |
| SPA2377 | 4 | 22 | -4.569068 | hypothetical protein | |
| SPA2378 | 3 | 22 | -3.983631 | transmembrane regulator | |
| SPA2379 | 3 | 21 | -3.291545 | fimbrial protein | |
| SPA2380 | 3 | 21 | -3.289545 | fimbrial chaperone protein | |
| SPA2381 | 1 | 20 | -3.788200 | outer membrane fimbrial usher protein | |
| SPA2382 | 1 | 34 | -10.884422 | fimbrial protein | |
| SPA2383 | 4 | 42 | -12.777612 | fimbrial chaperone protein | |
| SPA2384 | 5 | 47 | -13.610340 | secreted protein | |
| SPA2385 | 4 | 46 | -10.416798 | O-antigen conversion: glucosyl transferase | |
| SPA2386 | 5 | 45 | -9.225495 | O-antigen conversion: bactoprenyl transferase | |
| SPA2387 | 6 | 46 | -8.231454 | O-antigen conversion: translocase | |
| SPA2388 | 5 | 42 | -5.064371 | tailspike | |
| SPA2389 | 9 | 41 | -3.055075 | regulatory | |
| SPA2390 | 9 | 40 | -2.944720 | DNA transfer protein | |
| SPA2391 | 8 | 36 | -2.813016 | DNA transfer protein | |
| SPA2392 | 9 | 35 | -3.515976 | DNA transfer protein | |
| SPA2393 | 8 | 33 | -4.232136 | hypothetical protein | |
| SPA2394 | 7 | 36 | -3.969569 | portal protein | |
| SPA2395 | 6 | 39 | -4.342859 | hypothetical protein | |
| SPA2396 | 5 | 38 | -4.303496 | hypothetical protein | |
| SPA2397 | 3 | 40 | -4.527342 | lysozyme | |
| SPA2398 | 3 | 40 | -3.438571 | lysis (holin) | |
| SPA2399 | 3 | 40 | -4.520574 | antitermination | |
| SPA2400 | 4 | 41 | -5.539205 | hypothetical protein | |
| SPA2401 | 3 | 39 | -5.659055 | hypothetical protein | |
| SPA2402 | 7 | 37 | -4.917193 | hypothetical protein | |
| SPA2403 | 6 | 37 | -6.832108 | hypothetical protein | |
| SPA2404 | 6 | 40 | -7.208621 | hypothetical protein | |
| SPA2405 | 6 | 36 | -4.394577 | hypothetical protein | |
| SPA2406 | 5 | 36 | -5.264234 | hypothetical protein | |
| SPA2407 | 6 | 35 | -5.445800 | hypothetical protein | |
| SPA2408 | 6 | 35 | -5.856906 | hypothetical protein | |
| SPA2409 | 7 | 36 | -6.102580 | hypothetical protein | |
| SPA2410 | 6 | 35 | -6.062653 | DNA replication (helicase) | |
| SPA2411 | 7 | 39 | -8.826385 | DNA replication | |
| SPA2412 | 8 | 41 | -9.251833 | hypothetical protein | |
| SPA2413 | 8 | 40 | -9.726103 | transcriptional activator-regulatory protein | |
| SPA2414 | 8 | 40 | -9.551619 | transcriptional activator-regulatory protein | |
| SPA2415 | 7 | 39 | -9.164936 | hypothetical protein | |
| SPA2416 | 10 | 38 | -9.736969 | superinfection exclusion | |
| SPA2417 | 12 | 40 | -8.353051 | hypothetical protein | |
| SPA2418 | 10 | 37 | -7.545221 | antirestriction protein | |
| SPA2419 | 7 | 42 | -7.742029 | hypothetical protein | |
| SPA2420 | 4 | 38 | -7.863684 | hypothetical protein | |
| SPA2421 | 5 | 38 | -8.296282 | hypothetical protein | |
| SPA2422 | 4 | 35 | -6.807249 | hypothetical protein | |
| SPA2423 | 5 | 36 | -4.734209 | hypothetical protein | |
| SPA2424 | 4 | 35 | -4.438933 | hypothetical protein | |
| SPA2425 | 7 | 33 | -3.362467 | hypothetical protein | |
| SPA2426 | 9 | 36 | -3.830787 | hypothetical protein | |
| SPA2427 | 5 | 24 | -1.833805 | hypothetical protein | |
| SPA2428 | 3 | 20 | -0.718010 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2367 | TCRTETA | 56 | 1e-10 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2373 | ENTEROVIROMP | 134 | 7e-43 | Enterobacterial virulence outer membrane protein si... | |
>ENTEROVIROMP#Enterobacterial virulence outer membrane protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2381 | PF00577 | 765 | 0.0 | Outer membrane usher protein FimD | |
>PF00577#Outer membrane usher protein FimD | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2388 | PF01540 | 34 | 0.002 | Adhesin lipoprotein | |
>PF01540#Adhesin lipoprotein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2400 | HTHFIS | 27 | 0.005 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2410 | DNABINDINGHU | 31 | 0.002 | Prokaryotic integration host factor signature. | |
>DNABINDINGHU#Prokaryotic integration host factor signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2424 | HTHFIS | 26 | 0.027 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 40 | SPA2445 | SPA2501 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SPA2445 | -2 | 15 | -3.009044 | phosphoheptose isomerase | |
| SPA2446 | 0 | 19 | -3.302913 | acyl-CoA dehydrogenase | |
| SPA2447 | 8 | 27 | -4.032402 | hydrolase | |
| SPA2448 | 11 | 29 | -4.846947 | secreted protein | |
| SPA2449 | 11 | 30 | -4.734638 | outer membrane adhesin | |
| SPA2451 | 11 | 29 | -3.880382 | transcriptional regulator | |
| SPA2452 | 12 | 28 | -2.478696 | fimbrail protein | |
| SPA2453 | 12 | 27 | -1.694724 | outermembrane fimbrial usher protein | |
| SPA2454 | 9 | 35 | -7.494698 | fimbrial subunit | |
| SPA2455 | 8 | 34 | -6.314848 | fimbrial protein | |
| SPA2456 | 9 | 29 | -2.817012 | hypothetical protein | |
| SPA2457 | 9 | 31 | -3.296591 | hypothetical protein | |
| SPA2458 | 9 | 33 | -4.089417 | hypothetical protein | |
| SPA2459 | 8 | 32 | -4.328651 | LysR-family transcriptional regulator SinR | |
| SPA2460 | 9 | 31 | -2.421687 | ybeJ-like protein | |
| SPA2462 | 8 | 32 | -2.723982 | outer-membrane fimbrial usher protein | |
| SPA2463 | 6 | 38 | -9.700495 | periplasmic fimbrial chaperone protein | |
| SPA2464 | 5 | 32 | 0.303750 | lipoprotein | |
| SPA2465 | 4 | 28 | 1.429401 | hypothetical protein | |
| SPA2466 | 4 | 27 | 0.243679 | hypothetical protein | |
| SPA2467 | 4 | 26 | -1.239417 | hypothetical protein | |
| SPA2469 | 4 | 25 | -1.912884 | hypothetical protein | |
| SPA2470 | 4 | 25 | -1.412260 | Rhs-family protein | |
| SPA2471 | 6 | 32 | -7.518846 | hypothetical protein | |
| SPA2472 | 5 | 41 | -8.227891 | hypothetical protein | |
| SPA2473 | 0 | 22 | 2.271751 | hypothetical protein | |
| SPA2474 | 0 | 22 | 2.667218 | secreted protein | |
| SPA2475 | 1 | 22 | 2.094760 | hypothetical protein | |
| SPA2476 | 1 | 22 | 3.493325 | secreted protein | |
| SPA2478 | 1 | 24 | 4.593686 | hypothetical protein | |
| SPA2479 | 0 | 22 | 3.501704 | inner membrane protein | |
| SPA2480 | 0 | 20 | -1.250946 | shiga-like toxin A subunit | |
| SPA2481 | 0 | 19 | -0.712363 | hypothetical protein | |
| SPA2482 | 1 | 20 | 0.138194 | hypothetical protein | |
| SPA2483 | 2 | 20 | -2.080416 | hypothetical protein | |
| SPA2484 | 2 | 25 | -5.525929 | lipoprotein | |
| SPA2485 | 5 | 27 | -7.158279 | hypothetical protein | |
| SPA2486 | 6 | 30 | -8.486691 | hypothetical protein | |
| SPA2487 | 1 | 17 | -2.822722 | hypothetical protein | |
| SPA2488 | -1 | 18 | -0.729198 | hypothetical protein | |
| SPA2489 | -1 | 16 | -1.750545 | hypothetical protein | |
| SPA2490 | -1 | 16 | -1.966397 | hypothetical protein | |
| SPA2491 | -1 | 13 | 2.352365 | hypothetical protein | |
| SPA2492 | -1 | 13 | 2.218839 | hypothetical protein | |
| SPA2493 | -1 | 15 | 3.246345 | hypothetical protein | |
| SPA2494 | 0 | 16 | 3.407663 | hypothetical protein | |
| SPA2495 | 0 | 17 | 5.041242 | hypothetical protein | |
| SPA2496 | 0 | 17 | 5.461062 | ClpB-like protein | |
| SPA2497 | 2 | 20 | 5.892612 | hypothetical protein | |
| SPA2499 | 1 | 20 | 5.439407 | hypothetical protein | |
| SPA2500 | 0 | 18 | 4.690567 | hypothetical protein | |
| SPA2501 | 0 | 15 | 4.017386 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2449 | ENTEROVIROMP | 33 | 5e-04 | Enterobacterial virulence outer membrane protein si... | |
>ENTEROVIROMP#Enterobacterial virulence outer membrane protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2453 | PF00577 | 69 | 4e-14 | Outer membrane usher protein FimD | |
>PF00577#Outer membrane usher protein FimD | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2462 | PF00577 | 824 | 0.0 | Outer membrane usher protein FimD | |
>PF00577#Outer membrane usher protein FimD | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2469 | BACINVASINB | 28 | 0.008 | Salmonella/Shigella invasin protein B signature. | |
>BACINVASINB#Salmonella/Shigella invasin protein B signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2482 | OMPADOMAIN | 70 | 2e-15 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2496 | HTHFIS | 34 | 0.002 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 41 | SPA2530 | SPA2652 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SPA2530 | -1 | 25 | -3.170896 | hypothetical protein | |
| SPA2531 | 0 | 18 | -1.060933 | hypothetical protein | |
| SPA2532 | 2 | 21 | -0.437197 | 50S ribosomal protein L19 | |
| SPA2533 | 0 | 16 | -0.137961 | tRNA(guanine-N1)methyltransferase | |
| SPA2534 | 1 | 17 | -1.445800 | 16S rRNA processing protein | |
| SPA2535 | 0 | 15 | -1.152636 | 30S ribosomal protein S16 | |
| SPA2536 | 0 | 14 | -1.482768 | signal recognition particle protein | |
| SPA2537 | 1 | 13 | -2.793361 | hypothetical protein | |
| SPA2538 | 0 | 12 | -1.729617 | hypothetical protein | |
| SPA2539 | 2 | 13 | -2.156793 | hypothetical protein | |
| SPA2540 | 1 | 11 | -0.849646 | heat shock protein GrpE (heat shock protein | |
| SPA2541 | 0 | 12 | -0.947201 | hypothetical protein | |
| SPA2542 | 0 | 11 | -0.896544 | inorganic polyphosphate/ATP-NAD kinase | |
| SPA2543 | 2 | 15 | 3.961024 | DNA repair protein | |
| SPA2544 | 3 | 15 | 4.242373 | small protein A | |
| SPA2545 | 2 | 14 | 4.265277 | hypothetical protein | |
| SPA2546 | 2 | 14 | 4.074417 | hypothetical protein | |
| SPA2547 | 2 | 14 | 3.901590 | SsrA (tmRNA)-binding protein | |
| SPA2548 | 2 | 15 | 3.991785 | hypothetical protein | |
| SPA2549 | -2 | 11 | 1.247792 | type I secretion protein | |
| SPA2550 | -1 | 13 | 0.426645 | type I secretion protein, ATP-binding protein | |
| SPA2551 | 3 | 23 | -1.722722 | type I secretion protein | |
| SPA2554 | 6 | 30 | -2.133362 | hypothetical protein | |
| SPA2555 | 5 | 28 | -1.186818 | positive regulator of late gene transcription | |
| SPA2556 | 4 | 25 | -0.564276 | regulator of late gene expression | |
| SPA2557 | 5 | 22 | 0.439355 | phage tail protein | |
| SPA2558 | 4 | 23 | 0.549896 | hypothetical protein | |
| SPA2559 | 3 | 21 | -0.513744 | hypothetical protein | |
| SPA2560 | 2 | 19 | -1.267913 | phage tail protein | |
| SPA2561 | 3 | 20 | -1.763411 | major tail tube protein | |
| SPA2562 | 2 | 19 | -1.814773 | major tail sheath protein | |
| SPA2563 | 3 | 23 | -1.835154 | inversion of adjacent DNA; at locus of e14 | |
| SPA2564 | 3 | 23 | -1.416942 | invasion-associated secreted protein | |
| SPA2565 | 5 | 24 | 1.479122 | phage tail fiber protein | |
| SPA2566 | 5 | 25 | 2.731318 | phage tail fiber protein | |
| SPA2567 | 8 | 29 | 4.933363 | phage tail protein | |
| SPA2568 | 8 | 32 | 6.009560 | phage baseplate assembly protein | |
| SPA2569 | 7 | 29 | 5.600157 | phage baseplate assembly protein | |
| SPA2570 | 7 | 30 | 6.022824 | phage baseplate assembly protein | |
| SPA2571 | 8 | 27 | 5.245128 | phage tail completion protein | |
| SPA2572 | 7 | 27 | 4.982620 | phage tail protein | |
| SPA2573 | 8 | 29 | 5.757903 | regulatory protein | |
| SPA2574 | 8 | 28 | 6.176317 | hypothetical protein | |
| SPA2575 | 7 | 29 | 5.101075 | lysozyme | |
| SPA2576 | 7 | 31 | 4.890808 | secretion protein | |
| SPA2577 | 6 | 31 | 4.399266 | phage tail protein | |
| SPA2578 | 4 | 30 | 3.537636 | capsid completion protein | |
| SPA2579 | 3 | 25 | 0.954852 | phage terminase | |
| SPA2580 | 3 | 20 | -2.860226 | major capsid protein | |
| SPA2581 | 3 | 21 | -6.213649 | capsid protein | |
| SPA2582 | 3 | 25 | -7.802358 | terminase subunit | |
| SPA2583 | 6 | 38 | -11.932904 | capsid portal protein | |
| SPA2584 | 9 | 49 | -15.213678 | hypothetical protein | |
| SPA2585 | 4 | 27 | -6.347974 | hypothetical protein | |
| SPA2586 | 3 | 23 | -4.096726 | hypothetical protein | |
| SPA2587 | 3 | 22 | -1.525460 | hypothetical protein | |
| SPA2588 | 3 | 21 | -1.051356 | hypothetical protein | |
| SPA2589 | 3 | 21 | -0.695800 | hypothetical protein | |
| SPA2590 | 3 | 20 | -1.052130 | hypothetical protein | |
| SPA2591 | 4 | 36 | -5.300451 | DNA adenine methylase | |
| SPA2592 | 5 | 33 | -3.076753 | exonuclease | |
| SPA2593 | 5 | 29 | -1.542217 | hypothetical protein | |
| SPA2594 | 6 | 31 | -4.726314 | hypothetical protein | |
| SPA2595 | 3 | 30 | -4.868389 | hypothetical protein | |
| SPA2596 | 4 | 31 | -5.319762 | hypothetical protein | |
| SPA2597 | 4 | 24 | -2.069364 | phage regulatory protein | |
| SPA2598 | 5 | 22 | -1.961561 | phage regulatory protein | |
| SPA2599 | 5 | 23 | -0.748639 | phage repressor protein cI | |
| SPA2600 | 4 | 22 | -0.648400 | phage integrase | |
| SPA2601 | 3 | 23 | 0.610766 | bacteriophage integrase | |
| SPA2602 | 4 | 28 | 2.328826 | hypothetical protein | |
| SPA2603 | 4 | 25 | 0.256128 | hypothetical protein | |
| SPA2604 | 3 | 22 | -1.206722 | hypothetical protein | |
| SPA2605 | 3 | 24 | -2.872577 | hypothetical protein | |
| SPA2607 | 4 | 24 | -1.642108 | hypothetical protein | |
| SPA2608 | 3 | 25 | -2.653487 | hypothetical protein | |
| SPA2609 | 4 | 24 | -2.382075 | hypothetical protein | |
| SPA2610 | 3 | 22 | -1.399850 | hypothetical protein | |
| SPA2611 | 3 | 24 | 0.293158 | hypothetical protein | |
| SPA2612 | 3 | 24 | 1.770077 | hypothetical protein | |
| SPA2613 | 3 | 25 | 1.698883 | hypothetical protein | |
| SPA2614 | 4 | 24 | 1.922086 | hypothetical protein | |
| SPA2615 | 3 | 21 | 0.124531 | hypothetical protein | |
| SPA2616 | 3 | 21 | -0.784198 | hypothetical protein | |
| SPA2617 | 3 | 20 | -1.369399 | hypothetical protein | |
| SPA2618 | 2 | 19 | -1.266181 | hypothetical protein | |
| SPA2619 | 1 | 19 | -1.759604 | hypothetical protein | |
| SPA2620 | 1 | 21 | -1.883770 | hypothetical protein | |
| SPA2621 | 0 | 24 | -3.078197 | hypothetical protein | |
| SPA2622 | 2 | 26 | -2.786430 | hypothetical protein | |
| SPA2623 | 1 | 22 | -1.578523 | hypothetical protein | |
| SPA2624 | 0 | 15 | 1.259690 | hypothetical protein | |
| SPA2625 | 0 | 13 | 2.769937 | hypothetical protein | |
| SPA2626 | -1 | 13 | 2.655281 | Flagellar synthesis: repressor of fliC | |
| SPA2627 | 0 | 12 | 2.402791 | Flagellar synthesis: phase 2 flagellin (filament | |
| SPA2629 | 0 | 14 | 2.915276 | glycosyltransferase | |
| SPA2630 | 0 | 15 | 1.526351 | ABC transporter | |
| SPA2631 | 2 | 19 | -2.208390 | ferric enterochelin esterase | |
| SPA2632 | 3 | 25 | -5.813447 | hypothetical protein | |
| SPA2633 | 3 | 26 | -6.252189 | TonB-dependent outer membrane siderophore | |
| SPA2635 | 1 | 26 | -5.391530 | inner membrane protein | |
| SPA2636 | 1 | 21 | -4.423453 | hypothetical protein | |
| SPA2637 | 0 | 16 | -3.659379 | virulence protein | |
| SPA2638 | -2 | 13 | -1.383683 | transcriptional regulator | |
| SPA2639 | -2 | 14 | 1.426805 | nickel transporter | |
| SPA2640 | -3 | 14 | 2.955881 | two-component system sensor kinase | |
| SPA2641 | -2 | 16 | 2.593089 | transcriptional regulator | |
| SPA2642 | -1 | 20 | 3.390576 | hypothetical protein | |
| SPA2643 | 0 | 22 | 3.916063 | hypothetical protein | |
| SPA2644 | 0 | 20 | 3.949501 | hypothetical protein | |
| SPA2645 | 1 | 17 | 2.890723 | hypothetical protein | |
| SPA2646 | 2 | 17 | 2.831275 | Gab protein | |
| SPA2647 | 3 | 15 | 2.136687 | GAB DTP gene cluster repressor | |
| SPA2648 | 4 | 14 | 0.931727 | succinate-semialdehyde dehydrogenase | |
| SPA2649 | 4 | 14 | -0.462891 | 4-aminobutyrate aminotransferase | |
| SPA2650 | 3 | 18 | -1.669983 | GabA permease (4-amino butyrate transport | |
| SPA2651 | 1 | 23 | -1.535078 | transcriptional regulator | |
| SPA2652 | 3 | 23 | -4.239660 | LysM domain-containing protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2543 | RTXTOXIND | 31 | 0.009 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2546 | FLGMOTORFLIM | 28 | 0.018 | Flagellar motor switch protein FliM signature. | |
>FLGMOTORFLIM#Flagellar motor switch protein FliM signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2548 | INTIMIN | 46 | 3e-06 | Intimin signature. | |
>INTIMIN#Intimin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2549 | RTXTOXIND | 36 | 4e-04 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2551 | RTXTOXIND | 243 | 3e-78 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2558 | IGASERPTASE | 35 | 0.002 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2564 | SOPEPROTEIN | 432 | e-158 | Salmonella type III secretion SopE effector protein ... | |
>SOPEPROTEIN#Salmonella type III secretion SopE effector protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2576 | 60KDINNERMP | 25 | 0.035 | 60kDa inner membrane protein signature. | |
>60KDINNERMP#60kDa inner membrane protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2602 | ICENUCLEATIN | 30 | 0.033 | Ice nucleation protein signature. | |
>ICENUCLEATIN#Ice nucleation protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2627 | FLAGELLIN | 274 | 2e-88 | Flagellin signature. | |
>FLAGELLIN#Flagellin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2630 | PF05272 | 34 | 0.007 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2640 | PF06580 | 33 | 0.003 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2641 | HTHFIS | 97 | 2e-25 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2652 | INTIMIN | 27 | 0.028 | Intimin signature. | |
>INTIMIN#Intimin signature. | |||||
| 42 | SPA2692 | SPA2784 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SPA2692 | -1 | 15 | 3.076927 | PTS system glucitol/sorbitol-specific | |
| SPA2693 | -1 | 14 | 2.290304 | sorbitol-6-phosphate 2-dehydrogenase | |
| SPA2694 | -1 | 14 | 2.516556 | glucitol operon activator protein | |
| SPA2695 | -1 | 13 | 3.805192 | glucitol operon repressor | |
| SPA2696 | 0 | 13 | 4.473163 | phosphosugar binding protein | |
| SPA2697 | -1 | 12 | 4.046387 | sigma-54-dependent transriptional regulator | |
| SPA2698 | 0 | 12 | 3.423734 | flavoprotein | |
| SPA2699 | 0 | 13 | 4.236099 | rubredoxin reductase | |
| SPA2700 | 1 | 14 | 4.692769 | hydrogenase maturation protein | |
| SPA2701 | -1 | 19 | 2.923085 | electron transport protein | |
| SPA2702 | -1 | 25 | 3.560610 | hypothetical protein | |
| SPA2703 | 1 | 30 | 4.501530 | hydrogenase 3 maturation protease | |
| SPA2704 | 1 | 30 | 5.540978 | formate hydrogenlyase maturation protein | |
| SPA2705 | 1 | 28 | 5.593809 | formate hydrogenlyase subunit 7 | |
| SPA2706 | 2 | 27 | 4.974982 | formate hydrogenlyase subunit 6 | |
| SPA2707 | 2 | 24 | 4.559082 | formate hydrogenlyase subunit 5 | |
| SPA2708 | 2 | 18 | 4.515601 | formate hydrogenlyase subunit 4 | |
| SPA2709 | 2 | 18 | 4.260800 | formate hydrogenlyase subunit 3 | |
| SPA2710 | 1 | 17 | 2.725195 | formate hydrogenlyase subunit 2 | |
| SPA2711 | 1 | 15 | 3.146409 | formate hydrogenlyase regulatory protein | |
| SPA2712 | 0 | 13 | 2.974568 | HypA protein | |
| SPA2713 | 0 | 14 | 3.358960 | hydrogenase isoenzymes formation protein HypB | |
| SPA2714 | 0 | 14 | 2.736376 | hydrogenase isoenzymes formation protein HypC | |
| SPA2715 | -1 | 15 | 2.544807 | hydrogenase expression/formation protein HypD | |
| SPA2716 | 0 | 15 | 1.942838 | hydrogenase isoenzymes formation protein HypE | |
| SPA2717 | -1 | 13 | 0.604166 | transcriptional activator of the formate | |
| SPA2718 | -2 | 13 | -0.703291 | hypothetical protein | |
| SPA2719 | -2 | 13 | -2.162286 | Iron transport protein, periplasmic-binding | |
| SPA2720 | -2 | 20 | -5.710848 | Iron transport protein, ATP-binding component | |
| SPA2721 | -1 | 26 | -7.333092 | Iron transport protein, inner membrane | |
| SPA2722 | 1 | 34 | -9.527566 | Iron transport protein, inner membrane | |
| SPA2723 | 3 | 42 | -10.388886 | hypothetical protein | |
| SPA2724 | 2 | 40 | -9.607902 | AraC-family transcriptional regulator | |
| SPA2725 | 3 | 40 | -9.528723 | AraC-family transcriptional regulator | |
| SPA2726 | 3 | 38 | -7.246929 | hypothetical protein found within S. typhi | |
| SPA2727 | 3 | 35 | -6.144703 | oxygen-regulated invasion protein | |
| SPA2728 | 3 | 34 | -7.166271 | oxygen-regulated invasion protein | |
| SPA2729 | 3 | 31 | -8.373296 | pathogenicity 1 island effector protein | |
| SPA2730 | 3 | 30 | -8.973543 | pathogenicity 1 island effector protein | |
| SPA2731 | 2 | 31 | -9.358551 | pathogenicity 1 island effector protein | |
| SPA2732 | 2 | 31 | -9.703657 | pathogenicity 1 island effector protein | |
| SPA2733 | 2 | 32 | -11.174086 | AraC family transcriptional regulator | |
| SPA2734 | 2 | 33 | -11.145994 | invasion protein regulator | |
| SPA2735 | 2 | 32 | -9.182888 | cell invasion protein | |
| SPA2736 | 2 | 32 | -8.349909 | stpA-like protein | |
| SPA2737 | 0 | 28 | -7.287448 | chaperone (associated with virulence) | |
| SPA2738 | 1 | 25 | -5.217684 | hypothetical protein | |
| SPA2739 | 1 | 25 | -5.263052 | acyl carrier protein | |
| SPA2740 | 1 | 23 | -5.646466 | pathogenicity island 1 effector protein | |
| SPA2741 | 1 | 21 | -5.457526 | pathogenicity island 1 effector protein | |
| SPA2742 | 1 | 22 | -5.332648 | pathogenicity island 1 effector protein | |
| SPA2743 | 1 | 22 | -6.050004 | pathogenicity island 1 effector protein | |
| SPA2744 | -1 | 27 | -7.033173 | hypothetical protein | |
| SPA2745 | -1 | 27 | -6.157893 | secretory protein (associated with virulence) | |
| SPA2746 | -1 | 27 | -5.499219 | secretory protein (associated with virulence) | |
| SPA2747 | -2 | 23 | -3.938679 | secretory protein (associated with virulence) | |
| SPA2748 | -2 | 24 | -4.247423 | secretory protein (associated with virulence) | |
| SPA2749 | -2 | 24 | -4.594316 | surface presentation of antigens protein | |
| SPA2750 | -1 | 23 | -5.714108 | antigen presentation protein SpaN | |
| SPA2751 | -2 | 24 | -6.199650 | virulence-associated secretory protein | |
| SPA2752 | -2 | 24 | -6.056000 | virulence-associated secretory apparatus ATP | |
| SPA2753 | -1 | 27 | -7.845117 | virulence-associated secretory protein | |
| SPA2754 | -1 | 25 | -7.472499 | secretory protein | |
| SPA2755 | -1 | 27 | -7.222594 | cell invasion protein | |
| SPA2756 | 1 | 28 | -6.932021 | secretory protein (associated with virulence) | |
| SPA2757 | 4 | 30 | -7.068579 | AraC-family regulatory protein | |
| SPA2758 | 5 | 34 | -7.774973 | cell adherance/invasion protein | |
| SPA2759 | -3 | 13 | -0.209314 | hypothetical protein | |
| SPA2760 | -3 | 12 | 0.099346 | hypothetical protein | |
| SPA2761 | -3 | 11 | 0.672621 | hypothetical protein | |
| SPA2764 | -2 | 10 | 1.431805 | hypothetical protein | |
| SPA2765 | -3 | 10 | 2.656865 | hypothetical protein | |
| SPA2766 | -2 | 10 | 3.253207 | DNA mismatch repair protein | |
| SPA2767 | -2 | 11 | 3.232898 | hypothetical protein | |
| SPA2768 | -2 | 11 | 3.125568 | membrane transport protein | |
| SPA2769 | -3 | 12 | 4.152563 | LysR-family transcriptional regulator | |
| SPA2770 | -2 | 13 | 4.937533 | permease | |
| SPA2771 | -2 | 12 | 4.401390 | hypothetical protein | |
| SPA2772 | -2 | 13 | 4.452018 | hydroxypyruvate isomerase | |
| SPA2773 | -1 | 11 | 3.732914 | sugar aldolase | |
| SPA2774 | -1 | 11 | 3.635396 | hypothetical protein | |
| SPA2775 | 1 | 11 | 2.155677 | 3-hydroxyisobutyrate dehydrogenase | |
| SPA2776 | 0 | 15 | 0.705208 | DeoR family transcriptional regulator | |
| SPA2777 | -1 | 14 | 0.771900 | slyA-like protein | |
| SPA2778 | -1 | 14 | 1.061775 | hypothetical protein | |
| SPA2779 | 1 | 17 | 0.416421 | hypothetical protein | |
| SPA2780 | 0 | 17 | 0.858698 | RNA polymerase sigma subunit RpoS (sigma-38) | |
| SPA2781 | 1 | 16 | 1.822252 | lipoprotein NlpD | |
| SPA2782 | 2 | 17 | 2.700445 | L-isoaspartyl protein carboxyl methyltransferase | |
| SPA2783 | 2 | 16 | 1.927448 | stationary-phase survival protein | |
| SPA2784 | 2 | 15 | 1.532738 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2693 | DHBDHDRGNASE | 84 | 1e-21 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2695 | ARGREPRESSOR | 27 | 0.044 | Bacterial arginine repressor signature. | |
>ARGREPRESSOR#Bacterial arginine repressor signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2697 | HTHFIS | 373 | e-127 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2714 | TYPE4SSCAGA | 27 | 0.011 | Type IV secretion system CagA exotoxin signature. | |
>TYPE4SSCAGA#Type IV secretion system CagA exotoxin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2717 | HTHFIS | 384 | e-129 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2719 | adhesinb | 321 | e-112 | Adhesin B signature. | |
>adhesinb#Adhesin B signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2725 | BORPETOXINA | 31 | 0.007 | Bordetella pertussis toxin A subunit signature. | |
>BORPETOXINA#Bordetella pertussis toxin A subunit signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2729 | FLGMRINGFLIF | 43 | 7e-07 | Flagellar M-ring protein signature. | |
>FLGMRINGFLIF#Flagellar M-ring protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2733 | PF07212 | 28 | 0.044 | Hyaluronoglucosaminidase | |
>PF07212#Hyaluronoglucosaminidase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2736 | BACYPHPHTASE | 303 | 1e-99 | Salmonella/Yersinia modular tyrosine phosphatase si... | |
>BACYPHPHTASE#Salmonella/Yersinia modular tyrosine phosphatase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2737 | PF05932 | 34 | 5e-05 | Tir chaperone protein (CesT) | |
>PF05932#Tir chaperone protein (CesT) | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2742 | BACINVASINC | 514 | 0.0 | Salmonella/Shigella invasin protein C signature. | |
>BACINVASINC#Salmonella/Shigella invasin protein C signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2743 | BACINVASINB | 835 | 0.0 | Salmonella/Shigella invasin protein B signature. | |
>BACINVASINB#Salmonella/Shigella invasin protein B signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2744 | SYCDCHAPRONE | 128 | 2e-40 | Gram-negative bacterial type III secretion SycD cha... | |
>SYCDCHAPRONE#Gram-negative bacterial type III secretion SycD | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2745 | TYPE3IMSPROT | 340 | e-118 | Type III secretion system inner membrane S protein ... | |
>TYPE3IMSPROT#Type III secretion system inner membrane S protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2746 | TYPE3IMRPROT | 188 | 2e-61 | Type III secretion system inner membrane R protein ... | |
>TYPE3IMRPROT#Type III secretion system inner membrane R protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2747 | TYPE3IMQPROT | 89 | 4e-27 | Type III secretion system inner membrane Q protein ... | |
>TYPE3IMQPROT#Type III secretion system inner membrane Q protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2748 | TYPE3IMPPROT | 303 | e-107 | Type III secretion system inner membrane P protein ... | |
>TYPE3IMPPROT#Type III secretion system inner membrane P protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2749 | TYPE3OMOPROT | 537 | 0.0 | Type III secretion system outer membrane O protein ... | |
>TYPE3OMOPROT#Type III secretion system outer membrane O protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2750 | SSPANPROTEIN | 601 | 0.0 | Salmonella invasion protein InvJ signature. | |
>SSPANPROTEIN#Salmonella invasion protein InvJ signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2751 | SSPAMPROTEIN | 167 | 2e-56 | Salmonella surface presentation of antigen gene typ... | |
>SSPAMPROTEIN#Salmonella surface presentation of antigen gene type M | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2753 | SSPAKPROTEIN | 205 | 7e-72 | Invasion protein B family signature. | |
>SSPAKPROTEIN#Invasion protein B family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2755 | INVEPROTEIN | 604 | 0.0 | Salmonella/Shigella invasion protein E (InvE) signat... | |
>INVEPROTEIN#Salmonella/Shigella invasion protein E (InvE) | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2756 | TYPE3OMGPROT | 576 | 0.0 | Type III secretion system outer membrane G protein ... | |
>TYPE3OMGPROT#Type III secretion system outer membrane G protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2768 | TCRTETB | 83 | 2e-19 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2771 | NUCEPIMERASE | 88 | 9e-22 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2781 | RTXTOXIND | 32 | 0.004 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| 43 | SPA2794 | SPA2817 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SPA2794 | -2 | 25 | -4.132009 | hypothetical protein | |
| SPA2795 | 0 | 18 | -3.571585 | hypothetical protein | |
| SPA2796 | -1 | 14 | -1.289928 | hypothetical protein | |
| SPA2797 | 0 | 13 | -0.026220 | hypothetical protein | |
| SPA2798 | 0 | 15 | 0.609647 | hypothetical protein | |
| SPA2801 | 0 | 14 | 0.701987 | hypothetical protein | |
| SPA2802 | 2 | 26 | 2.274118 | 3'-phosphoadenosine 5'-phosphosulfate | |
| SPA2803 | 1 | 26 | 1.413752 | sulfite reductase (NADPH) hemoprotein subunit | |
| SPA2804 | 2 | 25 | 0.479006 | sulfite reductase (NADPH) flavoprotein subunit | |
| SPA2805 | 1 | 25 | -1.431857 | 6-pyruvoyl tetrahydrobiopterin synthase | |
| SPA2807 | 0 | 21 | -0.091928 | hypothetical protein | |
| SPA2809 | 0 | 21 | 0.174843 | enolase | |
| SPA2810 | -1 | 13 | 0.552329 | CTP synthetase | |
| SPA2811 | 0 | 11 | 0.763117 | hypothetical protein | |
| SPA2812 | 2 | 12 | 0.398635 | fimbrial subunit | |
| SPA2813 | 1 | 13 | -1.477546 | outer membrane usher protein | |
| SPA2814 | 4 | 25 | -5.831165 | periplasmic fimbrial chaperone | |
| SPA2815 | 5 | 32 | -7.192197 | fimbrial subunit | |
| SPA2816 | 0 | 19 | -4.320321 | fimbrial subunit | |
| SPA2817 | -2 | 17 | -3.362467 | fimbrial subunit |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2795 | PHPHTRNFRASE | 29 | 0.025 | Phosphoenolpyruvate-protein phosphotransferase sign... | |
>PHPHTRNFRASE#Phosphoenolpyruvate-protein phosphotransferase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2809 | ANTHRAXTOXNA | 29 | 0.036 | Anthrax toxin LF subunit signature. | |
>ANTHRAXTOXNA#Anthrax toxin LF subunit signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2813 | PF00577 | 702 | 0.0 | Outer membrane usher protein FimD | |
>PF00577#Outer membrane usher protein FimD | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2815 | FIMBRIALPAPF | 34 | 2e-04 | Escherichia coli: P pili tip fibrillum papF protein... | |
>FIMBRIALPAPF#Escherichia coli: P pili tip fibrillum papF protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2816 | FIMBRIALPAPF | 37 | 6e-06 | Escherichia coli: P pili tip fibrillum papF protein... | |
>FIMBRIALPAPF#Escherichia coli: P pili tip fibrillum papF protein | |||||
| 44 | SPA2889 | SPA2900 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SPA2889 | 3 | 23 | -4.754926 | amino acid transport protein | |
| SPA2890 | 5 | 26 | -2.525547 | hypothetical protein | |
| SPA2891 | 7 | 26 | 1.599246 | inner membrane protein | |
| SPA2892 | 7 | 28 | 1.662699 | hypothetical protein | |
| SPA2893 | 7 | 25 | 0.654200 | hypothetical protein | |
| SPA2894 | 7 | 25 | 0.118865 | hypothetical protein | |
| SPA2895 | 6 | 28 | 2.407857 | fimbrial chaperone protein | |
| SPA2896 | 6 | 26 | 1.499957 | outer membrane fimbrial usher protein | |
| SPA2897 | 7 | 27 | -5.165876 | fimbrial protein | |
| SPA2898 | 6 | 27 | -5.206206 | hypothetical protein | |
| SPA2900 | 2 | 23 | -2.843795 | transposase for insertion sequence element |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2896 | PF00577 | 632 | 0.0 | Outer membrane usher protein FimD | |
>PF00577#Outer membrane usher protein FimD | |||||
| 45 | SPA2976 | SPA2997 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SPA2976 | 0 | 10 | -3.192182 | nucleoside permease | |
| SPA2977 | 1 | 16 | -4.683934 | ornithine decarboxylase isozyme | |
| SPA2978 | 3 | 38 | -13.308704 | hypothetical protein | |
| SPA2980 | 16 | 57 | -20.874544 | *hypothetical protein | |
| SPA2981 | 18 | 60 | -21.597078 | hypothetical protein | |
| SPA2982 | 18 | 57 | -21.143475 | hypothetical protein | |
| SPA2983 | 16 | 56 | -20.864556 | bacteriocin immunity protein | |
| SPA2984 | 14 | 55 | -20.812423 | bacteriocin immunity protein | |
| SPA2985 | 12 | 55 | -21.017454 | hypothetical protein | |
| SPA2986 | 11 | 48 | -19.362467 | hypothetical protein | |
| SPA2987 | 7 | 42 | -16.761160 | hypothetical protein | |
| SPA2988 | 4 | 38 | -13.845677 | hypothetical protein | |
| SPA2989 | 3 | 26 | -6.665634 | hypothetical protein | |
| SPA2990 | 4 | 26 | -5.927697 | membrane protein | |
| SPA2991 | 2 | 23 | -4.827181 | hypothetical protein | |
| SPA2992 | 1 | 24 | -4.013170 | LysR family transcriptional regulator | |
| SPA2993 | 2 | 22 | -3.261790 | hypothetical protein | |
| SPA2994 | 1 | 20 | -2.809370 | amino acid transport protein | |
| SPA2995 | 1 | 22 | -3.692500 | hypothetical protein | |
| SPA2996 | 1 | 23 | -4.126474 | oxidoreductase | |
| SPA2997 | 1 | 17 | -3.230491 | aldehyde dehydrogenase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2995 | PRTACTNFAMLY | 26 | 0.030 | Pertactin virulence factor family signature. | |
>PRTACTNFAMLY#Pertactin virulence factor family signature. | |||||
| 46 | SPA3135 | SPA3163 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SPA3135 | 2 | 15 | 1.598622 | phosphoheptose isomerase | |
| SPA3136 | 1 | 18 | 2.593489 | lipoprotein | |
| SPA3137 | 0 | 18 | 1.729183 | hypothetical protein | |
| SPA3138 | 0 | 16 | 2.445156 | hypothetical protein | |
| SPA3139 | 1 | 17 | 2.965956 | hypothetical protein | |
| SPA3140 | 1 | 17 | 2.536347 | hypothetical protein | |
| SPA3141 | 0 | 20 | 3.236308 | acetyltransferase | |
| SPA3142 | 1 | 17 | 2.120399 | hypothetical protein | |
| SPA3143 | 1 | 25 | 2.570792 | protease | |
| SPA3144 | 3 | 29 | 1.928430 | hypothetical protein | |
| SPA3146 | 3 | 30 | 1.853922 | amino acid permease | |
| SPA3147 | 5 | 34 | 1.784592 | ATP-dependent RNA helicase | |
| SPA3148 | 5 | 33 | 1.140745 | hypothetical protein | |
| SPA3149 | 5 | 36 | 1.470551 | polynucleotide phosphorylase | |
| SPA3151 | 5 | 30 | 0.800182 | 30S ribosomal protein S15 | |
| SPA3152 | 5 | 28 | 0.794012 | tRNA pseudouridine 55 synthase (psi55 synthase) | |
| SPA3153 | 5 | 29 | 0.385681 | ribosome-binding factor A (P15B protein) | |
| SPA3154 | 3 | 26 | 0.983096 | protein chain initiation factor 2 | |
| SPA3155 | 1 | 17 | 0.394364 | L factor | |
| SPA3156 | 2 | 19 | 1.344912 | hypothetical protein | |
| SPA3158 | 1 | 18 | 1.227798 | *argininosuccinate synthetase | |
| SPA3160 | 0 | 16 | 1.097367 | *protein-export membrane protein | |
| SPA3161 | 1 | 17 | 0.963851 | PGM/PMM-family protein | |
| SPA3162 | 0 | 15 | 0.412953 | dihydropteroate synthase | |
| SPA3163 | 2 | 17 | 0.726846 | cell division protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA3135 | RTXTOXINA | 28 | 0.034 | Gram-negative bacterial RTX toxin determinant A family... | |
>RTXTOXINA#Gram-negative bacterial RTX toxin determinant A family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA3137 | NUCEPIMERASE | 29 | 0.009 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA3141 | PF00577 | 27 | 0.040 | Outer membrane usher protein FimD | |
>PF00577#Outer membrane usher protein FimD | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA3154 | TCRTETOQM | 73 | 2e-15 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA3160 | SECGEXPORT | 158 | 7e-54 | Protein-export SecG membrane protein signature. | |
>SECGEXPORT#Protein-export SecG membrane protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA3163 | HTHFIS | 34 | 0.002 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 47 | SPA3213 | SPA3225 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SPA3213 | -1 | 17 | 3.312554 | ATP/GTP-binding protein | |
| SPA3214 | 0 | 24 | 5.502781 | hypothetical protein | |
| SPA3215 | 0 | 25 | 5.833202 | serine protease | |
| SPA3216 | -1 | 26 | 5.692651 | serine protease | |
| SPA3217 | 0 | 26 | 5.385729 | inner membrane protein | |
| SPA3218 | 0 | 28 | 4.924724 | oxaloacetate decarboxylase subunit beta | |
| SPA3219 | 0 | 20 | 2.116122 | oxaloacetate decarboxylase subunit alpha | |
| SPA3220 | -1 | 18 | -2.244581 | oxaloacetate decarboxylase subunit gamma | |
| SPA3221 | 0 | 16 | -2.738067 | tartrate dehydratase | |
| SPA3222 | 1 | 16 | -2.050131 | tartrate dehydratase | |
| SPA3224 | 3 | 17 | -2.245061 | transcriptional regulator | |
| SPA3225 | 4 | 16 | -2.588909 | GntR family transcriptional regulator |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA3215 | V8PROTEASE | 69 | 4e-15 | V8 serine protease family signature. | |
>V8PROTEASE#V8 serine protease family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA3216 | V8PROTEASE | 53 | 4e-10 | V8 serine protease family signature. | |
>V8PROTEASE#V8 serine protease family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA3219 | RTXTOXIND | 32 | 0.007 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| 48 | SPA3410 | SPA3442 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SPA3410 | -2 | 20 | 3.134373 | hypothetical protein | |
| SPA3411 | -3 | 20 | 3.282919 | high-affinity branched-chain amino acid | |
| SPA3412 | -2 | 18 | 2.520528 | high-affinity branched-chain amino acid | |
| SPA3413 | -1 | 18 | 2.301556 | high-affinity branched-chain amino acid | |
| SPA3414 | 0 | 17 | 1.386756 | high-affinity branched-chain amino acid | |
| SPA3415 | -1 | 18 | 1.783164 | leucine-specific binding protein | |
| SPA3416 | 0 | 20 | 2.288463 | hypothetical protein | |
| SPA3417 | 2 | 19 | 2.275066 | hypothetical protein | |
| SPA3418 | 2 | 17 | 2.552072 | high-affinity branched-chain amino acid | |
| SPA3419 | 2 | 16 | 2.078053 | RNA polymerase sigma-32 factor | |
| SPA3420 | 3 | 15 | 2.185586 | cell division protein | |
| SPA3421 | 2 | 14 | 2.043612 | cell division ATP-binding protein FtsE | |
| SPA3422 | 2 | 14 | 3.852540 | cell division protein | |
| SPA3423 | 2 | 15 | 3.885432 | hypothetical protein | |
| SPA3424 | 1 | 15 | 3.791049 | hypothetical protein | |
| SPA3425 | 1 | 14 | 3.450185 | hypothetical protein | |
| SPA3426 | 1 | 13 | 3.321035 | hypothetical protein | |
| SPA3427 | 0 | 13 | 3.703832 | heavy metal-transporting ATPase | |
| SPA3428 | 0 | 13 | 1.301227 | methyl-accepting chemotaxis citrate transducer | |
| SPA3429 | 2 | 15 | 1.490440 | hypothetical protein | |
| SPA3430 | 1 | 14 | 1.522398 | hypothetical protein | |
| SPA3431 | 0 | 15 | 2.132261 | lipoprotein | |
| SPA3432 | -2 | 15 | 3.214261 | hypothetical protein | |
| SPA3433 | -1 | 13 | 3.429254 | hypothetical protein | |
| SPA3434 | -1 | 11 | 2.651422 | hypothetical protein | |
| SPA3435 | 1 | 12 | 0.566655 | nickel responsive regulator | |
| SPA3436 | 0 | 13 | 0.017216 | ABC-transporter ATP-binding protein | |
| SPA3437 | 1 | 14 | -1.688942 | ABC transporter ATP-binding protein | |
| SPA3438 | 3 | 27 | -6.557631 | HlyD-family secretion protein | |
| SPA3439 | 7 | 35 | -9.736229 | hypothetical protein | |
| SPA3440 | 2 | 30 | -7.776086 | aminotransferase | |
| SPA3441 | 0 | 19 | -4.895486 | regulatory protein | |
| SPA3442 | 0 | 17 | -4.403514 | DNA-binding protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA3425 | SHIGARICIN | 27 | 0.026 | Ribosome inactivating protein family signature. | |
>SHIGARICIN#Ribosome inactivating protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA3427 | ACRIFLAVINRP | 30 | 0.039 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA3429 | PF01206 | 101 | 2e-32 | SirA family protein | |
>PF01206#SirA family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA3432 | TCRTETA | 49 | 2e-08 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA3434 | ENTSNTHTASED | 30 | 0.006 | Enterobactin synthetase component D signature. | |
>ENTSNTHTASED#Enterobactin synthetase component D signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA3436 | ABC2TRNSPORT | 47 | 3e-08 | ABC-2 type transport system membrane protein signat... | |
>ABC2TRNSPORT#ABC-2 type transport system membrane protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA3438 | RTXTOXIND | 77 | 9e-18 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA3439 | TCRTETB | 30 | 0.016 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| 49 | SPA3467 | SPA3472 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SPA3467 | -1 | 13 | 3.071876 | hypothetical protein | |
| SPA3468 | -1 | 13 | 3.276861 | 2-dehydro-3-deoxygluconokinase | |
| SPA3469 | -2 | 14 | 3.401504 | zinc-protease precursor | |
| SPA3470 | -2 | 14 | 3.945862 | C4-dicarboxylate transport protein | |
| SPA3471 | -1 | 14 | 4.239334 | hypothetical protein | |
| SPA3472 | -1 | 14 | 3.999889 | hypothetical protein |
| 50 | SPA3485 | SPA3503 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SPA3485 | -1 | 15 | 3.018077 | dipeptide transport system permease protein | |
| SPA3486 | -1 | 12 | 2.320690 | dipeptide transport system permease protein | |
| SPA3487 | -2 | 11 | 1.909802 | periplasmic dipeptide transport protein | |
| SPA3488 | -1 | 12 | 2.604373 | xanthine permease | |
| SPA3489 | -1 | 10 | 3.392981 | hypothetical protein | |
| SPA3490 | -1 | 9 | 3.428304 | lacI-family transcriptional regulator | |
| SPA3493 | 0 | 11 | 2.896323 | *hypothetical protein | |
| SPA3494 | -1 | 12 | 2.959978 | 3-methyladenine DNA glycosylase I, constitutive | |
| SPA3495 | -1 | 11 | 2.994341 | acetyltransferase | |
| SPA3496 | -1 | 11 | 2.666294 | biotin sulfoxide reductase | |
| SPA3497 | 0 | 13 | 0.608450 | outer membrane protein | |
| SPA3498 | 0 | 16 | -0.888144 | 2-hydroxyacid dehydrogenase | |
| SPA3499 | 2 | 24 | -4.249385 | hypothetical protein | |
| SPA3501 | 3 | 19 | -1.382147 | cold shock protein | |
| SPA3502 | 4 | 18 | -0.423760 | hypothetical protein | |
| SPA3503 | 5 | 21 | -0.280956 | acetyltransferase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA3489 | PF05272 | 31 | 0.008 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA3495 | SACTRNSFRASE | 34 | 8e-05 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA3497 | OMPADOMAIN | 118 | 4e-34 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
| 51 | SPA3523 | SPA3531 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SPA3523 | -1 | 20 | 3.055544 | hypothetical protein | |
| SPA3524 | -1 | 21 | 3.686713 | dicarboxylate-binding periplasmic protein | |
| SPA3525 | -2 | 21 | 4.649609 | L-xylulose kinase | |
| SPA3526 | -2 | 18 | 3.504782 | hexulose-6-phosphate synthase | |
| SPA3527 | -2 | 17 | 3.096792 | sugar-phosphate isomerase | |
| SPA3528 | -2 | 13 | 3.045802 | sugar isomerase | |
| SPA3529 | -2 | 13 | 3.299458 | transcriptional regulator | |
| SPA3530 | -1 | 13 | 3.473114 | hypothetical protein | |
| SPA3531 | -1 | 13 | 3.084419 | aldehyde dehydrogenase B |
| 52 | SPA3561 | SPA3572 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SPA3561 | 1 | 11 | -3.793767 | 2-amino-3-ketobutyrate coenzyme A ligase | |
| SPA3562 | 2 | 19 | -6.679420 | ADP-L-glycero-D-manno-heptose-6-epimerase | |
| SPA3563 | 3 | 25 | -8.923700 | ADP-heptose--LPS-heptosyltransferase II | |
| SPA3564 | 4 | 36 | -12.985432 | lipopolysaccharide heptosyltransferase-1 | |
| SPA3565 | 6 | 43 | -15.754325 | O-antigen ligase | |
| SPA3566 | 5 | 44 | -15.775661 | lipopolysaccharide | |
| SPA3567 | 5 | 48 | -17.955854 | lipopolysaccharide core biosynthesis protein | |
| SPA3568 | 4 | 45 | -16.733415 | lipopolysaccharide core biosynthesis protein | |
| SPA3569 | 3 | 41 | -14.154612 | lipopolysaccharide 1,2-glucosyltransferase | |
| SPA3570 | 0 | 36 | -11.956864 | lipopolysaccharide 1,3-galactosyltransferase | |
| SPA3571 | -1 | 28 | -8.674520 | lipopolysaccharide 1,6-galactosyltransferase | |
| SPA3572 | -2 | 24 | -6.864310 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA3562 | NUCEPIMERASE | 99 | 3e-26 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| 53 | SPA3595 | SPA3608 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SPA3595 | -1 | 12 | 3.095054 | tRNA (guanosine-2'-O)-methyltransferase | |
| SPA3596 | -1 | 11 | 2.587274 | ATP-dependent DNA helicase | |
| SPA3597 | -1 | 10 | 0.911617 | glutamate permease | |
| SPA3598 | -2 | 11 | -0.157039 | purine permease | |
| SPA3599 | -1 | 13 | -2.953796 | hypothetical protein | |
| SPA3601 | 3 | 16 | -3.266469 | sodium:galactoside family symporter | |
| SPA3603 | 3 | 20 | -4.737830 | *hypothetical protein | |
| SPA3604 | 3 | 19 | -4.462059 | hypothetical protein | |
| SPA3606 | 3 | 19 | -3.796576 | DNA-binding protein | |
| SPA3607 | 4 | 19 | -3.732464 | hypothetical protein | |
| SPA3608 | 2 | 13 | -1.799967 | autotransported protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA3596 | SECA | 41 | 1e-05 | SecA protein signature. | |
>SECA#SecA protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA3604 | IGASERPTASE | 35 | 2e-04 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA3608 | PERTACTIN | 119 | 1e-29 | Pertactin signature. | |
>PERTACTIN#Pertactin signature. | |||||
| 54 | SPA3626 | SPA3633 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SPA3626 | 2 | 24 | -4.427459 | inner membrane transport protein | |
| SPA3628 | 5 | 33 | -7.079493 | DNA-binding protein | |
| SPA3629 | 6 | 35 | -7.426220 | PTS system phosphocarrier protein | |
| SPA3630 | 6 | 35 | -7.862563 | hypothetical protein | |
| SPA3631 | 6 | 31 | -6.891511 | carbohydrate kinase | |
| SPA3632 | 3 | 27 | -6.163695 | PTS system transporter subunit IIC | |
| SPA3633 | 0 | 20 | -3.278292 | PTS system transporter subunit IIB |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA3626 | TCRTETA | 36 | 2e-04 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| 55 | SPA3658 | SPA3667 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SPA3658 | 1 | 33 | 7.544396 | heat shock protein B | |
| SPA3659 | 3 | 38 | 8.796417 | heat shock protein A | |
| SPA3660 | 4 | 40 | 10.164714 | lipoprotein | |
| SPA3661 | 5 | 43 | 11.109172 | ATP/GTP-binding protein | |
| SPA3663 | 7 | 53 | 13.631639 | heme lyase/disulfide oxidoreductase, cytochrome | |
| SPA3664 | 8 | 56 | 15.027966 | cytochrome c-type biogenesis protein F1 | |
| SPA3665 | 1 | 31 | 8.316365 | cytochrome c-type biogenesis protein E1 | |
| SPA3666 | 3 | 24 | 5.774291 | heme exporter protein D1 | |
| SPA3667 | 0 | 18 | 4.171987 | heme exporter protein C1 |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA3665 | PF04335 | 29 | 0.006 | VirB8 type IV secretion protein | |
>PF04335#VirB8 type IV secretion protein | |||||
| 56 | SPA3701 | SPA3710 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SPA3701 | 2 | 29 | 0.547391 | UDP-N-acetylglucosamine pyrophosphorylase | |
| SPA3702 | 4 | 32 | 0.625038 | hypothetical protein | |
| SPA3703 | 6 | 37 | 0.952838 | ATP synthase subunit epsilon | |
| SPA3704 | 6 | 39 | 0.829031 | ATP synthase subunit beta | |
| SPA3705 | 6 | 32 | 0.051457 | ATP synthase subunit gamma | |
| SPA3706 | 6 | 33 | -0.099415 | ATP synthase subunit alpha | |
| SPA3707 | 4 | 20 | -1.275057 | ATP synthase subunit delta | |
| SPA3708 | 3 | 20 | 0.029663 | ATP synthase subunit B | |
| SPA3709 | 2 | 17 | 0.016373 | ATP synthase subunit C | |
| SPA3710 | 2 | 13 | -0.328223 | ATP synthase subunit A |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA3708 | PYOCINKILLER | 27 | 0.043 | Pyocin S killer protein signature. | |
>PYOCINKILLER#Pyocin S killer protein signature. | |||||
| 57 | SPA3769 | SPA3793 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SPA3769 | -1 | 13 | 3.088885 | UDP-N-acetyl-D-mannosaminuronic acid | |
| SPA3770 | -1 | 12 | 2.506254 | amino acid permease | |
| SPA3776 | -1 | 12 | 2.413680 | ****Porphyrin biosynthetic protein | |
| SPA3777 | -1 | 11 | 0.361529 | uroporphyrinogen III methylase | |
| SPA3778 | -1 | 12 | -0.794161 | uroporphyrinogen III synthase | |
| SPA3779 | 0 | 13 | -1.390080 | porphobilinogen deaminase | |
| SPA3780 | 0 | 14 | -2.737746 | adenylate cyclase | |
| SPA3781 | 1 | 28 | -7.079157 | hypothetical protein | |
| SPA3782 | -2 | 19 | -4.358636 | hypothetical protein | |
| SPA3783 | -2 | 14 | 0.511407 | hypothetical protein | |
| SPA3784 | -1 | 16 | 2.444471 | CyaY protein | |
| SPA3785 | -1 | 15 | 2.417646 | hypothetical protein | |
| SPA3787 | -1 | 16 | 3.702750 | lipoprotein | |
| SPA3788 | 0 | 17 | 3.331326 | diaminopimelate epimerase | |
| SPA3789 | 0 | 15 | 2.004182 | hypothetical protein | |
| SPA3790 | -1 | 14 | 0.573231 | integrase/recombinase | |
| SPA3791 | -2 | 14 | 0.056099 | hypothetical protein | |
| SPA3792 | -2 | 15 | 0.075761 | DNA helicase II | |
| SPA3793 | 0 | 13 | -3.375437 | magnesium and cobalt transport protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA3769 | ADHESNFAMILY | 28 | 0.028 | Adhesin family signature. | |
>ADHESNFAMILY#Adhesin family signature. | |||||
| 58 | SPA3849 | SPA3855 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SPA3849 | -1 | 14 | -3.997706 | hypothetical protein | |
| SPA3850 | -2 | 13 | -3.986960 | GTP-binding protein | |
| SPA3851 | 1 | 21 | -5.732409 | hypothetical protein | |
| SPA3852 | 2 | 20 | -6.684145 | hypothetical protein | |
| SPA3853 | 1 | 19 | -7.026146 | hypothetical protein | |
| SPA3854 | 1 | 15 | -5.797309 | hypothetical protein | |
| SPA3855 | -1 | 13 | -3.326717 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA3850 | TCRTETOQM | 179 | 7e-51 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
| 59 | SPA3914 | SPA3920 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SPA3914 | 2 | 19 | -1.503760 | hypothetical protein | |
| SPA3915 | 1 | 18 | -1.496639 | sugar kinase | |
| SPA3916 | 3 | 20 | -2.912017 | regulatory protein | |
| SPA3917 | 2 | 21 | -3.345249 | ABC transporter ATP-binding protein | |
| SPA3918 | 4 | 23 | -3.610631 | ABC transporter permease | |
| SPA3919 | 1 | 21 | -3.435981 | ABC-transporter membrane protein | |
| SPA3920 | -1 | 18 | -3.052763 | ABC transporter substrate-binding protein |
| 60 | SPA4069 | SPA4097 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SPA4069 | -1 | 13 | -3.265096 | hypothetical protein | |
| SPA4070 | -1 | 17 | -6.099412 | lipoprotein | |
| SPA4071 | 1 | 20 | -8.358079 | excision nuclease subunit A | |
| SPA4072 | 3 | 30 | -8.496799 | single-strand DNA-binding protein | |
| SPA4073 | 4 | 32 | -9.857312 | hypothetical protein | |
| SPA4074 | 3 | 31 | -9.424208 | hypothetical protein | |
| SPA4075 | 3 | 30 | -8.665947 | type-I secretion protein | |
| SPA4076 | 3 | 29 | -8.004804 | type-I secretion protein | |
| SPA4077 | 3 | 27 | -7.008555 | inner membrane protein | |
| SPA4078 | -1 | 26 | -8.498503 | type-1 secretion protein | |
| SPA4079 | -2 | 14 | -0.822988 | hypothetical protein | |
| SPA4080 | -2 | 14 | 0.066011 | hypothetical protein | |
| SPA4081 | -2 | 13 | 2.230249 | regulatory protein SoxS | |
| SPA4082 | -3 | 13 | 2.406412 | SoxR protein | |
| SPA4084 | -3 | 13 | 2.883147 | glutathione-S-transferase | |
| SPA4085 | -3 | 16 | 3.051244 | xanthine/uracil permeases family protein | |
| SPA4086 | -2 | 17 | 2.920112 | sodium/hydrogen exchanger family protein | |
| SPA4087 | -2 | 16 | 2.390362 | lysR family regulatory protein | |
| SPA4088 | -2 | 19 | 1.912398 | hypothetical protein | |
| SPA4089 | -1 | 18 | 1.856545 | hypothetical protein | |
| SPA4090 | -1 | 17 | 1.653109 | Sodium:solute symporter family protein | |
| SPA4092 | -1 | 16 | 1.919531 | acetyl-coenzyme A synthetase | |
| SPA4093 | 0 | 18 | 2.949976 | hypothetical protein | |
| SPA4094 | 0 | 17 | 3.488249 | cytochrome c552 precursor | |
| SPA4095 | 2 | 18 | 4.337454 | cytochrome c-type protein NrfB precursor | |
| SPA4096 | 1 | 19 | 3.800067 | cytochrome c-type biogenesis protein | |
| SPA4097 | 2 | 18 | 3.245841 | cytochrome c-type biogenesis protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA4073 | HTHFIS | 29 | 0.014 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA4076 | RTXTOXIND | 266 | 8e-87 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA4077 | GPOSANCHOR | 49 | 4e-07 | Gram-positive coccus surface protein anchor signature. | |
>GPOSANCHOR#Gram-positive coccus surface protein anchor signature. | |||||
| 61 | SPA4125 | SPA4138 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SPA4125 | 2 | 16 | -0.951856 | anaerobic dimethyl sulfoxide reductase subunit | |
| SPA4126 | 2 | 20 | -4.284784 | hypothetical protein | |
| SPA4127 | 2 | 24 | -7.889830 | hypothetical protein | |
| SPA4128 | 6 | 36 | -11.854363 | hypothetical protein | |
| SPA4129 | 4 | 40 | -12.437040 | hypothetical protein | |
| SPA4130 | 3 | 37 | -10.734668 | hypothetical protein | |
| SPA4131 | 4 | 39 | -10.446656 | GerE family regulatory protein | |
| SPA4132 | 3 | 35 | -7.754990 | araC family regulatory protein | |
| SPA4133 | 0 | 18 | -0.737405 | hypothetical protein | |
| SPA4134 | 0 | 17 | -0.038733 | hypothetical protein | |
| SPA4135 | 1 | 13 | 0.202750 | acetyltransferase | |
| SPA4136 | 2 | 18 | -0.633709 | nonspecific acid phosphatase | |
| SPA4138 | 2 | 19 | 0.189446 | *transcriptional regulator |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA4135 | SACTRNSFRASE | 30 | 0.003 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA4138 | HTHTETR | 46 | 1e-08 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| 62 | SPA4168 | SPA4185 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SPA4168 | -1 | 11 | 3.105618 | arginine-binding periplasmic protein | |
| SPA4172 | -1 | 13 | 3.561248 | ***4Fe-4S binding protein | |
| SPA4173 | -1 | 14 | 3.624262 | hypothetical protein | |
| SPA4174 | -3 | 16 | 2.551511 | hypothetical protein | |
| SPA4175 | -2 | 13 | 2.923577 | N-acetylmuramoyl-L-alanine amidase | |
| SPA4176 | 0 | 16 | 2.273677 | DNA mismatch repair protein | |
| SPA4177 | 1 | 18 | 1.204986 | tRNA delta-2-isopentenylpyrophosphate (IPP) | |
| SPA4178 | 4 | 23 | 1.028415 | host factor-I protein | |
| SPA4179 | 4 | 21 | 0.888767 | HflX protein, putative GTP-binding protein | |
| SPA4180 | 3 | 20 | 1.172013 | HflK protein | |
| SPA4181 | 4 | 18 | 0.990706 | HflC protein | |
| SPA4182 | 2 | 16 | -0.061867 | hypothetical protein | |
| SPA4183 | 2 | 14 | 0.070866 | adenylosuccinate synthetase | |
| SPA4184 | 1 | 12 | -0.108152 | hypothetical protein | |
| SPA4185 | 2 | 11 | -0.076499 | ribonuclease R |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA4175 | PF03544 | 31 | 0.007 | Gram-negative bacterial tonB protein | |
>PF03544#Gram-negative bacterial tonB protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA4176 | ALARACEMASE | 30 | 0.027 | Alanine racemase signature. | |
>ALARACEMASE#Alanine racemase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA4179 | SECA | 33 | 0.002 | SecA protein signature. | |
>SECA#SecA protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA4181 | PYOCINKILLER | 29 | 0.030 | Pyocin S killer protein signature. | |
>PYOCINKILLER#Pyocin S killer protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA4185 | RTXTOXIND | 32 | 0.013 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| 63 | SPA4283 | SPA4323 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SPA4283 | -1 | 22 | -5.093373 | 5-keto-D-gluconate-5-reductase | |
| SPA4284 | 0 | 25 | -6.022041 | L-idonate 5-dehydrogenase | |
| SPA4285 | 1 | 33 | -8.006564 | D-gluconate kinase, thermosensitive | |
| SPA4286 | 2 | 29 | -7.173837 | alcohol dehydrogenase | |
| SPA4288 | 3 | 35 | -8.814663 | *integrase | |
| SPA4289 | 4 | 37 | -8.426183 | DNA methyltransferase SptAIM; protects DNA | |
| SPA4290 | 5 | 30 | -3.949640 | subunit S of type I restriction-modification | |
| SPA4291 | 2 | 28 | -1.708855 | subunit R of type I restriction-modification | |
| SPA4292 | 1 | 24 | 4.405478 | hypothetical protein | |
| SPA4293 | 2 | 24 | 4.347749 | hypothetical protein | |
| SPA4296 | 2 | 25 | 3.932707 | phage immunity repressor protein | |
| SPA4297 | 4 | 24 | 2.924796 | hypothetical protein | |
| SPA4298 | 2 | 24 | -2.140640 | hypothetical P4 phage protein | |
| SPA4299 | 4 | 37 | -8.765527 | hypothetical protein | |
| SPA4300 | 10 | 66 | -17.964618 | hypothetical protein | |
| SPA4301 | 10 | 61 | -16.483473 | hypothetical protein | |
| SPA4304 | 8 | 54 | -14.430030 | fimbrial structural protein | |
| SPA4305 | 7 | 44 | -12.116853 | fimbrial chaperone protein | |
| SPA4306 | 7 | 39 | -9.729939 | outer membrane fimbrial usher protein | |
| SPA4307 | 4 | 28 | -1.897425 | fimbrial regulator | |
| SPA4309 | 4 | 17 | -0.101478 | GerE-family regulatory protein | |
| SPA4310 | 4 | 19 | -2.799180 | hypothetical protein | |
| SPA4311 | 4 | 19 | -3.079108 | outer membrane protein | |
| SPA4312 | 3 | 19 | -3.687754 | hypothetical protein | |
| SPA4313 | 2 | 21 | -4.379681 | hypothetical protein | |
| SPA4314 | 2 | 20 | -3.878167 | hypothetical protein | |
| SPA4315 | 2 | 29 | -5.796284 | hypothetical protein | |
| SPA4316 | 0 | 20 | -2.843436 | hypothetical protein | |
| SPA4317 | 0 | 24 | -5.589349 | hypothetical protein | |
| SPA4319 | 0 | 27 | -6.160203 | hypothetical protein | |
| SPA4320 | 0 | 23 | -3.836767 | hypothetical protein | |
| SPA4321 | 1 | 25 | -5.114708 | hypothetical protein | |
| SPA4322 | 1 | 22 | -4.387935 | hypothetical protein | |
| SPA4323 | 1 | 21 | -4.806828 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA4283 | DHBDHDRGNASE | 140 | 1e-42 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA4296 | ICENUCLEATIN | 26 | 0.046 | Ice nucleation protein signature. | |
>ICENUCLEATIN#Ice nucleation protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA4299 | PF05775 | 30 | 0.015 | Enterobacteria AfaD invasin protein | |
>PF05775#Enterobacteria AfaD invasin protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA4306 | PF00577 | 724 | 0.0 | Outer membrane usher protein FimD | |
>PF00577#Outer membrane usher protein FimD | |||||
| 64 | SPA0047 | SPA0059 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SPA0047 | -2 | 12 | 0.408503 | isoleucyl-tRNA synthetase | |
| SPA0048 | -3 | 12 | -0.929920 | lipoprotein signal peptidase | |
| SPA0049 | -2 | 11 | -2.040805 | FkbB-type 16 kD peptidyl-prolyl cis-trans | |
| SPA0050 | -1 | 11 | 0.196092 | LytB protein | |
| SPA0051 | 0 | 18 | 2.295639 | hypothetical protein | |
| SPA0052 | 0 | 25 | 3.738715 | nucleoside hydrolase | |
| SPA0053 | -1 | 24 | 2.495726 | transcriptional regulatory protein citb | |
| SPA0054 | -1 | 23 | 2.928651 | transcriptional regulator | |
| SPA0055 | 0 | 27 | 5.129995 | oxaloacetate decarboxylase subunit beta | |
| SPA0056 | -2 | 19 | 3.243005 | oxaloacetate decarboxylase subunit alpha | |
| SPA0057 | -1 | 13 | 0.253352 | oxaloacetate decarboxylase subunit gamma | |
| SPA0058 | -1 | 11 | 0.408433 | citrate-sodium symporter | |
| SPA0059 | 0 | 10 | 1.704970 | [citrate (pro-3S)-lyase] ligase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0047 | LIPPROTEIN48 | 31 | 0.030 | Mycoplasma P48 major surface lipoprotein signature. | |
>LIPPROTEIN48#Mycoplasma P48 major surface lipoprotein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0049 | INFPOTNTIATR | 29 | 0.007 | Macrophage infectivity potentiator signature. | |
>INFPOTNTIATR#Macrophage infectivity potentiator signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0053 | HTHFIS | 69 | 7e-16 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0054 | CARBMTKINASE | 30 | 0.017 | Bacterial carbamate kinase signature. | |
>CARBMTKINASE#Bacterial carbamate kinase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0056 | RTXTOXIND | 32 | 0.007 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0059 | LPSBIOSNTHSS | 40 | 3e-06 | Lipopolysaccharide core biosynthesis protein signat... | |
>LPSBIOSNTHSS#Lipopolysaccharide core biosynthesis protein | |||||
| 65 | SPA0461 | SPA0472 | N ![]() | Y ![]() | Y | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SPA0461 | 1 | 30 | -8.131565 | phosphoglycerate transporter protein | |
| SPA0462 | 1 | 35 | -9.371880 | phosphoglycerate transport regulatory protein | |
| SPA0464 | 2 | 35 | -10.497801 | phosphoglycerate transport system | |
| SPA0465 | 3 | 35 | -11.095416 | outer membrane protease E | |
| SPA0467 | 2 | 30 | -9.348130 | lipopolysaccharide modification acyltransferase | |
| SPA0468 | 0 | 15 | -3.413203 | bactoprenol glucosyl transferase | |
| SPA0469 | -1 | 13 | -0.081154 | bactoprenol-linked glucose transferase | |
| SPA0471 | 0 | 10 | 0.693187 | *hypothetical protein | |
| SPA0472 | -1 | 10 | 1.383565 | VacJ lipoprotein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0461 | TCRTETA | 31 | 0.007 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0464 | HTHFIS | 248 | 6e-80 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0465 | OMPTIN | 472 | e-172 | Omptin serine protease signature. | |
>OMPTIN#Omptin serine protease signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0471 | PF06580 | 29 | 0.033 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0472 | VACJLIPOPROT | 398 | e-144 | VacJ lipoprotein signature. | |
>VACJLIPOPROT#VacJ lipoprotein signature. | |||||
| 66 | SPA0496 | SPA0504 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SPA0496 | -2 | 15 | 2.559541 | tRNA pseudouridine synthase A | |
| SPA0497 | 0 | 15 | 1.994030 | DedA protein (dsg-1 protein) | |
| SPA0498 | -1 | 11 | 1.689964 | acetyl-CoA carboxylase subunit beta | |
| SPA0499 | -1 | 10 | 0.392882 | folylpolyglutamate synthase | |
| SPA0500 | 0 | 12 | -1.140245 | DedD protein | |
| SPA0501 | 0 | 10 | -1.928848 | colicin V production protein (DedE protein) | |
| SPA0502 | 0 | 10 | -1.592502 | amidophosphoribosyltransferase | |
| SPA0503 | 0 | 13 | -1.745602 | transcriptional regulator | |
| SPA0504 | 0 | 12 | -1.896279 | amino acid decarboxylase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0496 | FbpA_PF05833 | 29 | 0.026 | Fibronectin-binding protein | |
>FbpA_PF05833#Fibronectin-binding protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0500 | PERTACTIN | 29 | 0.023 | Pertactin signature. | |
>PERTACTIN#Pertactin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0502 | ANTHRAXTOXNA | 34 | 0.002 | Anthrax toxin LF subunit signature. | |
>ANTHRAXTOXNA#Anthrax toxin LF subunit signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0503 | HTHFIS | 348 | e-118 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0504 | ALARACEMASE | 32 | 0.006 | Alanine racemase signature. | |
>ALARACEMASE#Alanine racemase signature. | |||||
| 67 | SPA0589 | SPA0597 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SPA0589 | -1 | 9 | -3.426570 | hypothetical protein | |
| SPA0590 | -1 | 9 | -2.383113 | hypothetical protein | |
| SPA0591 | 0 | 13 | -1.096877 | MR-MLE-family protein | |
| SPA0592 | 0 | 14 | 0.307383 | DNA gyrase subunit A | |
| SPA0593 | -2 | 12 | 0.501652 | sensor protein RcsC | |
| SPA0594 | -2 | 13 | 1.025684 | regulator of capsule synthesis B component | |
| SPA0595 | -3 | 11 | 1.450725 | two-component system sensor kinase | |
| SPA0597 | -2 | 15 | 2.959943 | outer membrane protein C |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0589 | NUCEPIMERASE | 28 | 0.031 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0590 | TCRTETB | 31 | 0.012 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0593 | HTHFIS | 80 | 1e-17 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0594 | HTHFIS | 48 | 8e-09 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0597 | ECOLIPORIN | 540 | 0.0 | E.coli/Salmonella-type porin signature. | |
>ECOLIPORIN#E.coli/Salmonella-type porin signature. | |||||
| 68 | SPA0734 | SPA0741 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SPA0734 | -1 | 15 | 3.752068 | two-component system response regulator | |
| SPA0735 | -1 | 16 | 4.259376 | two-component system sensor kinase | |
| SPA0736 | -1 | 16 | 3.499820 | transporter protein | |
| SPA0737 | -1 | 15 | 3.229573 | RND-family transporter protein | |
| SPA0738 | 0 | 15 | 3.368001 | RND-family transporter protein | |
| SPA0741 | -1 | 13 | 2.623066 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0734 | HTHFIS | 75 | 8e-18 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0735 | BCTERIALGSPF | 31 | 0.010 | Bacterial general secretion pathway protein F signa... | |
>BCTERIALGSPF#Bacterial general secretion pathway protein F | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0736 | TCRTETB | 124 | 3e-33 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0737 | ACRIFLAVINRP | 875 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0738 | ACRIFLAVINRP | 885 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0741 | SHAPEPROTEIN | 51 | 5e-09 | Bacterial cell shape determinant MreB/Mbl protein s... | |
>SHAPEPROTEIN#Bacterial cell shape determinant MreB/Mbl protein | |||||
| 69 | SPA0769 | SPA0778 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SPA0769 | 4 | 37 | -9.111934 | dTDP-glucose 4,6-dehydratase | |
| SPA0770 | 5 | 40 | -9.196286 | dTDP-4-dehydrorhamnose reductase | |
| SPA0771 | 8 | 42 | -10.181874 | TDP-glucose pyrophosphorylase | |
| SPA0772 | 9 | 46 | -11.903907 | dTDP-4-dehydrorhamnose 3,5-epimerase | |
| SPA0773 | 9 | 49 | -12.863714 | reductase RfbI | |
| SPA0774 | 7 | 52 | -14.712838 | glucose-1-phosphate cytidylyltransferase | |
| SPA0775 | 7 | 55 | -16.252676 | CDP-glucose 4,6-dehydratase | |
| SPA0776 | 8 | 59 | -18.248413 | dehydratase RfbH | |
| SPA0777 | 8 | 64 | -20.507307 | paratose synthase | |
| SPA0778 | 8 | 65 | -20.719682 | CDP-tyvelose-2-epimerase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0769 | NUCEPIMERASE | 176 | 1e-54 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0770 | NUCEPIMERASE | 41 | 3e-06 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0775 | NUCEPIMERASE | 73 | 1e-16 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0776 | PERTACTIN | 31 | 0.012 | Pertactin signature. | |
>PERTACTIN#Pertactin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0777 | NUCEPIMERASE | 64 | 6e-14 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0778 | NUCEPIMERASE | 157 | 2e-47 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| 70 | SPA0812 | SPA0819 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SPA0812 | -2 | 17 | 0.951721 | hypothetical protein | |
| SPA0813 | -1 | 16 | 3.483143 | hypothetical protein | |
| SPA0814 | -1 | 20 | 4.512334 | propionate kinase | |
| SPA0815 | 0 | 25 | 5.770481 | propanediol utilization protein PduV | |
| SPA0816 | 1 | 26 | 6.258271 | propanediol utilization protein PduU | |
| SPA0817 | 1 | 26 | 6.676313 | propanediol utilization protein PduT | |
| SPA0818 | 2 | 24 | 6.958389 | ferredoxin | |
| SPA0819 | 3 | 24 | 6.446243 | propanol dehydrogenase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0812 | FbpA_PF05833 | 27 | 0.023 | Fibronectin-binding protein | |
>FbpA_PF05833#Fibronectin-binding protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0814 | ACETATEKNASE | 582 | 0.0 | Acetate kinase family signature. | |
>ACETATEKNASE#Acetate kinase family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0815 | SALSPVBPROT | 27 | 0.047 | Salmonella virulence plasmid 65kDa B protein signature. | |
>SALSPVBPROT#Salmonella virulence plasmid 65kDa B protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0819 | BONTOXILYSIN | 30 | 0.014 | Bontoxilysin signature. | |
>BONTOXILYSIN#Bontoxilysin signature. | |||||
| 71 | SPA0889 | SPA0905 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SPA0889 | 0 | 13 | 0.443089 | flagellar biosynthetic protein FliR | |
| SPA0890 | -1 | 14 | 1.174655 | flagellar biosynthetic protein FliQ | |
| SPA0891 | -1 | 15 | 3.273445 | flagellar biosynthetic protein FliP | |
| SPA0892 | 0 | 14 | 3.210124 | flagellar protein FliO | |
| SPA0893 | -2 | 14 | 3.844192 | flagellar motor switch protein FliN | |
| SPA0894 | -1 | 17 | 4.568567 | flagellar motor switch protein FliM | |
| SPA0895 | 1 | 15 | 4.860523 | FliL protein | |
| SPA0896 | 0 | 13 | 4.834891 | flagellar hook-length control protein | |
| SPA0897 | -1 | 13 | 4.093197 | flagellar FliJ protein | |
| SPA0898 | -2 | 13 | 3.627967 | flagellum-specific ATP synthase | |
| SPA0899 | -1 | 13 | 2.231857 | flagellar assembly protein FliH | |
| SPA0900 | -2 | 14 | 1.836215 | flagellar motor switch protein FliG | |
| SPA0901 | -2 | 12 | 2.044523 | flagellar basal-body M-ring protein | |
| SPA0902 | -1 | 14 | -0.132684 | flagellar hook-basal body complex protein FliE | |
| SPA0903 | -2 | 15 | -0.686068 | hypothetical protein | |
| SPA0904 | -4 | 14 | -0.096377 | hypothetical protein | |
| SPA0905 | -3 | 11 | -0.887776 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0889 | TYPE3IMRPROT | 213 | 5e-71 | Type III secretion system inner membrane R protein ... | |
>TYPE3IMRPROT#Type III secretion system inner membrane R protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0890 | TYPE3IMQPROT | 67 | 1e-18 | Type III secretion system inner membrane Q protein ... | |
>TYPE3IMQPROT#Type III secretion system inner membrane Q protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0891 | FLGBIOSNFLIP | 328 | e-117 | Escherichia coli: Flagellar biosynthetic protein Fl... | |
>FLGBIOSNFLIP#Escherichia coli: Flagellar biosynthetic protein FliP | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0893 | FLGMOTORFLIN | 209 | 2e-73 | Flagellar motor switch protein FliN signature. | |
>FLGMOTORFLIN#Flagellar motor switch protein FliN signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0894 | FLGMOTORFLIM | 383 | e-135 | Flagellar motor switch protein FliM signature. | |
>FLGMOTORFLIM#Flagellar motor switch protein FliM signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0896 | FLGHOOKFLIK | 406 | e-143 | Flagellar hook-length control protein signature. | |
>FLGHOOKFLIK#Flagellar hook-length control protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0897 | FLGFLIJ | 206 | 4e-72 | Flagellar FliJ protein signature. | |
>FLGFLIJ#Flagellar FliJ protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0899 | FLGFLIH | 366 | e-132 | Flagellar assembly protein FliH signature. | |
>FLGFLIH#Flagellar assembly protein FliH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0900 | FLGMOTORFLIG | 339 | e-118 | Flagellar motor switch protein FliG signature. | |
>FLGMOTORFLIG#Flagellar motor switch protein FliG signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0901 | FLGMRINGFLIF | 783 | 0.0 | Flagellar M-ring protein signature. | |
>FLGMRINGFLIF#Flagellar M-ring protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0902 | FLGHOOKFLIE | 114 | 1e-36 | Flagellar hook-basal body complex protein FliE signa... | |
>FLGHOOKFLIE#Flagellar hook-basal body complex protein FliE | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0904 | PF01206 | 93 | 6e-29 | SirA family protein | |
>PF01206#SirA family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0905 | RTXTOXIND | 29 | 0.027 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| 72 | SPA0945 | SPA0954 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SPA0945 | -1 | 11 | 0.690291 | motility protein A | |
| SPA0946 | -1 | 12 | 0.971387 | motility protein B | |
| SPA0947 | -1 | 13 | 1.279346 | chemotaxis protein CheA | |
| SPA0948 | -2 | 14 | 1.325033 | purine binding chemotaxis protein | |
| SPA0950 | -1 | 12 | 1.999008 | chemotaxis protein methyltransferase | |
| SPA0951 | -1 | 13 | 2.689381 | protein-glutamate methylesterase | |
| SPA0952 | -1 | 13 | 1.776259 | chemotaxis protein CheY | |
| SPA0953 | -2 | 13 | 1.471293 | chemotaxis protein CheZ | |
| SPA0954 | -2 | 11 | 0.599744 | flagellar biosynthetic protein FlhB |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0945 | PF05844 | 32 | 0.002 | YopD protein | |
>PF05844#YopD protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0946 | OMPADOMAIN | 42 | 1e-06 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0947 | PF06580 | 42 | 7e-06 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0951 | HTHFIS | 66 | 7e-14 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0952 | HTHFIS | 89 | 7e-24 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA0954 | TYPE3IMSPROT | 419 | e-149 | Type III secretion system inner membrane S protein ... | |
>TYPE3IMSPROT#Type III secretion system inner membrane S protein | |||||
| 73 | SPA1101 | SPA1108 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SPA1101 | -1 | 11 | -0.006491 | 2-dehydro-3-deoxyphosphooctonate aldolase | |
| SPA1102 | -2 | 11 | 0.012496 | calcium/proton antiporter | |
| SPA1104 | -2 | 11 | 1.392576 | hypothetical protein | |
| SPA1105 | -2 | 14 | 1.656015 | invasin | |
| SPA1106 | -1 | 16 | 1.877952 | nitrate/nitrite response regulator protein NarL | |
| SPA1107 | 0 | 17 | 2.000469 | nitrate/nitrite sensor protein NarX | |
| SPA1108 | -2 | 16 | 1.290029 | nitrite extrusion protein (nitrite facilitator) |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA1101 | PF03309 | 28 | 0.046 | Bvg accessory factor | |
>PF03309#Bvg accessory factor | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA1105 | INTIMIN | 246 | 1e-74 | Intimin signature. | |
>INTIMIN#Intimin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA1106 | HTHFIS | 72 | 6e-17 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA1107 | PF06580 | 51 | 4e-09 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA1108 | TCRTETB | 30 | 0.025 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| 74 | SPA1425 | SPA1435 | N ![]() | Y ![]() | Y | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SPA1425 | 0 | 19 | -4.860052 | integral membrane transport protein | |
| SPA1426 | 0 | 22 | -6.559204 | cyclopropane-fatty-acyl-phospholipid synthase | |
| SPA1427 | 1 | 27 | -7.576303 | riboflavin synthase subunit alpha | |
| SPA1428 | 3 | 34 | -8.218265 | hypothetical protein | |
| SPA1431 | 5 | 45 | -11.122350 | **type III secretion protein | |
| SPA1432 | 5 | 44 | -10.195947 | type III secretion protein | |
| SPA1433 | 3 | 41 | -6.802426 | type III secretion protein | |
| SPA1434 | 2 | 35 | -6.615353 | type III secretion protein | |
| SPA1435 | 2 | 35 | -6.460463 | type III secretion protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA1425 | TCRTETB | 76 | 3e-17 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA1431 | TYPE3IMSPROT | 386 | e-136 | Type III secretion system inner membrane S protein ... | |
>TYPE3IMSPROT#Type III secretion system inner membrane S protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA1432 | TYPE3IMRPROT | 164 | 4e-52 | Type III secretion system inner membrane R protein ... | |
>TYPE3IMRPROT#Type III secretion system inner membrane R protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA1433 | TYPE3IMQPROT | 72 | 9e-21 | Type III secretion system inner membrane Q protein ... | |
>TYPE3IMQPROT#Type III secretion system inner membrane Q protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA1434 | TYPE3IMPPROT | 231 | 9e-80 | Type III secretion system inner membrane P protein ... | |
>TYPE3IMPPROT#Type III secretion system inner membrane P protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA1435 | TYPE3OMOPROT | 54 | 2e-10 | Type III secretion system outer membrane O protein ... | |
>TYPE3OMOPROT#Type III secretion system outer membrane O protein | |||||
| 75 | SPA1450 | SPA1466 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SPA1450 | 3 | 32 | -7.004349 | pathogenicity island protein | |
| SPA1451 | 3 | 35 | -7.671917 | pathogenicity island effector protein | |
| SPA1452 | 4 | 34 | -7.685469 | pathogenicity island effector protein | |
| SPA1453 | 4 | 37 | -8.918023 | pathogenicity island effector protein | |
| SPA1454 | 5 | 40 | -9.985365 | Type III secretion system chaperone protein | |
| SPA1455 | 7 | 43 | -10.940354 | pathogenicity island effector effector protein | |
| SPA1456 | 4 | 42 | -10.853540 | pathogenicity island protein | |
| SPA1457 | 4 | 42 | -11.025728 | secretion system protein | |
| SPA1458 | 4 | 39 | -9.834355 | pathogenicity island protein | |
| SPA1459 | 2 | 33 | -8.092680 | outer membrane secretory protein | |
| SPA1460 | 2 | 31 | -7.060329 | pathogenicity island secreted effector protein | |
| SPA1461 | 0 | 28 | -5.767530 | two-component sensor kinase | |
| SPA1462 | 0 | 17 | 0.190781 | two-component response regulator | |
| SPA1463 | 0 | 14 | 2.180498 | transcriptional regulator | |
| SPA1464 | -1 | 12 | 3.093163 | pathogenicity island protein | |
| SPA1465 | 0 | 13 | 1.683158 | hypothetical protein | |
| SPA1466 | 0 | 14 | 1.328299 | two-component response regulator |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA1450 | SYCDCHAPRONE | 77 | 5e-21 | Gram-negative bacterial type III secretion SycD cha... | |
>SYCDCHAPRONE#Gram-negative bacterial type III secretion SycD | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA1452 | PF05844 | 29 | 0.010 | YopD protein | |
>PF05844#YopD protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA1454 | SYCDCHAPRONE | 90 | 2e-25 | Gram-negative bacterial type III secretion SycD cha... | |
>SYCDCHAPRONE#Gram-negative bacterial type III secretion SycD | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA1455 | LIPPROTEIN48 | 27 | 0.047 | Mycoplasma P48 major surface lipoprotein signature. | |
>LIPPROTEIN48#Mycoplasma P48 major surface lipoprotein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA1459 | TYPE3OMGPROT | 581 | 0.0 | Type III secretion system outer membrane G protein ... | |
>TYPE3OMGPROT#Type III secretion system outer membrane G protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA1461 | HTHFIS | 68 | 1e-13 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA1462 | HTHFIS | 66 | 7e-15 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA1466 | HTHFIS | 84 | 2e-21 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 76 | SPA1666 | SPA1675 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SPA1666 | 1 | 15 | 2.473201 | ribonuclease E | |
| SPA1667 | -1 | 14 | 1.395952 | flagellar hook-associated protein 3 | |
| SPA1668 | -1 | 14 | 2.344374 | flagellar hook-associated protein 1 | |
| SPA1669 | -1 | 16 | 3.502418 | flagellar protein FlgJ | |
| SPA1670 | 1 | 14 | 3.279424 | flagellar P-ring protein | |
| SPA1671 | 2 | 15 | 2.895768 | flagellar L-ring protein | |
| SPA1672 | 2 | 15 | 2.840717 | flagellar basal-body rod protein FlgG (distal | |
| SPA1673 | 2 | 12 | 3.012563 | flagellar basal-body rod protein FlgF | |
| SPA1674 | 1 | 13 | 1.722968 | flagellar hook protein FlgE | |
| SPA1675 | 0 | 17 | 1.468451 | flagellar hook formation protein FlgD |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA1666 | IGASERPTASE | 56 | 9e-10 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA1667 | FLAGELLIN | 41 | 4e-06 | Flagellin signature. | |
>FLAGELLIN#Flagellin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA1668 | FLGHOOKAP1 | 664 | 0.0 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA1669 | FLGFLGJ | 499 | 0.0 | Flagellar protein FlgJ signature. | |
>FLGFLGJ#Flagellar protein FlgJ signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA1670 | FLGPRINGFLGI | 429 | e-153 | Flagellar P-ring protein signature. | |
>FLGPRINGFLGI#Flagellar P-ring protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA1671 | FLGLRINGFLGH | 353 | e-127 | Flagellar L-ring protein signature. | |
>FLGLRINGFLGH#Flagellar L-ring protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA1672 | FLGHOOKAP1 | 44 | 4e-07 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA1674 | FLGHOOKAP1 | 41 | 7e-06 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA1675 | SYCECHAPRONE | 29 | 0.010 | Gram-negative bacterial type III secretion SycE cha... | |
>SYCECHAPRONE#Gram-negative bacterial type III secretion SycE | |||||
| 77 | SPA1754 | SPA1760 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SPA1754 | 1 | 25 | -4.992403 | response regulator | |
| SPA1755 | 3 | 28 | -6.640745 | histidine kinase | |
| SPA1757 | 3 | 38 | -10.277209 | hypothetical protein | |
| SPA1758 | 3 | 38 | -10.119887 | hypothetical protein | |
| SPA1759 | 3 | 33 | -8.815818 | cell invasion protein | |
| SPA1760 | 3 | 32 | -9.156860 | cell invasion protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA1754 | HTHFIS | 83 | 1e-20 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA1755 | PF06580 | 34 | 0.001 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA1759 | TYPE3OMBPROT | 655 | 0.0 | Type III secretion system outer membrane B protein ... | |
>TYPE3OMBPROT#Type III secretion system outer membrane B protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA1760 | PF07824 | 165 | 1e-56 | Type III secretion chaperone | |
>PF07824#Type III secretion chaperone | |||||
| 78 | SPA1866 | SPA1872 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SPA1866 | 1 | 15 | 2.887533 | hypothetical protein | |
| SPA1867 | 0 | 14 | 1.196144 | oxidoreductase | |
| SPA1868 | -1 | 14 | 1.197159 | N-acetylmuramoyl-L-alanine amidase | |
| SPA1869 | 0 | 13 | 0.285485 | hypothetical protein | |
| SPA1870 | -1 | 13 | -0.688474 | lipoprotein | |
| SPA1871 | -3 | 13 | -1.418516 | arginine transport ATP-binding protein ArtP | |
| SPA1872 | -2 | 12 | -2.600501 | arginine/ornithine ABC transporter |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA1866 | NUCEPIMERASE | 55 | 2e-10 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA1867 | NUCEPIMERASE | 66 | 2e-14 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA1871 | PF05272 | 30 | 0.006 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA1872 | FLGFLIH | 30 | 0.006 | Flagellar assembly protein FliH signature. | |
>FLGFLIH#Flagellar assembly protein FliH signature. | |||||
| 79 | SPA1892 | SPA1899 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SPA1892 | 0 | 11 | 1.022638 | hypothetical protein | |
| SPA1893 | 0 | 13 | 0.794577 | putative tetR-family transcriptional regulator | |
| SPA1894 | -1 | 11 | 0.895062 | hypothetical protein | |
| SPA1895 | -2 | 12 | 0.268179 | hypothetical protein | |
| SPA1896 | -1 | 10 | 1.067003 | multidrug translocase MdfA | |
| SPA1897 | -1 | 11 | 0.602758 | permease | |
| SPA1898 | -1 | 9 | 0.475192 | deoxyribose operon repressor | |
| SPA1899 | 0 | 10 | 1.059302 | D-alanyl-D-alanine carboxypeptidase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA1892 | TCRTETA | 31 | 0.011 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA1893 | HTHTETR | 47 | 6e-09 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA1894 | TCRTETB | 33 | 0.002 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA1896 | TCRTETB | 43 | 2e-06 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA1899 | BLACTAMASEA | 47 | 5e-08 | Beta-lactamase class A signature. | |
>BLACTAMASEA#Beta-lactamase class A signature. | |||||
| 80 | SPA1933 | SPA1938 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SPA1933 | -2 | 15 | 2.259679 | ATP-dependent RNA helicase rhlE | |
| SPA1934 | -2 | 15 | 1.747323 | hypothetical tetR-family transcriptional | |
| SPA1935 | -2 | 16 | 2.231085 | HlyD-family secretion protein | |
| SPA1936 | -3 | 15 | 1.796450 | ABC transporter ATP-binding protein | |
| SPA1937 | -1 | 18 | 1.331992 | inner membrane protein | |
| SPA1938 | -1 | 17 | 0.880919 | inner membrane protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA1933 | SECA | 30 | 0.023 | SecA protein signature. | |
>SECA#SecA protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA1934 | HTHTETR | 66 | 2e-15 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA1935 | RTXTOXIND | 61 | 2e-12 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA1936 | PF05272 | 32 | 0.009 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA1938 | ABC2TRNSPORT | 46 | 1e-07 | ABC-2 type transport system membrane protein signat... | |
>ABC2TRNSPORT#ABC-2 type transport system membrane protein | |||||
| 81 | SPA2136 | SPA2141 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SPA2136 | -2 | 13 | 4.682988 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |
| SPA2137 | -1 | 12 | 5.189781 | isochorismatase | |
| SPA2138 | 0 | 11 | 5.557922 | 2,3-dihydroxybenzoate-AMP ligase | |
| SPA2139 | 1 | 13 | 5.615635 | isochorismate synthase EntC | |
| SPA2140 | 1 | 13 | 3.813006 | ferrienterobactin-binding periplasmic protein | |
| SPA2141 | 2 | 15 | 4.584553 | membrane protein p43 |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2136 | DHBDHDRGNASE | 338 | e-120 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2137 | ISCHRISMTASE | 425 | e-154 | Isochorismatase signature. | |
>ISCHRISMTASE#Isochorismatase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2140 | FERRIBNDNGPP | 59 | 4e-12 | Ferrichrome-binding periplasmic protein signature. | |
>FERRIBNDNGPP#Ferrichrome-binding periplasmic protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2141 | TCRTETB | 29 | 0.039 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| 82 | SPA2238 | SPA2247 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SPA2238 | 3 | 15 | 2.788460 | DNA polymerase III subunits gamma and tau | |
| SPA2239 | 1 | 13 | -0.174576 | adenine phosphoribosyltransferase | |
| SPA2240 | 1 | 14 | -0.976765 | hypothetical protein | |
| SPA2241 | 1 | 11 | -0.544432 | primosomal replication protein N | |
| SPA2242 | -1 | 10 | -0.373998 | hypothetical protein | |
| SPA2243 | -1 | 10 | -0.670956 | hypothetical protein | |
| SPA2244 | 0 | 10 | -0.967157 | integral membrane protein AefA | |
| SPA2245 | 0 | 14 | -1.376790 | acrAB operon repressor | |
| SPA2246 | 0 | 14 | -1.039031 | acriflavin resistance protein A | |
| SPA2247 | 0 | 14 | -2.017724 | acriflavin resistance protein B |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2238 | IGASERPTASE | 45 | 9e-07 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2243 | FLGFLIH | 31 | 0.005 | Flagellar assembly protein FliH signature. | |
>FLGFLIH#Flagellar assembly protein FliH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2244 | CHANLCOLICIN | 36 | 7e-04 | Channel forming colicin signature. | |
>CHANLCOLICIN#Channel forming colicin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2245 | HTHTETR | 204 | 8e-69 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2246 | RTXTOXIND | 43 | 1e-06 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2247 | ACRIFLAVINRP | 1366 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| 83 | SPA2310 | SPA2316 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SPA2310 | 0 | 20 | -0.643993 | nucleoside-specific channel-forming protein tsx | |
| SPA2311 | 1 | 16 | 0.535382 | hypothetical protein | |
| SPA2312 | 1 | 16 | 0.082723 | hypothetical protein | |
| SPA2313 | 1 | 16 | 0.142295 | deoR-family transcriptional regulator | |
| SPA2314 | 1 | 16 | 0.746391 | hypothetical protein | |
| SPA2315 | 1 | 17 | 1.091113 | protein-export membrane protein SecF | |
| SPA2316 | 1 | 17 | 0.817772 | protein-export membrane protein SecD |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2310 | CHANNELTSX | 491 | e-180 | Nucleoside-specific channel-forming protein Tsx signa... | |
>CHANNELTSX#Nucleoside-specific channel-forming protein Tsx | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2313 | ARGREPRESSOR | 33 | 4e-04 | Bacterial arginine repressor signature. | |
>ARGREPRESSOR#Bacterial arginine repressor signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2315 | SECFTRNLCASE | 341 | e-120 | Bacterial translocase SecF protein signature. | |
>SECFTRNLCASE#Bacterial translocase SecF protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2316 | SECFTRNLCASE | 69 | 6e-15 | Bacterial translocase SecF protein signature. | |
>SECFTRNLCASE#Bacterial translocase SecF protein signature. | |||||
| 84 | SPA2325 | SPA2329 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SPA2325 | 1 | 15 | 3.297026 | phosphate regulon sensor protein PhoR | |
| SPA2326 | 1 | 15 | 3.600524 | phosphate regulon transcriptional regulatory | |
| SPA2327 | 2 | 15 | 3.645260 | exonuclease SbcD | |
| SPA2328 | 2 | 14 | 3.219685 | exonuclease SbcC | |
| SPA2329 | -1 | 16 | 1.597850 | MFS family, arabinose polymer transporter |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2325 | PF06580 | 37 | 1e-04 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2326 | HTHFIS | 82 | 3e-20 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2327 | FRAGILYSIN | 29 | 0.028 | Fragilysin metallopeptidase (M10C) enterotoxin signat... | |
>FRAGILYSIN#Fragilysin metallopeptidase (M10C) enterotoxin | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2328 | RTXTOXIND | 48 | 2e-07 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2329 | TCRTETA | 50 | 9e-09 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| 85 | SPA2349 | SPA2356 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SPA2349 | 1 | 17 | -0.899467 | hypothetical protein | |
| SPA2350 | 1 | 17 | 0.318580 | flagellin structural protein | |
| SPA2351 | 1 | 17 | 3.439233 | delta-aminolevulinic acid dehydratase | |
| SPA2352 | 1 | 17 | 3.206926 | PrpE protein | |
| SPA2353 | 1 | 15 | 2.237202 | PrpD protein | |
| SPA2354 | 1 | 14 | 1.051058 | methylcitrate synthase | |
| SPA2355 | -1 | 15 | 1.431213 | carboxyvinyl-carboxyphosphonate | |
| SPA2356 | -1 | 14 | 0.973576 | propionate catabolism operon regulatory protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2349 | PF06291 | 30 | 0.002 | Lambda prophage Bor protein | |
>PF06291#Lambda prophage Bor protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2350 | PRTACTNFAMLY | 120 | 6e-30 | Pertactin virulence factor family signature. | |
>PRTACTNFAMLY#Pertactin virulence factor family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2351 | BINARYTOXINB | 32 | 0.003 | Binary toxin B family signature. | |
>BINARYTOXINB#Binary toxin B family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2356 | HTHFIS | 341 | e-114 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 86 | SPA2543 | SPA2551 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SPA2543 | 2 | 15 | 3.961024 | DNA repair protein | |
| SPA2544 | 3 | 15 | 4.242373 | small protein A | |
| SPA2545 | 2 | 14 | 4.265277 | hypothetical protein | |
| SPA2546 | 2 | 14 | 4.074417 | hypothetical protein | |
| SPA2547 | 2 | 14 | 3.901590 | SsrA (tmRNA)-binding protein | |
| SPA2548 | 2 | 15 | 3.991785 | hypothetical protein | |
| SPA2549 | -2 | 11 | 1.247792 | type I secretion protein | |
| SPA2550 | -1 | 13 | 0.426645 | type I secretion protein, ATP-binding protein | |
| SPA2551 | 3 | 23 | -1.722722 | type I secretion protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2543 | RTXTOXIND | 31 | 0.009 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2546 | FLGMOTORFLIM | 28 | 0.018 | Flagellar motor switch protein FliM signature. | |
>FLGMOTORFLIM#Flagellar motor switch protein FliM signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2548 | INTIMIN | 46 | 3e-06 | Intimin signature. | |
>INTIMIN#Intimin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2549 | RTXTOXIND | 36 | 4e-04 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2551 | RTXTOXIND | 243 | 3e-78 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| 87 | SPA2669 | SPA2675 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SPA2669 | -2 | 14 | 2.041573 | glycine betaine-binding periplasmic protein | |
| SPA2670 | -2 | 10 | 1.490633 | transmembrane transport protein | |
| SPA2671 | -2 | 10 | 0.486366 | transcriptional regulator | |
| SPA2672 | -2 | 10 | 1.223895 | multidrug resistance protein A | |
| SPA2673 | -2 | 13 | 1.072933 | multidrug resistance protein B | |
| SPA2675 | -1 | 13 | 0.436615 | autoinducer-2 production protein LuxS |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2669 | PF06057 | 29 | 0.014 | Type IV secretory pathway VirJ component | |
>PF06057#Type IV secretory pathway VirJ component | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2670 | TCRTETB | 46 | 1e-07 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2672 | RTXTOXIND | 74 | 1e-16 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2673 | TCRTETB | 129 | 8e-35 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2675 | LUXSPROTEIN | 287 | e-103 | Bacterial autoinducer-2 (AI-2) production protein Lu... | |
>LUXSPROTEIN#Bacterial autoinducer-2 (AI-2) production protein LuxS | |||||
| 88 | SPA2736 | SPA2756 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SPA2736 | 2 | 32 | -8.349909 | stpA-like protein | |
| SPA2737 | 0 | 28 | -7.287448 | chaperone (associated with virulence) | |
| SPA2738 | 1 | 25 | -5.217684 | hypothetical protein | |
| SPA2739 | 1 | 25 | -5.263052 | acyl carrier protein | |
| SPA2740 | 1 | 23 | -5.646466 | pathogenicity island 1 effector protein | |
| SPA2741 | 1 | 21 | -5.457526 | pathogenicity island 1 effector protein | |
| SPA2742 | 1 | 22 | -5.332648 | pathogenicity island 1 effector protein | |
| SPA2743 | 1 | 22 | -6.050004 | pathogenicity island 1 effector protein | |
| SPA2744 | -1 | 27 | -7.033173 | hypothetical protein | |
| SPA2745 | -1 | 27 | -6.157893 | secretory protein (associated with virulence) | |
| SPA2746 | -1 | 27 | -5.499219 | secretory protein (associated with virulence) | |
| SPA2747 | -2 | 23 | -3.938679 | secretory protein (associated with virulence) | |
| SPA2748 | -2 | 24 | -4.247423 | secretory protein (associated with virulence) | |
| SPA2749 | -2 | 24 | -4.594316 | surface presentation of antigens protein | |
| SPA2750 | -1 | 23 | -5.714108 | antigen presentation protein SpaN | |
| SPA2751 | -2 | 24 | -6.199650 | virulence-associated secretory protein | |
| SPA2752 | -2 | 24 | -6.056000 | virulence-associated secretory apparatus ATP | |
| SPA2753 | -1 | 27 | -7.845117 | virulence-associated secretory protein | |
| SPA2754 | -1 | 25 | -7.472499 | secretory protein | |
| SPA2755 | -1 | 27 | -7.222594 | cell invasion protein | |
| SPA2756 | 1 | 28 | -6.932021 | secretory protein (associated with virulence) |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2736 | BACYPHPHTASE | 303 | 1e-99 | Salmonella/Yersinia modular tyrosine phosphatase si... | |
>BACYPHPHTASE#Salmonella/Yersinia modular tyrosine phosphatase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2737 | PF05932 | 34 | 5e-05 | Tir chaperone protein (CesT) | |
>PF05932#Tir chaperone protein (CesT) | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2742 | BACINVASINC | 514 | 0.0 | Salmonella/Shigella invasin protein C signature. | |
>BACINVASINC#Salmonella/Shigella invasin protein C signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2743 | BACINVASINB | 835 | 0.0 | Salmonella/Shigella invasin protein B signature. | |
>BACINVASINB#Salmonella/Shigella invasin protein B signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2744 | SYCDCHAPRONE | 128 | 2e-40 | Gram-negative bacterial type III secretion SycD cha... | |
>SYCDCHAPRONE#Gram-negative bacterial type III secretion SycD | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2745 | TYPE3IMSPROT | 340 | e-118 | Type III secretion system inner membrane S protein ... | |
>TYPE3IMSPROT#Type III secretion system inner membrane S protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2746 | TYPE3IMRPROT | 188 | 2e-61 | Type III secretion system inner membrane R protein ... | |
>TYPE3IMRPROT#Type III secretion system inner membrane R protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2747 | TYPE3IMQPROT | 89 | 4e-27 | Type III secretion system inner membrane Q protein ... | |
>TYPE3IMQPROT#Type III secretion system inner membrane Q protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2748 | TYPE3IMPPROT | 303 | e-107 | Type III secretion system inner membrane P protein ... | |
>TYPE3IMPPROT#Type III secretion system inner membrane P protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2749 | TYPE3OMOPROT | 537 | 0.0 | Type III secretion system outer membrane O protein ... | |
>TYPE3OMOPROT#Type III secretion system outer membrane O protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2750 | SSPANPROTEIN | 601 | 0.0 | Salmonella invasion protein InvJ signature. | |
>SSPANPROTEIN#Salmonella invasion protein InvJ signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2751 | SSPAMPROTEIN | 167 | 2e-56 | Salmonella surface presentation of antigen gene typ... | |
>SSPAMPROTEIN#Salmonella surface presentation of antigen gene type M | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2753 | SSPAKPROTEIN | 205 | 7e-72 | Invasion protein B family signature. | |
>SSPAKPROTEIN#Invasion protein B family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2755 | INVEPROTEIN | 604 | 0.0 | Salmonella/Shigella invasion protein E (InvE) signat... | |
>INVEPROTEIN#Salmonella/Shigella invasion protein E (InvE) | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2756 | TYPE3OMGPROT | 576 | 0.0 | Type III secretion system outer membrane G protein ... | |
>TYPE3OMGPROT#Type III secretion system outer membrane G protein | |||||
| 89 | SPA2809 | SPA2816 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SPA2809 | 0 | 21 | 0.174843 | enolase | |
| SPA2810 | -1 | 13 | 0.552329 | CTP synthetase | |
| SPA2811 | 0 | 11 | 0.763117 | hypothetical protein | |
| SPA2812 | 2 | 12 | 0.398635 | fimbrial subunit | |
| SPA2813 | 1 | 13 | -1.477546 | outer membrane usher protein | |
| SPA2814 | 4 | 25 | -5.831165 | periplasmic fimbrial chaperone | |
| SPA2815 | 5 | 32 | -7.192197 | fimbrial subunit | |
| SPA2816 | 0 | 19 | -4.320321 | fimbrial subunit |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2809 | ANTHRAXTOXNA | 29 | 0.036 | Anthrax toxin LF subunit signature. | |
>ANTHRAXTOXNA#Anthrax toxin LF subunit signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2813 | PF00577 | 702 | 0.0 | Outer membrane usher protein FimD | |
>PF00577#Outer membrane usher protein FimD | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2815 | FIMBRIALPAPF | 34 | 2e-04 | Escherichia coli: P pili tip fibrillum papF protein... | |
>FIMBRIALPAPF#Escherichia coli: P pili tip fibrillum papF protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA2816 | FIMBRIALPAPF | 37 | 6e-06 | Escherichia coli: P pili tip fibrillum papF protein... | |
>FIMBRIALPAPF#Escherichia coli: P pili tip fibrillum papF protein | |||||
| 90 | SPA3252 | SPA3259 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SPA3252 | -1 | 15 | -1.873897 | Fis DNA-binding protein | |
| SPA3254 | -1 | 16 | -1.771649 | hypothetical protein | |
| SPA3255 | -1 | 16 | -1.608755 | diguanylate cyclase/phosphodiesterase | |
| SPA3256 | -1 | 18 | -2.575197 | transcriptional repressor for envCD (acrEF) | |
| SPA3257 | 0 | 17 | -1.844348 | transmembrane protein | |
| SPA3258 | -1 | 18 | -2.360843 | RND family, multidrug transport protein, | |
| SPA3259 | 0 | 21 | -2.049336 | lipoprotein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA3252 | DNABINDNGFIS | 157 | 3e-54 | DNA-binding protein FIS signature. | |
>DNABINDNGFIS#DNA-binding protein FIS signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA3256 | HTHTETR | 128 | 4e-39 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA3257 | RTXTOXIND | 43 | 2e-06 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA3258 | ACRIFLAVINRP | 1391 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA3259 | adhesinb | 29 | 0.001 | Adhesin B signature. | |
>adhesinb#Adhesin B signature. | |||||
| 91 | SPA3308 | SPA3312 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SPA3308 | 4 | 47 | -2.395251 | Type III leader peptidase | |
| SPA3309 | 6 | 52 | -2.407714 | bacterioferritin | |
| SPA3310 | 7 | 55 | -1.450607 | bacterioferritin-associated ferredoxin | |
| SPA3311 | 7 | 54 | -0.909952 | elongation factor Tu | |
| SPA3312 | 4 | 43 | -0.845562 | elongation factor G |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA3308 | PREPILNPTASE | 141 | 3e-44 | Type IV prepilin cysteine protease (C20) family sig... | |
>PREPILNPTASE#Type IV prepilin cysteine protease (C20) family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA3309 | HELNAPAPROT | 37 | 1e-05 | Helicobacter neutrophil-activating protein A family ... | |
>HELNAPAPROT#Helicobacter neutrophil-activating protein A family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA3311 | TCRTETOQM | 80 | 3e-18 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA3312 | TCRTETOQM | 616 | 0.0 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
| 92 | SPA3318 | SPA3333 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SPA3318 | -1 | 13 | -0.738158 | hypothetical protein | |
| SPA3319 | -1 | 12 | 0.555578 | FKBP-type peptidyl-prolyl isomerase | |
| SPA3320 | 1 | 13 | 2.395800 | hypothetical protein | |
| SPA3321 | 0 | 14 | 2.037905 | FKBP-type peptidyl-prolyl cis-trans isomerase | |
| SPA3322 | 0 | 15 | 1.914172 | hypothetical protein | |
| SPA3323 | 0 | 15 | 1.915027 | glutathione-regulated potassium-efflux system | |
| SPA3324 | -1 | 15 | 1.842069 | oxidoreductase | |
| SPA3325 | 0 | 17 | 1.699107 | ABC-transporter ATP-binding protein | |
| SPA3327 | -1 | 14 | -0.546767 | hypothetical protein | |
| SPA3328 | -1 | 12 | 0.549098 | hydrolase | |
| SPA3329 | -2 | 12 | 0.861719 | hypothetical protein | |
| SPA3330 | -1 | 12 | 1.085439 | phosphoribulokinase | |
| SPA3331 | -1 | 11 | 1.164842 | hypothetical protein | |
| SPA3332 | -1 | 11 | 1.169198 | cyclic AMP receptor protein,catabolite gene | |
| SPA3333 | -1 | 12 | 1.259704 | inner membrane protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA3318 | ACRIFLAVINRP | 29 | 0.020 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA3319 | INFPOTNTIATR | 128 | 2e-38 | Macrophage infectivity potentiator signature. | |
>INFPOTNTIATR#Macrophage infectivity potentiator signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA3324 | ISCHRISMTASE | 28 | 0.025 | Isochorismatase signature. | |
>ISCHRISMTASE#Isochorismatase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA3325 | PYOCINKILLER | 31 | 0.019 | Pyocin S killer protein signature. | |
>PYOCINKILLER#Pyocin S killer protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA3329 | FLGFLIH | 25 | 0.024 | Flagellar assembly protein FliH signature. | |
>FLGFLIH#Flagellar assembly protein FliH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA3330 | PF07299 | 36 | 1e-04 | Fibronectin-binding protein (FBP) | |
>PF07299#Fibronectin-binding protein (FBP) | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA3333 | YERSSTKINASE | 31 | 0.014 | Yersinia serine/threonine protein kinase signature. | |
>YERSSTKINASE#Yersinia serine/threonine protein kinase signature. | |||||
| 93 | SPA3366 | SPA3373 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SPA3366 | 0 | 22 | 3.418678 | two-component sensor kinase EnvZ | |
| SPA3367 | 1 | 24 | 3.239213 | two-component response regulator OmpR | |
| SPA3368 | -1 | 20 | 2.607453 | transcription elongation factor GreB | |
| SPA3369 | -2 | 17 | 3.029724 | transcription accessory protein | |
| SPA3370 | -2 | 14 | 2.522163 | ferrous iron transport protein | |
| SPA3371 | -2 | 14 | 2.531621 | ferrous iron transport protein B | |
| SPA3372 | -2 | 10 | 2.266966 | hypothetical protein | |
| SPA3373 | -2 | 12 | 2.979994 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA3366 | PF06580 | 34 | 0.001 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA3367 | HTHFIS | 98 | 6e-26 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA3371 | TCRTETOQM | 42 | 9e-06 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA3373 | FLGFLIH | 29 | 0.019 | Flagellar assembly protein FliH signature. | |
>FLGFLIH#Flagellar assembly protein FliH signature. | |||||
| 94 | SPA3403 | SPA3409 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SPA3403 | -2 | 16 | 2.543597 | gamma-glutamyltranspeptidase | |
| SPA3404 | -3 | 14 | 1.902685 | hypothetical protein | |
| SPA3405 | -3 | 14 | 1.830065 | glycerophosphoryl diester phosphodiesterase | |
| SPA3406 | -2 | 17 | 2.082303 | sn-Glycerol-3-phosphate transport ATP-binding | |
| SPA3407 | -2 | 18 | 1.749752 | sn-Glycerol-3-phosphate transport system | |
| SPA3408 | -2 | 21 | 2.734628 | glycerol-3-phosphate transport system permease | |
| SPA3409 | -3 | 21 | 2.736945 | glycerol-3-phosphate-binding periplasmic |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA3403 | NAFLGMOTY | 32 | 0.004 | Sodium-type flagellar protein MotY precursor signature. | |
>NAFLGMOTY#Sodium-type flagellar protein MotY precursor signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA3405 | PF04619 | 28 | 0.031 | Dr-family adhesin | |
>PF04619#Dr-family adhesin | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA3406 | PF05272 | 29 | 0.041 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA3409 | MALTOSEBP | 43 | 1e-06 | Maltose binding protein signature. | |
>MALTOSEBP#Maltose binding protein signature. | |||||
| 95 | SPA3425 | SPA3443 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SPA3425 | 1 | 14 | 3.450185 | hypothetical protein | |
| SPA3426 | 1 | 13 | 3.321035 | hypothetical protein | |
| SPA3427 | 0 | 13 | 3.703832 | heavy metal-transporting ATPase | |
| SPA3428 | 0 | 13 | 1.301227 | methyl-accepting chemotaxis citrate transducer | |
| SPA3429 | 2 | 15 | 1.490440 | hypothetical protein | |
| SPA3430 | 1 | 14 | 1.522398 | hypothetical protein | |
| SPA3431 | 0 | 15 | 2.132261 | lipoprotein | |
| SPA3432 | -2 | 15 | 3.214261 | hypothetical protein | |
| SPA3433 | -1 | 13 | 3.429254 | hypothetical protein | |
| SPA3434 | -1 | 11 | 2.651422 | hypothetical protein | |
| SPA3435 | 1 | 12 | 0.566655 | nickel responsive regulator | |
| SPA3436 | 0 | 13 | 0.017216 | ABC-transporter ATP-binding protein | |
| SPA3437 | 1 | 14 | -1.688942 | ABC transporter ATP-binding protein | |
| SPA3438 | 3 | 27 | -6.557631 | HlyD-family secretion protein | |
| SPA3439 | 7 | 35 | -9.736229 | hypothetical protein | |
| SPA3440 | 2 | 30 | -7.776086 | aminotransferase | |
| SPA3441 | 0 | 19 | -4.895486 | regulatory protein | |
| SPA3442 | 0 | 17 | -4.403514 | DNA-binding protein | |
| SPA3443 | -1 | 14 | -2.596421 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA3425 | SHIGARICIN | 27 | 0.026 | Ribosome inactivating protein family signature. | |
>SHIGARICIN#Ribosome inactivating protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA3427 | ACRIFLAVINRP | 30 | 0.039 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA3429 | PF01206 | 101 | 2e-32 | SirA family protein | |
>PF01206#SirA family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA3432 | TCRTETA | 49 | 2e-08 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA3434 | ENTSNTHTASED | 30 | 0.006 | Enterobactin synthetase component D signature. | |
>ENTSNTHTASED#Enterobactin synthetase component D signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA3436 | ABC2TRNSPORT | 47 | 3e-08 | ABC-2 type transport system membrane protein signat... | |
>ABC2TRNSPORT#ABC-2 type transport system membrane protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA3438 | RTXTOXIND | 77 | 9e-18 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA3439 | TCRTETB | 30 | 0.016 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA3443 | TCRTETA | 31 | 0.008 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| 96 | SPA3550 | SPA3557 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SPA3550 | -2 | 13 | -0.935057 | hypothetical protein | |
| SPA3551 | 0 | 19 | 1.307741 | serine acetyltransferase | |
| SPA3552 | 1 | 16 | 2.179702 | glycerol-3-phosphate dehydrogenase | |
| SPA3553 | 1 | 17 | 1.888396 | protein-export protein SecB | |
| SPA3554 | 0 | 12 | 0.936258 | glutaredoxin 3 | |
| SPA3555 | -1 | 12 | 0.931914 | hypothetical protein | |
| SPA3556 | 0 | 13 | 1.524430 | 2,3-bisphosphoglycerate-independent | |
| SPA3557 | 0 | 14 | 0.831382 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA3550 | TCRTETA | 40 | 1e-05 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA3552 | NUCEPIMERASE | 29 | 0.028 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA3553 | SECBCHAPRONE | 234 | 2e-82 | Bacterial protein-transport SecB chaperone protein ... | |
>SECBCHAPRONE#Bacterial protein-transport SecB chaperone protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA3557 | RTXTOXIND | 47 | 7e-08 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| 97 | SPA3604 | SPA3612 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SPA3604 | 3 | 19 | -4.462059 | hypothetical protein | |
| SPA3606 | 3 | 19 | -3.796576 | DNA-binding protein | |
| SPA3607 | 4 | 19 | -3.732464 | hypothetical protein | |
| SPA3608 | 2 | 13 | -1.799967 | autotransported protein | |
| SPA3609 | -1 | 16 | -2.609124 | hypothetical protein | |
| SPA3610 | -3 | 14 | -1.715501 | transcriptional regulator | |
| SPA3611 | -2 | 17 | -1.332602 | hypothetical protein | |
| SPA3612 | -2 | 16 | -0.481999 | inner membrane protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA3604 | IGASERPTASE | 35 | 2e-04 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA3608 | PERTACTIN | 119 | 1e-29 | Pertactin signature. | |
>PERTACTIN#Pertactin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA3611 | ISCHRISMTASE | 42 | 6e-07 | Isochorismatase signature. | |
>ISCHRISMTASE#Isochorismatase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA3612 | cloacin | 29 | 0.009 | Cloacin signature. | |
>cloacin#Cloacin signature. | |||||
| 98 | SPA3671 | SPA3677 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SPA3671 | -2 | 13 | 0.828235 | TorD protein | |
| SPA3672 | -2 | 12 | 1.225842 | trimethylamine-N-oxide reductase precursor | |
| SPA3673 | -2 | 12 | 0.899385 | hypothetical protein | |
| SPA3674 | -1 | 13 | 1.489018 | response regulator in multi-component regualtory | |
| SPA3675 | -2 | 10 | 1.536963 | Solute binding receptor protein | |
| SPA3676 | -1 | 11 | 1.589301 | two-component sensor protein histidine protein | |
| SPA3677 | -1 | 17 | 2.180093 | MFS family, D-galactonate transport protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA3671 | PF06872 | 29 | 0.021 | EspG protein | |
>PF06872#EspG protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA3674 | HTHFIS | 76 | 2e-18 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA3676 | HTHFIS | 55 | 9e-10 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA3677 | TCRTETA | 46 | 2e-07 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| 99 | SPA3844 | SPA3850 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SPA3844 | -2 | 13 | 1.059302 | hypothetical protein | |
| SPA3845 | 0 | 18 | 1.094432 | oxygen-independent coproporphyrinogen III | |
| SPA3846 | 0 | 17 | 0.816964 | two-component system, response regulator | |
| SPA3847 | 0 | 16 | -0.437103 | two-component system sensory histidine kinase | |
| SPA3848 | 0 | 14 | -2.073333 | glutamine synthetase | |
| SPA3849 | -1 | 14 | -3.997706 | hypothetical protein | |
| SPA3850 | -2 | 13 | -3.986960 | GTP-binding protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA3844 | SECA | 28 | 0.015 | SecA protein signature. | |
>SECA#SecA protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA3846 | HTHFIS | 597 | 0.0 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA3847 | PF06580 | 29 | 0.034 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA3850 | TCRTETOQM | 179 | 7e-51 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
| 100 | SPA4007 | SPA4022 | N ![]() | Y ![]() | Y | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SPA4007 | -1 | 15 | 2.873736 | histone like DNA-binding protein HU-alpha (NS2) | |
| SPA4008 | -1 | 17 | 3.530766 | hypothetical protein | |
| SPA4009 | -2 | 17 | 3.116450 | hypothetical protein | |
| SPA4010 | -1 | 15 | 2.145278 | two-component system sensor protein | |
| SPA4011 | -1 | 15 | 1.459161 | transcriptional regulator | |
| SPA4012 | -1 | 19 | 1.592110 | phosphoribosylglycineamide synthetase | |
| SPA4013 | -1 | 16 | 0.646779 | bifunctional | |
| SPA4019 | -1 | 12 | 0.304926 | *acetyltransferase | |
| SPA4020 | -1 | 17 | 2.143587 | homoserine O-succinyltransferase | |
| SPA4021 | -1 | 18 | 2.908684 | malate synthase A | |
| SPA4022 | -1 | 21 | 3.847271 | isocitrate lyase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA4007 | DNABINDINGHU | 120 | 1e-39 | Prokaryotic integration host factor signature. | |
>DNABINDINGHU#Prokaryotic integration host factor signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA4010 | PF06580 | 36 | 2e-04 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA4011 | HTHFIS | 518 | 0.0 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA4019 | SACTRNSFRASE | 39 | 2e-06 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA4022 | BINARYTOXINB | 32 | 0.008 | Binary toxin B family signature. | |
>BINARYTOXINB#Binary toxin B family signature. | |||||
| 101 | SPA4105 | SPA4110 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SPA4105 | -1 | 12 | -0.225606 | acetyltransferase | |
| SPA4106 | -1 | 12 | -0.847909 | hypothetical protein | |
| SPA4107 | -1 | 13 | -0.215081 | hypothetical protein | |
| SPA4108 | -2 | 11 | -1.079656 | ProP | |
| SPA4109 | -1 | 12 | -0.614789 | two-component sensor kinase | |
| SPA4110 | -1 | 12 | -1.050936 | two-component response regulator |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA4105 | SACTRNSFRASE | 33 | 2e-04 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA4108 | TCRTETA | 44 | 9e-07 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA4109 | PF06580 | 38 | 5e-05 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA4110 | HTHFIS | 92 | 8e-24 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 102 | SPA4175 | SPA4181 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SPA4175 | -2 | 13 | 2.923577 | N-acetylmuramoyl-L-alanine amidase | |
| SPA4176 | 0 | 16 | 2.273677 | DNA mismatch repair protein | |
| SPA4177 | 1 | 18 | 1.204986 | tRNA delta-2-isopentenylpyrophosphate (IPP) | |
| SPA4178 | 4 | 23 | 1.028415 | host factor-I protein | |
| SPA4179 | 4 | 21 | 0.888767 | HflX protein, putative GTP-binding protein | |
| SPA4180 | 3 | 20 | 1.172013 | HflK protein | |
| SPA4181 | 4 | 18 | 0.990706 | HflC protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA4175 | PF03544 | 31 | 0.007 | Gram-negative bacterial tonB protein | |
>PF03544#Gram-negative bacterial tonB protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA4176 | ALARACEMASE | 30 | 0.027 | Alanine racemase signature. | |
>ALARACEMASE#Alanine racemase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA4179 | SECA | 33 | 0.002 | SecA protein signature. | |
>SECA#SecA protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA4181 | PYOCINKILLER | 29 | 0.030 | Pyocin S killer protein signature. | |
>PYOCINKILLER#Pyocin S killer protein signature. | |||||
| 103 | SPA4372 | SPA4378 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SPA4372 | 0 | 13 | 0.907686 | ribosomal-protein-alanine acetyltransferase | |
| SPA4373 | -1 | 13 | 1.752440 | hypothetical protein | |
| SPA4374 | -2 | 14 | 2.206160 | peptide chain release factor 3 | |
| SPA4375 | -1 | 11 | 2.041603 | hypothetical protein | |
| SPA4376 | -1 | 11 | 2.542895 | hypothetical protein | |
| SPA4377 | -1 | 12 | 2.605578 | hypothetical protein | |
| SPA4378 | -2 | 16 | 2.698139 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA4372 | SACTRNSFRASE | 48 | 8e-10 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA4374 | TCRTETOQM | 213 | 6e-64 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA4376 | CHANLCOLICIN | 27 | 0.004 | Channel forming colicin signature. | |
>CHANLCOLICIN#Channel forming colicin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SPA4378 | UREASE | 29 | 0.022 | Urea amidohydrolase (urease) protein signature. | |
>UREASE#Urea amidohydrolase (urease) protein signature. | |||||