| S.No | Start | End | Bias | Virulence | Insertion elements | Prediction |
| 1 | PputGB1_0001 | PputGB1_0064 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PputGB1_0001 | 2 | 17 | -4.144988 | ribonuclease P | |
| PputGB1_0002 | 2 | 18 | -4.390177 | 50S ribosomal protein L34 | |
| PputGB1_0003 | 3 | 21 | -5.468648 | chromosomal replication initiation protein | |
| PputGB1_0004 | 4 | 24 | -6.520252 | DNA polymerase III subunit beta | |
| PputGB1_0005 | 4 | 31 | -7.116897 | recombination protein F | |
| PputGB1_0006 | 5 | 32 | -7.546904 | DNA gyrase subunit B | |
| PputGB1_0007 | 7 | 45 | -8.933326 | hypothetical protein | |
| PputGB1_0008 | 6 | 46 | -8.910214 | integrase catalytic subunit | |
| PputGB1_0009 | 3 | 47 | -8.574825 | AAA ATPase | |
| PputGB1_0010 | 1 | 43 | -7.253321 | hypothetical protein | |
| PputGB1_0011 | 1 | 41 | -7.188590 | hypothetical protein | |
| PputGB1_0012 | 3 | 32 | -6.152807 | hypothetical protein | |
| PputGB1_0013 | 3 | 30 | -5.486910 | hypothetical protein | |
| PputGB1_0014 | 4 | 30 | -5.585670 | hypothetical protein | |
| PputGB1_0015 | 4 | 30 | -5.657247 | copper resistance B | |
| PputGB1_0016 | 5 | 33 | -5.981289 | hypothetical protein | |
| PputGB1_0017 | 3 | 36 | -5.288217 | CopA family copper resistance protein | |
| PputGB1_0018 | 2 | 42 | -4.832336 | hypothetical protein | |
| PputGB1_0019 | 2 | 39 | -4.677112 | two component heavy metal response | |
| PputGB1_0020 | 2 | 39 | -4.583689 | heavy metal sensor signal transduction histidine | |
| PputGB1_0021 | 1 | 39 | -4.347522 | hypothetical protein | |
| PputGB1_0022 | 1 | 38 | -4.375300 | outer membrane efflux protein | |
| PputGB1_0023 | 2 | 35 | -4.620531 | RND family efflux transporter MFP subunit | |
| PputGB1_0024 | 2 | 33 | -4.876370 | CzcA family heavy metal efflux protein | |
| PputGB1_0025 | 2 | 34 | -5.469633 | hypothetical protein | |
| PputGB1_0026 | 2 | 29 | -3.912474 | isoprenylcysteine carboxyl methyltransferase | |
| PputGB1_0027 | 3 | 29 | -3.221329 | hypothetical protein | |
| PputGB1_0028 | 3 | 32 | -4.110984 | hypothetical protein | |
| PputGB1_0029 | 2 | 34 | -4.384198 | hypothetical protein | |
| PputGB1_0030 | 2 | 34 | -4.739403 | heavy metal transport/detoxification protein | |
| PputGB1_0031 | 3 | 33 | -5.480745 | copper-translocating P-type ATPase | |
| PputGB1_0032 | 4 | 40 | -8.255651 | putative transcriptional regulator | |
| PputGB1_0033 | 4 | 41 | -8.940921 | hypothetical protein | |
| PputGB1_0034 | 3 | 34 | -8.520861 | hypothetical protein | |
| PputGB1_0035 | 2 | 32 | -7.474827 | hypothetical protein | |
| PputGB1_0036 | 3 | 32 | -7.506561 | hypothetical protein | |
| PputGB1_0037 | 2 | 32 | -7.633154 | hypothetical protein | |
| PputGB1_0038 | 2 | 31 | -7.579648 | hypothetical protein | |
| PputGB1_0039 | 2 | 29 | -7.077115 | hypothetical protein | |
| PputGB1_0040 | 5 | 28 | -6.482767 | cation diffusion facilitator family transporter | |
| PputGB1_0041 | 4 | 29 | -7.418293 | hypothetical protein | |
| PputGB1_0042 | 3 | 27 | -6.377987 | hypothetical protein | |
| PputGB1_0043 | 4 | 26 | -5.704220 | two component heavy metal response | |
| PputGB1_0044 | 3 | 29 | -6.031939 | heavy metal sensor signal transduction histidine | |
| PputGB1_0045 | 2 | 33 | -7.153493 | hypothetical protein | |
| PputGB1_0046 | 0 | 28 | -6.964925 | hypothetical protein | |
| PputGB1_0047 | 0 | 27 | -6.652178 | glycosyl transferase family protein | |
| PputGB1_0048 | 0 | 30 | -7.015204 | ribonuclease III | |
| PputGB1_0049 | 2 | 33 | -7.441185 | GtrA family protein | |
| PputGB1_0050 | 0 | 31 | -5.849595 | LysR family transcriptional regulator | |
| PputGB1_0051 | 0 | 29 | -5.318279 | phosphate-selective porin O and P | |
| PputGB1_0052 | 0 | 27 | -5.110978 | hypothetical protein | |
| PputGB1_0053 | 0 | 27 | -4.718216 | hypothetical protein | |
| PputGB1_0054 | 0 | 27 | -4.349194 | hypothetical protein | |
| PputGB1_0055 | 1 | 25 | -4.572549 | heavy metal translocating P-type ATPase | |
| PputGB1_0056 | 2 | 26 | -5.220833 | hypothetical protein | |
| PputGB1_0057 | 2 | 27 | -5.270659 | CzcA family heavy metal efflux protein | |
| PputGB1_0058 | 3 | 33 | -6.743618 | RND family efflux transporter MFP subunit | |
| PputGB1_0059 | 2 | 40 | -8.180225 | outer membrane efflux protein | |
| PputGB1_0060 | 4 | 42 | -9.939942 | outer membrane porin | |
| PputGB1_0061 | 6 | 51 | -10.423759 | two component heavy metal response | |
| PputGB1_0062 | 3 | 42 | -7.321643 | hypothetical protein | |
| PputGB1_0063 | 1 | 33 | -5.837879 | hypothetical protein | |
| PputGB1_0064 | 0 | 27 | -3.556592 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_0009 | PF05272 | 29 | 0.035 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_0015 | CHLAMIDIAOMP | 31 | 0.007 | Chlamydia major outer membrane protein signature. | |
>CHLAMIDIAOMP#Chlamydia major outer membrane protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_0017 | ICENUCLEATIN | 43 | 4e-06 | Ice nucleation protein signature. | |
>ICENUCLEATIN#Ice nucleation protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_0019 | HTHFIS | 92 | 7e-24 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_0020 | PF06580 | 29 | 0.027 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_0022 | RTXTOXIND | 32 | 0.005 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_0023 | RTXTOXIND | 47 | 1e-07 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_0024 | ACRIFLAVINRP | 669 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_0043 | HTHFIS | 79 | 3e-19 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_0057 | ACRIFLAVINRP | 807 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_0058 | RTXTOXIND | 47 | 8e-08 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_0059 | IGASERPTASE | 32 | 0.008 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_0061 | HTHFIS | 77 | 1e-18 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 2 | PputGB1_0113 | PputGB1_0121 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PputGB1_0113 | 2 | 11 | -0.374531 | radical SAM domain-containing protein | |
| PputGB1_0114 | 2 | 12 | -0.445484 | carbonate dehydratase | |
| PputGB1_0115 | 2 | 14 | -0.738153 | sulfate transporter | |
| PputGB1_0116 | 4 | 14 | -1.746279 | hypothetical protein | |
| PputGB1_0117 | 3 | 14 | -0.915594 | cytochrome c oxidase subunit II | |
| PputGB1_0118 | 1 | 14 | -0.383447 | cytochrome c oxidase subunit I | |
| PputGB1_0119 | 0 | 11 | 0.966325 | cytochrome C oxidase assembly protein | |
| PputGB1_0120 | 2 | 10 | 1.236014 | cytochrome c oxidase subunit III | |
| PputGB1_0121 | 3 | 12 | 1.865964 | hypothetical protein |
| 3 | PputGB1_0181 | PputGB1_0195 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PputGB1_0181 | 9 | 22 | -1.819500 | GntR family transcriptional regulator | |
| PputGB1_0182 | 9 | 22 | -1.838748 | hypothetical protein | |
| PputGB1_0183 | 9 | 22 | -1.723765 | diguanylate cyclase/phosphodiesterase | |
| PputGB1_0184 | 10 | 22 | -1.895688 | HlyD family type I secretion membrane fusion | |
| PputGB1_0185 | 10 | 22 | -1.896084 | type I secretion system ATPase | |
| PputGB1_0186 | 11 | 22 | -2.167708 | hypothetical protein | |
| PputGB1_0187 | -2 | 10 | -1.386347 | hypothetical protein | |
| PputGB1_0188 | -1 | 11 | -2.560896 | taurine dioxygenase | |
| PputGB1_0189 | 1 | 19 | -4.105937 | ABC transporter substrate-binding protein | |
| PputGB1_0190 | 2 | 33 | -6.582621 | ABC transporter-like protein | |
| PputGB1_0191 | 2 | 38 | -6.943284 | binding-protein-dependent transport system inner | |
| PputGB1_0192 | 2 | 38 | -6.043806 | Hcp1 family type VI secretion system effector | |
| PputGB1_0195 | 3 | 37 | -4.433250 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_0184 | RTXTOXIND | 318 | e-106 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_0186 | CABNDNGRPT | 93 | 5e-21 | NodO calcium binding signature. | |
>CABNDNGRPT#NodO calcium binding signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_0188 | PF06872 | 29 | 0.032 | EspG protein | |
>PF06872#EspG protein | |||||
| 4 | PputGB1_0209 | PputGB1_0218 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PputGB1_0209 | 2 | 12 | 2.921741 | argininosuccinate lyase | |
| PputGB1_0210 | 5 | 10 | 3.217417 | LytTR family two component transcriptional | |
| PputGB1_0211 | 7 | 11 | 2.977560 | porphobilinogen deaminase | |
| PputGB1_0212 | 9 | 14 | 2.511674 | uroporphyrinogen-III synthase | |
| PputGB1_0213 | 13 | 15 | 1.902340 | hypothetical protein | |
| PputGB1_0214 | 14 | 18 | 1.929786 | HemY domain-containing protein | |
| PputGB1_0215 | 10 | 16 | 1.280604 | disulfide bond formation protein DsbB | |
| PputGB1_0216 | 10 | 14 | 1.186039 | anti-RNA polymerase sigma 70 factor | |
| PputGB1_0217 | 8 | 15 | 1.290874 | FKBP-type peptidylprolyl isomerase | |
| PputGB1_0218 | 6 | 15 | 1.237617 | alginate regulatory protein AlgP |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_0210 | HTHFIS | 81 | 8e-20 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_0217 | INFPOTNTIATR | 118 | 3e-35 | Macrophage infectivity potentiator signature. | |
>INFPOTNTIATR#Macrophage infectivity potentiator signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_0218 | IGASERPTASE | 39 | 4e-05 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| 5 | PputGB1_0345 | PputGB1_0355 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PputGB1_0345 | 2 | 23 | 1.072849 | serine hydroxymethyltransferase | |
| PputGB1_0346 | 2 | 20 | 0.790859 | sarcosine oxidase subunit beta | |
| PputGB1_0347 | 0 | 15 | -0.836939 | sarcosine oxidase subunit delta | |
| PputGB1_0348 | 0 | 15 | -2.631534 | sarcosine oxidase subunit alpha | |
| PputGB1_0349 | -1 | 20 | -4.733754 | sarcosine oxidase subunit gamma | |
| PputGB1_0350 | -1 | 19 | -4.182952 | formyltetrahydrofolate deformylase | |
| PputGB1_0351 | -1 | 19 | -4.496568 | formaldehyde dehydrogenase | |
| PputGB1_0352 | 0 | 22 | -5.267035 | hypothetical protein | |
| PputGB1_0355 | -1 | 16 | -3.195382 | hypothetical protein |
| 6 | PputGB1_0383 | PputGB1_0391 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PputGB1_0383 | -1 | 14 | -4.212464 | response regulator receiver protein | |
| PputGB1_0384 | -1 | 12 | -3.298654 | malate synthase G | |
| PputGB1_0385 | -2 | 22 | -4.101205 | amino acid-binding ACT domain-containing | |
| PputGB1_0386 | -1 | 24 | -4.080540 | transporter DMT superfamily protein | |
| PputGB1_0387 | -2 | 21 | -4.285813 | hypothetical protein | |
| PputGB1_0388 | -2 | 16 | -1.514336 | hypothetical protein | |
| PputGB1_0389 | 0 | 9 | 1.838070 | serine/threonine protein kinase | |
| PputGB1_0390 | 3 | 11 | 1.850780 | ModE family transcriptional regulator | |
| PputGB1_0391 | 2 | 12 | 1.393085 | phosphoribosyltransferase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_0383 | HTHFIS | 86 | 4e-22 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 7 | PputGB1_0410 | PputGB1_0430 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PputGB1_0410 | 1 | 17 | -4.083732 | nitrilase/cyanide hydratase and apolipoprotein | |
| PputGB1_0411 | 2 | 20 | -4.759770 | amine oxidase | |
| PputGB1_0412 | 0 | 18 | -3.348450 | AsnC family transcriptional regulator | |
| PputGB1_0413 | 1 | 15 | -3.415738 | hypothetical protein | |
| PputGB1_0414 | 1 | 15 | -2.478239 | hypothetical protein | |
| PputGB1_0415 | 2 | 17 | -2.216713 | hypothetical protein | |
| PputGB1_0416 | 2 | 16 | -0.481228 | phage integrase family site specific | |
| PputGB1_0417 | 1 | 16 | -0.202662 | *PAS/PAC sensor-containing diguanylate | |
| PputGB1_0418 | 2 | 13 | -0.442468 | RNA polymerase sigma factor RpoD | |
| PputGB1_0419 | 1 | 10 | 0.389838 | DNA primase | |
| PputGB1_0420 | 1 | 14 | 0.194918 | 30S ribosomal protein S21 | |
| PputGB1_0421 | -2 | 8 | -0.659260 | putative DNA-binding/iron metalloprotein/AP | |
| PputGB1_0422 | -1 | 8 | -1.131943 | putative glycerol-3-phosphate acyltransferase | |
| PputGB1_0423 | 2 | 8 | -2.911260 | dihydroneopterin aldolase | |
| PputGB1_0424 | 2 | 9 | -2.846529 | 2-amino-4-hydroxy-6- | |
| PputGB1_0425 | 2 | 13 | -2.332786 | multifunctional tRNA nucleotidyl | |
| PputGB1_0426 | 3 | 17 | -2.864807 | SpoVR family protein | |
| PputGB1_0427 | 2 | 19 | -1.924066 | hypothetical protein | |
| PputGB1_0428 | 0 | 17 | -0.881644 | putative serine protein kinase PrkA | |
| PputGB1_0429 | -2 | 20 | 1.545427 | thiosulfate sulfurtransferase | |
| PputGB1_0430 | 2 | 16 | -0.299365 | diadenosine tetraphosphatase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_0412 | HTHFIS | 30 | 0.003 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 8 | PputGB1_0676 | PputGB1_0690 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PputGB1_0676 | 3 | 35 | -4.872551 | zinc-binding protein | |
| PputGB1_0677 | 4 | 37 | -5.221715 | dephospho-CoA kinase | |
| PputGB1_0678 | 5 | 48 | -8.060290 | prepilin peptidase | |
| PputGB1_0680 | 6 | 56 | -10.017079 | fimbrial protein pilin | |
| PputGB1_0681 | 5 | 58 | -10.192862 | *integrase family protein | |
| PputGB1_0682 | 4 | 59 | -9.164297 | hypothetical protein | |
| PputGB1_0683 | 2 | 58 | -7.897508 | phage transcriptional regulator AlpA | |
| PputGB1_0684 | 1 | 55 | -8.154616 | hypothetical protein | |
| PputGB1_0685 | 0 | 50 | -6.684913 | hypothetical protein | |
| PputGB1_0686 | 0 | 47 | -5.684817 | phage integrase family protein | |
| PputGB1_0687 | 0 | 35 | -5.361913 | hypothetical protein | |
| PputGB1_0688 | 2 | 16 | -3.934675 | hypothetical protein | |
| PputGB1_0689 | 2 | 15 | -2.997705 | hypothetical protein | |
| PputGB1_0690 | 2 | 14 | -2.344336 | ECF subfamily RNA polymerase sigma-24 factor |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_0678 | PREPILNPTASE | 330 | e-116 | Type IV prepilin cysteine protease (C20) family sig... | |
>PREPILNPTASE#Type IV prepilin cysteine protease (C20) family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_0680 | BCTERIALGSPG | 56 | 5e-13 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
| 9 | PputGB1_0713 | PputGB1_0725 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PputGB1_0713 | 2 | 17 | -2.874393 | hypothetical protein | |
| PputGB1_0714 | 2 | 18 | -1.926222 | hypothetical protein | |
| PputGB1_0715 | 1 | 21 | -1.720812 | hypothetical protein | |
| PputGB1_0716 | 1 | 22 | -2.257517 | FKBP-type peptidylprolyl isomerase | |
| PputGB1_0717 | 4 | 20 | -2.020853 | hypothetical protein | |
| PputGB1_0718 | 3 | 21 | -0.026116 | alkylphosphonate utilization operon protein | |
| PputGB1_0719 | 2 | 18 | 0.132911 | polyprenyl synthetase | |
| PputGB1_0720 | 2 | 20 | 0.350553 | 50S ribosomal protein L21 | |
| PputGB1_0721 | 2 | 19 | 0.777926 | 50S ribosomal protein L27 | |
| PputGB1_0722 | 2 | 20 | 1.523707 | GTPase ObgE | |
| PputGB1_0723 | 1 | 18 | 2.105546 | gamma-glutamyl kinase | |
| PputGB1_0724 | 2 | 18 | 1.186604 | CreA family protein | |
| PputGB1_0725 | 2 | 17 | 1.278993 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_0716 | INFPOTNTIATR | 166 | 5e-54 | Macrophage infectivity potentiator signature. | |
>INFPOTNTIATR#Macrophage infectivity potentiator signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_0722 | PF07201 | 29 | 0.023 | Hypersensitivity response secretion protein HrpJ | |
>PF07201#Hypersensitivity response secretion protein HrpJ | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_0723 | CARBMTKINASE | 43 | 9e-07 | Bacterial carbamate kinase signature. | |
>CARBMTKINASE#Bacterial carbamate kinase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_0725 | CHANLCOLICIN | 39 | 9e-05 | Channel forming colicin signature. | |
>CHANLCOLICIN#Channel forming colicin signature. | |||||
| 10 | PputGB1_0758 | PputGB1_0770 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PputGB1_0758 | -1 | 21 | -3.157863 | anti-FecI sigma factor FecR | |
| PputGB1_0759 | -1 | 20 | -3.639557 | TonB-dependent siderophore receptor | |
| PputGB1_0760 | 1 | 25 | -4.905665 | hypothetical protein | |
| PputGB1_0761 | 2 | 22 | -4.605990 | hypothetical protein | |
| PputGB1_0762 | 1 | 20 | -3.880836 | hypothetical protein | |
| PputGB1_0763 | 2 | 22 | -2.144803 | GTP-dependent nucleic acid-binding protein EngD | |
| PputGB1_0764 | 1 | 23 | -0.620517 | peptidyl-tRNA hydrolase | |
| PputGB1_0765 | 2 | 24 | -1.860852 | 50S ribosomal protein L25/general stress protein | |
| PputGB1_0766 | 1 | 21 | -2.913254 | ribose-phosphate pyrophosphokinase | |
| PputGB1_0767 | 3 | 23 | -3.221825 | *4-diphosphocytidyl-2-C-methyl-D-erythritol | |
| PputGB1_0768 | 3 | 19 | -2.123560 | outer membrane lipoprotein LolB | |
| PputGB1_0769 | 3 | 18 | -2.438265 | hypothetical protein | |
| PputGB1_0770 | 2 | 17 | -2.738352 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_0761 | PF01540 | 34 | 0.002 | Adhesin lipoprotein | |
>PF01540#Adhesin lipoprotein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_0762 | RTXTOXIND | 31 | 0.007 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_0769 | SYCDCHAPRONE | 34 | 0.001 | Gram-negative bacterial type III secretion SycD cha... | |
>SYCDCHAPRONE#Gram-negative bacterial type III secretion SycD | |||||
| 11 | PputGB1_0821 | PputGB1_0827 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PputGB1_0821 | 3 | 13 | 1.660320 | nicotinate-nucleotide pyrophosphorylase | |
| PputGB1_0822 | 3 | 12 | 2.885301 | hypothetical protein | |
| PputGB1_0823 | 2 | 13 | 3.398762 | N-acetyl-anhydromuranmyl-L-alanine amidase | |
| PputGB1_0824 | 2 | 12 | 3.431982 | signaling modulator of AmpD, AmpE | |
| PputGB1_0825 | 2 | 11 | 3.467946 | TatD family hydrolase | |
| PputGB1_0826 | 2 | 11 | 3.253660 | DNA-binding transcriptional regulator FruR | |
| PputGB1_0827 | 1 | 10 | 3.234986 | phosphoenolpyruvate-protein phosphotransferase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_0827 | PHPHTRNFRASE | 577 | 0.0 | Phosphoenolpyruvate-protein phosphotransferase sign... | |
>PHPHTRNFRASE#Phosphoenolpyruvate-protein phosphotransferase | |||||
| 12 | PputGB1_0839 | PputGB1_0850 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PputGB1_0839 | -1 | 16 | 3.215091 | hypothetical protein | |
| PputGB1_0840 | 5 | 13 | 3.860180 | hypothetical protein | |
| PputGB1_0841 | 4 | 13 | 3.946572 | response regulator receiver modulated CheW | |
| PputGB1_0842 | 4 | 13 | 3.846379 | HlyD family type I secretion membrane fusion | |
| PputGB1_0843 | 5 | 12 | 3.855637 | type I secretion system ATPase | |
| PputGB1_0844 | 5 | 13 | 3.357741 | TolC family type I secretion outer membrane | |
| PputGB1_0845 | 5 | 13 | 2.620041 | hypothetical protein | |
| PputGB1_0846 | -1 | 14 | -1.444492 | anaerobic nitric oxide reductase transcriptional | |
| PputGB1_0847 | 0 | 19 | -3.411636 | nitric oxide dioxygenase | |
| PputGB1_0848 | 1 | 21 | -3.797008 | disulfide bond formation protein B | |
| PputGB1_0849 | 2 | 22 | -3.472342 | ubiquinol oxidase subunit II | |
| PputGB1_0850 | 2 | 18 | -2.765597 | cytochrome o ubiquinol oxidase subunit I |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_0841 | HTHFIS | 59 | 7e-12 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_0842 | RTXTOXIND | 261 | 3e-85 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_0845 | RTXTOXINA | 50 | 3e-07 | Gram-negative bacterial RTX toxin determinant A family... | |
>RTXTOXINA#Gram-negative bacterial RTX toxin determinant A family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_0846 | HTHFIS | 382 | e-130 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 13 | PputGB1_0882 | PputGB1_0896 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PputGB1_0882 | 2 | 17 | -0.807695 | RNA methyltransferase | |
| PputGB1_0883 | 2 | 19 | -0.865439 | serine O-acetyltransferase | |
| PputGB1_0884 | 2 | 18 | 0.083103 | BadM/Rrf2 family transcriptional regulator | |
| PputGB1_0885 | 3 | 19 | -0.003938 | cysteine desulfurase | |
| PputGB1_0886 | 2 | 16 | -0.012619 | scaffold protein | |
| PputGB1_0887 | 3 | 17 | -0.351010 | iron-sulfur cluster assembly protein IscA | |
| PputGB1_0888 | 2 | 18 | -0.850231 | co-chaperone HscB | |
| PputGB1_0889 | 1 | 17 | -0.922523 | chaperone protein HscA | |
| PputGB1_0890 | 2 | 17 | -0.987109 | ferredoxin, 2Fe-2S type, ISC system | |
| PputGB1_0891 | 1 | 17 | -0.750231 | FeS assembly protein IscX | |
| PputGB1_0892 | 1 | 15 | -0.257511 | nucleoside diphosphate kinase | |
| PputGB1_0893 | 1 | 12 | 0.396386 | radical SAM protein | |
| PputGB1_0894 | 1 | 12 | 1.130133 | type IV pilus biogenesis/stability protein PilW | |
| PputGB1_0895 | 1 | 17 | 0.800238 | XRE family transcriptional regulator | |
| PputGB1_0896 | 2 | 17 | 0.103207 | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_0889 | SHAPEPROTEIN | 106 | 3e-27 | Bacterial cell shape determinant MreB/Mbl protein s... | |
>SHAPEPROTEIN#Bacterial cell shape determinant MreB/Mbl protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_0895 | IGASERPTASE | 32 | 0.003 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| 14 | PputGB1_1037 | PputGB1_1066 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PputGB1_1037 | 1 | 11 | 3.333014 | twin-arginine translocation protein subunit | |
| PputGB1_1038 | 0 | 10 | 2.661763 | twin arginine-targeting protein translocase | |
| PputGB1_1039 | 0 | 11 | 2.901379 | general secretion pathway protein K | |
| PputGB1_1040 | 0 | 12 | 3.164974 | hypothetical protein | |
| PputGB1_1041 | 2 | 13 | 3.450932 | lipoprotein UxpA | |
| PputGB1_1042 | 2 | 12 | 3.147430 | type II secretion protein C | |
| PputGB1_1043 | 2 | 13 | 2.908727 | general secretion pathway protein D | |
| PputGB1_1044 | 5 | 13 | 3.949665 | type II secretion system protein E | |
| PputGB1_1045 | 6 | 12 | 3.923259 | general secretion pathway protein F | |
| PputGB1_1046 | 6 | 14 | 3.850337 | general secretion pathway protein G | |
| PputGB1_1047 | 9 | 19 | 4.313580 | general secretion pathway protein H | |
| PputGB1_1048 | 4 | 14 | 2.250120 | type II secretion system protein I/J | |
| PputGB1_1049 | 2 | 13 | 1.970452 | type II secretion system protein J | |
| PputGB1_1050 | 1 | 13 | 1.588278 | general secretion pathway protein L | |
| PputGB1_1051 | -1 | 14 | 0.966640 | type II secretion system protein M | |
| PputGB1_1052 | -2 | 13 | 0.551116 | type II secretion system protein N | |
| PputGB1_1053 | -3 | 13 | 0.209246 | filamentous hemagglutinin outer membrane | |
| PputGB1_1056 | 3 | 14 | -1.262168 | hypothetical protein | |
| PputGB1_1057 | 3 | 13 | 0.007109 | NUDIX hydrolase | |
| PputGB1_1058 | -1 | 11 | 0.507572 | NUDIX hydrolase | |
| PputGB1_1059 | -3 | 12 | 0.937961 | transferase | |
| PputGB1_1060 | -2 | 13 | 1.144178 | hypothetical protein | |
| PputGB1_1061 | -3 | 15 | 0.944556 | hypothetical protein | |
| PputGB1_1062 | -2 | 16 | 0.821486 | phosphoribosylglycinamide formyltransferase 2 | |
| PputGB1_1063 | -1 | 15 | -0.114854 | major facilitator superfamily metabolite/H(+) | |
| PputGB1_1064 | 0 | 13 | -1.215445 | transporter-associated protein | |
| PputGB1_1065 | 2 | 16 | -2.081930 | cytochrome c assembly protein | |
| PputGB1_1066 | 4 | 15 | -2.254218 | signal recognition particle protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_1037 | TATBPROTEIN | 74 | 3e-20 | Bacterial sec-independent translocation TatB protein... | |
>TATBPROTEIN#Bacterial sec-independent translocation TatB protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_1038 | TATBPROTEIN | 33 | 5e-05 | Bacterial sec-independent translocation TatB protein... | |
>TATBPROTEIN#Bacterial sec-independent translocation TatB protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_1043 | BCTERIALGSPD | 474 | e-163 | Bacterial general secretion pathway protein D signa... | |
>BCTERIALGSPD#Bacterial general secretion pathway protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_1045 | BCTERIALGSPF | 452 | e-161 | Bacterial general secretion pathway protein F signa... | |
>BCTERIALGSPF#Bacterial general secretion pathway protein F | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_1046 | BCTERIALGSPG | 218 | 7e-77 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_1047 | BCTERIALGSPH | 42 | 9e-08 | Bacterial general secretion pathway protein H signa... | |
>BCTERIALGSPH#Bacterial general secretion pathway protein H | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_1048 | BCTERIALGSPG | 29 | 0.002 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_1053 | PF05860 | 85 | 1e-21 | haemagglutination activity domain. | |
>PF05860#haemagglutination activity domain. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_1063 | TCRTETA | 36 | 3e-04 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| 15 | PputGB1_1176 | PputGB1_1196 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PputGB1_1176 | 1 | 17 | -3.668363 | peptidase M23B | |
| PputGB1_1177 | 1 | 16 | -4.019939 | RNA polymerase sigma factor RpoS | |
| PputGB1_1178 | 1 | 19 | -4.043212 | 4Fe-4S ferredoxin | |
| PputGB1_1179 | 1 | 20 | -3.872138 | DNA mismatch repair protein MutS | |
| PputGB1_1180 | 2 | 35 | -5.494272 | hypothetical protein | |
| PputGB1_1181 | 1 | 30 | -3.162827 | integrase family protein | |
| PputGB1_1182 | 0 | 27 | -1.728997 | putative phage excisionase | |
| PputGB1_1183 | 1 | 26 | -2.537633 | hypothetical protein | |
| PputGB1_1184 | 0 | 25 | -2.689054 | hypothetical protein | |
| PputGB1_1185 | 0 | 26 | -2.840281 | C-5 cytosine-specific DNA methylase | |
| PputGB1_1186 | 2 | 26 | -3.534602 | hypothetical protein | |
| PputGB1_1187 | 2 | 28 | -2.911412 | transcriptional regulator PrtN | |
| PputGB1_1188 | 2 | 28 | -2.423128 | putative phage repressor | |
| PputGB1_1189 | 1 | 28 | -1.694473 | hypothetical protein | |
| PputGB1_1190 | 0 | 25 | -0.705594 | hypothetical protein | |
| PputGB1_1191 | 1 | 24 | -0.585360 | bifunctional DNA primase/polymerase | |
| PputGB1_1192 | 2 | 22 | 0.894477 | hypothetical protein | |
| PputGB1_1193 | 1 | 22 | 0.799031 | pyocin R2_PP, holin | |
| PputGB1_1194 | 1 | 21 | 0.747298 | hypothetical protein | |
| PputGB1_1195 | 1 | 20 | 0.495410 | terminase GpA | |
| PputGB1_1196 | 2 | 22 | 0.003207 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_1176 | RTXTOXIND | 35 | 2e-04 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_1195 | TONBPROTEIN | 37 | 2e-04 | Gram-negative bacterial tonB protein signature. | |
>TONBPROTEIN#Gram-negative bacterial tonB protein signature. | |||||
| 16 | PputGB1_1208 | PputGB1_1227 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PputGB1_1208 | 2 | 21 | 1.094799 | phage tail protein I | |
| PputGB1_1209 | 2 | 21 | -0.132971 | putative pyocin R2_PP, tail fiber protein | |
| PputGB1_1210 | 0 | 19 | 0.496545 | hypothetical protein | |
| PputGB1_1211 | -1 | 19 | 0.412928 | hypothetical protein | |
| PputGB1_1212 | -1 | 20 | 0.142388 | tail sheath protein | |
| PputGB1_1213 | 0 | 22 | -0.189200 | phage major tail tube protein | |
| PputGB1_1214 | -1 | 24 | -0.182010 | hypothetical protein | |
| PputGB1_1215 | -1 | 25 | -0.144096 | TP901 family phage tail tape measure protein | |
| PputGB1_1216 | 1 | 24 | -2.122536 | P2 GpU family protein | |
| PputGB1_1217 | 1 | 28 | -3.123288 | tail X family protein | |
| PputGB1_1218 | 1 | 30 | -3.633324 | late control D family protein | |
| PputGB1_1219 | 2 | 39 | -5.324305 | glycoside hydrolase | |
| PputGB1_1220 | 3 | 39 | -5.250506 | phage protein | |
| PputGB1_1221 | 6 | 37 | -5.486227 | D12 class N6 adenine-specific DNA | |
| PputGB1_1222 | 9 | 42 | -5.185517 | hypothetical protein | |
| PputGB1_1223 | 6 | 25 | -2.520978 | hypothetical protein | |
| PputGB1_1225 | 3 | 21 | -0.817280 | hypothetical protein | |
| PputGB1_1226 | 1 | 14 | -0.320719 | hypothetical protein | |
| PputGB1_1227 | 3 | 16 | -0.105731 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_1215 | IGASERPTASE | 34 | 0.005 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| 17 | PputGB1_1271 | PputGB1_1288 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PputGB1_1271 | 1 | 13 | 3.532506 | cob(I)yrinic acid a,c-diamide | |
| PputGB1_1272 | 2 | 13 | 3.954827 | cobyrinic acid a,c-diamide synthase | |
| PputGB1_1273 | 3 | 12 | 4.043599 | cob(II)yrinic acid a,c-diamide reductase | |
| PputGB1_1274 | 3 | 13 | 4.353671 | cobalamin biosynthesis protein | |
| PputGB1_1275 | 4 | 13 | 4.009614 | threonine-phosphate decarboxylase | |
| PputGB1_1276 | 4 | 16 | 3.422076 | cobyric acid synthase | |
| PputGB1_1277 | 4 | 17 | 3.636871 | adenosylcobinamide | |
| PputGB1_1278 | 4 | 21 | 3.481435 | nicotinate-nucleotide--dimethylbenzimidazole | |
| PputGB1_1279 | 4 | 25 | 1.593038 | alpha-ribazole phosphatase | |
| PputGB1_1280 | 4 | 26 | 0.482552 | cobalamin synthase | |
| PputGB1_1281 | 3 | 19 | -0.115516 | MarR family transcriptional regulator | |
| PputGB1_1282 | 2 | 14 | -1.079911 | major facilitator superfamily transporter | |
| PputGB1_1283 | 0 | 16 | -2.086100 | hypothetical protein | |
| PputGB1_1284 | -1 | 15 | -2.215794 | glutathione peroxidase | |
| PputGB1_1285 | -1 | 17 | -1.048929 | hypothetical protein | |
| PputGB1_1286 | -1 | 14 | -0.018033 | LysR family transcriptional regulator | |
| PputGB1_1287 | 0 | 13 | 1.336838 | aromatic hydrocarbon degradation membrane | |
| PputGB1_1288 | 2 | 16 | 2.391236 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_1282 | TCRTETB | 48 | 5e-08 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| 18 | PputGB1_1336 | PputGB1_1341 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PputGB1_1336 | -1 | 16 | 3.135755 | hypothetical protein | |
| PputGB1_1337 | -3 | 16 | 3.534281 | short chain dehydrogenase | |
| PputGB1_1338 | -2 | 13 | 3.704197 | carbon storage regulator CsrA | |
| PputGB1_1339 | -2 | 14 | 3.377178 | hypothetical protein | |
| PputGB1_1340 | -2 | 13 | 3.173392 | peptidase M42 family hydrolase | |
| PputGB1_1341 | -1 | 12 | 3.020222 | GNAT family acetyltransferase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_1337 | DHBDHDRGNASE | 76 | 2e-18 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_1341 | SACTRNSFRASE | 33 | 0.002 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| 19 | PputGB1_1354 | PputGB1_1389 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PputGB1_1354 | 2 | 19 | 1.042220 | short chain dehydrogenase | |
| PputGB1_1355 | 2 | 20 | 0.869627 | phosphoglycolate phosphatase | |
| PputGB1_1356 | 2 | 17 | 1.046041 | 3-demethylubiquinone-9 3-methyltransferase | |
| PputGB1_1357 | 3 | 17 | 1.053353 | methylthioribose-1-phosphate isomerase | |
| PputGB1_1358 | 4 | 21 | -0.440083 | DNA gyrase subunit A | |
| PputGB1_1359 | 3 | 17 | -1.069204 | phosphoserine aminotransferase | |
| PputGB1_1360 | 4 | 17 | -1.345838 | chorismate mutase | |
| PputGB1_1361 | 2 | 18 | -1.722972 | bifunctional cyclohexadienyl dehydrogenase/ | |
| PputGB1_1362 | -1 | 21 | -3.717119 | cytidylate kinase | |
| PputGB1_1363 | 1 | 31 | -6.223404 | 30S ribosomal protein S1 | |
| PputGB1_1364 | 2 | 47 | -9.395076 | hypothetical protein | |
| PputGB1_1365 | 2 | 48 | -10.445998 | integration host factor subunit beta | |
| PputGB1_1366 | 2 | 52 | -11.656641 | hypothetical protein | |
| PputGB1_1367 | 2 | 52 | -12.264012 | beta-lactamase domain-containing protein | |
| PputGB1_1368 | 3 | 51 | -13.661631 | lipopolysaccharide biosynthesis protein | |
| PputGB1_1369 | 2 | 42 | -12.258060 | polysaccharide biosynthesis protein | |
| PputGB1_1370 | 3 | 35 | -10.302771 | hemolytic protein HlpA-like protein | |
| PputGB1_1371 | 3 | 33 | -8.744003 | hypothetical protein | |
| PputGB1_1372 | 2 | 30 | -6.816266 | glycosyl transferase group 1 protein | |
| PputGB1_1373 | 1 | 28 | -5.409246 | polysaccharide biosynthesis protein CapD | |
| PputGB1_1374 | -1 | 25 | -4.754361 | NAD-dependent epimerase/dehydratase | |
| PputGB1_1375 | -1 | 22 | -4.341229 | UDP-N-acetylglucosamine 2-epimerase | |
| PputGB1_1376 | -1 | 20 | -3.106676 | glycosyl transferase group 1 protein | |
| PputGB1_1377 | 0 | 17 | -2.787915 | NAD-dependent epimerase/dehydratase | |
| PputGB1_1378 | -1 | 21 | -4.816815 | glycosyl transferase family protein | |
| PputGB1_1379 | 0 | 27 | -6.526807 | polysaccharide biosynthesis protein CapD | |
| PputGB1_1380 | 2 | 38 | -8.446620 | dTDP-glucose 4,6-dehydratase | |
| PputGB1_1381 | 3 | 49 | -11.235448 | dTDP-4-dehydrorhamnose reductase | |
| PputGB1_1382 | 4 | 55 | -13.591397 | glucose-1-phosphate thymidylyltransferase | |
| PputGB1_1383 | 3 | 54 | -13.652064 | hypothetical protein | |
| PputGB1_1384 | 3 | 37 | -9.684981 | putative group 1 glycosyl transferase | |
| PputGB1_1385 | 2 | 30 | -8.337020 | glycosyl transferase group 1 protein | |
| PputGB1_1386 | 2 | 25 | -7.275356 | hypothetical protein | |
| PputGB1_1387 | 1 | 20 | -5.731417 | hypothetical protein | |
| PputGB1_1388 | 1 | 19 | -5.297798 | hypothetical protein | |
| PputGB1_1389 | 1 | 15 | -4.057352 | type 12 methyltransferase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_1354 | DHBDHDRGNASE | 89 | 2e-23 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_1365 | DNABINDINGHU | 114 | 4e-37 | Prokaryotic integration host factor signature. | |
>DNABINDINGHU#Prokaryotic integration host factor signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_1373 | NUCEPIMERASE | 68 | 7e-15 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_1374 | NUCEPIMERASE | 71 | 1e-15 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_1377 | NUCEPIMERASE | 83 | 3e-20 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_1379 | NUCEPIMERASE | 61 | 6e-12 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_1380 | NUCEPIMERASE | 183 | 3e-57 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_1381 | NUCEPIMERASE | 45 | 2e-07 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_1389 | GPOSANCHOR | 86 | 5e-19 | Gram-positive coccus surface protein anchor signature. | |
>GPOSANCHOR#Gram-positive coccus surface protein anchor signature. | |||||
| 20 | PputGB1_1453 | PputGB1_1462 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PputGB1_1453 | 2 | 18 | -3.116005 | hypothetical protein | |
| PputGB1_1454 | 3 | 22 | -4.138684 | *****fimbrial protein | |
| PputGB1_1455 | 3 | 25 | -4.934383 | fimbrial biogenesis outer membrane usher | |
| PputGB1_1456 | 3 | 29 | -5.520282 | YD repeat-containing protein | |
| PputGB1_1457 | 3 | 36 | -6.565927 | hypothetical protein | |
| PputGB1_1460 | 2 | 35 | -6.159999 | hypothetical protein | |
| PputGB1_1461 | 3 | 34 | -5.776970 | YD repeat-containing protein | |
| PputGB1_1462 | 2 | 31 | -4.927273 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_1455 | PF00577 | 704 | 0.0 | Outer membrane usher protein FimD | |
>PF00577#Outer membrane usher protein FimD | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_1456 | PF03544 | 32 | 0.018 | Gram-negative bacterial tonB protein | |
>PF03544#Gram-negative bacterial tonB protein | |||||
| 21 | PputGB1_1472 | PputGB1_1481 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PputGB1_1472 | 2 | 18 | 2.866055 | hypothetical protein | |
| PputGB1_1473 | 2 | 18 | 3.271234 | DNA internalization-related competence protein | |
| PputGB1_1474 | -1 | 17 | 2.753171 | MotA/TolQ/ExbB proton channel | |
| PputGB1_1475 | 0 | 17 | 2.861741 | biopolymer transport protein ExbD/TolR | |
| PputGB1_1476 | 3 | 17 | 2.912132 | tetraacyldisaccharide 4'-kinase | |
| PputGB1_1477 | 4 | 15 | 2.315028 | hypothetical protein | |
| PputGB1_1478 | 3 | 14 | 2.163422 | 3-deoxy-manno-octulosonate cytidylyltransferase | |
| PputGB1_1479 | 3 | 13 | 1.705703 | protein tyrosine phosphatase | |
| PputGB1_1480 | 3 | 12 | 1.328176 | UDP-N-acetylenolpyruvoylglucosamine reductase | |
| PputGB1_1481 | 5 | 13 | 0.858985 | ribonuclease |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_1481 | IGASERPTASE | 67 | 4e-13 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| 22 | PputGB1_1551 | PputGB1_1565 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PputGB1_1551 | 2 | 13 | 0.579286 | hypothetical protein | |
| PputGB1_1552 | 5 | 17 | 1.899234 | hypothetical protein | |
| PputGB1_1553 | 4 | 12 | 0.780788 | hypothetical protein | |
| PputGB1_1554 | 4 | 14 | 1.619790 | hypothetical protein | |
| PputGB1_1555 | 5 | 16 | 2.243128 | glutathione S-transferase domain-containing | |
| PputGB1_1556 | 5 | 17 | 2.557607 | SMC domain-containing protein | |
| PputGB1_1557 | 2 | 17 | 2.593490 | nuclease SbcCD subunit D | |
| PputGB1_1558 | 2 | 17 | 2.822566 | hypothetical protein | |
| PputGB1_1559 | 2 | 21 | 4.089156 | hypothetical protein | |
| PputGB1_1560 | 2 | 17 | 3.479987 | hypothetical protein | |
| PputGB1_1561 | 0 | 12 | 3.172791 | von Willebrand factor type A | |
| PputGB1_1562 | 0 | 11 | 2.832669 | hypothetical protein | |
| PputGB1_1563 | 0 | 12 | 2.457535 | hypothetical protein | |
| PputGB1_1564 | 0 | 11 | 2.121011 | ATPase | |
| PputGB1_1565 | 2 | 13 | 1.492793 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_1551 | ACRIFLAVINRP | 79 | 5e-17 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_1556 | RTXTOXIND | 52 | 1e-08 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_1560 | FLGMRINGFLIF | 32 | 0.006 | Flagellar M-ring protein signature. | |
>FLGMRINGFLIF#Flagellar M-ring protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_1564 | HTHFIS | 28 | 0.045 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 23 | PputGB1_1610 | PputGB1_1641 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PputGB1_1610 | -1 | 22 | -4.047929 | D-alanyl-D-alanine | |
| PputGB1_1611 | 2 | 40 | -7.203959 | hypothetical protein | |
| PputGB1_1612 | 2 | 42 | -6.904660 | histidine kinase | |
| PputGB1_1613 | 5 | 61 | -12.279491 | transposase IS3/IS911 family protein | |
| PputGB1_1614 | 5 | 63 | -12.101857 | integrase catalytic subunit | |
| PputGB1_1615 | 6 | 66 | -12.962747 | heat shock protein | |
| PputGB1_1616 | 5 | 68 | -14.361342 | beta-lactamase domain-containing protein | |
| PputGB1_1617 | 6 | 65 | -14.617242 | group II intron maturase-specific | |
| PputGB1_1618 | 7 | 68 | -15.858517 | radical SAM domain-containing protein | |
| PputGB1_1619 | 7 | 59 | -12.228725 | XRE family transcriptional regulator | |
| PputGB1_1620 | 7 | 63 | -12.930197 | hypothetical protein | |
| PputGB1_1621 | 7 | 62 | -11.980181 | hypothetical protein | |
| PputGB1_1622 | 9 | 60 | -11.465167 | hypothetical protein | |
| PputGB1_1623 | 8 | 58 | -12.159200 | hypothetical protein | |
| PputGB1_1624 | 7 | 60 | -12.861550 | hypothetical protein | |
| PputGB1_1625 | 7 | 58 | -12.883830 | hypothetical protein | |
| PputGB1_1626 | 6 | 57 | -14.396666 | hypothetical protein | |
| PputGB1_1627 | 7 | 55 | -14.651241 | transposase IS116/IS110/IS902 family protein | |
| PputGB1_1628 | 7 | 56 | -14.708970 | hypothetical protein | |
| PputGB1_1629 | 8 | 58 | -15.385053 | hypothetical protein | |
| PputGB1_1630 | 8 | 56 | -13.888926 | prophage PSPPH06, putative reverse | |
| PputGB1_1633 | 8 | 60 | -15.031294 | hypothetical protein | |
| PputGB1_1634 | 9 | 60 | -14.328269 | hypothetical protein | |
| PputGB1_1635 | 7 | 61 | -15.222148 | RNA-directed DNA polymerase | |
| PputGB1_1636 | 6 | 65 | -16.394021 | hypothetical protein | |
| PputGB1_1637 | 4 | 51 | -12.715175 | restriction endonuclease-like protein | |
| PputGB1_1638 | 4 | 48 | -12.869667 | integrase family protein | |
| PputGB1_1639 | 3 | 37 | -10.018469 | hypothetical protein | |
| PputGB1_1640 | 2 | 34 | -9.134069 | hypothetical protein | |
| PputGB1_1641 | 1 | 24 | -6.147541 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_1612 | HTHFIS | 67 | 4e-14 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_1615 | SHAPEPROTEIN | 49 | 3e-08 | Bacterial cell shape determinant MreB/Mbl protein s... | |
>SHAPEPROTEIN#Bacterial cell shape determinant MreB/Mbl protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_1616 | RTXTOXINA | 31 | 0.007 | Gram-negative bacterial RTX toxin determinant A family... | |
>RTXTOXINA#Gram-negative bacterial RTX toxin determinant A family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_1633 | BLACTAMASEA | 29 | 0.021 | Beta-lactamase class A signature. | |
>BLACTAMASEA#Beta-lactamase class A signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_1639 | adhesinmafb | 27 | 0.031 | Neisseria meningitidis: adhesin MafB signature. | |
>adhesinmafb#Neisseria meningitidis: adhesin MafB signature. | |||||
| 24 | PputGB1_1711 | PputGB1_1716 | Y ![]() | N | Y | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PputGB1_1711 | 1 | 24 | -4.821155 | integrase family protein | |
| PputGB1_1712 | 2 | 25 | -5.211682 | hypothetical protein | |
| PputGB1_1713 | 2 | 27 | -5.590603 | hypothetical protein | |
| PputGB1_1714 | 1 | 26 | -5.610531 | hypothetical protein | |
| PputGB1_1715 | 1 | 21 | -4.150166 | hypothetical protein | |
| PputGB1_1716 | 1 | 19 | -4.081015 | hypothetical protein |
| 25 | PputGB1_1727 | PputGB1_1736 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PputGB1_1727 | 2 | 23 | -2.834624 | hypothetical protein | |
| PputGB1_1728 | 2 | 28 | -4.062442 | hypothetical protein | |
| PputGB1_1729 | 1 | 28 | -3.936054 | hypothetical protein | |
| PputGB1_1730 | 3 | 29 | -4.474875 | hypothetical protein | |
| PputGB1_1731 | 3 | 32 | -4.565895 | hypothetical protein | |
| PputGB1_1732 | 2 | 32 | -4.287595 | hypothetical protein | |
| PputGB1_1733 | 1 | 31 | -3.795337 | XRE family transcriptional regulator | |
| PputGB1_1734 | 2 | 25 | -2.270914 | hypothetical protein | |
| PputGB1_1735 | -1 | 22 | -1.237372 | hypothetical protein | |
| PputGB1_1736 | 0 | 26 | -3.426248 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_1735 | SECA | 26 | 0.023 | SecA protein signature. | |
>SECA#SecA protein signature. | |||||
| 26 | PputGB1_1760 | PputGB1_1773 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PputGB1_1760 | 1 | 24 | -3.966695 | hypothetical protein | |
| PputGB1_1761 | 2 | 28 | -6.114109 | hypothetical protein | |
| PputGB1_1762 | 2 | 28 | -5.462663 | acyltransferase 3 | |
| PputGB1_1763 | 3 | 26 | -4.594590 | hypothetical protein | |
| PputGB1_1764 | 2 | 28 | -4.635556 | hypothetical protein | |
| PputGB1_1765 | 1 | 26 | -4.398936 | malate dehydrogenase | |
| PputGB1_1766 | -1 | 30 | -5.196774 | hypothetical protein | |
| PputGB1_1767 | 0 | 29 | -5.302700 | dihydroorotase | |
| PputGB1_1768 | 1 | 29 | -5.871185 | allantoate amidohydrolase | |
| PputGB1_1769 | 0 | 26 | -5.462644 | dihydroorotate dehydrogenase family protein | |
| PputGB1_1770 | 0 | 24 | -5.606093 | oxidoreductase FAD-binding subunit | |
| PputGB1_1771 | 0 | 26 | -5.946076 | major facilitator superfamily transporter | |
| PputGB1_1772 | 1 | 25 | -5.755635 | hypothetical protein | |
| PputGB1_1773 | 0 | 17 | -3.327278 | XRE family transcriptional regulator |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_1767 | UREASE | 39 | 3e-05 | Urea amidohydrolase (urease) protein signature. | |
>UREASE#Urea amidohydrolase (urease) protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_1771 | TCRTETA | 59 | 1e-11 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| 27 | PputGB1_1847 | PputGB1_1858 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PputGB1_1847 | 4 | 17 | 1.154673 | hypothetical protein | |
| PputGB1_1848 | 2 | 15 | 1.799152 | putative monovalent cation/H+ antiporter subunit | |
| PputGB1_1849 | 3 | 14 | 1.884905 | putative monovalent cation/H+ antiporter subunit | |
| PputGB1_1850 | 2 | 12 | 1.904023 | putative monovalent cation/H+ antiporter subunit | |
| PputGB1_1851 | 2 | 12 | 1.807117 | putative monovalent cation/H+ antiporter subunit | |
| PputGB1_1852 | 2 | 11 | 2.070851 | putative monovalent cation/H+ antiporter subunit | |
| PputGB1_1853 | 2 | 11 | 2.270668 | putative monovalent cation/H+ antiporter subunit | |
| PputGB1_1854 | 1 | 15 | 1.711701 | hypothetical protein | |
| PputGB1_1855 | 0 | 15 | 1.707064 | XRE family transcriptional regulator | |
| PputGB1_1856 | 1 | 14 | 1.634053 | isochorismatase hydrolase | |
| PputGB1_1857 | 1 | 16 | 1.294914 | AraC family transcriptional regulator | |
| PputGB1_1858 | 2 | 14 | 0.733896 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_1856 | ISCHRISMTASE | 42 | 4e-07 | Isochorismatase signature. | |
>ISCHRISMTASE#Isochorismatase signature. | |||||
| 28 | PputGB1_1898 | PputGB1_1909 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PputGB1_1898 | 2 | 17 | -2.480146 | extracellular solute-binding protein | |
| PputGB1_1899 | 4 | 18 | -2.342252 | bifunctional 5,10-methylene-tetrahydrofolate | |
| PputGB1_1900 | 6 | 19 | -2.936221 | ****hypothetical protein | |
| PputGB1_1901 | 6 | 18 | -2.645844 | trigger factor | |
| PputGB1_1902 | 3 | 13 | -2.340433 | ATP-dependent Clp protease proteolytic subunit | |
| PputGB1_1903 | 4 | 12 | -2.297250 | ATP-dependent protease ATP-binding subunit ClpX | |
| PputGB1_1904 | 3 | 9 | -1.342673 | ATP-dependent protease La | |
| PputGB1_1905 | 1 | 12 | -0.965546 | histone family protein DNA-binding protein | |
| PputGB1_1906 | 1 | 11 | -0.600882 | PpiC-type peptidyl-prolyl cis-trans isomerase | |
| PputGB1_1907 | 1 | 13 | 0.347887 | patatin | |
| PputGB1_1908 | 4 | 13 | 1.127547 | lipoprotein | |
| PputGB1_1909 | 3 | 12 | 1.484429 | CHAD domain-containing protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_1904 | PF05272 | 31 | 0.018 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_1905 | DNABINDINGHU | 120 | 8e-40 | Prokaryotic integration host factor signature. | |
>DNABINDINGHU#Prokaryotic integration host factor signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_1906 | 2FE2SRDCTASE | 31 | 0.012 | Ferric iron reductase signature. | |
>2FE2SRDCTASE#Ferric iron reductase signature. | |||||
| 29 | PputGB1_2121 | PputGB1_2133 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PputGB1_2121 | -1 | 29 | -5.392349 | hypothetical protein | |
| PputGB1_2122 | -1 | 24 | -4.621405 | D-alanyl-D-alanine endopeptidase | |
| PputGB1_2123 | 0 | 29 | -5.808287 | transcriptional regulator CynR | |
| PputGB1_2124 | 0 | 26 | -5.626488 | short-chain dehydrogenase/reductase SDR | |
| PputGB1_2125 | 0 | 23 | -5.354027 | pyridoxamine 5'-phosphate oxidase-like | |
| PputGB1_2126 | 0 | 15 | -4.331170 | endoribonuclease L-PSP | |
| PputGB1_2127 | 1 | 13 | -3.408082 | acetolactate synthase | |
| PputGB1_2128 | 1 | 22 | -3.670097 | hypothetical protein | |
| PputGB1_2129 | 1 | 21 | -2.172232 | alginate lyase 2 | |
| PputGB1_2130 | 2 | 25 | -0.949474 | hypothetical protein | |
| PputGB1_2131 | 4 | 23 | -0.769388 | putative phage repressor | |
| PputGB1_2132 | 5 | 21 | 0.368388 | hypothetical protein | |
| PputGB1_2133 | 2 | 17 | 0.031501 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_2122 | BLACTAMASEA | 51 | 1e-09 | Beta-lactamase class A signature. | |
>BLACTAMASEA#Beta-lactamase class A signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_2124 | DHBDHDRGNASE | 100 | 1e-27 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| 30 | PputGB1_2147 | PputGB1_2156 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PputGB1_2147 | 2 | 14 | 2.928546 | TetR family transcriptional regulator | |
| PputGB1_2148 | 1 | 12 | 3.278219 | 3-hydroxybutyryl-CoA dehydrogenase | |
| PputGB1_2149 | 0 | 12 | 3.268757 | beta-ketothiolase | |
| PputGB1_2150 | 1 | 14 | 2.909418 | AraC family transcriptional regulator | |
| PputGB1_2151 | 1 | 13 | 3.030499 | alkylhydroperoxidase | |
| PputGB1_2152 | 1 | 14 | 3.420556 | major facilitator superfamily transporter | |
| PputGB1_2153 | -1 | 15 | 3.463683 | transcriptional regulator | |
| PputGB1_2154 | -2 | 15 | 3.227769 | hypothetical protein | |
| PputGB1_2155 | -2 | 12 | 3.357386 | flavin reductase domain-containing protein | |
| PputGB1_2156 | -2 | 11 | 3.592557 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_2147 | HTHTETR | 58 | 1e-12 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| 31 | PputGB1_2167 | PputGB1_2183 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PputGB1_2167 | 2 | 13 | 2.032700 | outer membrane porin | |
| PputGB1_2168 | 2 | 15 | 2.367482 | GntR family transcriptional regulator | |
| PputGB1_2169 | 3 | 15 | 2.331940 | ferredoxin | |
| PputGB1_2170 | 3 | 15 | 2.497199 | Rieske (2Fe-2S) domain-containing protein | |
| PputGB1_2171 | 3 | 16 | 2.907486 | ABC transporter-like protein | |
| PputGB1_2172 | 2 | 15 | 2.566839 | hypothetical protein | |
| PputGB1_2173 | 2 | 13 | 2.664486 | putative lipoprotein | |
| PputGB1_2174 | 1 | 12 | 2.337406 | enoyl-CoA hydratase/isomerase | |
| PputGB1_2175 | 0 | 13 | 2.789098 | TetR family transcriptional regulator | |
| PputGB1_2176 | 0 | 13 | 2.326422 | two component transcriptional regulator | |
| PputGB1_2177 | 0 | 11 | 2.597300 | extracellular solute-binding protein | |
| PputGB1_2178 | 1 | 10 | 3.040714 | multi-sensor hybrid histidine kinase | |
| PputGB1_2179 | 0 | 11 | 2.673759 | amino acid permease-associated protein | |
| PputGB1_2180 | 0 | 13 | 3.601758 | enoyl-CoA hydratase/isomerase | |
| PputGB1_2181 | 0 | 10 | 3.490396 | acyl-CoA dehydrogenase domain-containing | |
| PputGB1_2182 | 0 | 11 | 3.645194 | acyl-CoA synthetase | |
| PputGB1_2183 | 1 | 13 | 3.199365 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_2175 | HTHTETR | 63 | 3e-14 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_2176 | HTHFIS | 100 | 3e-26 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_2178 | HTHFIS | 58 | 5e-11 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 32 | PputGB1_2403 | PputGB1_2422 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PputGB1_2403 | 2 | 15 | 0.395454 | hypothetical protein | |
| PputGB1_2404 | 1 | 12 | 0.610906 | hypothetical protein | |
| PputGB1_2405 | 2 | 13 | 1.623610 | endoribonuclease L-PSP | |
| PputGB1_2406 | 1 | 13 | 1.466344 | hypothetical protein | |
| PputGB1_2407 | 1 | 12 | 1.347320 | hypothetical protein | |
| PputGB1_2408 | 1 | 9 | 2.594974 | lipoprotein | |
| PputGB1_2409 | 2 | 9 | 2.282284 | hypothetical protein | |
| PputGB1_2410 | 2 | 9 | 2.260989 | hypothetical protein | |
| PputGB1_2411 | 1 | 10 | 2.019652 | hypothetical protein | |
| PputGB1_2412 | 0 | 11 | 1.631326 | AraC family transcriptional regulator | |
| PputGB1_2413 | 0 | 10 | 1.897572 | 5-oxoprolinase | |
| PputGB1_2414 | -1 | 9 | 1.134402 | hydantoinase B/oxoprolinase | |
| PputGB1_2415 | -1 | 9 | 1.051810 | LysR family transcriptional regulator | |
| PputGB1_2416 | -1 | 12 | 1.304498 | transmembrane pair domain-containing protein | |
| PputGB1_2417 | -2 | 11 | 2.576472 | branched-chain amino acid aminotransferase | |
| PputGB1_2418 | -2 | 10 | 3.494752 | ABC transporter-like protein | |
| PputGB1_2419 | -2 | 8 | 3.497198 | hypothetical protein | |
| PputGB1_2420 | -2 | 9 | 3.292586 | hypothetical protein | |
| PputGB1_2421 | -1 | 8 | 3.060972 | cobalamin biosynthesis protein CobW | |
| PputGB1_2422 | -1 | 9 | 3.798896 | cobaltochelatase subunit CobN |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_2410 | ACRIFLAVINRP | 29 | 0.044 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| 33 | PputGB1_2436 | PputGB1_2469 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PputGB1_2436 | 0 | 15 | 3.332261 | acyl-CoA dehydrogenase domain-containing | |
| PputGB1_2437 | -1 | 16 | 4.276651 | enoyl-CoA hydratase/isomerase | |
| PputGB1_2438 | 0 | 13 | 4.772148 | malonate decarboxylase subunit alpha | |
| PputGB1_2439 | 2 | 15 | 5.911303 | triphosphoribosyl-dephospho-CoA synthase | |
| PputGB1_2440 | 2 | 15 | 5.151479 | malonate decarboxylase subunit delta | |
| PputGB1_2441 | 2 | 15 | 4.842553 | malonate decarboxylase subunit beta | |
| PputGB1_2442 | 3 | 9 | 2.656624 | malonate decarboxylase subunit gamma | |
| PputGB1_2443 | 2 | 9 | 2.453389 | phosphoribosyl-dephospho-CoA transferase | |
| PputGB1_2444 | 2 | 9 | 2.137997 | malonate decarboxylasesubunit epsilon | |
| PputGB1_2445 | 2 | 10 | 1.850515 | malonate transporter subunit MadL | |
| PputGB1_2446 | 1 | 9 | 2.434460 | malonate transporter subunit MadM | |
| PputGB1_2447 | 0 | 9 | 2.278260 | hypothetical protein | |
| PputGB1_2448 | 0 | 10 | 2.736219 | hypothetical protein | |
| PputGB1_2449 | 0 | 12 | 2.603769 | electron transport protein SCO1/SenC | |
| PputGB1_2450 | 0 | 12 | 3.184722 | electron transport protein SCO1/SenC | |
| PputGB1_2451 | 1 | 13 | 3.356291 | cytochrome c | |
| PputGB1_2452 | 1 | 16 | 2.493327 | SurA domain-containing protein | |
| PputGB1_2453 | 1 | 17 | 2.798589 | response regulator receiver protein | |
| PputGB1_2454 | 0 | 19 | 3.045598 | type II secretion system protein E | |
| PputGB1_2455 | 2 | 16 | 3.128644 | hypothetical protein | |
| PputGB1_2456 | 0 | 17 | 2.427501 | hypothetical protein | |
| PputGB1_2457 | -1 | 18 | 2.422142 | hypothetical protein | |
| PputGB1_2458 | -2 | 20 | 1.708022 | hypothetical protein | |
| PputGB1_2459 | -2 | 22 | 1.481854 | type II and III secretion system protein | |
| PputGB1_2460 | -3 | 19 | 1.112031 | secretion type II protein | |
| PputGB1_2461 | 0 | 21 | -3.622211 | type II secretion system protein G | |
| PputGB1_2462 | 1 | 23 | -4.039058 | hypothetical protein | |
| PputGB1_2463 | 2 | 28 | -5.439773 | curli assembly protein CsgE | |
| PputGB1_2464 | -1 | 20 | -1.641813 | curli production assembly/transport protein | |
| PputGB1_2465 | -2 | 18 | -0.215869 | curli production assembly/transport protein | |
| PputGB1_2466 | -1 | 22 | 0.163466 | hypothetical protein | |
| PputGB1_2467 | 0 | 21 | 3.335673 | hypothetical protein | |
| PputGB1_2468 | 0 | 16 | 3.255738 | hypothetical protein | |
| PputGB1_2469 | -2 | 10 | 3.461545 | Fis family GAF modulated sigma54 specific |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_2453 | HTHFIS | 74 | 5e-18 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_2459 | BCTERIALGSPD | 145 | 5e-39 | Bacterial general secretion pathway protein D signa... | |
>BCTERIALGSPD#Bacterial general secretion pathway protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_2460 | BCTERIALGSPG | 50 | 1e-10 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_2461 | BCTERIALGSPG | 64 | 3e-16 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_2469 | HTHFIS | 319 | e-104 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 34 | PputGB1_2599 | PputGB1_2606 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PputGB1_2599 | -1 | 21 | -3.504368 | integral membrane sensor signal transduction | |
| PputGB1_2600 | 0 | 21 | -4.143235 | AsnC family transcriptional regulator | |
| PputGB1_2601 | -1 | 20 | -4.499115 | hypothetical protein | |
| PputGB1_2602 | 1 | 26 | -6.702319 | AsnC family transcriptional regulator | |
| PputGB1_2603 | 0 | 22 | -6.510728 | extracellular solute-binding protein | |
| PputGB1_2604 | -1 | 24 | -6.177581 | polar amino acid ABC transporter inner membrane | |
| PputGB1_2605 | -3 | 21 | -4.586896 | polar amino acid ABC transporter inner membrane | |
| PputGB1_2606 | -4 | 19 | -3.154957 | ABC transporter-like protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_2599 | PF06580 | 47 | 7e-08 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| 35 | PputGB1_2745 | PputGB1_2763 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PputGB1_2745 | 4 | 19 | 1.858836 | major facilitator superfamily transporter | |
| PputGB1_2746 | 3 | 18 | 3.034910 | NIPSNAP family protein | |
| PputGB1_2747 | 2 | 17 | 2.751253 | putative succinate dehydrogenase | |
| PputGB1_2748 | 3 | 16 | 3.302210 | short-chain dehydrogenase/reductase SDR | |
| PputGB1_2749 | 2 | 19 | 0.153867 | AraC family transcriptional regulator | |
| PputGB1_2750 | 3 | 25 | -1.778759 | IclR family transcriptional regulator | |
| PputGB1_2751 | 3 | 30 | -3.234798 | amidase | |
| PputGB1_2752 | 1 | 28 | -5.104349 | major facilitator superfamily transporter | |
| PputGB1_2753 | 1 | 31 | -5.669634 | amidohydrolase | |
| PputGB1_2757 | 1 | 34 | -6.771455 | hypothetical protein | |
| PputGB1_2758 | 0 | 24 | -4.600252 | PAAR repeat-containing protein | |
| PputGB1_2759 | 0 | 12 | -3.421373 | hypothetical protein | |
| PputGB1_2760 | 0 | 11 | -2.202894 | ImpA family type VI secretion-associated | |
| PputGB1_2761 | 0 | 11 | -1.436172 | ADP-ribosylation/crystallin J1 | |
| PputGB1_2762 | 1 | 12 | -1.479793 | hypothetical protein | |
| PputGB1_2763 | 2 | 15 | -0.956672 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_2745 | TCRTETA | 53 | 9e-10 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_2748 | DHBDHDRGNASE | 159 | 9e-50 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_2752 | TCRTETA | 33 | 0.002 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_2762 | SALSPVBPROT | 42 | 5e-06 | Salmonella virulence plasmid 65kDa B protein signature. | |
>SALSPVBPROT#Salmonella virulence plasmid 65kDa B protein signature. | |||||
| 36 | PputGB1_2813 | PputGB1_2831 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PputGB1_2813 | 2 | 10 | 1.644986 | hypothetical protein | |
| PputGB1_2814 | 2 | 11 | 1.263537 | AraC family transcriptional regulator | |
| PputGB1_2815 | 0 | 10 | 1.463240 | Rieske (2Fe-2S) domain-containing protein | |
| PputGB1_2816 | 1 | 10 | 1.259480 | DSBA oxidoreductase | |
| PputGB1_2817 | 0 | 9 | 1.599635 | major facilitator superfamily transporter | |
| PputGB1_2818 | -1 | 12 | 1.315135 | hypothetical protein | |
| PputGB1_2819 | -1 | 13 | 1.305325 | taurine dioxygenase | |
| PputGB1_2820 | 0 | 15 | 0.589558 | alcohol dehydrogenase | |
| PputGB1_2821 | 3 | 20 | -0.601813 | MerR family transcriptional regulator | |
| PputGB1_2822 | 1 | 22 | -0.646258 | NADH:flavin oxidoreductase | |
| PputGB1_2823 | 2 | 27 | -3.852436 | SmpA/OmlA domain-containing protein | |
| PputGB1_2824 | 3 | 30 | -5.118917 | hypothetical protein | |
| PputGB1_2825 | 1 | 26 | -5.493746 | hypothetical protein | |
| PputGB1_2826 | 0 | 29 | -5.825306 | hypothetical protein | |
| PputGB1_2827 | 0 | 32 | -5.884639 | hypothetical protein | |
| PputGB1_2828 | 2 | 34 | -6.852751 | hypothetical protein | |
| PputGB1_2829 | 1 | 29 | -4.674787 | hypothetical protein | |
| PputGB1_2830 | 2 | 29 | -4.851538 | acetyltransferase | |
| PputGB1_2831 | 2 | 16 | -3.657777 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_2817 | TCRTETB | 56 | 1e-10 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_2820 | PF06704 | 28 | 0.019 | DspF/AvrF protein | |
>PF06704#DspF/AvrF protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_2823 | adhesinb | 30 | 0.001 | Adhesin B signature. | |
>adhesinb#Adhesin B signature. | |||||
| 37 | PputGB1_2884 | PputGB1_2902 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PputGB1_2884 | 3 | 12 | 0.415081 | hypothetical protein | |
| PputGB1_2885 | 2 | 11 | 0.405352 | hypothetical protein | |
| PputGB1_2886 | 1 | 12 | 0.141926 | hypothetical protein | |
| PputGB1_2887 | 1 | 9 | 0.272412 | hypothetical protein | |
| PputGB1_2888 | 2 | 11 | 1.114849 | hypothetical protein | |
| PputGB1_2889 | 2 | 11 | 1.336219 | hypothetical protein | |
| PputGB1_2890 | 0 | 11 | 1.388432 | surface antigen (D15) | |
| PputGB1_2891 | 1 | 14 | 2.631261 | N-acetyltransferase GCN5 | |
| PputGB1_2892 | 2 | 13 | 3.828578 | exonuclease III | |
| PputGB1_2893 | 2 | 13 | 4.102031 | putative transmembrane anti-sigma factor | |
| PputGB1_2894 | 1 | 13 | 3.899894 | ECF subfamily RNA polymerase sigma-24 factor | |
| PputGB1_2895 | 1 | 13 | 3.407817 | catalase domain-containing protein | |
| PputGB1_2896 | 3 | 15 | 2.522716 | cytochrome B561 | |
| PputGB1_2897 | 1 | 16 | 1.928086 | major facilitator superfamily transporter | |
| PputGB1_2898 | -1 | 19 | 0.450655 | XRE family transcriptional regulator | |
| PputGB1_2899 | 1 | 18 | 0.192464 | hypothetical protein | |
| PputGB1_2900 | 2 | 15 | 0.425892 | DSBA oxidoreductase | |
| PputGB1_2901 | 1 | 14 | 0.242868 | short-chain dehydrogenase/reductase SDR | |
| PputGB1_2902 | 2 | 13 | 0.681685 | TetR family transcriptional regulator |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_2897 | TCRTETA | 95 | 1e-23 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_2902 | HTHTETR | 53 | 6e-11 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| 38 | PputGB1_2932 | PputGB1_3009 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PputGB1_2932 | 2 | 11 | 3.057056 | urease accessory protein UreF | |
| PputGB1_2933 | 2 | 11 | 2.853743 | HupE/UreJ protein | |
| PputGB1_2934 | 3 | 12 | 2.615911 | urease accessory protein UreE | |
| PputGB1_2935 | 2 | 11 | 2.697258 | urease subunit alpha | |
| PputGB1_2936 | -1 | 13 | 1.976808 | urease subunit beta | |
| PputGB1_2937 | 1 | 12 | 2.012854 | urease subunit gamma | |
| PputGB1_2938 | 0 | 11 | 1.519208 | urease accessory protein UreD | |
| PputGB1_2939 | 0 | 11 | 1.289865 | integrase family protein | |
| PputGB1_2940 | 2 | 10 | 1.380423 | NnrS family protein | |
| PputGB1_2943 | 0 | 9 | 1.229236 | DEAD/DEAH box helicase | |
| PputGB1_2944 | 0 | 9 | 1.114479 | VRR-NUC domain-containing protein | |
| PputGB1_2945 | 0 | 9 | 0.957202 | major facilitator superfamily transporter | |
| PputGB1_2946 | 0 | 10 | 1.242781 | hypothetical protein | |
| PputGB1_2947 | 1 | 10 | 1.204749 | malate/L-lactate dehydrogenase | |
| PputGB1_2948 | 2 | 10 | 0.923293 | galactarate dehydratase | |
| PputGB1_2949 | 3 | 14 | 0.540822 | LysR family transcriptional regulator | |
| PputGB1_2950 | 3 | 15 | 0.491238 | LysR family transcriptional regulator | |
| PputGB1_2951 | 2 | 14 | 0.653741 | mandelate racemase/muconate lactonizing protein | |
| PputGB1_2952 | 0 | 18 | -0.431301 | major facilitator superfamily transporter | |
| PputGB1_2953 | 0 | 24 | -1.472401 | GntR family transcriptional regulator | |
| PputGB1_2954 | -2 | 22 | -2.234384 | hypothetical protein | |
| PputGB1_2955 | 0 | 23 | -3.267066 | alcohol dehydrogenase | |
| PputGB1_2956 | 2 | 29 | -3.836573 | LysR family transcriptional regulator | |
| PputGB1_2957 | 1 | 33 | -5.332122 | integrase family protein | |
| PputGB1_2958 | 0 | 36 | -4.891752 | N-acetyltransferase GCN5 | |
| PputGB1_2959 | -1 | 31 | -3.929065 | hypothetical protein | |
| PputGB1_2960 | -1 | 31 | -3.457727 | hypothetical protein | |
| PputGB1_2961 | -2 | 22 | -2.167049 | hypothetical protein | |
| PputGB1_2962 | -1 | 25 | -2.726346 | PAS/PAC sensor-containing diguanylate | |
| PputGB1_2963 | -2 | 24 | -1.658639 | hypothetical protein | |
| PputGB1_2964 | -2 | 24 | -1.948718 | hypothetical protein | |
| PputGB1_2965 | -2 | 23 | -2.066260 | hypothetical protein | |
| PputGB1_2966 | -3 | 26 | -3.770104 | thiamine pyrophosphate protein | |
| PputGB1_2967 | 2 | 40 | -7.311900 | hypothetical protein | |
| PputGB1_2968 | 4 | 36 | -7.293013 | hypothetical protein | |
| PputGB1_2969 | 4 | 36 | -7.726292 | hypothetical protein | |
| PputGB1_2970 | 4 | 38 | -7.612562 | LysR family transcriptional regulator | |
| PputGB1_2971 | 5 | 39 | -7.984071 | integrase catalytic subunit | |
| PputGB1_2972 | 6 | 41 | -6.760722 | transposase IS3/IS911 family protein | |
| PputGB1_2973 | 3 | 45 | -6.766925 | AraC family transcriptional regulator | |
| PputGB1_2974 | 1 | 46 | -6.518964 | peptidase | |
| PputGB1_2975 | 1 | 43 | -6.620313 | hypothetical protein | |
| PputGB1_2976 | 2 | 39 | -6.001908 | NUDIX hydrolase | |
| PputGB1_2977 | 2 | 40 | -6.045083 | hypothetical protein | |
| PputGB1_2978 | 2 | 41 | -6.362712 | methyltransferase small | |
| PputGB1_2979 | 1 | 37 | -5.792523 | major facilitator superfamily transporter | |
| PputGB1_2980 | 3 | 35 | -5.671137 | dienelactone hydrolase | |
| PputGB1_2981 | 3 | 34 | -4.690909 | AraC family transcriptional regulator | |
| PputGB1_2982 | 2 | 36 | -5.099904 | hypothetical protein | |
| PputGB1_2983 | 2 | 36 | -5.627164 | hypothetical protein | |
| PputGB1_2984 | 3 | 35 | -5.753694 | alcohol dehydrogenase | |
| PputGB1_2985 | 4 | 40 | -6.218927 | hypothetical protein | |
| PputGB1_2986 | 4 | 41 | -6.449294 | short chain dehydrogenase | |
| PputGB1_2987 | 5 | 42 | -8.079942 | PfpI family intracellular peptidase | |
| PputGB1_2988 | 7 | 48 | -8.438338 | histidine kinase | |
| PputGB1_2989 | 7 | 46 | -8.535180 | response regulator receiver protein | |
| PputGB1_2990 | 6 | 46 | -8.425867 | hypothetical protein | |
| PputGB1_2991 | 6 | 46 | -8.591904 | response regulator receiver protein | |
| PputGB1_2992 | 6 | 46 | -8.524545 | alpha/beta hydrolase fold family protein | |
| PputGB1_2993 | 6 | 45 | -8.073097 | PAS/PAC sensor signal transduction histidine | |
| PputGB1_2994 | 5 | 39 | -7.071983 | hypothetical protein | |
| PputGB1_2995 | 5 | 37 | -6.593923 | response regulator receiver protein | |
| PputGB1_2996 | 5 | 32 | -5.428983 | hypothetical protein | |
| PputGB1_2997 | 5 | 32 | -4.952138 | hypothetical protein | |
| PputGB1_2998 | 4 | 30 | -4.178111 | hypothetical protein | |
| PputGB1_2999 | 4 | 29 | -3.807632 | peptidase M42 family protein | |
| PputGB1_3000 | 3 | 29 | -3.928008 | hypothetical protein | |
| PputGB1_3001 | 3 | 29 | -3.522098 | short-chain dehydrogenase/reductase SDR | |
| PputGB1_3002 | 3 | 30 | -4.133299 | hypothetical protein | |
| PputGB1_3003 | 3 | 28 | -4.106500 | CinA domain-containing protein | |
| PputGB1_3004 | 3 | 29 | -4.865728 | hypothetical protein | |
| PputGB1_3005 | 2 | 28 | -4.727246 | hypothetical protein | |
| PputGB1_3006 | 2 | 27 | -4.415105 | glycoside hydrolase 15-related | |
| PputGB1_3007 | 1 | 27 | -5.169202 | hemerythrin HHE cation binding domain-containing | |
| PputGB1_3008 | 0 | 28 | -4.576653 | hypothetical protein | |
| PputGB1_3009 | 0 | 29 | -4.529773 | alcohol dehydrogenase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_2933 | FLGBIOSNFLIP | 27 | 0.035 | Escherichia coli: Flagellar biosynthetic protein Fl... | |
>FLGBIOSNFLIP#Escherichia coli: Flagellar biosynthetic protein FliP | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_2935 | UREASE | 1063 | 0.0 | Urea amidohydrolase (urease) protein signature. | |
>UREASE#Urea amidohydrolase (urease) protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_2945 | TCRTETB | 42 | 3e-06 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_2952 | TCRTETB | 37 | 2e-04 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_2956 | PF05043 | 28 | 0.035 | Transcriptional activator | |
>PF05043#Transcriptional activator | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_2958 | SACTRNSFRASE | 29 | 0.005 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_2963 | cloacin | 34 | 1e-04 | Cloacin signature. | |
>cloacin#Cloacin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_2970 | HTHFIS | 31 | 2e-04 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_2979 | TCRTETA | 56 | 7e-11 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_2986 | DHBDHDRGNASE | 65 | 6e-14 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_2988 | PF06580 | 37 | 7e-05 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_2989 | HTHFIS | 73 | 2e-18 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_2991 | HTHFIS | 67 | 3e-16 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_2995 | HTHFIS | 61 | 6e-14 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_3001 | DHBDHDRGNASE | 109 | 1e-30 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| 39 | PputGB1_3023 | PputGB1_3036 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PputGB1_3023 | 2 | 22 | -1.382458 | hypothetical protein | |
| PputGB1_3024 | 0 | 20 | -2.779872 | aldehyde dehydrogenase | |
| PputGB1_3025 | 1 | 20 | -4.621261 | hypothetical protein | |
| PputGB1_3026 | 0 | 22 | -4.845336 | N-acetyltransferase GCN5 | |
| PputGB1_3027 | -1 | 23 | -5.134900 | hypothetical protein | |
| PputGB1_3028 | -1 | 24 | -5.312476 | hypothetical protein | |
| PputGB1_3029 | -1 | 25 | -5.434032 | hypothetical protein | |
| PputGB1_3030 | 0 | 34 | -5.931252 | hypothetical protein | |
| PputGB1_3031 | 1 | 44 | -7.062332 | hypothetical protein | |
| PputGB1_3032 | 2 | 36 | -6.368641 | hypothetical protein | |
| PputGB1_3033 | 1 | 27 | -5.596089 | MerR family transcriptional regulator | |
| PputGB1_3034 | 2 | 27 | -5.464494 | integrase family protein | |
| PputGB1_3035 | 2 | 24 | -4.970607 | aminoglycoside/hydroxyurea antibiotic resistance | |
| PputGB1_3036 | -1 | 20 | -3.550132 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_3026 | SACTRNSFRASE | 33 | 3e-04 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_3032 | NUCEPIMERASE | 37 | 7e-05 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| 40 | PputGB1_3127 | PputGB1_3132 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PputGB1_3127 | 2 | 14 | 2.129705 | extracellular solute-binding protein | |
| PputGB1_3128 | 4 | 16 | 2.826516 | cytochrome c class I | |
| PputGB1_3129 | 3 | 16 | 2.601303 | methanol/ethanol family PQQ-dependent | |
| PputGB1_3130 | 4 | 17 | 3.242597 | pentapeptide repeat-containing protein | |
| PputGB1_3131 | 3 | 17 | 2.832391 | two component LuxR family transcriptional | |
| PputGB1_3132 | 4 | 16 | 2.886215 | integral membrane sensor signal transduction |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_3131 | HTHFIS | 70 | 2e-16 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 41 | PputGB1_3156 | PputGB1_3176 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PputGB1_3156 | -1 | 13 | 3.547799 | LysR family transcriptional regulator | |
| PputGB1_3157 | -2 | 12 | 3.742007 | type 2 acyl-CoA dehydrogenase | |
| PputGB1_3158 | -1 | 12 | 3.605691 | binding-protein-dependent transport system inner | |
| PputGB1_3159 | -1 | 10 | 3.332430 | NLPA lipoprotein | |
| PputGB1_3160 | 0 | 12 | 3.558579 | ABC transporter-like protein | |
| PputGB1_3161 | 0 | 13 | 3.515802 | cystathionine beta-lyase | |
| PputGB1_3162 | -1 | 14 | 2.599703 | hypothetical protein | |
| PputGB1_3163 | -1 | 14 | 2.446491 | ABC transporter-like protein | |
| PputGB1_3164 | 0 | 12 | 2.620955 | polar amino acid ABC transporter inner membrane | |
| PputGB1_3165 | 0 | 11 | 2.899195 | polar amino acid ABC transporter inner membrane | |
| PputGB1_3166 | 2 | 9 | 2.640631 | extracellular solute-binding protein | |
| PputGB1_3167 | 0 | 11 | -0.013516 | LysR family transcriptional regulator | |
| PputGB1_3168 | 0 | 15 | -2.513223 | AsnC family transcriptional regulator | |
| PputGB1_3169 | -1 | 24 | -4.529323 | AzlC family protein | |
| PputGB1_3170 | -1 | 32 | -6.374418 | branched-chain amino acid transport | |
| PputGB1_3171 | -2 | 34 | -7.803827 | UspA domain-containing protein | |
| PputGB1_3172 | -1 | 39 | -8.299316 | hypothetical protein | |
| PputGB1_3173 | -1 | 37 | -7.028230 | hypothetical protein | |
| PputGB1_3174 | -2 | 32 | -6.217677 | cupin 4 family protein | |
| PputGB1_3175 | -2 | 28 | -5.428583 | ABC transporter-like protein | |
| PputGB1_3176 | -1 | 26 | -3.546198 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_3175 | ACETATEKNASE | 29 | 0.035 | Acetate kinase family signature. | |
>ACETATEKNASE#Acetate kinase family signature. | |||||
| 42 | PputGB1_3187 | PputGB1_3207 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PputGB1_3187 | -1 | 26 | -4.471446 | transcriptional regulator | |
| PputGB1_3188 | -1 | 26 | -5.031136 | ferredoxin | |
| PputGB1_3189 | 0 | 25 | -3.079501 | hypothetical protein | |
| PputGB1_3190 | 1 | 24 | -1.513536 | hypothetical protein | |
| PputGB1_3191 | 1 | 21 | -0.147423 | dihydrodipicolinate synthetase | |
| PputGB1_3192 | 0 | 17 | 0.217035 | hypothetical protein | |
| PputGB1_3193 | 1 | 12 | 2.590950 | dihydrodipicolinate synthase | |
| PputGB1_3194 | 2 | 12 | 2.667230 | cellulose synthase subunit BcsC | |
| PputGB1_3195 | 1 | 11 | 2.276680 | endo-1,4-D-glucanase | |
| PputGB1_3196 | 1 | 12 | 1.964908 | cellulose synthase regulator protein | |
| PputGB1_3197 | 2 | 10 | 2.170586 | cellulose synthase catalytic subunit | |
| PputGB1_3198 | 0 | 8 | 1.616919 | cellulose synthase | |
| PputGB1_3199 | 0 | 10 | 1.178064 | hypothetical protein | |
| PputGB1_3200 | 0 | 9 | 1.355089 | hypothetical protein | |
| PputGB1_3201 | -1 | 8 | 1.283562 | hypothetical protein | |
| PputGB1_3202 | -1 | 8 | 1.493135 | putative protease | |
| PputGB1_3203 | 0 | 10 | 1.409249 | ABC transporter-like protein | |
| PputGB1_3204 | -1 | 15 | 3.216617 | IclR family transcriptional regulator | |
| PputGB1_3205 | 0 | 19 | 4.081641 | ABC transporter-like protein | |
| PputGB1_3206 | -1 | 21 | 3.717261 | binding-protein-dependent transport system inner | |
| PputGB1_3207 | -1 | 18 | 3.273644 | binding-protein-dependent transport system inner |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_3187 | ANTHRAXTOXNA | 34 | 0.002 | Anthrax toxin LF subunit signature. | |
>ANTHRAXTOXNA#Anthrax toxin LF subunit signature. | |||||
| 43 | PputGB1_3221 | PputGB1_3243 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PputGB1_3221 | -1 | 27 | -4.278954 | type VI secretion protein IcmF | |
| PputGB1_3222 | -1 | 24 | -4.702518 | type VI secretion-associated protein | |
| PputGB1_3223 | -1 | 23 | -5.154189 | hypothetical protein | |
| PputGB1_3224 | -1 | 22 | -5.038425 | type VI secretion protein | |
| PputGB1_3225 | -1 | 22 | -4.600853 | EvpB family type VI secretion protein | |
| PputGB1_3226 | -1 | 21 | -3.264070 | type VI secretion system lysozyme-like protein | |
| PputGB1_3227 | -1 | 21 | -3.638071 | type VI secretion protein | |
| PputGB1_3228 | -2 | 20 | -3.133117 | type VI secretion protein | |
| PputGB1_3229 | -1 | 19 | -3.470909 | FHA domain-containing protein | |
| PputGB1_3230 | -1 | 19 | -3.500834 | hypothetical protein | |
| PputGB1_3231 | -3 | 19 | -3.127929 | type VI secretion protein | |
| PputGB1_3232 | -1 | 22 | -4.128367 | hypothetical protein | |
| PputGB1_3233 | -1 | 22 | -3.839300 | Hcp1 family type VI secretion system effector | |
| PputGB1_3234 | -2 | 18 | -2.984124 | ImpA family type VI secretion-associated | |
| PputGB1_3235 | -2 | 17 | -1.987814 | hypothetical protein | |
| PputGB1_3236 | -1 | 13 | -1.126850 | hypothetical protein | |
| PputGB1_3237 | 0 | 10 | 0.378943 | hypothetical protein | |
| PputGB1_3238 | 1 | 10 | 3.097013 | PAAR repeat-containing protein | |
| PputGB1_3239 | 0 | 9 | 3.343061 | major facilitator superfamily transporter | |
| PputGB1_3240 | 0 | 9 | 3.813809 | xylose isomerase domain-containing protein | |
| PputGB1_3241 | 0 | 10 | 3.559415 | oxidoreductase domain-containing protein | |
| PputGB1_3242 | 0 | 11 | 3.843242 | IclR family transcriptional regulator | |
| PputGB1_3243 | 0 | 10 | 3.192324 | putative FAD-binding dehydrogenase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_3228 | PF05946 | 31 | 0.005 | Toxin-coregulated pilus subunit TcpA | |
>PF05946#Toxin-coregulated pilus subunit TcpA | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_3239 | TCRTETB | 39 | 3e-05 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_3241 | TYPE3IMSPROT | 38 | 4e-05 | Type III secretion system inner membrane S protein ... | |
>TYPE3IMSPROT#Type III secretion system inner membrane S protein | |||||
| 44 | PputGB1_3281 | PputGB1_3290 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PputGB1_3281 | 2 | 11 | 2.700869 | anti-FecI sigma factor FecR | |
| PputGB1_3282 | 2 | 10 | 2.495801 | ECF subfamily RNA polymerase sigma-24 factor | |
| PputGB1_3283 | 1 | 10 | 2.073002 | hypothetical protein | |
| PputGB1_3284 | 1 | 11 | 2.493689 | TetR family transcriptional regulator | |
| PputGB1_3285 | 3 | 14 | 2.010261 | EmrB/QacA family drug resistance transporter | |
| PputGB1_3286 | 3 | 14 | 0.902685 | major facilitator superfamily transporter | |
| PputGB1_3287 | 3 | 15 | 0.346729 | hypothetical protein | |
| PputGB1_3288 | 1 | 13 | -0.154824 | hypothetical protein | |
| PputGB1_3289 | 3 | 16 | -0.376824 | paraquat-inducible protein A | |
| PputGB1_3290 | 2 | 15 | -0.359720 | paraquat-inducible protein A |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_3284 | HTHTETR | 62 | 4e-14 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_3285 | TCRTETB | 138 | 3e-38 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| 45 | PputGB1_3334 | PputGB1_3353 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PputGB1_3334 | -1 | 18 | 3.375333 | alkanesulfonate monooxygenase | |
| PputGB1_3335 | 0 | 18 | 3.234344 | oligopeptide/dipeptide ABC transporter ATPase | |
| PputGB1_3336 | -1 | 12 | 3.461314 | binding-protein-dependent transport system inner | |
| PputGB1_3337 | -3 | 11 | 3.666181 | binding-protein-dependent transport system inner | |
| PputGB1_3338 | -2 | 12 | 3.786953 | extracellular solute-binding protein | |
| PputGB1_3339 | -1 | 14 | 4.456747 | alkanesulfonate monooxygenase | |
| PputGB1_3340 | -1 | 16 | 4.407889 | class II aldolase/adducin family protein | |
| PputGB1_3341 | -1 | 18 | 4.672840 | hypothetical protein | |
| PputGB1_3342 | -1 | 17 | 4.217994 | type 2 acyl-CoA dehydrogenase | |
| PputGB1_3343 | 0 | 18 | 3.468764 | ABC transporter-like protein | |
| PputGB1_3344 | 1 | 18 | 3.075222 | ABC transporter-like protein | |
| PputGB1_3345 | 2 | 19 | 2.664352 | alkanesulfonate monooxygenase | |
| PputGB1_3346 | 1 | 17 | 2.470490 | hypothetical protein | |
| PputGB1_3347 | 1 | 15 | 2.120140 | hypothetical protein | |
| PputGB1_3348 | 3 | 14 | 1.771475 | TonB-dependent receptor | |
| PputGB1_3349 | 2 | 13 | 1.932355 | TonB-dependent receptor | |
| PputGB1_3350 | 3 | 13 | 1.718905 | binding-protein-dependent transport system inner | |
| PputGB1_3351 | 2 | 13 | 1.569750 | binding-protein-dependent transport system inner | |
| PputGB1_3352 | 3 | 13 | 1.442970 | ABC transporter-like protein | |
| PputGB1_3353 | 2 | 10 | 1.132585 | heme peroxidase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_3353 | RTXTOXINA | 142 | 1e-35 | Gram-negative bacterial RTX toxin determinant A family... | |
>RTXTOXINA#Gram-negative bacterial RTX toxin determinant A family | |||||
| 46 | PputGB1_3371 | PputGB1_3480 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PputGB1_3371 | -2 | 27 | -4.246134 | trans-aconitate 2-methyltransferase | |
| PputGB1_3372 | -1 | 34 | -5.591500 | amino acid permease-associated protein | |
| PputGB1_3373 | 1 | 37 | -6.367072 | phytanoyl-CoA dioxygenase | |
| PputGB1_3374 | 2 | 41 | -7.120860 | LysR family transcriptional regulator | |
| PputGB1_3376 | 2 | 41 | -7.913254 | hypothetical protein | |
| PputGB1_3377 | 2 | 38 | -7.018608 | hypothetical protein | |
| PputGB1_3378 | 1 | 34 | -5.134717 | hypothetical protein | |
| PputGB1_3379 | 2 | 31 | -4.601792 | hypothetical protein | |
| PputGB1_3380 | 1 | 33 | -4.842111 | hypothetical protein | |
| PputGB1_3381 | 1 | 33 | -4.368133 | hypothetical protein | |
| PputGB1_3382 | 0 | 32 | -3.407714 | hypothetical protein | |
| PputGB1_3383 | 1 | 32 | -3.427382 | hypothetical protein | |
| PputGB1_3384 | 1 | 30 | -3.597150 | chromate transporter | |
| PputGB1_3385 | 2 | 35 | -2.859692 | lysine exporter protein LysE/YggA | |
| PputGB1_3386 | 1 | 31 | -2.334315 | hypothetical protein | |
| PputGB1_3387 | -1 | 20 | 0.171243 | hypothetical protein | |
| PputGB1_3388 | -1 | 19 | -0.053679 | lysozyme | |
| PputGB1_3389 | 0 | 18 | -0.016531 | hypothetical protein | |
| PputGB1_3390 | 0 | 18 | -0.060565 | hypothetical protein | |
| PputGB1_3391 | -1 | 20 | -0.680836 | hypothetical protein | |
| PputGB1_3392 | -1 | 19 | -0.236933 | hypothetical protein | |
| PputGB1_3393 | 3 | 25 | -2.730052 | hypothetical protein | |
| PputGB1_3394 | 3 | 25 | -2.865615 | hypothetical protein | |
| PputGB1_3395 | 2 | 26 | -3.477709 | hypothetical protein | |
| PputGB1_3396 | 3 | 27 | -3.786798 | lambda family phage tail tape measure protein | |
| PputGB1_3397 | 2 | 28 | -4.649942 | hypothetical protein | |
| PputGB1_3398 | 3 | 33 | -7.666650 | hypothetical protein | |
| PputGB1_3399 | 4 | 40 | -9.204109 | hypothetical protein | |
| PputGB1_3400 | 4 | 47 | -10.693295 | prophage antirepressor | |
| PputGB1_3401 | 8 | 54 | -11.284419 | Arc domain-containing protein | |
| PputGB1_3402 | 7 | 47 | -9.907151 | Arc domain-containing protein | |
| PputGB1_3403 | 5 | 37 | -8.062087 | hypothetical protein | |
| PputGB1_3404 | 4 | 32 | -4.643828 | hypothetical protein | |
| PputGB1_3405 | 4 | 25 | -1.766023 | hypothetical protein | |
| PputGB1_3406 | 4 | 23 | -1.374543 | hypothetical protein | |
| PputGB1_3407 | 3 | 23 | -2.106063 | hypothetical protein | |
| PputGB1_3408 | 4 | 23 | -1.897227 | tail protein 3 | |
| PputGB1_3409 | 4 | 27 | -2.629316 | hypothetical protein | |
| PputGB1_3410 | 3 | 23 | -1.974113 | hypothetical protein | |
| PputGB1_3411 | 4 | 22 | -1.875489 | hypothetical protein | |
| PputGB1_3412 | 4 | 22 | -1.640753 | hypothetical protein | |
| PputGB1_3413 | 4 | 21 | -0.918462 | hypothetical protein | |
| PputGB1_3414 | 5 | 20 | -1.110221 | hypothetical protein | |
| PputGB1_3415 | 5 | 20 | -0.995794 | hypothetical protein | |
| PputGB1_3416 | 5 | 21 | -1.134085 | hypothetical protein | |
| PputGB1_3417 | 5 | 23 | -1.867142 | SPP1 family phage head morphogenesis protein | |
| PputGB1_3418 | 4 | 21 | -1.620114 | hypothetical protein | |
| PputGB1_3419 | 4 | 24 | -2.209827 | hypothetical protein | |
| PputGB1_3420 | 2 | 26 | -2.526682 | hypothetical protein | |
| PputGB1_3421 | 3 | 29 | -2.101455 | hypothetical protein | |
| PputGB1_3422 | 2 | 25 | -1.753384 | hypothetical protein | |
| PputGB1_3423 | 1 | 21 | -0.341107 | 20S proteasome subunits A and B | |
| PputGB1_3424 | 0 | 21 | -0.219041 | hypothetical protein | |
| PputGB1_3425 | -1 | 18 | -0.523465 | hypothetical protein | |
| PputGB1_3426 | -1 | 22 | -1.055660 | peptidase M48, Ste24p | |
| PputGB1_3427 | -1 | 21 | -0.850106 | *hypothetical protein | |
| PputGB1_3428 | 0 | 19 | -0.147250 | hypothetical protein | |
| PputGB1_3429 | 2 | 18 | -0.042236 | lambda NinG family protein | |
| PputGB1_3430 | 4 | 20 | -0.625709 | hypothetical protein | |
| PputGB1_3431 | 4 | 23 | 0.010992 | hypothetical protein | |
| PputGB1_3432 | 4 | 24 | -0.241947 | hypothetical protein | |
| PputGB1_3433 | 5 | 22 | 0.131114 | hypothetical protein | |
| PputGB1_3434 | 3 | 20 | -0.875137 | hypothetical protein | |
| PputGB1_3435 | 1 | 18 | -1.379690 | hypothetical protein | |
| PputGB1_3436 | 1 | 18 | -1.452165 | hypothetical protein | |
| PputGB1_3437 | 2 | 18 | -1.802041 | hypothetical protein | |
| PputGB1_3438 | 3 | 19 | -2.393453 | IstB ATP binding domain-containing protein | |
| PputGB1_3439 | 4 | 23 | -3.367458 | putative transcriptional regulator | |
| PputGB1_3440 | 6 | 35 | -5.222258 | prophage antirepressor | |
| PputGB1_3441 | 8 | 41 | -6.188651 | hypothetical protein | |
| PputGB1_3442 | 8 | 41 | -6.115728 | hypothetical protein | |
| PputGB1_3443 | 6 | 41 | -5.345451 | XRE family transcriptional regulator | |
| PputGB1_3444 | 5 | 35 | -3.941677 | hypothetical protein | |
| PputGB1_3445 | 4 | 34 | -3.704776 | hypothetical protein | |
| PputGB1_3446 | 3 | 30 | -0.729540 | hypothetical protein | |
| PputGB1_3447 | 5 | 32 | -1.750900 | hypothetical protein | |
| PputGB1_3448 | 5 | 32 | -1.662553 | hypothetical protein | |
| PputGB1_3449 | 12 | 26 | -0.362130 | hypothetical protein | |
| PputGB1_3450 | 10 | 28 | -1.519840 | hypothetical protein | |
| PputGB1_3451 | 8 | 27 | -1.497471 | hypothetical protein | |
| PputGB1_3452 | 9 | 24 | -1.490662 | hypothetical protein | |
| PputGB1_3453 | 8 | 22 | -0.491528 | hypothetical protein | |
| PputGB1_3454 | 8 | 20 | -1.624314 | hypothetical protein | |
| PputGB1_3455 | 3 | 21 | -3.188502 | ERF family protein | |
| PputGB1_3456 | 0 | 18 | -1.211321 | exonuclease, phage-type | |
| PputGB1_3457 | -1 | 22 | -1.528991 | hypothetical protein | |
| PputGB1_3458 | -1 | 20 | -1.824114 | hypothetical protein | |
| PputGB1_3459 | -1 | 22 | -2.211179 | hypothetical protein | |
| PputGB1_3460 | 0 | 21 | -1.501974 | hypothetical protein | |
| PputGB1_3461 | 0 | 22 | -0.703972 | C-5 cytosine-specific DNA methylase | |
| PputGB1_3462 | 5 | 27 | -2.344696 | hypothetical protein | |
| PputGB1_3463 | 5 | 26 | -1.426119 | hypothetical protein | |
| PputGB1_3464 | 5 | 27 | -1.457659 | hypothetical protein | |
| PputGB1_3465 | 6 | 23 | -0.770738 | hypothetical protein | |
| PputGB1_3466 | 3 | 20 | 0.052800 | hypothetical protein | |
| PputGB1_3467 | 2 | 21 | -0.236342 | hypothetical protein | |
| PputGB1_3468 | 2 | 24 | -2.061638 | hypothetical protein | |
| PputGB1_3469 | 1 | 24 | -3.224606 | hypothetical protein | |
| PputGB1_3470 | 2 | 26 | -3.288109 | hypothetical protein | |
| PputGB1_3471 | 1 | 18 | -1.443944 | phosphoprotein phosphatase | |
| PputGB1_3472 | 2 | 16 | -1.660511 | hypothetical protein | |
| PputGB1_3473 | 2 | 16 | -2.122736 | integrase family protein | |
| PputGB1_3474 | 3 | 20 | -1.731760 | *MerR family transcriptional regulator | |
| PputGB1_3475 | 4 | 21 | -2.186976 | integration host factor subunit alpha | |
| PputGB1_3476 | 3 | 23 | -2.283844 | phenylalanyl-tRNA synthetase subunit beta | |
| PputGB1_3477 | 4 | 20 | -4.028008 | phenylalanyl-tRNA synthetase subunit alpha | |
| PputGB1_3478 | 5 | 21 | -4.854855 | 50S ribosomal protein L20 | |
| PputGB1_3479 | 3 | 18 | -3.976726 | 50S ribosomal protein L35 | |
| PputGB1_3480 | 3 | 18 | -3.429186 | translation initiation factor IF-3 |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_3416 | IGASERPTASE | 29 | 0.017 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_3441 | FbpA_PF05833 | 25 | 0.024 | Fibronectin-binding protein | |
>FbpA_PF05833#Fibronectin-binding protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_3454 | IGASERPTASE | 55 | 2e-10 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_3475 | DNABINDINGHU | 114 | 5e-37 | Prokaryotic integration host factor signature. | |
>DNABINDINGHU#Prokaryotic integration host factor signature. | |||||
| 47 | PputGB1_3561 | PputGB1_3567 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PputGB1_3561 | 2 | 9 | 2.120140 | type 12 methyltransferase | |
| PputGB1_3562 | 2 | 10 | 1.982196 | hypothetical protein | |
| PputGB1_3563 | 3 | 10 | 2.215970 | diguanylate cyclase | |
| PputGB1_3564 | 1 | 10 | 2.234928 | 17 kDa surface antigen | |
| PputGB1_3565 | 2 | 10 | 1.781673 | citrate transporter | |
| PputGB1_3566 | 3 | 11 | 2.120140 | diguanylate cyclase | |
| PputGB1_3567 | 2 | 13 | 1.419047 | hypothetical protein |
| 48 | PputGB1_3608 | PputGB1_3614 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PputGB1_3608 | 2 | 15 | -0.099035 | outer-membrane lipoprotein carrier protein | |
| PputGB1_3609 | 2 | 15 | -0.318437 | cell division protein FtsK | |
| PputGB1_3610 | 2 | 15 | -1.698455 | leucyl/phenylalanyl-tRNA--protein transferase | |
| PputGB1_3611 | 3 | 15 | -1.961381 | arginyl-tRNA-protein transferase | |
| PputGB1_3612 | 2 | 16 | -1.307936 | translation initiation factor IF-1 | |
| PputGB1_3613 | 2 | 17 | -0.901045 | ATP-dependent Clp protease ATP-binding protein | |
| PputGB1_3614 | 2 | 22 | -0.704204 | ATP-dependent Clp protease adaptor protein ClpS |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_3609 | IGASERPTASE | 38 | 2e-04 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| 49 | PputGB1_3756 | PputGB1_3767 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PputGB1_3756 | 2 | 31 | -1.836181 | succinyl-CoA synthetase subunit alpha | |
| PputGB1_3757 | 3 | 30 | -1.797029 | succinyl-CoA synthetase subunit beta | |
| PputGB1_3758 | 3 | 30 | -1.437628 | dihydrolipoamide dehydrogenase | |
| PputGB1_3759 | 3 | 29 | -1.627020 | dihydrolipoamide succinyltransferase | |
| PputGB1_3760 | 4 | 25 | -1.819199 | 2-oxoglutarate dehydrogenase E1 component | |
| PputGB1_3761 | 3 | 23 | -2.359588 | succinate dehydrogenase iron-sulfur subunit | |
| PputGB1_3762 | 3 | 22 | -2.156558 | succinate dehydrogenase flavoprotein subunit | |
| PputGB1_3763 | -1 | 17 | -2.983505 | succinate dehydrogenase, hydrophobic membrane | |
| PputGB1_3764 | -2 | 13 | -2.139493 | succinate dehydrogenase, cytochrome b556 | |
| PputGB1_3765 | -1 | 15 | -1.116911 | type II citrate synthase | |
| PputGB1_3766 | 1 | 19 | -0.804354 | lipid-binding START domain-containing protein | |
| PputGB1_3767 | 2 | 18 | -0.296593 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_3759 | SSBTLNINHBTR | 28 | 0.049 | Streptomyces subtilisin inhibitor signature. | |
>SSBTLNINHBTR#Streptomyces subtilisin inhibitor signature. | |||||
| 50 | PputGB1_3778 | PputGB1_3826 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PputGB1_3778 | 1 | 14 | 3.536452 | major facilitator superfamily transporter | |
| PputGB1_3779 | -1 | 13 | 3.526619 | hypothetical protein | |
| PputGB1_3780 | -2 | 13 | 3.326189 | RNA polymerase sigma factor | |
| PputGB1_3781 | -2 | 12 | 2.979660 | RND family efflux transporter MFP subunit | |
| PputGB1_3782 | -2 | 11 | 2.648411 | ABC transporter-like protein | |
| PputGB1_3783 | -2 | 10 | 2.466200 | RND efflux system outer membrane lipoprotein | |
| PputGB1_3784 | -2 | 11 | 2.237730 | hypothetical protein | |
| PputGB1_3785 | -3 | 12 | 2.209442 | peptidase M19 | |
| PputGB1_3786 | -1 | 15 | 2.627906 | class V aminotransferase | |
| PputGB1_3787 | 0 | 15 | 3.383665 | alpha/beta hydrolase domain-containing protein | |
| PputGB1_3788 | -1 | 12 | 1.470895 | transcription factor jumonji domain-containing | |
| PputGB1_3789 | 0 | 16 | -0.287355 | FAD-binding 9 siderophore-interacting | |
| PputGB1_3790 | 1 | 16 | -1.116430 | diaminobutyrate--2-oxoglutarate | |
| PputGB1_3791 | 1 | 20 | -1.880722 | integral membrane sensor signal transduction | |
| PputGB1_3792 | 2 | 22 | -2.432666 | two component transcriptional regulator | |
| PputGB1_3793 | 2 | 19 | -2.586000 | hypothetical protein | |
| PputGB1_3794 | -1 | 13 | -1.196994 | GAD-like domain-containing protein | |
| PputGB1_3795 | -3 | 12 | 1.284538 | GAD-like domain-containing protein | |
| PputGB1_3796 | -1 | 11 | 2.489942 | hypothetical protein | |
| PputGB1_3797 | -1 | 13 | 2.664318 | hypothetical protein | |
| PputGB1_3798 | -1 | 14 | 2.350302 | gluconate 2-dehydrogenase | |
| PputGB1_3799 | -1 | 12 | 2.330966 | 2Fe-2S iron-sulfur cluster binding | |
| PputGB1_3800 | -1 | 12 | 2.159901 | aldehyde oxidase and xanthine dehydrogenase | |
| PputGB1_3801 | 3 | 15 | 0.376583 | protein-disulfide reductase | |
| PputGB1_3802 | 2 | 25 | -5.026637 | redoxin domain-containing protein | |
| PputGB1_3803 | 3 | 35 | -9.104931 | disulfide isomerase/thiol-disulfide oxidase | |
| PputGB1_3804 | 2 | 10 | 1.138499 | hypothetical protein | |
| PputGB1_3805 | 2 | 10 | 1.051286 | transposase IS3/IS911 family protein | |
| PputGB1_3806 | 2 | 10 | 1.226404 | integrase catalytic subunit | |
| PputGB1_3807 | 2 | 11 | 1.768480 | hypothetical protein | |
| PputGB1_3808 | 2 | 12 | 2.516150 | ABC transporter-like protein | |
| PputGB1_3809 | 3 | 14 | 3.141602 | peptide synthase | |
| PputGB1_3810 | -2 | 16 | 0.440154 | extracytoplasmic-function sigma-70 factor | |
| PputGB1_3811 | -1 | 11 | 0.640753 | siderophore biosynthesis protein | |
| PputGB1_3812 | 0 | 13 | 0.629501 | extracellular solute-binding protein | |
| PputGB1_3813 | 1 | 14 | 0.489801 | exonuclease RNase T and DNA polymerase III | |
| PputGB1_3814 | 0 | 17 | 0.262936 | hypothetical protein | |
| PputGB1_3815 | 2 | 18 | 0.356172 | hypothetical protein | |
| PputGB1_3816 | 3 | 24 | 0.219359 | cbb3-type cytochrome c oxidase subunit I | |
| PputGB1_3817 | 2 | 22 | 0.143163 | cbb3-type cytochrome c oxidase subunit II | |
| PputGB1_3818 | 0 | 19 | -0.174629 | cytochrome c oxidase, cbb3-type, CcoQ subunit | |
| PputGB1_3819 | 0 | 19 | -0.680003 | cytochrome c oxidase, cbb3-type subunit III | |
| PputGB1_3820 | 0 | 19 | -0.723661 | cbb3-type cytochrome c oxidase subunit I | |
| PputGB1_3821 | -2 | 17 | 1.490922 | cbb3-type cytochrome c oxidase subunit II | |
| PputGB1_3822 | -2 | 18 | 1.598411 | cbb3-type cytochrome oxidase subunit | |
| PputGB1_3823 | -1 | 17 | 2.321198 | cytochrome c oxidase, cbb3-type subunit III | |
| PputGB1_3824 | -1 | 18 | 2.376168 | cytochrome c oxidase accessory protein CcoG | |
| PputGB1_3825 | -1 | 17 | 3.058522 | hypothetical protein | |
| PputGB1_3826 | -1 | 16 | 3.012045 | heavy metal translocating P-type ATPase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_3778 | TCRTETB | 34 | 9e-04 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_3779 | HTHFIS | 30 | 0.004 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_3781 | RTXTOXIND | 59 | 2e-11 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_3792 | HTHFIS | 93 | 5e-24 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_3793 | PF07132 | 32 | 0.005 | Harpin protein (HrpN) | |
>PF07132#Harpin protein (HrpN) | |||||
| 51 | PputGB1_3934 | PputGB1_3946 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PputGB1_3934 | -1 | 23 | -4.680255 | sigma-54 dependent trancsriptional regulator | |
| PputGB1_3935 | 0 | 26 | -4.788033 | hypothetical protein | |
| PputGB1_3936 | -1 | 22 | -3.902024 | flagellar protein FliS | |
| PputGB1_3937 | 0 | 18 | -2.593861 | flagellar hook-associated 2 domain-containing | |
| PputGB1_3938 | 0 | 16 | -1.534675 | flagellar protein FlaG protein | |
| PputGB1_3939 | -1 | 15 | -1.113370 | flagellin domain-containing protein | |
| PputGB1_3940 | -1 | 14 | 0.040231 | beta-ketoacyl-acyl-carrier-protein synthase I | |
| PputGB1_3941 | 0 | 13 | 0.099183 | flagellar hook-associated protein FlgL | |
| PputGB1_3942 | 1 | 15 | 0.530046 | flagellar hook-associated protein FlgK | |
| PputGB1_3943 | 2 | 16 | 0.585068 | flagellar rod assembly protein/muramidase FlgJ | |
| PputGB1_3944 | 4 | 18 | -0.000696 | flagellar basal body P-ring protein | |
| PputGB1_3945 | 4 | 16 | -0.893362 | flagellar basal body L-ring protein | |
| PputGB1_3946 | 3 | 18 | -1.283588 | flagellar basal body rod protein FlgG |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_3934 | HTHFIS | 506 | e-179 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_3937 | FLAGELLIN | 30 | 0.015 | Flagellin signature. | |
>FLAGELLIN#Flagellin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_3939 | FLAGELLIN | 179 | 1e-52 | Flagellin signature. | |
>FLAGELLIN#Flagellin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_3941 | FLAGELLIN | 62 | 2e-12 | Flagellin signature. | |
>FLAGELLIN#Flagellin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_3942 | FLGHOOKAP1 | 217 | 9e-65 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_3943 | FLGFLGJ | 146 | 3e-43 | Flagellar protein FlgJ signature. | |
>FLGFLGJ#Flagellar protein FlgJ signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_3944 | FLGPRINGFLGI | 447 | e-160 | Flagellar P-ring protein signature. | |
>FLGPRINGFLGI#Flagellar P-ring protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_3945 | FLGLRINGFLGH | 194 | 1e-64 | Flagellar L-ring protein signature. | |
>FLGLRINGFLGH#Flagellar L-ring protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_3946 | FLGHOOKAP1 | 45 | 2e-07 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
| 52 | PputGB1_4028 | PputGB1_4033 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PputGB1_4028 | 3 | 14 | 1.721484 | LysR family transcriptional regulator | |
| PputGB1_4029 | 4 | 14 | 1.368398 | agmatinase | |
| PputGB1_4030 | 4 | 17 | 1.045861 | Na+/solute symporter | |
| PputGB1_4031 | 2 | 22 | 1.006112 | hypothetical protein | |
| PputGB1_4032 | 2 | 20 | 0.701551 | LysR family transcriptional regulator | |
| PputGB1_4033 | 3 | 22 | -0.440650 | hypothetical protein |
| 53 | PputGB1_4130 | PputGB1_4176 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PputGB1_4130 | -1 | 21 | 3.541597 | LysR family transcriptional regulator | |
| PputGB1_4131 | -2 | 17 | 3.591603 | AraC family transcriptional regulator | |
| PputGB1_4132 | -2 | 16 | 3.566969 | amino acid permease-associated protein | |
| PputGB1_4133 | -1 | 12 | 3.759885 | proline racemase | |
| PputGB1_4134 | -1 | 10 | 3.525716 | dihydrodipicolinate synthetase | |
| PputGB1_4135 | 1 | 10 | 3.247748 | aldehyde dehydrogenase | |
| PputGB1_4136 | -3 | 10 | 1.141972 | FAD dependent oxidoreductase | |
| PputGB1_4137 | -3 | 11 | 0.017938 | NADH:flavin oxidoreductase | |
| PputGB1_4138 | -2 | 12 | -0.888605 | ArsR family transcriptional regulator | |
| PputGB1_4139 | -2 | 13 | -1.387326 | putative transcriptional regulator | |
| PputGB1_4140 | -1 | 16 | -0.950788 | hypothetical protein | |
| PputGB1_4141 | 0 | 16 | -0.909849 | malate:quinone oxidoreductase | |
| PputGB1_4142 | 0 | 17 | -3.962189 | hypothetical protein | |
| PputGB1_4143 | 0 | 17 | -4.222316 | lysine exporter protein LysE/YggA | |
| PputGB1_4144 | 2 | 21 | -4.716560 | hypothetical protein | |
| PputGB1_4145 | 3 | 30 | -6.676657 | hypothetical protein | |
| PputGB1_4146 | 6 | 47 | -10.265440 | SH3 type 3 domain-containing protein | |
| PputGB1_4147 | 7 | 57 | -12.225959 | integrase family protein | |
| PputGB1_4148 | 7 | 59 | -13.298540 | phage transcriptional regulator AlpA | |
| PputGB1_4149 | 7 | 60 | -14.325616 | hypothetical protein | |
| PputGB1_4150 | 7 | 64 | -15.510714 | hypothetical protein | |
| PputGB1_4151 | 8 | 62 | -14.577842 | Sel1 domain-containing protein | |
| PputGB1_4152 | 7 | 59 | -14.512751 | hypothetical protein | |
| PputGB1_4153 | 7 | 61 | -14.507068 | SMC domain-containing protein | |
| PputGB1_4154 | 7 | 59 | -13.263575 | UvrD/REP helicase | |
| PputGB1_4155 | 6 | 56 | -11.602209 | hypothetical protein | |
| PputGB1_4156 | 6 | 52 | -11.287930 | hypothetical protein | |
| PputGB1_4157 | 6 | 53 | -11.743476 | hypothetical protein | |
| PputGB1_4158 | 6 | 56 | -13.229353 | hypothetical protein | |
| PputGB1_4161 | 7 | 57 | -12.561004 | hypothetical protein | |
| PputGB1_4162 | 7 | 58 | -12.922986 | hypothetical protein | |
| PputGB1_4163 | 7 | 60 | -13.710935 | hypothetical protein | |
| PputGB1_4164 | 6 | 60 | -12.983537 | relaxase/mobilization nuclease family protein | |
| PputGB1_4165 | 6 | 60 | -12.578342 | hypothetical protein | |
| PputGB1_4166 | 6 | 61 | -12.558928 | hypothetical protein | |
| PputGB1_4167 | 4 | 63 | -13.873493 | hypothetical protein | |
| PputGB1_4168 | 5 | 66 | -14.090406 | hypothetical protein | |
| PputGB1_4169 | 7 | 64 | -12.410122 | hypothetical protein | |
| PputGB1_4170 | 8 | 63 | -13.160451 | hypothetical protein | |
| PputGB1_4171 | 6 | 61 | -13.230007 | hypothetical protein | |
| PputGB1_4172 | 7 | 55 | -11.880873 | XRE family transcriptional regulator | |
| PputGB1_4173 | 4 | 40 | -10.620283 | cobyrinic acid ac-diamide synthase | |
| PputGB1_4174 | 2 | 28 | -7.342484 | XRE family transcriptional regulator | |
| PputGB1_4175 | 1 | 17 | -4.841038 | hypothetical protein | |
| PputGB1_4176 | 0 | 14 | -3.717195 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_4145 | PF03544 | 46 | 1e-07 | Gram-negative bacterial tonB protein | |
>PF03544#Gram-negative bacterial tonB protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_4146 | TRNSINTIMINR | 29 | 0.035 | Translocated intimin receptor (Tir) signature. | |
>TRNSINTIMINR#Translocated intimin receptor (Tir) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_4152 | PF06776 | 30 | 0.005 | Invasion associated locus B | |
>PF06776#Invasion associated locus B | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_4161 | PYOCINKILLER | 29 | 0.018 | Pyocin S killer protein signature. | |
>PYOCINKILLER#Pyocin S killer protein signature. | |||||
| 54 | PputGB1_4192 | PputGB1_4205 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PputGB1_4192 | 3 | 17 | -2.106673 | *exsB protein | |
| PputGB1_4193 | 3 | 18 | -2.403008 | radical SAM domain-containing protein | |
| PputGB1_4194 | 2 | 17 | -1.886094 | tol-pal system protein YbgF | |
| PputGB1_4195 | 3 | 14 | -1.947011 | peptidoglycan-associated lipoprotein | |
| PputGB1_4196 | 1 | 11 | -1.067691 | translocation protein TolB | |
| PputGB1_4197 | 3 | 10 | -0.656371 | protein TolA | |
| PputGB1_4198 | 1 | 11 | 0.095409 | protein TolR | |
| PputGB1_4199 | 1 | 12 | 0.227498 | protein TolQ | |
| PputGB1_4200 | 3 | 14 | -0.034977 | tol-pal system-associated acyl-CoA thioesterase | |
| PputGB1_4201 | 3 | 16 | 0.101678 | Holliday junction DNA helicase RuvB | |
| PputGB1_4202 | 3 | 17 | -0.271726 | Holliday junction DNA helicase RuvA | |
| PputGB1_4203 | 3 | 17 | -0.765367 | Holliday junction resolvase | |
| PputGB1_4204 | 2 | 16 | -0.903702 | hypothetical protein | |
| PputGB1_4205 | 2 | 16 | -0.996090 | aspartyl-tRNA synthetase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_4194 | INTIMIN | 28 | 0.033 | Intimin signature. | |
>INTIMIN#Intimin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_4195 | OMPADOMAIN | 114 | 3e-33 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_4197 | IGASERPTASE | 65 | 2e-13 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| 55 | PputGB1_4362 | PputGB1_4384 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PputGB1_4362 | 2 | 16 | -3.085603 | ATP-dependent protease La | |
| PputGB1_4363 | 1 | 23 | -4.227652 | putative lipoprotein | |
| PputGB1_4364 | -1 | 21 | -3.826750 | hypothetical protein | |
| PputGB1_4365 | -1 | 14 | -1.855112 | hypothetical protein | |
| PputGB1_4366 | -2 | 10 | 0.468740 | methyltransferase | |
| PputGB1_4367 | 0 | 12 | 1.043482 | methyltransferase | |
| PputGB1_4368 | -1 | 12 | 0.333647 | hypothetical protein | |
| PputGB1_4369 | -1 | 10 | 0.327390 | two component heavy metal response | |
| PputGB1_4370 | 0 | 11 | -0.251753 | heavy metal sensor signal transduction histidine | |
| PputGB1_4371 | 2 | 15 | -1.095099 | pyridoxine 5'-phosphate synthase | |
| PputGB1_4372 | 1 | 18 | -0.983176 | DNA repair protein RecO | |
| PputGB1_4373 | 3 | 16 | -1.435449 | GTP-binding protein Era | |
| PputGB1_4374 | 1 | 14 | -1.196335 | ribonuclease III | |
| PputGB1_4375 | 2 | 14 | -1.720242 | signal peptidase I | |
| PputGB1_4376 | 0 | 10 | -1.291921 | GTP-binding protein LepA | |
| PputGB1_4377 | -1 | 12 | -1.137767 | protease Do | |
| PputGB1_4378 | -1 | 19 | -2.947895 | sigma E regulatory protein MucB/RseB | |
| PputGB1_4379 | 1 | 23 | -4.217919 | anti sigma-E protein, RseA | |
| PputGB1_4380 | 2 | 26 | -4.741611 | RNA polymerase sigma factor AlgU | |
| PputGB1_4381 | 1 | 27 | -3.764909 | L-aspartate oxidase | |
| PputGB1_4382 | 4 | 40 | -5.702338 | hypothetical protein | |
| PputGB1_4383 | 3 | 30 | -3.539745 | hypothetical protein | |
| PputGB1_4384 | 2 | 22 | -1.505432 | integrase family protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_4362 | HTHFIS | 34 | 0.003 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_4364 | STREPTOPAIN | 32 | 0.004 | Streptopain (C10) cysteine protease family signature. | |
>STREPTOPAIN#Streptopain (C10) cysteine protease family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_4369 | HTHFIS | 85 | 2e-21 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_4376 | TCRTETOQM | 148 | 5e-40 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_4377 | V8PROTEASE | 79 | 2e-18 | V8 serine protease family signature. | |
>V8PROTEASE#V8 serine protease family signature. | |||||
| 56 | PputGB1_4519 | PputGB1_4530 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PputGB1_4519 | 4 | 13 | 1.977869 | cell division protein FtsL | |
| PputGB1_4520 | 3 | 13 | 1.780049 | S-adenosyl-methyltransferase MraW | |
| PputGB1_4521 | 1 | 14 | 1.607774 | cell division protein MraZ | |
| PputGB1_4522 | 2 | 17 | 1.863423 | uroporphyrin-III C/tetrapyrrole | |
| PputGB1_4523 | 1 | 21 | 1.206670 | LppC family lipoprotein | |
| PputGB1_4524 | 1 | 16 | -1.879072 | hypothetical protein | |
| PputGB1_4525 | 0 | 14 | -2.626521 | phosphoheptose isomerase | |
| PputGB1_4526 | 1 | 13 | -3.484491 | transport-associated | |
| PputGB1_4527 | 2 | 15 | -3.119106 | hypothetical protein | |
| PputGB1_4528 | 4 | 18 | -3.333605 | ClpXP protease specificity-enhancing factor | |
| PputGB1_4529 | 4 | 20 | -3.710784 | glutathione S-transferase domain-containing | |
| PputGB1_4530 | 3 | 18 | -2.766553 | ubiquinol--cytochrome c reductase, cytochrome |
| 57 | PputGB1_4674 | PputGB1_4687 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PputGB1_4674 | 2 | 17 | -2.856648 | putative sulfite oxidase subunit YedY | |
| PputGB1_4675 | 2 | 18 | -1.676103 | CDP-diacylglycerol--serine | |
| PputGB1_4676 | 1 | 18 | -0.988415 | ketol-acid reductoisomerase | |
| PputGB1_4677 | -1 | 11 | -0.531393 | acetolactate synthase 3 regulatory subunit | |
| PputGB1_4678 | -2 | 11 | -0.497123 | acetolactate synthase 3 catalytic subunit | |
| PputGB1_4679 | -2 | 9 | 0.561064 | hypothetical protein | |
| PputGB1_4680 | -1 | 9 | 0.966403 | hypothetical protein | |
| PputGB1_4681 | 0 | 10 | 0.908534 | penicillin-binding protein 1B | |
| PputGB1_4682 | 5 | 15 | 1.609496 | hypothetical protein | |
| PputGB1_4683 | 7 | 20 | 2.582104 | TfoX domain-containing protein | |
| PputGB1_4684 | 6 | 20 | 2.973728 | hypothetical protein | |
| PputGB1_4685 | 3 | 16 | 3.236698 | hemin importer ATP-binding subunit | |
| PputGB1_4686 | 2 | 12 | 2.419061 | transport system permease | |
| PputGB1_4687 | 2 | 10 | 2.117627 | periplasmic binding protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_4678 | BLACTAMASEA | 31 | 0.015 | Beta-lactamase class A signature. | |
>BLACTAMASEA#Beta-lactamase class A signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_4681 | RTXTOXIND | 31 | 0.016 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_4687 | FERRIBNDNGPP | 51 | 1e-09 | Ferrichrome-binding periplasmic protein signature. | |
>FERRIBNDNGPP#Ferrichrome-binding periplasmic protein signature. | |||||
| 58 | PputGB1_4739 | PputGB1_4756 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PputGB1_4739 | 0 | 28 | -4.775648 | hypothetical protein | |
| PputGB1_4740 | 0 | 30 | -5.554695 | integrase family protein | |
| PputGB1_4741 | 4 | 31 | -5.669396 | hypothetical protein | |
| PputGB1_4742 | 5 | 33 | -6.370865 | hypothetical protein | |
| PputGB1_4743 | 6 | 34 | -7.530231 | phage-like protein endonuclease-like protein | |
| PputGB1_4744 | 7 | 38 | -8.104446 | hypothetical protein | |
| PputGB1_4745 | 8 | 41 | -7.731623 | DNA repair protein RadC | |
| PputGB1_4746 | 8 | 42 | -6.970605 | restriction endonuclease EcoRII | |
| PputGB1_4747 | 5 | 42 | -7.093821 | DNA mismatch endonuclease Vsr | |
| PputGB1_4748 | 4 | 46 | -6.946500 | DNA cytosine methylase | |
| PputGB1_4749 | 5 | 51 | -6.847624 | transposase-like protein TnpA3 | |
| PputGB1_4750 | 5 | 51 | -7.001205 | HNH endonuclease | |
| PputGB1_4751 | 4 | 51 | -9.964081 | hypothetical protein | |
| PputGB1_4752 | 3 | 40 | -8.255390 | hypothetical protein | |
| PputGB1_4753 | 4 | 32 | -7.758388 | non-specific serine/threonine protein kinase | |
| PputGB1_4754 | 4 | 25 | -7.622855 | transposase | |
| PputGB1_4755 | 3 | 22 | -6.754997 | phage transcriptional regulator AlpA | |
| PputGB1_4756 | 1 | 16 | -5.378658 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_4741 | PHAGEIV | 27 | 0.012 | Gene IV protein signature. | |
>PHAGEIV#Gene IV protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_4749 | PF06917 | 27 | 0.042 | Periplasmic pectate lyase | |
>PF06917#Periplasmic pectate lyase | |||||
| 59 | PputGB1_4783 | PputGB1_4826 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PputGB1_4783 | 1 | 20 | -4.367248 | putative periplasmic ligand-binding sensor | |
| PputGB1_4784 | 2 | 23 | -5.423257 | hypothetical protein | |
| PputGB1_4785 | 4 | 32 | -7.521884 | hypothetical protein | |
| PputGB1_4786 | 4 | 33 | -7.710570 | ATP-dependent helicase HrpB | |
| PputGB1_4787 | 5 | 40 | -10.624244 | hypothetical protein | |
| PputGB1_4788 | 4 | 38 | -9.871448 | integrase family protein | |
| PputGB1_4789 | 5 | 39 | -9.539119 | hypothetical protein | |
| PputGB1_4790 | 5 | 47 | -11.212303 | integrase family protein | |
| PputGB1_4791 | 4 | 47 | -10.461928 | ISPsy5, transposase | |
| PputGB1_4792 | 3 | 47 | -9.683383 | transposase IS66 | |
| PputGB1_4793 | 6 | 61 | -11.918813 | IS66 Orf2 family protein | |
| PputGB1_4794 | 7 | 59 | -12.603711 | hypothetical protein | |
| PputGB1_4795 | 7 | 62 | -13.049285 | RES domain-containing protein | |
| PputGB1_4796 | 7 | 54 | -11.185404 | hypothetical protein | |
| PputGB1_4797 | 6 | 50 | -9.968657 | hypothetical protein | |
| PputGB1_4798 | 6 | 50 | -10.840198 | hypothetical protein | |
| PputGB1_4799 | 6 | 49 | -10.637062 | hypothetical protein | |
| PputGB1_4800 | 3 | 45 | -8.176970 | hypothetical protein | |
| PputGB1_4801 | 3 | 40 | -7.713337 | hypothetical protein | |
| PputGB1_4802 | 4 | 42 | -7.896211 | XRE family transcriptional regulator | |
| PputGB1_4803 | 5 | 45 | -6.061718 | hypothetical protein | |
| PputGB1_4804 | 5 | 44 | -6.252595 | hypothetical protein | |
| PputGB1_4805 | 5 | 45 | -6.262807 | metallophosphoesterase | |
| PputGB1_4806 | 5 | 47 | -6.451680 | hypothetical protein | |
| PputGB1_4807 | 5 | 49 | -6.215870 | Fis family transcriptional regulator | |
| PputGB1_4808 | 5 | 49 | -6.116790 | ATP-dependent helicase HrpB | |
| PputGB1_4809 | 3 | 52 | -6.960866 | hypothetical protein | |
| PputGB1_4810 | 4 | 47 | -6.786056 | hypothetical protein | |
| PputGB1_4811 | 4 | 50 | -8.823816 | hypothetical protein | |
| PputGB1_4812 | 4 | 49 | -8.684589 | hypothetical protein | |
| PputGB1_4813 | 4 | 49 | -8.454138 | hypothetical protein | |
| PputGB1_4814 | 5 | 51 | -9.711019 | hypothetical protein | |
| PputGB1_4815 | 4 | 51 | -12.047265 | KAP P-loop domain-containing protein | |
| PputGB1_4816 | 3 | 50 | -12.568043 | hypothetical protein | |
| PputGB1_4817 | 2 | 47 | -10.807883 | transposase IS4 family protein | |
| PputGB1_4818 | 2 | 47 | -10.807883 | ISPs1, transposase OrfA | |
| PputGB1_4819 | 3 | 45 | -9.668478 | hypothetical protein | |
| PputGB1_4820 | 2 | 38 | -7.779865 | PAS/PAC sensor-containing diguanylate | |
| PputGB1_4823 | -1 | 20 | -1.877367 | transposase IS4 family protein | |
| PputGB1_4824 | 1 | 20 | 0.110881 | ISPs1, transposase OrfA | |
| PputGB1_4825 | 2 | 15 | 0.412121 | transposase IS4 family protein | |
| PputGB1_4826 | 2 | 14 | 0.805613 | DEAD/DEAH box helicase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_4783 | IGASERPTASE | 31 | 0.005 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_4799 | OMPTIN | 32 | 0.010 | Omptin serine protease signature. | |
>OMPTIN#Omptin serine protease signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_4800 | BACINVASINB | 27 | 0.024 | Salmonella/Shigella invasin protein B signature. | |
>BACINVASINB#Salmonella/Shigella invasin protein B signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_4807 | HTHFIS | 31 | 0.001 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_4814 | PF03544 | 36 | 1e-04 | Gram-negative bacterial tonB protein | |
>PF03544#Gram-negative bacterial tonB protein | |||||
| 60 | PputGB1_4881 | PputGB1_4888 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PputGB1_4881 | 0 | 11 | 3.477337 | hypothetical protein | |
| PputGB1_4882 | 1 | 11 | 4.630576 | precorrin-3B C(17)-methyltransferase | |
| PputGB1_4883 | 1 | 12 | 4.916378 | precorrin-2 C(20)-methyltransferase | |
| PputGB1_4884 | 2 | 12 | 4.949130 | precorrin-8X methylmutase | |
| PputGB1_4885 | 2 | 11 | 4.467392 | precorrin-3B synthase | |
| PputGB1_4886 | 1 | 12 | 3.971992 | precorrin-6y C5,15-methyltransferase subunit | |
| PputGB1_4887 | 2 | 14 | 2.742072 | cobalt-precorrin-6A synthase | |
| PputGB1_4888 | 3 | 13 | 2.074973 | cobalt-precorrin-6x reductase |
| 61 | PputGB1_5089 | PputGB1_5104 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PputGB1_5089 | -2 | 18 | -4.442747 | hypothetical protein | |
| PputGB1_5090 | 0 | 21 | -5.490485 | fructose-1,6-bisphosphatase | |
| PputGB1_5091 | 2 | 20 | -5.510897 | glycogen/starch/alpha-glucan phosphorylase | |
| PputGB1_5092 | 3 | 19 | -6.494569 | hypothetical protein | |
| PputGB1_5093 | 4 | 20 | -6.029515 | hypothetical protein | |
| PputGB1_5094 | 3 | 19 | -4.783283 | hypothetical protein | |
| PputGB1_5095 | 3 | 21 | -2.892034 | hypothetical protein | |
| PputGB1_5096 | 3 | 21 | -1.465177 | GTP-binding protein TypA | |
| PputGB1_5097 | 1 | 14 | -0.624616 | thiamine biosynthesis protein ThiI | |
| PputGB1_5098 | 0 | 12 | -0.147647 | glutamine synthetase, type I | |
| PputGB1_5099 | 0 | 11 | 0.741047 | chorismate mutase | |
| PputGB1_5100 | 0 | 13 | 0.884221 | signal transduction histidine kinase, nitrogen | |
| PputGB1_5101 | -1 | 13 | 0.571817 | nitrogen metabolism transcriptional regulator | |
| PputGB1_5102 | 1 | 16 | 0.045438 | hypothetical protein | |
| PputGB1_5103 | 3 | 16 | 0.079374 | RNA methyltransferase | |
| PputGB1_5104 | 3 | 19 | 0.591710 | preprotein translocase subunit SecB |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_5096 | TCRTETOQM | 171 | 5e-48 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_5101 | HTHFIS | 555 | 0.0 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_5104 | SECBCHAPRONE | 210 | 7e-73 | Bacterial protein-transport SecB chaperone protein ... | |
>SECBCHAPRONE#Bacterial protein-transport SecB chaperone protein | |||||
| 62 | PputGB1_0015 | PputGB1_0024 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PputGB1_0015 | 4 | 30 | -5.657247 | copper resistance B | |
| PputGB1_0016 | 5 | 33 | -5.981289 | hypothetical protein | |
| PputGB1_0017 | 3 | 36 | -5.288217 | CopA family copper resistance protein | |
| PputGB1_0018 | 2 | 42 | -4.832336 | hypothetical protein | |
| PputGB1_0019 | 2 | 39 | -4.677112 | two component heavy metal response | |
| PputGB1_0020 | 2 | 39 | -4.583689 | heavy metal sensor signal transduction histidine | |
| PputGB1_0021 | 1 | 39 | -4.347522 | hypothetical protein | |
| PputGB1_0022 | 1 | 38 | -4.375300 | outer membrane efflux protein | |
| PputGB1_0023 | 2 | 35 | -4.620531 | RND family efflux transporter MFP subunit | |
| PputGB1_0024 | 2 | 33 | -4.876370 | CzcA family heavy metal efflux protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_0015 | CHLAMIDIAOMP | 31 | 0.007 | Chlamydia major outer membrane protein signature. | |
>CHLAMIDIAOMP#Chlamydia major outer membrane protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_0017 | ICENUCLEATIN | 43 | 4e-06 | Ice nucleation protein signature. | |
>ICENUCLEATIN#Ice nucleation protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_0019 | HTHFIS | 92 | 7e-24 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_0020 | PF06580 | 29 | 0.027 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_0022 | RTXTOXIND | 32 | 0.005 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_0023 | RTXTOXIND | 47 | 1e-07 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_0024 | ACRIFLAVINRP | 669 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| 63 | PputGB1_0057 | PputGB1_0061 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PputGB1_0057 | 2 | 27 | -5.270659 | CzcA family heavy metal efflux protein | |
| PputGB1_0058 | 3 | 33 | -6.743618 | RND family efflux transporter MFP subunit | |
| PputGB1_0059 | 2 | 40 | -8.180225 | outer membrane efflux protein | |
| PputGB1_0060 | 4 | 42 | -9.939942 | outer membrane porin | |
| PputGB1_0061 | 6 | 51 | -10.423759 | two component heavy metal response |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_0057 | ACRIFLAVINRP | 807 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_0058 | RTXTOXIND | 47 | 8e-08 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_0059 | IGASERPTASE | 32 | 0.008 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_0061 | HTHFIS | 77 | 1e-18 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 64 | PputGB1_0179 | PputGB1_0186 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PputGB1_0179 | 0 | 13 | -0.697269 | anti-FecI sigma factor FecR | |
| PputGB1_0180 | 1 | 9 | -0.099670 | ECF subfamily RNA polymerase sigma-24 factor | |
| PputGB1_0181 | 9 | 22 | -1.819500 | GntR family transcriptional regulator | |
| PputGB1_0182 | 9 | 22 | -1.838748 | hypothetical protein | |
| PputGB1_0183 | 9 | 22 | -1.723765 | diguanylate cyclase/phosphodiesterase | |
| PputGB1_0184 | 10 | 22 | -1.895688 | HlyD family type I secretion membrane fusion | |
| PputGB1_0185 | 10 | 22 | -1.896084 | type I secretion system ATPase | |
| PputGB1_0186 | 11 | 22 | -2.167708 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_0179 | TYPE3OMGPROT | 30 | 0.015 | Type III secretion system outer membrane G protein ... | |
>TYPE3OMGPROT#Type III secretion system outer membrane G protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_0180 | PF00577 | 29 | 0.008 | Outer membrane usher protein FimD | |
>PF00577#Outer membrane usher protein FimD | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_0184 | RTXTOXIND | 318 | e-106 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_0186 | CABNDNGRPT | 93 | 5e-21 | NodO calcium binding signature. | |
>CABNDNGRPT#NodO calcium binding signature. | |||||
| 65 | PputGB1_0360 | PputGB1_0366 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PputGB1_0360 | -2 | 14 | 1.334392 | DNA-binding response regulator CreB | |
| PputGB1_0361 | 0 | 14 | 1.575711 | sensory histidine kinase CreC | |
| PputGB1_0362 | -1 | 21 | 0.668876 | hypothetical protein | |
| PputGB1_0363 | -1 | 20 | 1.418876 | glutathione S-transferase domain-containing | |
| PputGB1_0364 | -1 | 21 | 1.632810 | methionine sulfoxide reductase A | |
| PputGB1_0365 | -1 | 19 | 1.733682 | PAS/PAC/GAF sensor-containing diguanylate | |
| PputGB1_0366 | -1 | 18 | 1.599240 | dihydrolipoamide acetyltransferase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_0360 | HTHFIS | 71 | 2e-16 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_0361 | PF06580 | 36 | 3e-04 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_0365 | PRTACTNFAMLY | 31 | 0.033 | Pertactin virulence factor family signature. | |
>PRTACTNFAMLY#Pertactin virulence factor family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_0366 | RTXTOXIND | 32 | 0.008 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| 66 | PputGB1_0653 | PputGB1_0657 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PputGB1_0653 | 1 | 27 | 0.464853 | type IV pili biogenesis protein FimT | |
| PputGB1_0654 | -1 | 20 | 2.114780 | hypothetical protein | |
| PputGB1_0655 | -2 | 13 | 2.717716 | hypothetical protein | |
| PputGB1_0656 | -2 | 12 | 3.144302 | hypothetical protein | |
| PputGB1_0657 | -2 | 11 | 3.261260 | type IV pili biogenesis protein PilE |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_0653 | BCTERIALGSPH | 33 | 2e-04 | Bacterial general secretion pathway protein H signa... | |
>BCTERIALGSPH#Bacterial general secretion pathway protein H | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_0655 | BCTERIALGSPH | 28 | 0.018 | Bacterial general secretion pathway protein H signa... | |
>BCTERIALGSPH#Bacterial general secretion pathway protein H | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_0656 | BCTERIALGSPG | 28 | 0.012 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_0657 | BCTERIALGSPG | 43 | 3e-08 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
| 67 | PputGB1_0722 | PputGB1_0741 | N ![]() | Y ![]() | Y | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PputGB1_0722 | 2 | 20 | 1.523707 | GTPase ObgE | |
| PputGB1_0723 | 1 | 18 | 2.105546 | gamma-glutamyl kinase | |
| PputGB1_0724 | 2 | 18 | 1.186604 | CreA family protein | |
| PputGB1_0725 | 2 | 17 | 1.278993 | hypothetical protein | |
| PputGB1_0726 | 0 | 16 | 1.728805 | hypothetical protein | |
| PputGB1_0727 | 0 | 14 | 1.342101 | hypothetical protein | |
| PputGB1_0728 | 1 | 15 | 0.458920 | hypothetical protein | |
| PputGB1_0729 | 0 | 16 | 0.059753 | ribosomal-protein-alanine acetyltransferase | |
| PputGB1_0730 | 0 | 14 | 0.603432 | hypothetical protein | |
| PputGB1_0731 | 1 | 14 | 0.888463 | LysR family transcriptional regulator | |
| PputGB1_0732 | 1 | 14 | 0.969861 | lysine exporter protein LysE/YggA | |
| PputGB1_0733 | 1 | 13 | 1.661565 | hypothetical protein | |
| PputGB1_0734 | 0 | 14 | 1.937215 | *anti-FecI sigma factor FecR | |
| PputGB1_0735 | -1 | 13 | 2.379520 | major facilitator superfamily transporter | |
| PputGB1_0736 | 1 | 10 | 2.425063 | major facilitator superfamily transporter | |
| PputGB1_0737 | 0 | 8 | 2.699836 | anti-FecI sigma factor FecR | |
| PputGB1_0738 | -1 | 8 | 2.632291 | ECF subfamily RNA polymerase sigma-24 factor | |
| PputGB1_0739 | -1 | 8 | 2.501602 | DNA-3-methyladenine glycosylase II | |
| PputGB1_0740 | 0 | 10 | 2.353336 | AraC family transcriptional regulator | |
| PputGB1_0741 | 0 | 9 | 2.217606 | mechanosensitive ion channel protein MscS |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_0722 | PF07201 | 29 | 0.023 | Hypersensitivity response secretion protein HrpJ | |
>PF07201#Hypersensitivity response secretion protein HrpJ | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_0723 | CARBMTKINASE | 43 | 9e-07 | Bacterial carbamate kinase signature. | |
>CARBMTKINASE#Bacterial carbamate kinase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_0725 | CHANLCOLICIN | 39 | 9e-05 | Channel forming colicin signature. | |
>CHANLCOLICIN#Channel forming colicin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_0729 | SACTRNSFRASE | 31 | 8e-04 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_0734 | TYPE3OMGPROT | 31 | 0.004 | Type III secretion system outer membrane G protein ... | |
>TYPE3OMGPROT#Type III secretion system outer membrane G protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_0735 | TCRTETA | 37 | 1e-04 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_0736 | TCRTETA | 44 | 9e-07 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_0741 | PF07201 | 30 | 0.031 | Hypersensitivity response secretion protein HrpJ | |
>PF07201#Hypersensitivity response secretion protein HrpJ | |||||
| 68 | PputGB1_0809 | PputGB1_0815 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PputGB1_0809 | -3 | 8 | 0.713100 | response regulator receiver protein | |
| PputGB1_0810 | -1 | 9 | 1.290700 | histidine kinase | |
| PputGB1_0811 | -2 | 9 | 1.319753 | beta-lactamase domain-containing protein | |
| PputGB1_0812 | -4 | 8 | 1.519054 | OmpA/MotB domain-containing protein | |
| PputGB1_0813 | -3 | 9 | 0.896646 | phosphate acetyltransferase | |
| PputGB1_0814 | -2 | 10 | -0.300371 | hypothetical protein | |
| PputGB1_0815 | -2 | 11 | -0.438920 | FKBP-type peptidylprolyl isomerase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_0809 | HTHFIS | 55 | 5e-10 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_0810 | PF06580 | 32 | 0.001 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_0812 | OMPADOMAIN | 104 | 1e-28 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_0815 | INFPOTNTIATR | 28 | 0.023 | Macrophage infectivity potentiator signature. | |
>INFPOTNTIATR#Macrophage infectivity potentiator signature. | |||||
| 69 | PputGB1_0836 | PputGB1_0846 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PputGB1_0836 | 0 | 15 | 1.980423 | two component heavy metal response | |
| PputGB1_0837 | 0 | 16 | 2.090817 | acriflavin resistance protein | |
| PputGB1_0838 | -1 | 15 | 2.889238 | RND family efflux transporter MFP subunit | |
| PputGB1_0839 | -1 | 16 | 3.215091 | hypothetical protein | |
| PputGB1_0840 | 5 | 13 | 3.860180 | hypothetical protein | |
| PputGB1_0841 | 4 | 13 | 3.946572 | response regulator receiver modulated CheW | |
| PputGB1_0842 | 4 | 13 | 3.846379 | HlyD family type I secretion membrane fusion | |
| PputGB1_0843 | 5 | 12 | 3.855637 | type I secretion system ATPase | |
| PputGB1_0844 | 5 | 13 | 3.357741 | TolC family type I secretion outer membrane | |
| PputGB1_0845 | 5 | 13 | 2.620041 | hypothetical protein | |
| PputGB1_0846 | -1 | 14 | -1.444492 | anaerobic nitric oxide reductase transcriptional |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_0836 | HTHFIS | 81 | 4e-20 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_0837 | ACRIFLAVINRP | 785 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_0838 | RTXTOXIND | 58 | 2e-11 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_0841 | HTHFIS | 59 | 7e-12 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_0842 | RTXTOXIND | 261 | 3e-85 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_0845 | RTXTOXINA | 50 | 3e-07 | Gram-negative bacterial RTX toxin determinant A family... | |
>RTXTOXINA#Gram-negative bacterial RTX toxin determinant A family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_0846 | HTHFIS | 382 | e-130 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 70 | PputGB1_1043 | PputGB1_1053 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PputGB1_1043 | 2 | 13 | 2.908727 | general secretion pathway protein D | |
| PputGB1_1044 | 5 | 13 | 3.949665 | type II secretion system protein E | |
| PputGB1_1045 | 6 | 12 | 3.923259 | general secretion pathway protein F | |
| PputGB1_1046 | 6 | 14 | 3.850337 | general secretion pathway protein G | |
| PputGB1_1047 | 9 | 19 | 4.313580 | general secretion pathway protein H | |
| PputGB1_1048 | 4 | 14 | 2.250120 | type II secretion system protein I/J | |
| PputGB1_1049 | 2 | 13 | 1.970452 | type II secretion system protein J | |
| PputGB1_1050 | 1 | 13 | 1.588278 | general secretion pathway protein L | |
| PputGB1_1051 | -1 | 14 | 0.966640 | type II secretion system protein M | |
| PputGB1_1052 | -2 | 13 | 0.551116 | type II secretion system protein N | |
| PputGB1_1053 | -3 | 13 | 0.209246 | filamentous hemagglutinin outer membrane |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_1043 | BCTERIALGSPD | 474 | e-163 | Bacterial general secretion pathway protein D signa... | |
>BCTERIALGSPD#Bacterial general secretion pathway protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_1045 | BCTERIALGSPF | 452 | e-161 | Bacterial general secretion pathway protein F signa... | |
>BCTERIALGSPF#Bacterial general secretion pathway protein F | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_1046 | BCTERIALGSPG | 218 | 7e-77 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_1047 | BCTERIALGSPH | 42 | 9e-08 | Bacterial general secretion pathway protein H signa... | |
>BCTERIALGSPH#Bacterial general secretion pathway protein H | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_1048 | BCTERIALGSPG | 29 | 0.002 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_1053 | PF05860 | 85 | 1e-21 | haemagglutination activity domain. | |
>PF05860#haemagglutination activity domain. | |||||
| 71 | PputGB1_1097 | PputGB1_1102 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PputGB1_1097 | -1 | 12 | 1.420286 | CheA signal transduction histidine kinase | |
| PputGB1_1098 | -1 | 15 | 0.457671 | chemotaxis-specific methylesterase | |
| PputGB1_1099 | 1 | 19 | -0.091820 | response regulator receiver modulated | |
| PputGB1_1100 | 0 | 17 | 0.022383 | peptide chain release factor 2 | |
| PputGB1_1101 | -1 | 17 | 0.169495 | lysyl-tRNA synthetase | |
| PputGB1_1102 | -1 | 16 | 0.737019 | TetR family transcriptional regulator |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_1097 | HTHFIS | 73 | 2e-15 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_1098 | HTHFIS | 48 | 3e-08 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_1099 | HTHFIS | 61 | 2e-12 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_1102 | HTHTETR | 51 | 5e-10 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| 72 | PputGB1_1119 | PputGB1_1125 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PputGB1_1119 | -3 | 14 | 1.941722 | TetR family transcriptional regulator | |
| PputGB1_1120 | -3 | 14 | 1.828410 | hypothetical protein | |
| PputGB1_1121 | -3 | 15 | 2.046560 | type 2 acyl-CoA dehydrogenase | |
| PputGB1_1122 | -3 | 16 | 2.010468 | RND family efflux transporter MFP subunit | |
| PputGB1_1123 | -3 | 15 | 1.025934 | acriflavin resistance protein | |
| PputGB1_1124 | -2 | 17 | 1.520716 | hypothetical protein | |
| PputGB1_1125 | -1 | 17 | 2.023104 | lipoprotein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_1119 | HTHTETR | 68 | 2e-16 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_1122 | RTXTOXIND | 54 | 3e-10 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_1123 | ACRIFLAVINRP | 482 | e-156 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_1125 | FRAGILYSIN | 28 | 0.008 | Fragilysin metallopeptidase (M10C) enterotoxin signat... | |
>FRAGILYSIN#Fragilysin metallopeptidase (M10C) enterotoxin | |||||
| 73 | PputGB1_1252 | PputGB1_1259 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PputGB1_1252 | 1 | 10 | 1.596342 | multi-sensor hybrid histidine kinase | |
| PputGB1_1253 | -1 | 11 | 1.122078 | two component transcriptional regulator | |
| PputGB1_1254 | -2 | 11 | 1.048978 | integral membrane sensor signal transduction | |
| PputGB1_1255 | -2 | 10 | 0.182622 | cysteine synthase B | |
| PputGB1_1256 | -1 | 9 | 0.018345 | 23S rRNA 5-methyluridine methyltransferase | |
| PputGB1_1257 | -1 | 10 | -0.560257 | (p)ppGpp synthetase I SpoT/RelA | |
| PputGB1_1258 | 0 | 16 | -0.599724 | nucleoside triphosphate pyrophosphohydrolase | |
| PputGB1_1259 | -1 | 17 | 0.555622 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_1252 | HTHFIS | 73 | 2e-15 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_1253 | HTHFIS | 89 | 2e-22 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_1254 | PF06580 | 31 | 0.013 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_1259 | IGASERPTASE | 30 | 0.006 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| 74 | PputGB1_1291 | PputGB1_1295 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PputGB1_1291 | -1 | 15 | 2.125085 | hypothetical protein | |
| PputGB1_1292 | -1 | 17 | 1.892657 | integral membrane sensor hybrid histidine | |
| PputGB1_1293 | -1 | 14 | 1.317552 | major facilitator superfamily transporter | |
| PputGB1_1294 | -1 | 14 | 1.027880 | GntR family transcriptional regulator | |
| PputGB1_1295 | -1 | 13 | 0.520935 | major facilitator superfamily transporter |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_1291 | RTXTOXIND | 41 | 9e-06 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_1292 | HTHFIS | 59 | 6e-11 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_1293 | TCRTETA | 57 | 4e-11 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_1295 | TCRTETB | 49 | 1e-08 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| 75 | PputGB1_1326 | PputGB1_1333 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PputGB1_1326 | -1 | 13 | 1.466851 | septum formation inhibitor | |
| PputGB1_1327 | 0 | 14 | 1.779009 | lipid A biosynthesis lauroyl acyltransferase | |
| PputGB1_1328 | 0 | 14 | 1.028397 | patatin | |
| PputGB1_1329 | -1 | 12 | -0.070724 | VacJ family lipoprotein | |
| PputGB1_1330 | -3 | 12 | -0.054964 | hypothetical protein | |
| PputGB1_1331 | -3 | 12 | -0.118733 | hypothetical protein | |
| PputGB1_1332 | -3 | 13 | 0.247597 | beta (1-6) glucans synthase | |
| PputGB1_1333 | -1 | 16 | -1.048089 | substrate-binding region of ABC-type glycine |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_1326 | TONBPROTEIN | 34 | 3e-04 | Gram-negative bacterial tonB protein signature. | |
>TONBPROTEIN#Gram-negative bacterial tonB protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_1327 | PF07520 | 32 | 0.003 | Virulence protein SrfB | |
>PF07520#Virulence protein SrfB | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_1329 | VACJLIPOPROT | 186 | 1e-60 | VacJ lipoprotein signature. | |
>VACJLIPOPROT#VacJ lipoprotein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_1333 | INTIMIN | 28 | 0.040 | Intimin signature. | |
>INTIMIN#Intimin signature. | |||||
| 76 | PputGB1_1373 | PputGB1_1381 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PputGB1_1373 | 1 | 28 | -5.409246 | polysaccharide biosynthesis protein CapD | |
| PputGB1_1374 | -1 | 25 | -4.754361 | NAD-dependent epimerase/dehydratase | |
| PputGB1_1375 | -1 | 22 | -4.341229 | UDP-N-acetylglucosamine 2-epimerase | |
| PputGB1_1376 | -1 | 20 | -3.106676 | glycosyl transferase group 1 protein | |
| PputGB1_1377 | 0 | 17 | -2.787915 | NAD-dependent epimerase/dehydratase | |
| PputGB1_1378 | -1 | 21 | -4.816815 | glycosyl transferase family protein | |
| PputGB1_1379 | 0 | 27 | -6.526807 | polysaccharide biosynthesis protein CapD | |
| PputGB1_1380 | 2 | 38 | -8.446620 | dTDP-glucose 4,6-dehydratase | |
| PputGB1_1381 | 3 | 49 | -11.235448 | dTDP-4-dehydrorhamnose reductase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_1373 | NUCEPIMERASE | 68 | 7e-15 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_1374 | NUCEPIMERASE | 71 | 1e-15 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_1377 | NUCEPIMERASE | 83 | 3e-20 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_1379 | NUCEPIMERASE | 61 | 6e-12 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_1380 | NUCEPIMERASE | 183 | 3e-57 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_1381 | NUCEPIMERASE | 45 | 2e-07 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| 77 | PputGB1_1505 | PputGB1_1509 | N ![]() | Y ![]() | Y | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PputGB1_1505 | -1 | 13 | 0.575816 | excinuclease ABC subunit B | |
| PputGB1_1506 | -1 | 11 | 0.835335 | EmrB/QacA family drug resistance transporter | |
| PputGB1_1507 | -2 | 12 | 1.941535 | secretion protein HlyD family protein | |
| PputGB1_1508 | -1 | 14 | 1.401352 | glutamyl-tRNA synthetase | |
| PputGB1_1509 | -1 | 12 | 2.055402 | ******TetR family transcriptional regulator |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_1505 | RTXTOXIND | 30 | 0.035 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_1506 | TCRTETB | 104 | 4e-26 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_1507 | RTXTOXIND | 149 | 2e-43 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_1509 | HTHTETR | 50 | 6e-10 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| 78 | PputGB1_1600 | PputGB1_1604 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PputGB1_1600 | 2 | 16 | 1.956917 | OmpF family protein | |
| PputGB1_1601 | 2 | 12 | 2.678091 | uroporphyrin-III C-methyltransferase | |
| PputGB1_1602 | 1 | 12 | 2.195555 | protein serine/threonine phosphatase | |
| PputGB1_1603 | -2 | 9 | 1.660387 | nitrite transporter | |
| PputGB1_1604 | -3 | 8 | 1.637615 | response regulator receiver/ANTAR |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_1600 | OMPADOMAIN | 133 | 2e-38 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_1602 | YERSSTKINASE | 41 | 1e-05 | Yersinia serine/threonine protein kinase signature. | |
>YERSSTKINASE#Yersinia serine/threonine protein kinase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_1603 | TCRTETB | 39 | 3e-05 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_1604 | HTHFIS | 50 | 1e-09 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 79 | PputGB1_1904 | PputGB1_1911 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PputGB1_1904 | 3 | 9 | -1.342673 | ATP-dependent protease La | |
| PputGB1_1905 | 1 | 12 | -0.965546 | histone family protein DNA-binding protein | |
| PputGB1_1906 | 1 | 11 | -0.600882 | PpiC-type peptidyl-prolyl cis-trans isomerase | |
| PputGB1_1907 | 1 | 13 | 0.347887 | patatin | |
| PputGB1_1908 | 4 | 13 | 1.127547 | lipoprotein | |
| PputGB1_1909 | 3 | 12 | 1.484429 | CHAD domain-containing protein | |
| PputGB1_1910 | 1 | 10 | 1.134307 | acyl-CoA thioesterase II | |
| PputGB1_1911 | 1 | 9 | 1.345350 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_1904 | PF05272 | 31 | 0.018 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_1905 | DNABINDINGHU | 120 | 8e-40 | Prokaryotic integration host factor signature. | |
>DNABINDINGHU#Prokaryotic integration host factor signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_1906 | 2FE2SRDCTASE | 31 | 0.012 | Ferric iron reductase signature. | |
>2FE2SRDCTASE#Ferric iron reductase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_1911 | ACRIFLAVINRP | 31 | 0.001 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| 80 | PputGB1_1967 | PputGB1_1971 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PputGB1_1967 | 0 | 14 | 1.489722 | AraC family transcriptional regulator | |
| PputGB1_1968 | -2 | 14 | 1.727393 | major facilitator superfamily transporter | |
| PputGB1_1969 | -2 | 16 | 0.279377 | hypothetical protein | |
| PputGB1_1970 | -3 | 12 | -0.306550 | VacJ family lipoprotein | |
| PputGB1_1971 | -2 | 24 | -1.817482 | two component transcriptional regulator |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_1967 | PRTACTNFAMLY | 28 | 0.040 | Pertactin virulence factor family signature. | |
>PRTACTNFAMLY#Pertactin virulence factor family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_1968 | TCRTETA | 39 | 4e-05 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_1970 | VACJLIPOPROT | 185 | 3e-60 | VacJ lipoprotein signature. | |
>VACJLIPOPROT#VacJ lipoprotein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_1971 | HTHFIS | 85 | 3e-21 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 81 | PputGB1_2007 | PputGB1_2013 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PputGB1_2007 | 3 | 15 | 2.293040 | integral membrane sensor signal transduction | |
| PputGB1_2008 | 4 | 14 | 2.323932 | two component transcriptional regulator | |
| PputGB1_2009 | 3 | 10 | 0.589997 | hypothetical protein | |
| PputGB1_2010 | 0 | 12 | -0.137880 | redoxin domain-containing protein | |
| PputGB1_2011 | -1 | 11 | -0.399593 | hypothetical protein | |
| PputGB1_2012 | -1 | 11 | -1.242161 | O-acetylhomoserine | |
| PputGB1_2013 | -1 | 17 | -2.609205 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_2007 | PF06580 | 33 | 0.002 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_2008 | HTHFIS | 90 | 7e-23 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_2012 | BICOMPNTOXIN | 31 | 0.006 | Staphylococcal bi-component toxin signature. | |
>BICOMPNTOXIN#Staphylococcal bi-component toxin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_2013 | cloacin | 31 | 1e-04 | Cloacin signature. | |
>cloacin#Cloacin signature. | |||||
| 82 | PputGB1_2043 | PputGB1_2047 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PputGB1_2043 | -3 | 10 | 1.876880 | RND family efflux transporter MFP subunit | |
| PputGB1_2044 | -2 | 11 | 1.222370 | CzcA family heavy metal efflux protein | |
| PputGB1_2045 | -1 | 8 | 1.531923 | major facilitator superfamily transporter | |
| PputGB1_2046 | 0 | 9 | 1.240284 | hypothetical protein | |
| PputGB1_2047 | 0 | 8 | 1.363591 | TonB-dependent siderophore receptor |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_2043 | RTXTOXIND | 41 | 5e-06 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_2044 | ACRIFLAVINRP | 779 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_2045 | TCRTETA | 37 | 2e-04 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_2047 | FLGLRINGFLGH | 30 | 0.020 | Flagellar L-ring protein signature. | |
>FLGLRINGFLGH#Flagellar L-ring protein signature. | |||||
| 83 | PputGB1_2141 | PputGB1_2147 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PputGB1_2141 | 0 | 9 | -0.657638 | response regulator receiver protein | |
| PputGB1_2142 | 0 | 11 | -0.406118 | multi-sensor hybrid histidine kinase | |
| PputGB1_2143 | -1 | 12 | -0.470949 | chemotaxis protein CheR | |
| PputGB1_2144 | -2 | 10 | 0.803345 | CheB methylesterase | |
| PputGB1_2145 | -1 | 11 | 1.129023 | response regulator receiver sensor signal | |
| PputGB1_2146 | 0 | 13 | 1.883043 | response regulator receiver protein | |
| PputGB1_2147 | 2 | 14 | 2.928546 | TetR family transcriptional regulator |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_2141 | HTHFIS | 65 | 1e-15 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_2142 | HTHFIS | 81 | 8e-18 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_2145 | HTHFIS | 73 | 3e-16 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_2146 | HTHFIS | 70 | 3e-17 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_2147 | HTHTETR | 58 | 1e-12 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| 84 | PputGB1_2329 | PputGB1_2332 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PputGB1_2329 | 0 | 15 | 1.823726 | RND family efflux transporter MFP subunit | |
| PputGB1_2330 | 0 | 15 | 1.662501 | acriflavin resistance protein | |
| PputGB1_2331 | -2 | 13 | 1.762765 | acriflavin resistance protein | |
| PputGB1_2332 | -2 | 10 | 1.833115 | RND efflux system outer membrane lipoprotein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_2329 | RTXTOXIND | 46 | 2e-07 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_2330 | ACRIFLAVINRP | 833 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_2331 | ACRIFLAVINRP | 811 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_2332 | RTXTOXIND | 34 | 0.001 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| 85 | PputGB1_2370 | PputGB1_2378 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PputGB1_2370 | 0 | 18 | 1.107270 | PAS/PAC sensor signal transduction histidine | |
| PputGB1_2371 | -1 | 20 | 0.288308 | two component LuxR family transcriptional | |
| PputGB1_2372 | -1 | 13 | -0.490073 | MarR family transcriptional regulator | |
| PputGB1_2373 | -2 | 13 | -0.940013 | secretion protein HlyD family protein | |
| PputGB1_2374 | -2 | 13 | -1.068845 | EmrB/QacA family drug resistance transporter | |
| PputGB1_2375 | -1 | 13 | -0.882629 | 30S ribosomal protein S1 | |
| PputGB1_2376 | -3 | 12 | -0.374101 | short-chain dehydrogenase/reductase SDR | |
| PputGB1_2377 | -3 | 12 | -0.637937 | PAS/PAC sensor hybrid histidine kinase | |
| PputGB1_2378 | -2 | 11 | 0.079048 | PAS/PAC sensor hybrid histidine kinase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_2370 | PF06580 | 34 | 7e-04 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_2371 | HTHFIS | 100 | 5e-27 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_2373 | RTXTOXIND | 87 | 1e-20 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_2374 | TCRTETB | 119 | 2e-31 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_2376 | DHBDHDRGNASE | 93 | 7e-25 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_2377 | HTHFIS | 77 | 9e-17 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_2378 | HTHFIS | 65 | 3e-13 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 86 | PputGB1_2423 | PputGB1_2433 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PputGB1_2423 | -1 | 12 | 2.657966 | magnesium chelatase | |
| PputGB1_2424 | -2 | 12 | 2.632535 | hypothetical protein | |
| PputGB1_2425 | -2 | 11 | 2.503282 | hypothetical protein | |
| PputGB1_2426 | -3 | 10 | 2.241888 | sigma-54 dependent trancsriptional regulator | |
| PputGB1_2427 | -2 | 11 | 2.412401 | RND family efflux transporter MFP subunit | |
| PputGB1_2428 | -2 | 12 | 1.571017 | hydrophobe/amphiphile efflux-1 (HAE1) family | |
| PputGB1_2429 | -2 | 11 | 1.703525 | RND efflux system outer membrane lipoprotein | |
| PputGB1_2430 | 0 | 12 | 0.764095 | regulatory protein LacI | |
| PputGB1_2431 | -1 | 13 | 0.856727 | peptidase U32 | |
| PputGB1_2432 | 0 | 14 | 1.556533 | endoribonuclease L-PSP | |
| PputGB1_2433 | -1 | 13 | 1.641229 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_2423 | HTHFIS | 47 | 7e-08 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_2426 | HTHFIS | 399 | e-138 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_2427 | RTXTOXIND | 43 | 2e-06 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_2428 | ACRIFLAVINRP | 1157 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_2430 | HTHTETR | 32 | 7e-04 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_2433 | ARGREPRESSOR | 27 | 0.044 | Bacterial arginine repressor signature. | |
>ARGREPRESSOR#Bacterial arginine repressor signature. | |||||
| 87 | PputGB1_2481 | PputGB1_2484 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PputGB1_2481 | -2 | 14 | 1.750579 | hydrophobe/amphiphile efflux-1 (HAE1) family | |
| PputGB1_2482 | 0 | 14 | 2.628800 | RND family efflux transporter MFP subunit | |
| PputGB1_2483 | -1 | 12 | 1.459374 | two component transcriptional regulator | |
| PputGB1_2484 | -1 | 9 | 1.450508 | integral membrane sensor signal transduction |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_2481 | ACRIFLAVINRP | 1129 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_2482 | RTXTOXIND | 41 | 8e-06 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_2483 | HTHFIS | 86 | 2e-21 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_2484 | PF06580 | 32 | 0.005 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| 88 | PputGB1_2505 | PputGB1_2517 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PputGB1_2505 | -4 | 9 | 0.024491 | PAS/PAC sensor hybrid histidine kinase | |
| PputGB1_2506 | -2 | 10 | 1.004633 | histidine kinase | |
| PputGB1_2507 | -3 | 11 | 1.513066 | hypothetical protein | |
| PputGB1_2508 | -2 | 10 | 1.443576 | TetR family transcriptional regulator | |
| PputGB1_2509 | -3 | 12 | 1.731189 | RND efflux system outer membrane lipoprotein | |
| PputGB1_2510 | -2 | 9 | 1.105822 | hydrophobe/amphiphile efflux-1 (HAE1) family | |
| PputGB1_2511 | -3 | 11 | 2.371526 | RND family efflux transporter MFP subunit | |
| PputGB1_2512 | -1 | 11 | 2.122891 | rhodanese domain-containing protein | |
| PputGB1_2513 | -1 | 10 | 1.775685 | cysteine dioxygenase type I | |
| PputGB1_2514 | -1 | 11 | 1.370691 | aliphatic sulfonates ABC transporter | |
| PputGB1_2515 | -1 | 10 | 0.814097 | putative nitrilotriacetate monooxygenase, | |
| PputGB1_2516 | -1 | 11 | 0.271617 | type II secretion system protein | |
| PputGB1_2517 | -1 | 13 | -0.192515 | general secretion pathway protein G |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_2505 | HTHFIS | 71 | 6e-15 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_2506 | HTHFIS | 93 | 3e-22 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_2507 | adhesinb | 35 | 4e-04 | Adhesin B signature. | |
>adhesinb#Adhesin B signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_2508 | HTHTETR | 81 | 3e-21 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_2510 | ACRIFLAVINRP | 1102 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_2511 | RTXTOXIND | 55 | 2e-10 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_2516 | BCTERIALGSPF | 259 | 3e-85 | Bacterial general secretion pathway protein F signa... | |
>BCTERIALGSPF#Bacterial general secretion pathway protein F | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_2517 | BCTERIALGSPG | 185 | 8e-64 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
| 89 | PputGB1_2643 | PputGB1_2650 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PputGB1_2643 | 0 | 11 | 1.336870 | major facilitator superfamily transporter | |
| PputGB1_2644 | 1 | 14 | 1.034139 | aldo/keto reductase | |
| PputGB1_2645 | 3 | 15 | 0.945734 | Dyp-type peroxidase family protein | |
| PputGB1_2646 | 0 | 15 | 0.421089 | bile acid:sodium symporter | |
| PputGB1_2647 | 0 | 13 | 0.825539 | fatty acid hydroxylase | |
| PputGB1_2648 | -1 | 11 | 0.902291 | MgtC/SapB transporter | |
| PputGB1_2649 | -1 | 11 | 0.882056 | N-acetyltransferase GCN5 | |
| PputGB1_2650 | -2 | 9 | 0.733230 | Tn4652 cointegrate resolution protein T |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_2643 | TCRTETA | 51 | 3e-09 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_2645 | BLACTAMASEA | 31 | 0.005 | Beta-lactamase class A signature. | |
>BLACTAMASEA#Beta-lactamase class A signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_2649 | SACTRNSFRASE | 35 | 4e-05 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_2650 | RTXTOXIND | 32 | 0.004 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| 90 | PputGB1_2986 | PputGB1_2995 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PputGB1_2986 | 4 | 41 | -6.449294 | short chain dehydrogenase | |
| PputGB1_2987 | 5 | 42 | -8.079942 | PfpI family intracellular peptidase | |
| PputGB1_2988 | 7 | 48 | -8.438338 | histidine kinase | |
| PputGB1_2989 | 7 | 46 | -8.535180 | response regulator receiver protein | |
| PputGB1_2990 | 6 | 46 | -8.425867 | hypothetical protein | |
| PputGB1_2991 | 6 | 46 | -8.591904 | response regulator receiver protein | |
| PputGB1_2992 | 6 | 46 | -8.524545 | alpha/beta hydrolase fold family protein | |
| PputGB1_2993 | 6 | 45 | -8.073097 | PAS/PAC sensor signal transduction histidine | |
| PputGB1_2994 | 5 | 39 | -7.071983 | hypothetical protein | |
| PputGB1_2995 | 5 | 37 | -6.593923 | response regulator receiver protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_2986 | DHBDHDRGNASE | 65 | 6e-14 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_2988 | PF06580 | 37 | 7e-05 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_2989 | HTHFIS | 73 | 2e-18 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_2991 | HTHFIS | 67 | 3e-16 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_2995 | HTHFIS | 61 | 6e-14 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 91 | PputGB1_3041 | PputGB1_3044 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PputGB1_3041 | -2 | 17 | -0.111927 | outer membrane efflux protein | |
| PputGB1_3042 | -2 | 15 | -0.381485 | RND family efflux transporter MFP subunit | |
| PputGB1_3043 | -2 | 13 | -0.187572 | CzcA family heavy metal efflux protein | |
| PputGB1_3044 | -1 | 11 | 0.579601 | PAS/PAC sensor-containing methyl-accepting |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_3041 | RTXTOXIND | 29 | 0.039 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_3042 | RTXTOXIND | 44 | 1e-06 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_3043 | ACRIFLAVINRP | 669 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_3044 | RTXTOXIND | 29 | 0.026 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| 92 | PputGB1_3066 | PputGB1_3074 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PputGB1_3066 | -1 | 14 | 1.313632 | hypothetical protein | |
| PputGB1_3067 | -1 | 14 | 0.845671 | hypothetical protein | |
| PputGB1_3068 | -2 | 13 | 1.361663 | DoxX family protein | |
| PputGB1_3069 | -1 | 12 | 1.712349 | AraC family transcriptional regulator | |
| PputGB1_3070 | 2 | 18 | 2.041466 | short-chain dehydrogenase/reductase SDR | |
| PputGB1_3071 | 1 | 17 | 2.039877 | zinc-binding alcohol dehydrogenase family | |
| PputGB1_3072 | 2 | 17 | 2.101705 | hypothetical protein | |
| PputGB1_3073 | 1 | 16 | 1.931772 | hypothetical protein | |
| PputGB1_3074 | 1 | 17 | 1.704586 | peptidase M50 |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_3066 | VACCYTOTOXIN | 29 | 0.028 | Helicobacter pylori vacuolating cytotoxin signature. | |
>VACCYTOTOXIN#Helicobacter pylori vacuolating cytotoxin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_3070 | DHBDHDRGNASE | 85 | 7e-22 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_3072 | RTXTOXIND | 29 | 0.016 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_3073 | RTXTOXIND | 59 | 1e-11 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_3074 | RTXTOXIND | 38 | 2e-04 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| 93 | PputGB1_3853 | PputGB1_3860 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PputGB1_3853 | 0 | 16 | -1.148033 | hypothetical protein | |
| PputGB1_3854 | 0 | 12 | -1.670032 | xanthine permease | |
| PputGB1_3855 | -1 | 11 | -2.443938 | hypothetical protein | |
| PputGB1_3856 | -2 | 10 | -1.556950 | hypothetical protein | |
| PputGB1_3857 | -2 | 9 | -1.058826 | hypothetical protein | |
| PputGB1_3858 | -2 | 13 | -0.555902 | sulfatase | |
| PputGB1_3859 | 0 | 17 | -0.805725 | hypothetical protein | |
| PputGB1_3860 | 0 | 23 | 0.166422 | TetR family transcriptional regulator |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_3853 | GPOSANCHOR | 32 | 0.004 | Gram-positive coccus surface protein anchor signature. | |
>GPOSANCHOR#Gram-positive coccus surface protein anchor signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_3855 | CHANNELTSX | 37 | 4e-05 | Nucleoside-specific channel-forming protein Tsx signa... | |
>CHANNELTSX#Nucleoside-specific channel-forming protein Tsx | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_3856 | CHANNELTSX | 32 | 0.003 | Nucleoside-specific channel-forming protein Tsx signa... | |
>CHANNELTSX#Nucleoside-specific channel-forming protein Tsx | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_3860 | HTHTETR | 74 | 1e-18 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| 94 | PputGB1_3900 | PputGB1_3951 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PputGB1_3900 | -2 | 14 | 0.073075 | hypothetical protein | |
| PputGB1_3901 | -2 | 14 | 0.434159 | CheW protein | |
| PputGB1_3902 | -1 | 12 | 1.141519 | CheW protein | |
| PputGB1_3903 | 0 | 12 | 0.225814 | cobyrinic acid ac-diamide synthase | |
| PputGB1_3904 | 2 | 11 | -0.215040 | flagellar motor protein MotD | |
| PputGB1_3905 | 1 | 11 | 0.035768 | flagellar motor protein | |
| PputGB1_3906 | 0 | 10 | 0.177422 | chemotaxis-specific methylesterase | |
| PputGB1_3907 | 0 | 12 | 0.395454 | CheA signal transduction histidine kinase | |
| PputGB1_3908 | -2 | 10 | -0.051275 | chemotaxis phosphatase, CheZ | |
| PputGB1_3909 | -1 | 11 | 0.258099 | response regulator receiver protein | |
| PputGB1_3910 | -1 | 12 | 0.524711 | flagellar biosynthesis sigma factor | |
| PputGB1_3911 | -1 | 13 | 0.350822 | cobyrinic acid ac-diamide synthase | |
| PputGB1_3912 | 1 | 14 | 0.102944 | flagellar biosynthesis regulator FlhF | |
| PputGB1_3913 | 1 | 16 | -0.183334 | flagellar biosynthesis protein FlhA | |
| PputGB1_3914 | 2 | 19 | -0.396183 | flagellar biosynthesis protein FlhB | |
| PputGB1_3915 | 4 | 19 | 0.159356 | flagellar biosynthesis protein FliR | |
| PputGB1_3916 | 3 | 17 | -0.006788 | flagellar biosynthesis protein FliQ | |
| PputGB1_3917 | 2 | 14 | 1.283452 | flagellar biosynthesis protein FliP | |
| PputGB1_3918 | -1 | 12 | 1.284225 | flagellar biosynthesis protein FliO | |
| PputGB1_3919 | -2 | 11 | 1.070121 | flagellar motor switch protein | |
| PputGB1_3920 | -2 | 12 | 0.920210 | flagellar motor switch protein FliM | |
| PputGB1_3921 | 0 | 15 | 1.101073 | flagellar basal body-associated protein FliL | |
| PputGB1_3922 | -1 | 15 | 1.776825 | flagellar hook-length control protein | |
| PputGB1_3923 | -1 | 13 | 1.035580 | Hpt protein | |
| PputGB1_3924 | 0 | 13 | 1.191243 | response regulator receiver protein | |
| PputGB1_3925 | -1 | 12 | 1.216155 | anti-sigma-factor antagonist | |
| PputGB1_3926 | -1 | 12 | 1.351447 | flagellar biosynthesis chaperone | |
| PputGB1_3927 | -1 | 10 | 1.768883 | flagellum-specific ATP synthase | |
| PputGB1_3928 | -1 | 9 | 1.737441 | flagellar assembly protein H | |
| PputGB1_3929 | -1 | 10 | 1.145481 | flagellar motor switch protein G | |
| PputGB1_3930 | -1 | 9 | 0.937488 | flagellar MS-ring protein | |
| PputGB1_3931 | 1 | 11 | 0.120574 | flagellar hook-basal body protein FliE | |
| PputGB1_3932 | -1 | 15 | -1.016670 | Fis family two component sigma-54 specific | |
| PputGB1_3933 | -2 | 17 | -2.540086 | PAS/PAC sensor signal transduction histidine | |
| PputGB1_3934 | -1 | 23 | -4.680255 | sigma-54 dependent trancsriptional regulator | |
| PputGB1_3935 | 0 | 26 | -4.788033 | hypothetical protein | |
| PputGB1_3936 | -1 | 22 | -3.902024 | flagellar protein FliS | |
| PputGB1_3937 | 0 | 18 | -2.593861 | flagellar hook-associated 2 domain-containing | |
| PputGB1_3938 | 0 | 16 | -1.534675 | flagellar protein FlaG protein | |
| PputGB1_3939 | -1 | 15 | -1.113370 | flagellin domain-containing protein | |
| PputGB1_3940 | -1 | 14 | 0.040231 | beta-ketoacyl-acyl-carrier-protein synthase I | |
| PputGB1_3941 | 0 | 13 | 0.099183 | flagellar hook-associated protein FlgL | |
| PputGB1_3942 | 1 | 15 | 0.530046 | flagellar hook-associated protein FlgK | |
| PputGB1_3943 | 2 | 16 | 0.585068 | flagellar rod assembly protein/muramidase FlgJ | |
| PputGB1_3944 | 4 | 18 | -0.000696 | flagellar basal body P-ring protein | |
| PputGB1_3945 | 4 | 16 | -0.893362 | flagellar basal body L-ring protein | |
| PputGB1_3946 | 3 | 18 | -1.283588 | flagellar basal body rod protein FlgG | |
| PputGB1_3947 | 1 | 14 | -1.434126 | flagellar basal body rod protein FlgF | |
| PputGB1_3948 | 0 | 16 | -1.905812 | hypothetical protein | |
| PputGB1_3949 | 1 | 14 | -2.216020 | flagellar hook protein FlgE | |
| PputGB1_3950 | 0 | 12 | -1.583564 | flagellar basal body rod modification protein | |
| PputGB1_3951 | -1 | 10 | -0.782151 | flagellar basal body rod protein FlgC |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_3900 | PF06580 | 26 | 0.040 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_3904 | OMPADOMAIN | 73 | 9e-17 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_3906 | HTHFIS | 57 | 4e-11 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_3907 | PF06580 | 43 | 2e-06 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_3909 | HTHFIS | 89 | 5e-24 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_3914 | TYPE3IMSPROT | 319 | e-109 | Type III secretion system inner membrane S protein ... | |
>TYPE3IMSPROT#Type III secretion system inner membrane S protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_3915 | TYPE3IMRPROT | 136 | 3e-41 | Type III secretion system inner membrane R protein ... | |
>TYPE3IMRPROT#Type III secretion system inner membrane R protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_3916 | TYPE3IMQPROT | 54 | 3e-13 | Type III secretion system inner membrane Q protein ... | |
>TYPE3IMQPROT#Type III secretion system inner membrane Q protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_3917 | FLGBIOSNFLIP | 266 | 2e-92 | Escherichia coli: Flagellar biosynthetic protein Fl... | |
>FLGBIOSNFLIP#Escherichia coli: Flagellar biosynthetic protein FliP | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_3919 | FLGMOTORFLIN | 120 | 4e-38 | Flagellar motor switch protein FliN signature. | |
>FLGMOTORFLIN#Flagellar motor switch protein FliN signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_3920 | FLGMOTORFLIM | 256 | 6e-86 | Flagellar motor switch protein FliM signature. | |
>FLGMOTORFLIM#Flagellar motor switch protein FliM signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_3922 | FLGHOOKFLIK | 49 | 1e-08 | Flagellar hook-length control protein signature. | |
>FLGHOOKFLIK#Flagellar hook-length control protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_3924 | HTHFIS | 77 | 6e-17 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_3926 | FLGFLIJ | 51 | 7e-11 | Flagellar FliJ protein signature. | |
>FLGFLIJ#Flagellar FliJ protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_3928 | FLGFLIH | 57 | 7e-12 | Flagellar assembly protein FliH signature. | |
>FLGFLIH#Flagellar assembly protein FliH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_3929 | FLGMOTORFLIG | 303 | e-104 | Flagellar motor switch protein FliG signature. | |
>FLGMOTORFLIG#Flagellar motor switch protein FliG signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_3930 | FLGMRINGFLIF | 533 | 0.0 | Flagellar M-ring protein signature. | |
>FLGMRINGFLIF#Flagellar M-ring protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_3931 | FLGHOOKFLIE | 79 | 1e-22 | Flagellar hook-basal body complex protein FliE signa... | |
>FLGHOOKFLIE#Flagellar hook-basal body complex protein FliE | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_3932 | HTHFIS | 479 | e-169 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_3934 | HTHFIS | 506 | e-179 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_3937 | FLAGELLIN | 30 | 0.015 | Flagellin signature. | |
>FLAGELLIN#Flagellin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_3939 | FLAGELLIN | 179 | 1e-52 | Flagellin signature. | |
>FLAGELLIN#Flagellin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_3941 | FLAGELLIN | 62 | 2e-12 | Flagellin signature. | |
>FLAGELLIN#Flagellin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_3942 | FLGHOOKAP1 | 217 | 9e-65 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_3943 | FLGFLGJ | 146 | 3e-43 | Flagellar protein FlgJ signature. | |
>FLGFLGJ#Flagellar protein FlgJ signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_3944 | FLGPRINGFLGI | 447 | e-160 | Flagellar P-ring protein signature. | |
>FLGPRINGFLGI#Flagellar P-ring protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_3945 | FLGLRINGFLGH | 194 | 1e-64 | Flagellar L-ring protein signature. | |
>FLGLRINGFLGH#Flagellar L-ring protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_3946 | FLGHOOKAP1 | 45 | 2e-07 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_3949 | FLGHOOKAP1 | 42 | 3e-06 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_3951 | FLGHOOKAP1 | 35 | 5e-05 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
| 95 | PputGB1_3994 | PputGB1_4000 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PputGB1_3994 | -2 | 10 | 0.177954 | transcriptional regulator TyrR | |
| PputGB1_3995 | -3 | 10 | 0.918557 | phenylalanine 4-monooxygenase | |
| PputGB1_3996 | -3 | 10 | 0.564526 | pterin-4-alpha-carbinolamine dehydratase | |
| PputGB1_3997 | -3 | 10 | 1.019611 | protein tyrosine/serine phosphatase | |
| PputGB1_3998 | -3 | 13 | 1.441105 | major facilitator superfamily transporter | |
| PputGB1_3999 | -3 | 15 | 1.157733 | FAD linked oxidase domain-containing protein | |
| PputGB1_4000 | -1 | 13 | 0.071282 | LysR family transcriptional regulator |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_3994 | HTHFIS | 307 | e-101 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_3998 | TCRTETA | 37 | 1e-04 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_3999 | cloacin | 31 | 0.028 | Cloacin signature. | |
>cloacin#Cloacin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_4000 | INTIMIN | 29 | 0.024 | Intimin signature. | |
>INTIMIN#Intimin signature. | |||||
| 96 | PputGB1_4008 | PputGB1_4011 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PputGB1_4008 | 0 | 11 | 1.613600 | YciI-like protein | |
| PputGB1_4009 | 0 | 9 | 1.721946 | two component transcriptional regulator | |
| PputGB1_4010 | -2 | 10 | 1.250903 | hypothetical protein | |
| PputGB1_4011 | -1 | 12 | 1.084426 | integral membrane sensor signal transduction |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_4008 | adhesinmafb | 27 | 0.013 | Neisseria meningitidis: adhesin MafB signature. | |
>adhesinmafb#Neisseria meningitidis: adhesin MafB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_4009 | HTHFIS | 101 | 4e-27 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_4010 | NEISSPPORIN | 28 | 0.011 | Neisseria sp. porin signature. | |
>NEISSPPORIN#Neisseria sp. porin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_4011 | PF06580 | 35 | 5e-04 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| 97 | PputGB1_4190 | PputGB1_4197 | N ![]() | Y ![]() | Y | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PputGB1_4190 | -2 | 13 | 0.144831 | methyl-accepting chemotaxis sensory transducer | |
| PputGB1_4191 | 0 | 16 | -1.874162 | cation efflux protein | |
| PputGB1_4192 | 3 | 17 | -2.106673 | *exsB protein | |
| PputGB1_4193 | 3 | 18 | -2.403008 | radical SAM domain-containing protein | |
| PputGB1_4194 | 2 | 17 | -1.886094 | tol-pal system protein YbgF | |
| PputGB1_4195 | 3 | 14 | -1.947011 | peptidoglycan-associated lipoprotein | |
| PputGB1_4196 | 1 | 11 | -1.067691 | translocation protein TolB | |
| PputGB1_4197 | 3 | 10 | -0.656371 | protein TolA |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_4190 | CHANLCOLICIN | 30 | 0.037 | Channel forming colicin signature. | |
>CHANLCOLICIN#Channel forming colicin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_4194 | INTIMIN | 28 | 0.033 | Intimin signature. | |
>INTIMIN#Intimin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_4195 | OMPADOMAIN | 114 | 3e-33 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_4197 | IGASERPTASE | 65 | 2e-13 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| 98 | PputGB1_4217 | PputGB1_4240 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PputGB1_4217 | -1 | 10 | -0.411291 | virulence factor family protein | |
| PputGB1_4218 | -1 | 12 | -0.553210 | K potassium transporter | |
| PputGB1_4219 | -1 | 16 | -0.934591 | 30S ribosomal protein S12 methylthiotransferase | |
| PputGB1_4220 | -1 | 21 | -0.591267 | hypothetical protein | |
| PputGB1_4221 | -1 | 20 | -0.531952 | hypothetical protein | |
| PputGB1_4222 | -2 | 15 | 0.599133 | hypothetical protein | |
| PputGB1_4223 | -1 | 14 | 0.811879 | hypothetical protein | |
| PputGB1_4224 | -1 | 11 | 1.027280 | N-acetyltransferase GCN5 | |
| PputGB1_4225 | 0 | 12 | 1.026344 | RNA-binding S4 domain-containing protein | |
| PputGB1_4226 | 0 | 13 | 0.539764 | hypothetical protein | |
| PputGB1_4227 | 0 | 12 | 0.636836 | hypothetical protein | |
| PputGB1_4228 | 0 | 11 | 0.806053 | C4-dicarboxylate transporter DctA | |
| PputGB1_4229 | 1 | 10 | 1.567563 | integral membrane sensor signal transduction | |
| PputGB1_4230 | 0 | 13 | 1.595214 | two component transcriptional regulator | |
| PputGB1_4231 | 1 | 17 | 1.007809 | outer membrane protein H1 | |
| PputGB1_4232 | 0 | 16 | 1.074074 | dienelactone hydrolase | |
| PputGB1_4233 | 2 | 19 | 0.586788 | 4'-phosphopantetheinyl transferase | |
| PputGB1_4234 | 1 | 15 | -0.263033 | integral membrane sensor signal transduction | |
| PputGB1_4235 | 3 | 18 | -0.644264 | two component transcriptional regulator | |
| PputGB1_4236 | 2 | 18 | -0.431045 | ribonucleotide-diphosphate reductase subunit | |
| PputGB1_4237 | 0 | 15 | -0.768499 | hypothetical protein | |
| PputGB1_4238 | -1 | 14 | -0.817584 | ribonucleotide-diphosphate reductase subunit | |
| PputGB1_4239 | 0 | 12 | -0.582221 | outer membrane porin | |
| PputGB1_4240 | 0 | 14 | 0.431020 | NAD-dependent epimerase/dehydratase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_4217 | PF06057 | 287 | 3e-98 | Type IV secretory pathway VirJ component | |
>PF06057#Type IV secretory pathway VirJ component | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_4221 | PRTACTNFAMLY | 38 | 1e-04 | Pertactin virulence factor family signature. | |
>PRTACTNFAMLY#Pertactin virulence factor family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_4223 | cloacin | 48 | 8e-09 | Cloacin signature. | |
>cloacin#Cloacin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_4224 | SACTRNSFRASE | 36 | 2e-05 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_4229 | PF06580 | 29 | 0.032 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_4230 | HTHFIS | 86 | 2e-21 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_4231 | SECA | 28 | 0.036 | SecA protein signature. | |
>SECA#SecA protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_4233 | ENTSNTHTASED | 96 | 3e-26 | Enterobactin synthetase component D signature. | |
>ENTSNTHTASED#Enterobactin synthetase component D signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_4234 | PF06580 | 34 | 0.001 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_4235 | HTHFIS | 78 | 1e-18 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_4240 | NUCEPIMERASE | 71 | 3e-16 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| 99 | PputGB1_4293 | PputGB1_4301 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PputGB1_4293 | 0 | 12 | 1.741271 | hypothetical protein | |
| PputGB1_4294 | 1 | 12 | 2.239966 | OmpA/MotB domain-containing protein | |
| PputGB1_4295 | 1 | 13 | 0.826756 | OmpA/MotB domain-containing protein | |
| PputGB1_4296 | 1 | 13 | 0.144240 | hypothetical protein | |
| PputGB1_4297 | 1 | 13 | -1.254833 | hypothetical protein | |
| PputGB1_4298 | 1 | 16 | -2.704012 | water stress/hypersensitive response | |
| PputGB1_4299 | 1 | 17 | -2.807340 | SecC motif-containing protein | |
| PputGB1_4300 | 0 | 12 | -0.600519 | pyridoxal-5'-phosphate-dependent protein subunit | |
| PputGB1_4301 | 0 | 12 | 0.001834 | major facilitator superfamily transporter |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_4293 | ENTSNTHTASED | 26 | 0.018 | Enterobactin synthetase component D signature. | |
>ENTSNTHTASED#Enterobactin synthetase component D signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_4294 | OMPADOMAIN | 124 | 3e-36 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_4295 | OMPADOMAIN | 117 | 1e-33 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_4297 | SECA | 49 | 2e-09 | SecA protein signature. | |
>SECA#SecA protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_4298 | PERTACTIN | 29 | 0.014 | Pertactin signature. | |
>PERTACTIN#Pertactin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_4299 | SECA | 57 | 1e-13 | SecA protein signature. | |
>SECA#SecA protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_4301 | TCRTETB | 33 | 0.002 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| 100 | PputGB1_4420 | PputGB1_4428 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PputGB1_4420 | 0 | 12 | 1.607196 | NAD-dependent epimerase/dehydratase | |
| PputGB1_4421 | 0 | 10 | 1.267628 | beta-lactamase domain-containing protein | |
| PputGB1_4422 | -1 | 11 | 1.394472 | LysR family transcriptional regulator | |
| PputGB1_4423 | -2 | 14 | 0.244277 | hypothetical protein | |
| PputGB1_4424 | -2 | 14 | 0.416130 | carboxyphosphonoenolpyruvate phosphonomutase | |
| PputGB1_4425 | -2 | 15 | 0.380558 | EmrB/QacA family drug resistance transporter | |
| PputGB1_4426 | -1 | 16 | 0.112833 | TetR family transcriptional regulator | |
| PputGB1_4427 | -1 | 17 | 0.140846 | RND family efflux transporter MFP subunit | |
| PputGB1_4428 | -2 | 16 | -0.004617 | hydrophobe/amphiphile efflux-1 (HAE1) family |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_4420 | NUCEPIMERASE | 37 | 2e-05 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_4425 | TCRTETB | 143 | 8e-40 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_4426 | HTHTETR | 140 | 4e-44 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_4427 | RTXTOXIND | 43 | 2e-06 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_4428 | ACRIFLAVINRP | 1318 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| 101 | PputGB1_4543 | PputGB1_4550 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PputGB1_4543 | 1 | 15 | -0.502534 | S-type pyocin | |
| PputGB1_4544 | 1 | 16 | -0.522195 | colicin immunity protein/pyocin immunity | |
| PputGB1_4545 | 0 | 18 | 0.094966 | bifunctional sulfate adenylyltransferase subunit | |
| PputGB1_4546 | 1 | 15 | -0.772906 | sulfate adenylyltransferase subunit 2 | |
| PputGB1_4547 | 0 | 15 | -0.317776 | hypothetical protein | |
| PputGB1_4548 | 1 | 16 | -0.493962 | 2-alkenal reductase | |
| PputGB1_4549 | 0 | 16 | -0.222910 | ABC transporter-like protein | |
| PputGB1_4550 | 0 | 16 | 0.162468 | polar amino acid ABC transporter inner membrane |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_4543 | PYOCINKILLER | 75 | 2e-19 | Pyocin S killer protein signature. | |
>PYOCINKILLER#Pyocin S killer protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_4545 | TCRTETOQM | 72 | 4e-15 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_4548 | V8PROTEASE | 65 | 5e-14 | V8 serine protease family signature. | |
>V8PROTEASE#V8 serine protease family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_4550 | 2FE2SRDCTASE | 29 | 0.031 | Ferric iron reductase signature. | |
>2FE2SRDCTASE#Ferric iron reductase signature. | |||||
| 102 | PputGB1_4574 | PputGB1_4580 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PputGB1_4574 | 0 | 11 | 3.216972 | short chain dehydrogenase | |
| PputGB1_4575 | -1 | 11 | 2.473506 | RND efflux system outer membrane lipoprotein | |
| PputGB1_4576 | 1 | 13 | 2.080315 | secretion protein HlyD family protein | |
| PputGB1_4577 | 1 | 16 | 2.114709 | major facilitator superfamily transporter | |
| PputGB1_4578 | -1 | 14 | 2.209014 | LysR family transcriptional regulator | |
| PputGB1_4579 | -2 | 14 | 2.091317 | UspA domain-containing protein | |
| PputGB1_4580 | -2 | 14 | 1.925077 | secretion protein HlyD family protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_4574 | DHBDHDRGNASE | 90 | 1e-23 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_4576 | RTXTOXIND | 138 | 6e-39 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_4577 | TCRTETB | 62 | 2e-12 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_4580 | RTXTOXIND | 51 | 1e-09 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| 103 | PputGB1_4911 | PputGB1_4918 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PputGB1_4911 | -1 | 12 | 0.890421 | alpha/beta hydrolase fold family protein | |
| PputGB1_4912 | -1 | 10 | 0.705901 | DNA-binding transcriptional activator OsmE | |
| PputGB1_4913 | -2 | 10 | 0.970749 | ferritin Dps family protein | |
| PputGB1_4914 | -2 | 11 | 1.032332 | AsmA family protein | |
| PputGB1_4915 | -1 | 14 | 0.534897 | hypothetical protein | |
| PputGB1_4916 | -2 | 14 | 0.601826 | TetR family transcriptional regulator | |
| PputGB1_4917 | 0 | 13 | -0.231897 | N-acylglucosamine 2-epimerase | |
| PputGB1_4918 | 1 | 15 | -0.804911 | short-chain dehydrogenase/reductase SDR |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_4911 | PF06057 | 31 | 0.003 | Type IV secretory pathway VirJ component | |
>PF06057#Type IV secretory pathway VirJ component | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_4913 | HELNAPAPROT | 48 | 1e-09 | Helicobacter neutrophil-activating protein A family ... | |
>HELNAPAPROT#Helicobacter neutrophil-activating protein A family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_4916 | HTHTETR | 58 | 8e-13 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_4918 | DHBDHDRGNASE | 91 | 5e-24 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| 104 | PputGB1_5036 | PputGB1_5044 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PputGB1_5036 | -1 | 11 | 2.164496 | hemolysin III family channel protein | |
| PputGB1_5037 | -1 | 11 | 2.301917 | CheW domain-containing protein | |
| PputGB1_5038 | 0 | 11 | 2.183584 | CheA signal transduction histidine kinase | |
| PputGB1_5039 | 0 | 15 | 1.168788 | methyl-accepting chemotaxis sensory transducer | |
| PputGB1_5040 | 0 | 14 | 1.467329 | CheW protein | |
| PputGB1_5041 | 0 | 16 | 1.102234 | response regulator receiver protein | |
| PputGB1_5042 | 0 | 15 | 1.536196 | response regulator receiver protein | |
| PputGB1_5043 | 0 | 16 | 1.780211 | glutathione synthetase | |
| PputGB1_5044 | -2 | 17 | 3.205708 | TonB family protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_5036 | PF06580 | 28 | 0.026 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_5038 | HTHFIS | 73 | 4e-15 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_5041 | HTHFIS | 80 | 5e-21 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_5042 | HTHFIS | 71 | 2e-17 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_5044 | PF03544 | 64 | 5e-14 | Gram-negative bacterial tonB protein | |
>PF03544#Gram-negative bacterial tonB protein | |||||
| 105 | PputGB1_5166 | PputGB1_5173 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PputGB1_5166 | -1 | 11 | 0.612819 | peptidase M16 domain-containing protein | |
| PputGB1_5167 | 0 | 11 | 2.081444 | alpha/beta hydrolase fold family protein | |
| PputGB1_5168 | 0 | 10 | 1.905651 | rhodanese domain-containing protein | |
| PputGB1_5169 | -2 | 12 | 1.611389 | TetR family transcriptional regulator | |
| PputGB1_5170 | -2 | 10 | 2.134410 | aldehyde dehydrogenase | |
| PputGB1_5171 | -3 | 11 | 1.307102 | hypothetical protein | |
| PputGB1_5172 | -3 | 13 | 1.248555 | glucose-methanol-choline oxidoreductase | |
| PputGB1_5173 | 1 | 20 | 0.343624 | phosphopantetheine adenylyltransferase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_5166 | ACRIFLAVINRP | 32 | 0.006 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_5167 | PF06057 | 32 | 0.002 | Type IV secretory pathway VirJ component | |
>PF06057#Type IV secretory pathway VirJ component | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_5169 | HTHTETR | 57 | 4e-12 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_5173 | LPSBIOSNTHSS | 220 | 7e-77 | Lipopolysaccharide core biosynthesis protein signat... | |
>LPSBIOSNTHSS#Lipopolysaccharide core biosynthesis protein | |||||
| 106 | PputGB1_5300 | PputGB1_5307 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PputGB1_5300 | -1 | 11 | 1.731924 | Mg chelatase subunit ChlI | |
| PputGB1_5301 | -1 | 12 | 0.811072 | potassium efflux system protein | |
| PputGB1_5302 | 0 | 14 | 0.062786 | hypothetical protein | |
| PputGB1_5303 | -1 | 14 | 0.800568 | isochorismatase hydrolase | |
| PputGB1_5304 | -1 | 13 | 1.399790 | LysR family transcriptional regulator | |
| PputGB1_5305 | -1 | 16 | 1.841094 | amidohydrolase 3 | |
| PputGB1_5306 | -2 | 14 | 2.048601 | hypothetical protein | |
| PputGB1_5307 | -2 | 13 | 2.185535 | isochorismatase hydrolase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_5300 | HTHFIS | 36 | 5e-04 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_5303 | ISCHRISMTASE | 37 | 2e-05 | Isochorismatase signature. | |
>ISCHRISMTASE#Isochorismatase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_5305 | UREASE | 32 | 0.009 | Urea amidohydrolase (urease) protein signature. | |
>UREASE#Urea amidohydrolase (urease) protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_5307 | ISCHRISMTASE | 37 | 2e-05 | Isochorismatase signature. | |
>ISCHRISMTASE#Isochorismatase signature. | |||||
| 107 | PputGB1_5367 | PputGB1_5371 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PputGB1_5367 | -1 | 13 | 0.089320 | two component transcriptional regulator | |
| PputGB1_5368 | -2 | 13 | -0.281567 | PAS/PAC sensor signal transduction histidine | |
| PputGB1_5369 | -2 | 15 | 0.349821 | hypothetical protein | |
| PputGB1_5370 | -2 | 16 | 0.408820 | peptidase M23B | |
| PputGB1_5371 | -2 | 20 | 0.014916 | response regulator receiver protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_5367 | HTHFIS | 98 | 1e-25 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_5368 | PF06580 | 30 | 0.014 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_5370 | RTXTOXIND | 29 | 0.021 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PputGB1_5371 | HTHFIS | 85 | 1e-20 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||