| S.No | Start | End | Bias | Virulence | Insertion elements | Prediction |
| 1 | PA14_00650 | PA14_00925 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_00650 | -2 | 13 | 3.348274 | hypothetical protein | |
| PA14_00660 | -1 | 13 | 2.951547 | RNA 2'-phosphotransferase-like protein | |
| PA14_00670 | -1 | 13 | 2.226490 | hypothetical protein | |
| PA14_00680 | -1 | 14 | 2.850064 | LysR family transcriptional regulator | |
| PA14_00690 | 0 | 14 | 1.659420 | hypothetical protein | |
| PA14_00700 | 2 | 11 | 2.174846 | hypothetical protein | |
| PA14_00710 | 1 | 11 | 1.770890 | osmotically inducible protein OsmC | |
| PA14_00720 | 2 | 12 | 1.867881 | hypothetical protein | |
| PA14_00730 | 2 | 11 | 2.046224 | hypothetical protein | |
| PA14_00740 | 1 | 11 | 1.545437 | lipoprotein | |
| PA14_00750 | 0 | 11 | 1.466317 | hypothetical protein | |
| PA14_00760 | 0 | 13 | 1.290251 | hypothetical protein | |
| PA14_00770 | -1 | 14 | 1.018945 | hypothetical protein | |
| PA14_00780 | -1 | 10 | 0.769962 | hypothetical protein | |
| PA14_00790 | 0 | 10 | 1.800363 | oligopeptidase A | |
| PA14_00800 | 1 | 9 | 2.807037 | hypothetical protein | |
| PA14_00810 | 0 | 11 | 3.239218 | DNA repair photolyase | |
| PA14_00820 | 0 | 13 | 3.352913 | hypothetical protein | |
| PA14_00830 | -1 | 12 | 3.714458 | hypothetical protein | |
| PA14_00850 | 0 | 16 | 4.142527 | hypothetical protein | |
| PA14_00860 | 0 | 17 | 4.005060 | ABC transporter ATP-binding protein | |
| PA14_00875 | 0 | 16 | 3.679584 | serine/threonine protein kinase PpkA | |
| PA14_00890 | 0 | 16 | 3.725007 | phosphoprotein phosphatase | |
| PA14_00900 | -1 | 17 | 3.560988 | hypothetical protein | |
| PA14_00910 | 0 | 17 | 3.628308 | hypothetical protein | |
| PA14_00925 | -1 | 13 | 4.037106 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_00875 | PF03544 | 38 | 8e-05 | Gram-negative bacterial tonB protein | |
>PF03544#Gram-negative bacterial tonB protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_00925 | OMPADOMAIN | 74 | 1e-16 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
| 2 | PA14_01220 | PA14_01360 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_01220 | 2 | 11 | 0.815854 | hypothetical protein | |
| PA14_01230 | 3 | 11 | 0.506609 | hypothetical protein | |
| PA14_01240 | 4 | 12 | -0.706362 | carbonic anhydrase | |
| PA14_01250 | 3 | 12 | -1.074111 | sulfate transporter | |
| PA14_01270 | 4 | 15 | -2.547312 | hypothetical protein | |
| PA14_01290 | 3 | 15 | -1.394709 | cytochrome c oxidase subunit II | |
| PA14_01300 | 2 | 16 | -0.577302 | cytochrome c oxidase subunit I | |
| PA14_01310 | 2 | 13 | 1.746886 | cytochrome C oxidase assembly protein | |
| PA14_01320 | 4 | 13 | 1.764859 | cytochrome c oxidase subunit III | |
| PA14_01330 | 5 | 12 | 2.313304 | hypothetical protein | |
| PA14_01340 | 5 | 12 | 2.263097 | hypothetical protein | |
| PA14_01350 | 4 | 13 | 1.417671 | hypothetical protein | |
| PA14_01360 | 2 | 12 | 1.335788 | hypothetical protein |
| 3 | PA14_01750 | PA14_01930 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_01750 | 2 | 16 | 1.790444 | hydroxydechloroatrazine ethylaminohydrolase | |
| PA14_01760 | 3 | 14 | 1.273335 | nonspecific ribonucleoside hydrolase | |
| PA14_01770 | 3 | 14 | 0.726004 | nucleoside-binding outer membrane protein | |
| PA14_01780 | 0 | 14 | 1.809448 | nucleoside 2-deoxyribosyltransferase | |
| PA14_01790 | 0 | 12 | 2.467658 | nucleoside 2-deoxyribosyltransferase | |
| PA14_01800 | 0 | 10 | 2.253856 | hypothetical protein | |
| PA14_01810 | 0 | 11 | 2.939820 | oxidoreductase | |
| PA14_01830 | -1 | 11 | 2.873832 | adenosine deaminase | |
| PA14_01840 | -1 | 12 | 3.314106 | RNA polymerase ECF-subfamily sigma-70 factor | |
| PA14_01860 | 0 | 12 | 2.836116 | transmembrane sensor | |
| PA14_01870 | 1 | 12 | 2.287931 | TonB-dependent receptor | |
| PA14_01890 | 2 | 12 | 2.603421 | transcriptional regulator PcaQ | |
| PA14_01900 | 1 | 12 | 0.836523 | protocatechuate 3,4-dioxygenase subunit beta | |
| PA14_01910 | 2 | 11 | 0.922922 | protocatechuate 3,4-dioxygenase subunit alpha | |
| PA14_01930 | 2 | 10 | 0.797678 | transcriptional regulator PcaR |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_01770 | CHANNELTSX | 147 | 1e-44 | Nucleoside-specific channel-forming protein Tsx signa... | |
>CHANNELTSX#Nucleoside-specific channel-forming protein Tsx | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_01860 | TYPE3OMGPROT | 30 | 0.017 | Type III secretion system outer membrane G protein ... | |
>TYPE3OMGPROT#Type III secretion system outer membrane G protein | |||||
| 4 | PA14_02230 | PA14_02590 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_02230 | 2 | 12 | 1.486813 | purine-binding chemotaxis protein | |
| PA14_02250 | 0 | 10 | 1.700325 | two-component sensor | |
| PA14_02260 | -1 | 11 | 1.719552 | two-component response regulator | |
| PA14_02270 | -1 | 10 | 2.748817 | chemotaxis transducer | |
| PA14_02290 | -1 | 10 | 2.914994 | LysR family transcriptional regulator | |
| PA14_02300 | -2 | 9 | 3.130417 | 3-ketoacyl-ACP reductase | |
| PA14_02310 | 0 | 8 | 3.115357 | arylsulfatase | |
| PA14_02330 | 1 | 9 | 3.059241 | ABC transporter ATP-binding protein | |
| PA14_02340 | 1 | 9 | 2.565499 | ABC transporter permease | |
| PA14_02360 | 2 | 12 | 2.008646 | ABC transporter substrate-binding protein | |
| PA14_02370 | 2 | 13 | 2.310405 | porin | |
| PA14_02380 | 0 | 14 | 2.168472 | acid phosphatase | |
| PA14_02390 | -1 | 14 | 1.755960 | transcriptional regulator | |
| PA14_02410 | 0 | 14 | 1.437475 | TonB-dependent receptor | |
| PA14_02420 | 1 | 13 | 2.155693 | hypothetical protein | |
| PA14_02435 | 1 | 14 | 2.163380 | hypothetical protein | |
| PA14_02450 | 2 | 14 | 1.539040 | NAD(P) transhydrogenase subunit alpha part 1 | |
| PA14_02460 | 3 | 13 | 0.902998 | NAD(P) transhydrogenase subunit alpha part 2 | |
| PA14_02470 | 1 | 14 | 1.787210 | pyridine nucleotide transhydrogenase subunit | |
| PA14_02490 | 0 | 13 | 2.750787 | hypothetical protein | |
| PA14_02500 | 2 | 13 | 3.040384 | transport protein ExbB | |
| PA14_02510 | 3 | 12 | 3.258749 | transport protein ExbD | |
| PA14_02520 | 2 | 9 | 3.897396 | hypothetical protein | |
| PA14_02530 | 3 | 10 | 4.610119 | hypothetical protein | |
| PA14_02550 | 3 | 9 | 4.928721 | malonate decarboxylase subunit alpha | |
| PA14_02560 | 2 | 12 | 6.445297 | triphosphoribosyl-dephospho-CoA synthase | |
| PA14_02570 | 0 | 13 | 5.769363 | malonate decarboxylase subunit delta | |
| PA14_02580 | 0 | 13 | 4.941016 | malonate decarboxylase subunit beta | |
| PA14_02590 | 0 | 12 | 3.806496 | malonate decarboxylase subunit gamma |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_02250 | PF06580 | 39 | 5e-05 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_02260 | HTHFIS | 90 | 3e-24 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_02300 | DHBDHDRGNASE | 121 | 1e-35 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_02410 | PF03544 | 31 | 0.019 | Gram-negative bacterial tonB protein | |
>PF03544#Gram-negative bacterial tonB protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_02450 | CARBMTKINASE | 29 | 0.033 | Bacterial carbamate kinase signature. | |
>CARBMTKINASE#Bacterial carbamate kinase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_02490 | PF03544 | 89 | 2e-23 | Gram-negative bacterial tonB protein | |
>PF03544#Gram-negative bacterial tonB protein | |||||
| 5 | PA14_03150 | PA14_03560 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_03150 | -1 | 33 | -5.696982 | hypothetical protein | |
| PA14_03160 | 1 | 34 | -6.381874 | hypothetical protein | |
| PA14_03163 | 2 | 32 | -5.496465 | hypothetical protein | |
| PA14_03166 | 3 | 29 | -4.577917 | hypothetical protein | |
| PA14_03170 | 1 | 20 | -2.820456 | hypothetical protein | |
| PA14_03180 | 1 | 17 | -2.470648 | hypothetical protein | |
| PA14_03190 | -1 | 20 | -3.127303 | hypothetical protein | |
| PA14_03200 | -2 | 21 | -3.452161 | hypothetical protein | |
| PA14_03210 | -1 | 27 | -4.708899 | hypothetical protein | |
| PA14_03220 | -1 | 30 | -5.325940 | hypothetical protein | |
| PA14_03240 | 0 | 41 | -7.138574 | secreted protein Hcp | |
| PA14_03250 | 0 | 43 | -7.221625 | hypothetical protein | |
| PA14_03265 | -1 | 43 | -7.314773 | hypothetical protein | |
| PA14_03270 | -1 | 43 | -7.495273 | hypothetical protein | |
| PA14_03285 | 1 | 45 | -7.758145 | hypothetical protein | |
| PA14_03290 | 1 | 40 | -7.536577 | hypothetical protein | |
| PA14_03300 | 1 | 42 | -7.837741 | hypothetical protein | |
| PA14_03310 | 0 | 43 | -8.025062 | hypothetical protein | |
| PA14_03320 | -1 | 41 | -7.415747 | hypothetical protein | |
| PA14_03330 | 0 | 42 | -7.316338 | hypothetical protein | |
| PA14_03340 | 1 | 42 | -7.596707 | hypothetical protein | |
| PA14_03350 | 2 | 44 | -8.112731 | hypothetical protein | |
| PA14_03360 | 0 | 46 | -7.378375 | hypothetical protein | |
| PA14_03370 | 0 | 32 | -5.787682 | hypothetical protein | |
| PA14_03380 | 0 | 22 | -4.689258 | hypothetical protein | |
| PA14_03390 | 1 | 14 | -1.485055 | hypothetical protein | |
| PA14_03400 | 0 | 10 | 0.631895 | hypothetical protein | |
| PA14_03420 | 0 | 12 | 1.567019 | *hypothetical protein | |
| PA14_03430 | -1 | 14 | 1.682545 | succinate-semialdehyde dehydrogenase I | |
| PA14_03450 | -1 | 9 | 2.190759 | 4-aminobutyrate aminotransferase | |
| PA14_03470 | 1 | 9 | 2.436234 | hypothetical protein | |
| PA14_03480 | 1 | 13 | 3.002000 | GntR family transcriptional regulator | |
| PA14_03490 | 3 | 13 | 2.735028 | hypothetical protein | |
| PA14_03510 | 4 | 12 | 2.841116 | hypothetical protein | |
| PA14_03520 | 4 | 12 | 2.946829 | hypothetical protein | |
| PA14_03530 | 2 | 11 | 2.922952 | transcriptional regulator | |
| PA14_03550 | 3 | 11 | 3.703979 | MFS transporter | |
| PA14_03560 | 2 | 10 | 3.666131 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_03270 | GPOSANCHOR | 33 | 0.005 | Gram-positive coccus surface protein anchor signature. | |
>GPOSANCHOR#Gram-positive coccus surface protein anchor signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_03470 | HTHFIS | 54 | 5e-10 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_03530 | PF05043 | 29 | 0.023 | Transcriptional activator | |
>PF05043#Transcriptional activator | |||||
| 6 | PA14_06310 | PA14_06500 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_06310 | 2 | 11 | 2.250950 | ACT domain-containing protein | |
| PA14_06320 | 3 | 11 | 2.214645 | hypothetical protein | |
| PA14_06330 | 0 | 12 | 2.670912 | serine/threonine protein kinase | |
| PA14_06340 | 1 | 13 | 2.784880 | molybdenum transport regulator | |
| PA14_06350 | 1 | 12 | 2.677777 | hypothetical protein | |
| PA14_06360 | 2 | 8 | 2.725213 | phosphoribosyl transferase | |
| PA14_06390 | 3 | 9 | 1.174352 | hypothetical protein | |
| PA14_06400 | 2 | 10 | 1.662638 | LysR family transcriptional regulator | |
| PA14_06420 | 1 | 12 | 0.992422 | hypothetical protein | |
| PA14_06430 | 0 | 11 | 1.434917 | hypothetical protein | |
| PA14_06450 | -1 | 10 | 1.692086 | acetyl-CoA carboxylase biotin carboxylase | |
| PA14_06460 | -2 | 8 | 1.987233 | hypothetical protein | |
| PA14_06480 | -2 | 9 | 3.088009 | hydrolase | |
| PA14_06500 | -1 | 11 | 3.150460 | biotin synthase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_06310 | PYOCINKILLER | 28 | 0.026 | Pyocin S killer protein signature. | |
>PYOCINKILLER#Pyocin S killer protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_06360 | ACRIFLAVINRP | 30 | 0.012 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_06430 | RTXTOXIND | 31 | 3e-04 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| 7 | PA14_07310 | PA14_07650 | Y ![]() | N | Y | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_07310 | 3 | 16 | 1.371739 | hydrolase | |
| PA14_07330 | 1 | 15 | 0.295019 | hypothetical protein | |
| PA14_07340 | 0 | 13 | 1.287990 | transcriptional regulator | |
| PA14_07355 | 0 | 14 | 0.532714 | hypothetical protein | |
| PA14_07360 | 0 | 13 | 1.382888 | hypothetical protein | |
| PA14_07370 | 0 | 10 | 0.431453 | hypothetical protein | |
| PA14_07380 | 0 | 10 | 0.127298 | hypothetical protein | |
| PA14_07400 | 2 | 13 | -1.064773 | hypothetical protein | |
| PA14_07410 | 2 | 13 | -1.354400 | hypothetical protein | |
| PA14_07420 | 2 | 20 | -3.539643 | hypothetical protein | |
| PA14_07430 | 0 | 14 | -2.605927 | hypothetical protein | |
| PA14_07440 | -1 | 16 | -3.826463 | hypothetical protein | |
| PA14_07450 | 0 | 13 | -3.312208 | hypothetical protein | |
| PA14_07460 | 0 | 12 | -2.822176 | hypothetical protein | |
| PA14_07480 | 0 | 12 | -2.878645 | *reverse transcriptase | |
| PA14_07500 | 0 | 12 | -1.136342 | hypothetical protein | |
| PA14_07520 | 2 | 10 | -1.332646 | RNA polymerase sigma factor RpoD | |
| PA14_07530 | 1 | 9 | -0.014066 | DNA primase | |
| PA14_07550 | 0 | 12 | 0.570419 | hypothetical protein | |
| PA14_07560 | 1 | 11 | 0.914294 | 30S ribosomal protein S21 | |
| PA14_07570 | 0 | 10 | 1.401047 | DNA-binding/iron metalloprotein/AP endonuclease | |
| PA14_07580 | 0 | 8 | -0.798730 | glycerol-3-phosphate acyltransferase PlsY | |
| PA14_07590 | 0 | 8 | -1.735328 | dihydroneopterin aldolase | |
| PA14_07600 | 0 | 10 | -3.182092 | 2-amino-4-hydroxy-6- | |
| PA14_07620 | 1 | 13 | -3.125684 | multifunctional tRNA nucleotidyl | |
| PA14_07630 | 0 | 14 | -3.481939 | hypothetical protein | |
| PA14_07650 | 0 | 14 | -3.641383 | SpoVR family protein |
| 8 | PA14_07900 | PA14_08160 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_07900 | 2 | 12 | -1.765919 | ABC transporter permease | |
| PA14_07910 | 2 | 10 | -1.543706 | ribulose-phosphate 3-epimerase | |
| PA14_07930 | 1 | 11 | -1.494705 | phosphoglycolate phosphatase | |
| PA14_07940 | -1 | 12 | -0.923767 | anthranilate synthase component I | |
| PA14_07950 | -1 | 15 | -0.061275 | transcriptional regulator PrtN | |
| PA14_07960 | -1 | 16 | 0.412640 | transcriptional regulator PrtR | |
| PA14_07970 | -1 | 21 | 0.783858 | hypothetical protein | |
| PA14_07980 | -1 | 23 | -0.284895 | hypothetical protein | |
| PA14_07990 | -2 | 24 | -0.160967 | hypothetical protein | |
| PA14_08000 | 0 | 34 | -3.457362 | hypothetical protein | |
| PA14_08010 | 0 | 36 | -4.507067 | hypothetical protein | |
| PA14_08020 | 0 | 32 | -4.495051 | bacteriophage protein | |
| PA14_08030 | 0 | 30 | -4.646081 | phage baseplate assembly protein | |
| PA14_08040 | 1 | 31 | -4.859832 | phage tail protein | |
| PA14_08050 | 1 | 32 | -5.128056 | tail fiber protein | |
| PA14_08060 | -1 | 26 | -2.141377 | tail fiber assembly protein | |
| PA14_08070 | -1 | 21 | -0.959813 | phage tail sheath protein | |
| PA14_08090 | -1 | 25 | -0.790261 | phage tail tube protein | |
| PA14_08100 | 0 | 26 | -0.462534 | hypothetical protein | |
| PA14_08110 | 0 | 25 | -0.153597 | hypothetical protein | |
| PA14_08120 | 0 | 25 | 0.200118 | tail length determinator protein | |
| PA14_08130 | 3 | 24 | 0.710939 | hypothetical protein | |
| PA14_08140 | 2 | 29 | 0.405268 | hypothetical protein | |
| PA14_08150 | 1 | 25 | 0.078061 | phage late control gene D protein | |
| PA14_08160 | 3 | 25 | 0.041244 | lytic enzyme |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_08120 | PF07132 | 31 | 0.022 | Harpin protein (HrpN) | |
>PF07132#Harpin protein (HrpN) | |||||
| 9 | PA14_08270 | PA14_08360 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_08270 | 2 | 22 | -3.061870 | hypothetical protein | |
| PA14_08280 | 1 | 21 | -3.613841 | bacteriophage protein | |
| PA14_08300 | 1 | 20 | -3.425160 | phage-related protein, tail component | |
| PA14_08310 | 2 | 25 | -5.081058 | hypothetical protein | |
| PA14_08320 | 2 | 12 | -3.874631 | hypothetical protein | |
| PA14_08330 | 1 | 10 | -3.074356 | hypothetical protein | |
| PA14_08340 | 3 | 8 | -3.351800 | anthranilate synthase component II | |
| PA14_08350 | 3 | 6 | -2.912926 | anthranilate phosphoribosyltransferase | |
| PA14_08360 | 2 | 9 | -3.154715 | indole-3-glycerol-phosphate synthase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_08310 | ACRIFLAVINRP | 29 | 0.036 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| 10 | PA14_09530 | PA14_09680 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_09530 | -2 | 9 | 3.392382 | RND efflux membrane fusion protein | |
| PA14_09540 | -2 | 10 | 3.465393 | hypothetical protein | |
| PA14_09550 | -3 | 13 | 3.308248 | hypothetical protein | |
| PA14_09570 | -2 | 13 | 2.889677 | LysR family transcriptional regulator | |
| PA14_09580 | -2 | 11 | 3.413809 | hypothetical protein | |
| PA14_09600 | -2 | 11 | 2.941059 | D-alanine--D-alanine ligase | |
| PA14_09610 | -1 | 11 | 2.783088 | hypothetical protein | |
| PA14_09630 | -1 | 10 | 2.861292 | acyl-CoA dehydrogenase | |
| PA14_09660 | 0 | 10 | 3.046368 | acyl-CoA synthetase | |
| PA14_09680 | -1 | 10 | 3.335160 | two-component sensor |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_09530 | RTXTOXIND | 46 | 1e-07 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| 11 | PA14_09970 | PA14_10350 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_09970 | 2 | 11 | 1.937256 | type I ferripyoverdine receptor, FpvB | |
| PA14_09980 | 2 | 12 | 2.952502 | 2,5-diketo-D-gluconate reductase B | |
| PA14_09990 | 1 | 13 | 3.256146 | acetyltransferase | |
| PA14_10010 | 1 | 11 | 3.401612 | transcriptional regulator | |
| PA14_10020 | 2 | 10 | 2.552860 | hypothetical protein | |
| PA14_10040 | 1 | 10 | 2.533970 | amidase | |
| PA14_10050 | -1 | 12 | 1.383365 | hypothetical protein | |
| PA14_10070 | -1 | 12 | 1.822144 | zinc-dependent oxidoreductase | |
| PA14_10080 | 0 | 11 | 2.677137 | hypothetical protein | |
| PA14_10090 | 1 | 11 | 3.903263 | LysR family transcriptional regulator | |
| PA14_10110 | 0 | 9 | 4.235549 | transporter | |
| PA14_10120 | 1 | 9 | 4.593841 | LysR family transcriptional regulator | |
| PA14_10130 | 2 | 10 | 5.369406 | short chain dehydrogenase | |
| PA14_10140 | -1 | 13 | 3.682245 | ferric enterobactin transport protein FepG | |
| PA14_10160 | -1 | 12 | 3.090839 | ferric enterobactin transport protein FepD | |
| PA14_10170 | -1 | 12 | 2.188258 | iron-enterobactin transporter periplasmic | |
| PA14_10180 | -2 | 12 | 1.646202 | ferric enterobactin transport protein FepC | |
| PA14_10190 | -2 | 12 | 1.405537 | transcriptional regulator | |
| PA14_10200 | -1 | 12 | 1.051065 | TonB-dependent receptor protein | |
| PA14_10210 | -2 | 11 | 1.722442 | oxidoreductase | |
| PA14_10220 | -1 | 12 | 2.268524 | SH3 domain-containing protein | |
| PA14_10230 | 1 | 11 | 2.527910 | 2,3-butanediol dehydrogenase | |
| PA14_10240 | 1 | 8 | 3.276958 | branched-chain alpha-keto acid dehydrogenase | |
| PA14_10250 | 0 | 7 | 3.398393 | acetoin catabolism protein AcoB | |
| PA14_10260 | 1 | 8 | 3.490517 | dehydrogenase E1 component | |
| PA14_10270 | -1 | 10 | 4.145626 | hypothetical protein | |
| PA14_10280 | 0 | 10 | 2.828065 | short-chain dehydrogenase | |
| PA14_10290 | 1 | 11 | 2.535297 | transcriptional regulator AcoR | |
| PA14_10300 | 0 | 13 | 1.811870 | efflux protein | |
| PA14_10320 | -1 | 13 | 1.870679 | transcriptional regulator | |
| PA14_10330 | -1 | 14 | 1.573858 | outer membrane protein | |
| PA14_10340 | -3 | 11 | -0.103075 | toxin transporter | |
| PA14_10350 | 2 | 14 | -1.601374 | secretion protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_09990 | SACTRNSFRASE | 40 | 1e-06 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_10110 | TCRTETA | 50 | 6e-09 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_10130 | DHBDHDRGNASE | 120 | 3e-35 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_10160 | PF04335 | 30 | 0.011 | VirB8 type IV secretion protein | |
>PF04335#VirB8 type IV secretion protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_10170 | FERRIBNDNGPP | 37 | 6e-05 | Ferrichrome-binding periplasmic protein signature. | |
>FERRIBNDNGPP#Ferrichrome-binding periplasmic protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_10220 | DPTHRIATOXIN | 31 | 0.004 | Diphtheria toxin signature. | |
>DPTHRIATOXIN#Diphtheria toxin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_10280 | DHBDHDRGNASE | 127 | 2e-37 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_10290 | HTHFIS | 336 | e-111 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_10330 | GPOSANCHOR | 30 | 0.016 | Gram-positive coccus surface protein anchor signature. | |
>GPOSANCHOR#Gram-positive coccus surface protein anchor signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_10350 | RTXTOXIND | 155 | 7e-45 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| 12 | PA14_13200 | PA14_13420 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_13200 | 2 | 17 | 0.329446 | hypothetical protein | |
| PA14_13210 | 0 | 14 | 0.977229 | hypothetical protein | |
| PA14_13220 | -2 | 10 | 3.013040 | protein-tyrosine-phosphatase | |
| PA14_13230 | -2 | 11 | 3.479093 | molybdenum cofactor biosynthesis protein MoaC | |
| PA14_13240 | 0 | 10 | 3.108142 | molybdopterin converting factor, small subunit | |
| PA14_13250 | 0 | 11 | 3.606796 | molybdopterin converting factor, large subunit | |
| PA14_13260 | -1 | 9 | 3.157255 | MoaB1 | |
| PA14_13280 | -1 | 10 | 2.920080 | molybdenum cofactor biosynthetic protein A1 | |
| PA14_13290 | -1 | 10 | 1.938297 | protease | |
| PA14_13300 | -1 | 10 | 1.683141 | hypothetical protein | |
| PA14_13320 | 0 | 9 | 1.711886 | hypothetical protein | |
| PA14_13330 | 0 | 9 | 1.439341 | hypothetical protein | |
| PA14_13340 | 0 | 13 | 1.764050 | extracellular nuclease | |
| PA14_13350 | 2 | 13 | -0.184414 | hypothetical protein | |
| PA14_13360 | 1 | 12 | -0.059390 | hypothetical protein | |
| PA14_13370 | 1 | 14 | 0.500570 | hypothetical protein | |
| PA14_13380 | -1 | 15 | 1.562949 | hypothetical protein | |
| PA14_13390 | 0 | 17 | 1.552197 | hypothetical protein | |
| PA14_13410 | 0 | 16 | 1.511121 | peptide chain release factor 3 | |
| PA14_13420 | 3 | 15 | 2.516909 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_13360 | TONBPROTEIN | 30 | 0.008 | Gram-negative bacterial tonB protein signature. | |
>TONBPROTEIN#Gram-negative bacterial tonB protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_13410 | TCRTETOQM | 220 | 2e-66 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
| 13 | PA14_13560 | PA14_13670 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_13560 | 2 | 14 | 0.258838 | hypothetical protein | |
| PA14_13580 | 2 | 14 | 0.306591 | ABC transporter ATP-binding protein | |
| PA14_13590 | 1 | 12 | 1.138898 | ABC transporter permease | |
| PA14_13600 | 0 | 12 | 1.626200 | ABC transporter substrate-binding protein | |
| PA14_13610 | 1 | 11 | 2.039637 | ABC transporter permease | |
| PA14_13620 | 0 | 10 | 2.796722 | Na+/H+ antiporter NhaP | |
| PA14_13630 | 0 | 15 | 3.751617 | hypothetical protein | |
| PA14_13650 | 0 | 15 | 3.907775 | hypothetical protein | |
| PA14_13660 | 1 | 13 | 3.878183 | hypothetical protein | |
| PA14_13670 | 0 | 14 | 3.244078 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_13560 | RTXTOXIND | 50 | 6e-09 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| 14 | PA14_13850 | PA14_13940 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_13850 | -1 | 19 | -3.763265 | molybdenum cofactor biosynthesis protein A | |
| PA14_13860 | 2 | 49 | -8.799635 | hypothetical protein | |
| PA14_13870 | 3 | 56 | -10.854970 | hypothetical protein | |
| PA14_13880 | 3 | 59 | -10.909820 | hypothetical protein | |
| PA14_13890 | 4 | 60 | -10.771521 | integrase | |
| PA14_13920 | 3 | 53 | -10.201529 | hypothetical protein | |
| PA14_13940 | 2 | 41 | -8.382066 | S-type pyocin protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_13940 | PYOCINKILLER | 194 | 1e-56 | Pyocin S killer protein signature. | |
>PYOCINKILLER#Pyocin S killer protein signature. | |||||
| 15 | PA14_14500 | PA14_14750 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_14500 | -1 | 17 | -3.548877 | hypothetical protein | |
| PA14_14510 | -2 | 19 | -3.723230 | hypothetical protein | |
| PA14_14520 | -2 | 21 | -3.093387 | hypothetical protein | |
| PA14_14530 | -1 | 20 | -2.966848 | hypothetical protein | |
| PA14_14540 | 1 | 20 | -3.942549 | hypothetical protein | |
| PA14_14550 | 0 | 11 | -2.722518 | hypothetical protein | |
| PA14_14560 | 1 | 9 | -2.229714 | hypothetical protein | |
| PA14_14590 | 1 | 10 | -1.863595 | *S-adenosylmethionine--tRNA | |
| PA14_14600 | 1 | 13 | -2.214460 | queuine tRNA-ribosyltransferase | |
| PA14_14610 | 0 | 12 | -2.115036 | preprotein translocase subunit YajC | |
| PA14_14630 | 2 | 11 | -1.708767 | preprotein translocase subunit SecD | |
| PA14_14650 | 2 | 12 | -1.800328 | preprotein translocase subunit SecF | |
| PA14_14660 | 1 | 13 | -1.680271 | hypothetical protein | |
| PA14_14680 | 1 | 14 | -2.113196 | extragenic suppressor protein SuhB | |
| PA14_14690 | 1 | 15 | -2.721762 | methyltransferase | |
| PA14_14700 | 1 | 17 | -2.566320 | serine O-acetyltransferase | |
| PA14_14710 | 0 | 14 | -1.731793 | Rrf2 family protein | |
| PA14_14730 | 1 | 13 | -1.845052 | cysteine desulfurase | |
| PA14_14740 | 1 | 14 | -1.876629 | scaffold protein | |
| PA14_14750 | 3 | 17 | -1.992702 | iron-binding protein IscA |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_14630 | SECFTRNLCASE | 81 | 1e-18 | Bacterial translocase SecF protein signature. | |
>SECFTRNLCASE#Bacterial translocase SecF protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_14650 | SECFTRNLCASE | 301 | e-104 | Bacterial translocase SecF protein signature. | |
>SECFTRNLCASE#Bacterial translocase SecF protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_14690 | PHAGEIV | 29 | 0.021 | Gene IV protein signature. | |
>PHAGEIV#Gene IV protein signature. | |||||
| 16 | PA14_14990 | PA14_15620 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_14990 | 2 | 9 | -1.292769 | oxidoreductase | |
| PA14_15000 | 0 | 9 | -0.479281 | hypothetical protein | |
| PA14_15020 | -1 | 9 | -0.100141 | hypothetical protein | |
| PA14_15030 | -1 | 9 | 0.100781 | 2-isopropylmalate synthase | |
| PA14_15050 | -3 | 8 | 1.348077 | hypothetical protein | |
| PA14_15070 | -1 | 8 | 1.484216 | outer membrane copper receptor OprC | |
| PA14_15080 | 2 | 8 | 2.161419 | hypothetical protein | |
| PA14_15090 | 2 | 13 | 1.768490 | hypothetical protein | |
| PA14_15100 | 2 | 11 | 2.071154 | hypothetical protein | |
| PA14_15110 | 2 | 11 | 2.855627 | hypothetical protein | |
| PA14_15120 | 1 | 11 | 1.780685 | hypothetical protein | |
| PA14_15130 | 2 | 9 | 1.858988 | hypothetical protein | |
| PA14_15140 | 1 | 10 | 1.822144 | hypothetical protein | |
| PA14_15150 | 2 | 11 | 2.221981 | transcriptional regulator | |
| PA14_15160 | 1 | 11 | 2.383909 | hypothetical protein | |
| PA14_15180 | 1 | 12 | 2.329300 | transporter | |
| PA14_15190 | 1 | 11 | 2.885902 | hypothetical protein | |
| PA14_15200 | 0 | 10 | 3.025797 | hypothetical protein | |
| PA14_15210 | 0 | 10 | 3.599014 | LysR family transcriptional regulator | |
| PA14_15230 | 0 | 10 | 3.319941 | exodeoxyribonuclease VII large subunit | |
| PA14_15240 | 0 | 11 | 2.593318 | LysR family transcriptional regulator | |
| PA14_15250 | -2 | 11 | 1.893897 | hypothetical protein | |
| PA14_15260 | 0 | 14 | 1.311604 | acetylpolyamine aminohydrolase | |
| PA14_15270 | 0 | 10 | 0.159235 | hypothetical protein | |
| PA14_15280 | 0 | 8 | -1.800396 | hypothetical protein | |
| PA14_15290 | 1 | 10 | -2.256354 | transcriptional regulator | |
| PA14_15310 | 0 | 13 | -2.618930 | inosine 5'-monophosphate dehydrogenase | |
| PA14_15340 | -1 | 23 | -4.213022 | GMP synthase | |
| PA14_15350 | -1 | 34 | -5.442500 | integrase | |
| PA14_15360 | 0 | 39 | -5.664599 | hypothetical protein | |
| PA14_15370 | 0 | 35 | -4.719980 | hypothetical protein | |
| PA14_15380 | 1 | 33 | -4.001670 | replicative helicase, RepA | |
| PA14_15400 | 2 | 29 | -3.382914 | replication protein, RepC | |
| PA14_15430 | 4 | 24 | -2.512102 | resolvase, essential for transposition | |
| PA14_15435 | 4 | 27 | -2.428766 | hypothetical protein | |
| PA14_15445 | 4 | 24 | -2.222188 | mercury resistance protein | |
| PA14_15450 | 5 | 26 | -2.926586 | transcriptional regulator MerD | |
| PA14_15460 | 5 | 27 | -4.018577 | mercuric reductase | |
| PA14_15470 | 4 | 34 | -6.519082 | periplasmic mercuric ion binding protein, MerP | |
| PA14_15475 | 4 | 32 | -6.313232 | mercuric transport protein | |
| PA14_15480 | 4 | 28 | -5.865308 | transcriptional regulator MerR | |
| PA14_15490 | 4 | 26 | -3.688174 | hypothetical protein | |
| PA14_15500 | 2 | 24 | -2.879884 | oriT-binding protein, TraK | |
| PA14_15510 | 1 | 24 | -2.775755 | conjugal transfer relaxosome component TraJ | |
| PA14_15520 | 0 | 27 | -5.306174 | conjugal transfer protein TrbJ | |
| PA14_15530 | -1 | 28 | -5.876600 | entry/exclusion protein TrbK | |
| PA14_15540 | 0 | 28 | -5.850777 | mating pair formation protein TrbL | |
| PA14_15560 | 1 | 33 | -6.175896 | hypothetical protein | |
| PA14_15570 | 1 | 32 | -5.721931 | hypothetical protein | |
| PA14_15580 | 2 | 33 | -5.584499 | Type II restriction enzyme, methylase subunit | |
| PA14_15590 | 2 | 32 | -4.469956 | hypothetical protein | |
| PA14_15600 | 3 | 34 | -3.262493 | hypothetical protein | |
| PA14_15610 | 1 | 29 | -2.504879 | hypothetical protein | |
| PA14_15620 | 2 | 22 | -1.633393 | oxidoreductase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_15140 | ISCHRISMTASE | 31 | 0.004 | Isochorismatase signature. | |
>ISCHRISMTASE#Isochorismatase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_15180 | RTXTOXINA | 33 | 0.004 | Gram-negative bacterial RTX toxin determinant A family... | |
>RTXTOXINA#Gram-negative bacterial RTX toxin determinant A family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_15540 | ICENUCLEATIN | 33 | 0.004 | Ice nucleation protein signature. | |
>ICENUCLEATIN#Ice nucleation protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_15620 | DHBDHDRGNASE | 55 | 4e-11 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| 17 | PA14_16890 | PA14_17210 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_16890 | 2 | 7 | 1.660076 | auxiliary component of ABC transporter | |
| PA14_16910 | 3 | 10 | 1.869964 | hypothetical protein | |
| PA14_16920 | 3 | 14 | 1.702261 | hypothetical protein | |
| PA14_16930 | 1 | 12 | 1.275475 | pyridoxal-phosphate dependent protein | |
| PA14_16950 | 1 | 13 | 0.079049 | tetrahydrodipicolinate succinylase | |
| PA14_16960 | 2 | 9 | 0.445173 | amino acid transporter LysE | |
| PA14_16970 | -2 | 9 | 0.396875 | arsenate reductase | |
| PA14_16980 | -1 | 10 | -0.567658 | hypothetical protein | |
| PA14_16990 | 0 | 11 | -1.083846 | hypothetical protein | |
| PA14_17000 | 0 | 11 | -1.498485 | hypothetical protein | |
| PA14_17010 | -1 | 11 | -1.903775 | Na(+)/H(+) exchanger protein | |
| PA14_17030 | -1 | 13 | -2.608239 | succinyldiaminopimelate transaminase | |
| PA14_17040 | 0 | 13 | -3.598467 | PII uridylyl-transferase | |
| PA14_17050 | 3 | 16 | -3.826463 | methionine aminopeptidase | |
| PA14_17060 | 1 | 14 | -2.753184 | 30S ribosomal protein S2 | |
| PA14_17070 | 2 | 9 | -1.206167 | elongation factor Ts | |
| PA14_17080 | 0 | 11 | -0.677608 | uridylate kinase | |
| PA14_17100 | -2 | 10 | -1.669258 | ribosome recycling factor | |
| PA14_17110 | -1 | 9 | -1.879339 | UDP pyrophosphate synthetase | |
| PA14_17120 | -1 | 9 | -1.934333 | phosphatidate cytidylyltransferase | |
| PA14_17130 | 0 | 9 | -2.760192 | 1-deoxy-D-xylulose 5-phosphate reductoisomerase | |
| PA14_17140 | 1 | 10 | -3.547645 | membrane-associated zinc metalloprotease | |
| PA14_17150 | 0 | 11 | -3.137394 | outer membrane antigen | |
| PA14_17170 | 3 | 12 | -2.151081 | hypothetical protein | |
| PA14_17180 | 3 | 10 | -1.723485 | UDP-3-O-[3-hydroxymyristoyl] glucosamine | |
| PA14_17190 | 2 | 10 | -2.037662 | (3R)-hydroxymyristoyl-ACP dehydratase | |
| PA14_17210 | 2 | 10 | -1.834265 | UDP-N-acetylglucosamine acyltransferase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_16950 | FERRIBNDNGPP | 29 | 0.031 | Ferrichrome-binding periplasmic protein signature. | |
>FERRIBNDNGPP#Ferrichrome-binding periplasmic protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_17040 | YERSSTKINASE | 32 | 0.013 | Yersinia serine/threonine protein kinase signature. | |
>YERSSTKINASE#Yersinia serine/threonine protein kinase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_17080 | CARBMTKINASE | 37 | 3e-05 | Bacterial carbamate kinase signature. | |
>CARBMTKINASE#Bacterial carbamate kinase signature. | |||||
| 18 | PA14_18140 | PA14_18410 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_18140 | -2 | 10 | 3.085978 | 3-hydroxyisobutyrate dehydrogenase | |
| PA14_18150 | -1 | 10 | 3.066876 | acetyl-coa synthetase | |
| PA14_18160 | -1 | 10 | 4.283426 | oxidoreductase | |
| PA14_18180 | 0 | 11 | 4.792903 | hypothetical protein | |
| PA14_18200 | -1 | 11 | 5.039546 | LysR family transcriptional regulator | |
| PA14_18210 | -1 | 11 | 4.251252 | TatD family deoxyribonuclease | |
| PA14_18230 | -1 | 10 | 4.190226 | DNA-binding transcriptional regulator FruR | |
| PA14_18250 | 0 | 11 | 4.352211 | phosphotransferase system enzyme I | |
| PA14_18260 | 1 | 12 | 3.556897 | 1-phosphofructokinase | |
| PA14_18275 | 2 | 12 | 3.714521 | phosphotransferase system, fructose-specific | |
| PA14_18300 | 1 | 13 | 2.829361 | nucleotide sugar dehydrogenase | |
| PA14_18310 | 2 | 15 | 3.408810 | hypothetical protein | |
| PA14_18320 | 0 | 15 | 3.211315 | hypothetical protein | |
| PA14_18330 | 0 | 16 | 2.523104 | 4-amino-4-deoxy-L-arabinose transferase | |
| PA14_18340 | -1 | 17 | 2.267323 | hypothetical protein | |
| PA14_18350 | -1 | 17 | 1.698659 | bifunctional UDP-glucuronic acid | |
| PA14_18360 | -1 | 19 | 0.875140 | glycosyl transferase family protein | |
| PA14_18370 | 0 | 18 | 0.636074 | UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate | |
| PA14_18380 | 2 | 19 | 0.141128 | mannose-1-phosphate guanylyltransferase | |
| PA14_18410 | 2 | 19 | 0.078456 | alginate o-acetyltransferase AlgF |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_18250 | PHPHTRNFRASE | 608 | 0.0 | Phosphoenolpyruvate-protein phosphotransferase sign... | |
>PHPHTRNFRASE#Phosphoenolpyruvate-protein phosphotransferase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_18350 | NUCEPIMERASE | 109 | 2e-28 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| 19 | PA14_19830 | PA14_20120 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_19830 | -2 | 12 | 3.596488 | hypothetical protein | |
| PA14_19850 | -1 | 11 | 4.497904 | transcriptional regulator | |
| PA14_19860 | -1 | 9 | 4.193028 | hypothetical protein | |
| PA14_19870 | -1 | 10 | 4.441676 | leucine dehydrogenase | |
| PA14_19900 | -3 | 9 | 3.858780 | pyruvate dehydrogenase E1 component subunit | |
| PA14_19910 | -3 | 9 | 3.481140 | pyruvate dehydrogenase E1 component, beta chain | |
| PA14_19920 | 0 | 13 | 3.420563 | branched-chain alpha-keto acid dehydrogenase | |
| PA14_19930 | 2 | 14 | 2.078980 | hypothetical protein | |
| PA14_19940 | -1 | 11 | 3.720651 | hypothetical protein | |
| PA14_19950 | -1 | 12 | 1.996614 | hypothetical protein | |
| PA14_19960 | 1 | 12 | 2.339125 | hypothetical protein | |
| PA14_19970 | 0 | 12 | 3.287847 | hypothetical protein | |
| PA14_19990 | 1 | 11 | 3.446869 | RNA polymerase ECF-subfamily sigma-70 factor | |
| PA14_20000 | 2 | 12 | 3.765639 | transmembrane sensor | |
| PA14_20010 | 2 | 11 | 3.047212 | heme uptake outer membrane receptor HasR | |
| PA14_20020 | 2 | 13 | 3.545704 | heme acquisition protein HasAp | |
| PA14_20030 | 1 | 13 | 3.522474 | transport protein HasD | |
| PA14_20040 | 1 | 13 | 2.279922 | metalloprotease secretion protein | |
| PA14_20050 | 2 | 15 | 1.041513 | outer membrane protein | |
| PA14_20060 | 1 | 15 | 0.065917 | hypothetical protein | |
| PA14_20070 | 1 | 16 | 0.621430 | hypothetical protein | |
| PA14_20080 | 1 | 17 | 0.273195 | hypothetical protein | |
| PA14_20100 | 2 | 17 | 0.463120 | hypothetical protein | |
| PA14_20110 | 2 | 18 | 1.177517 | hypothetical protein | |
| PA14_20120 | 2 | 16 | 2.868039 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_19870 | DHBDHDRGNASE | 28 | 0.032 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_20020 | PF06438 | 276 | 1e-97 | Heme acquisition protein HasAp | |
>PF06438#Heme acquisition protein HasAp | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_20040 | RTXTOXIND | 416 | e-145 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_20050 | RTXTOXIND | 31 | 0.008 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_20080 | RTXTOXIND | 56 | 6e-11 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_20110 | ABC2TRNSPORT | 28 | 0.039 | ABC-2 type transport system membrane protein signat... | |
>ABC2TRNSPORT#ABC-2 type transport system membrane protein | |||||
| 20 | PA14_20400 | PA14_20520 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_20400 | 1 | 9 | 3.094952 | phosphonate C-P lyase system protein PhnK | |
| PA14_20420 | 1 | 9 | 2.823863 | phosphonate ABC transporter ATPase | |
| PA14_20430 | 2 | 13 | 2.484894 | phosphonate metabolism protein | |
| PA14_20440 | 1 | 14 | 2.592902 | phosphonate transport ATP-binding protein | |
| PA14_20450 | 1 | 17 | -1.538688 | carbon-phosphorus lyase complex accessory | |
| PA14_20460 | 5 | 23 | -2.660264 | hypothetical protein | |
| PA14_20470 | 4 | 28 | -4.813206 | hypothetical protein | |
| PA14_20480 | 4 | 27 | -4.723481 | hypothetical protein | |
| PA14_20491 | 4 | 22 | -4.540932 | acetyltransferase | |
| PA14_20510 | 3 | 19 | -4.081455 | *hypothetical protein | |
| PA14_20520 | 2 | 15 | -2.590782 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_20420 | PF05272 | 33 | 8e-04 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_20491 | SACTRNSFRASE | 56 | 1e-12 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| 21 | PA14_21440 | PA14_21580 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_21440 | 4 | 27 | -4.475599 | HIT family protein | |
| PA14_21450 | 4 | 26 | -4.136807 | hypothetical protein | |
| PA14_21460 | 6 | 36 | -5.726616 | hypothetical protein | |
| PA14_21470 | 6 | 38 | -6.156402 | hypothetical protein | |
| PA14_21480 | 3 | 25 | -4.733385 | hypothetical protein | |
| PA14_21490 | 1 | 17 | -2.740448 | hypothetical protein | |
| PA14_21510 | -1 | 12 | 0.795592 | hypothetical protein | |
| PA14_21520 | 0 | 13 | 0.426386 | hypothetical protein | |
| PA14_21530 | -1 | 13 | -0.113389 | ankyrin domain-containing protein | |
| PA14_21540 | 0 | 14 | -0.305120 | 3-oxoacyl-ACP synthase | |
| PA14_21550 | 1 | 16 | -0.192889 | RNA polymerase ECF-subfamily sigma-70 factor | |
| PA14_21560 | 1 | 12 | -1.584973 | hypothetical protein | |
| PA14_21570 | 2 | 13 | -2.024433 | hypothetical protein | |
| PA14_21580 | 2 | 12 | -2.010096 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_21520 | ISCHRISMTASE | 29 | 0.010 | Isochorismatase signature. | |
>ISCHRISMTASE#Isochorismatase signature. | |||||
| 22 | PA14_22050 | PA14_22280 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_22050 | 2 | 33 | -5.532778 | lipid A biosynthesis lauroyl acyltransferase | |
| PA14_22060 | 4 | 47 | -8.614337 | hypothetical protein | |
| PA14_22075 | 5 | 64 | -12.409124 | pirin-related protein | |
| PA14_22080 | 6 | 72 | -14.317780 | resolvase | |
| PA14_22090 | 6 | 74 | -14.929016 | hypothetical protein | |
| PA14_22100 | 6 | 75 | -15.583288 | hypothetical protein | |
| PA14_22110 | 6 | 74 | -15.521921 | hypothetical protein | |
| PA14_22120 | 6 | 73 | -15.097347 | hypothetical protein | |
| PA14_22130 | 9 | 68 | -16.479307 | hypothetical protein | |
| PA14_22140 | 10 | 66 | -16.033217 | hypothetical protein | |
| PA14_22160 | 12 | 61 | -16.777810 | hypothetical protein | |
| PA14_22180 | 10 | 64 | -15.535418 | hypothetical protein | |
| PA14_22190 | 11 | 68 | -15.801975 | hypothetical protein | |
| PA14_22210 | 12 | 72 | -16.398460 | hypothetical protein | |
| PA14_22220 | 12 | 68 | -14.474451 | hypothetical protein | |
| PA14_22230 | 11 | 65 | -13.410521 | hypothetical protein | |
| PA14_22240 | 9 | 52 | -10.709656 | hypothetical protein | |
| PA14_22250 | 6 | 35 | -8.315202 | hypothetical protein | |
| PA14_22260 | 5 | 28 | -6.845073 | hypothetical protein | |
| PA14_22270 | 3 | 21 | -5.441306 | recombinase | |
| PA14_22280 | 0 | 13 | -3.156865 | pirin-related protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_22100 | VACJLIPOPROT | 29 | 0.017 | VacJ lipoprotein signature. | |
>VACJLIPOPROT#VacJ lipoprotein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_22120 | PYOCINKILLER | 40 | 3e-05 | Pyocin S killer protein signature. | |
>PYOCINKILLER#Pyocin S killer protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_22230 | 56KDTSANTIGN | 25 | 0.035 | Rickettsia 56kDa type-specific antigen protein sign... | |
>56KDTSANTIGN#Rickettsia 56kDa type-specific antigen protein | |||||
| 23 | PA14_22680 | PA14_22830 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_22680 | 2 | 12 | 2.028174 | ABC transporter permease | |
| PA14_22690 | 2 | 13 | 1.986822 | potassium uptake protein TrkH | |
| PA14_22700 | 3 | 14 | 3.393611 | ferredoxin | |
| PA14_22710 | 4 | 14 | 3.318802 | hypothetical protein | |
| PA14_22720 | 4 | 15 | 2.828140 | hypothetical protein | |
| PA14_22730 | 2 | 16 | 0.932080 | two-component sensor | |
| PA14_22740 | 1 | 13 | 0.390756 | hypothetical protein | |
| PA14_22760 | 0 | 13 | 0.384501 | two-component response regulator | |
| PA14_22770 | 1 | 13 | -0.592762 | hypothetical protein | |
| PA14_22780 | 3 | 11 | 0.132730 | YciI-like protein | |
| PA14_22800 | 3 | 11 | -0.389519 | intracellular septation protein A | |
| PA14_22820 | 3 | 13 | 0.396076 | PHP domain-containing protein | |
| PA14_22830 | 2 | 12 | -0.010202 | SUA5/yciO/yrdC family:Sua5/YciO/YrdC/YwlC family |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_22730 | PF06580 | 30 | 0.016 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_22760 | HTHFIS | 103 | 9e-28 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_22770 | IGASERPTASE | 28 | 0.010 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_22780 | adhesinmafb | 30 | 9e-04 | Neisseria meningitidis: adhesin MafB signature. | |
>adhesinmafb#Neisseria meningitidis: adhesin MafB signature. | |||||
| 24 | PA14_23200 | PA14_23460 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_23200 | 2 | 12 | 0.076186 | short chain dehydrogenase | |
| PA14_23210 | 2 | 11 | -0.265708 | phosphoglycolate phosphatase | |
| PA14_23220 | 2 | 10 | -0.910113 | 3-demethylubiquinone-9 3-methyltransferase | |
| PA14_23240 | 1 | 10 | -0.783788 | N-ethylammeline chlorohydrolase | |
| PA14_23250 | 1 | 12 | -0.903085 | methylthioribose-1-phosphate isomerase | |
| PA14_23260 | 1 | 12 | -0.997816 | DNA gyrase subunit A | |
| PA14_23270 | 1 | 13 | -2.289312 | phosphoserine aminotransferase | |
| PA14_23280 | 2 | 15 | -2.392266 | chorismate mutase | |
| PA14_23290 | 2 | 17 | -2.472734 | histidinol-phosphate aminotransferase | |
| PA14_23310 | 2 | 26 | -5.333053 | bifunctional cyclohexadienyl dehydrogenase/ | |
| PA14_23320 | 3 | 44 | -10.204317 | cytidylate kinase | |
| PA14_23330 | 3 | 59 | -13.617242 | 30S ribosomal protein S1 | |
| PA14_23340 | 6 | 90 | -18.971007 | integration host factor subunit beta | |
| PA14_23350 | 8 | 99 | -21.902111 | hypothetical protein | |
| PA14_23360 | 8 | 102 | -23.002806 | O-antigen chain length regulator | |
| PA14_23370 | 6 | 100 | -22.267319 | UDP-N-acetylglucosamine 2-epimerase | |
| PA14_23380 | 6 | 101 | -22.178448 | UDP-N-acetyl-D-mannosaminuronate dehydrogenase | |
| PA14_23390 | 7 | 102 | -22.574161 | polysaccharide biosynthesis protein | |
| PA14_23400 | 6 | 96 | -21.101426 | hypothetical protein | |
| PA14_23410 | 4 | 93 | -18.990528 | glycosyl transferase family protein | |
| PA14_23420 | 2 | 73 | -15.088655 | zinc-binding dehydrogenase | |
| PA14_23430 | 3 | 68 | -13.996434 | heparinase | |
| PA14_23440 | 2 | 49 | -10.783720 | group 1 glycosyl transferase | |
| PA14_23450 | 0 | 29 | -6.804764 | NAD dependent epimerase/dehydratase | |
| PA14_23460 | 0 | 17 | -4.746729 | group 4 glycosyl transferase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_23200 | DHBDHDRGNASE | 91 | 4e-24 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_23240 | UREASE | 37 | 2e-04 | Urea amidohydrolase (urease) protein signature. | |
>UREASE#Urea amidohydrolase (urease) protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_23340 | DNABINDINGHU | 118 | 1e-38 | Prokaryotic integration host factor signature. | |
>DNABINDINGHU#Prokaryotic integration host factor signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_23400 | ACRIFLAVINRP | 29 | 0.036 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_23450 | NUCEPIMERASE | 101 | 1e-26 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| 25 | PA14_24990 | PA14_25590 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_24990 | 2 | 10 | -0.459559 | hypothetical protein | |
| PA14_25000 | 1 | 9 | -0.669895 | lytic transglycosylase | |
| PA14_25020 | 0 | 9 | -1.849526 | ABC transporter ATP-binding protein | |
| PA14_25030 | 0 | 10 | -2.426921 | hypothetical protein | |
| PA14_25040 | 0 | 11 | -2.552756 | hypothetical protein | |
| PA14_25050 | 1 | 10 | -2.818764 | hypothetical protein | |
| PA14_25060 | 1 | 10 | -3.169947 | hypothetical protein | |
| PA14_25080 | 2 | 11 | -3.397548 | multifunctional fatty acid oxidation complex | |
| PA14_25090 | 0 | 12 | -2.939304 | 3-ketoacyl-CoA thiolase | |
| PA14_25100 | 1 | 11 | -2.899442 | hypothetical protein | |
| PA14_25110 | 2 | 9 | -2.538119 | DNA topoisomerase I | |
| PA14_25130 | 4 | 15 | -1.068379 | hypothetical protein | |
| PA14_25140 | 4 | 15 | -0.464603 | hypothetical protein | |
| PA14_25150 | 3 | 14 | 0.011163 | hypothetical protein | |
| PA14_25160 | 1 | 9 | 0.097956 | LexA repressor | |
| PA14_25180 | -1 | 10 | -0.379177 | transcriptional regulator PsrA | |
| PA14_25195 | -1 | 9 | -0.856575 | beta-hexosaminidase | |
| PA14_25210 | -1 | 9 | -1.113058 | 5'-methylthioadenosine phosphorylase | |
| PA14_25220 | -1 | 10 | -1.366921 | hypothetical protein | |
| PA14_25230 | -1 | 9 | -1.421851 | transcription-repair coupling factor | |
| PA14_25250 | 2 | 11 | -2.559076 | glyceraldehyde-3-phosphate dehydrogenase | |
| PA14_25270 | 2 | 11 | -2.491432 | aromatic amino acid transport protein AroP1 | |
| PA14_25280 | 1 | 11 | -2.100676 | Na(+)-translocating NADH-quinone reductase | |
| PA14_25305 | 0 | 12 | -1.987044 | Na(+)-translocating NADH-quinone reductase | |
| PA14_25320 | 0 | 14 | -2.142321 | Na(+)-translocating NADH-quinone reductase | |
| PA14_25330 | 1 | 13 | -2.927045 | Na(+)-translocating NADH-quinone reductase | |
| PA14_25340 | 1 | 12 | -2.153548 | Na(+)-translocating NADH-quinone reductase | |
| PA14_25350 | 2 | 10 | -1.678869 | Na(+)-translocating NADH-quinone reductase | |
| PA14_25360 | 2 | 11 | -1.601244 | thiamine biosynthesis lipoprotein | |
| PA14_25370 | 1 | 12 | -2.436313 | hypothetical protein | |
| PA14_25390 | -1 | 11 | -1.852002 | soluble pyridine nucleotide transhydrogenase | |
| PA14_25400 | 1 | 12 | -1.404792 | phosphodiesterase | |
| PA14_25410 | 2 | 13 | -1.883173 | hypothetical protein | |
| PA14_25420 | 2 | 15 | 0.072721 | hypothetical protein | |
| PA14_25430 | 3 | 14 | 0.154429 | hypothetical protein | |
| PA14_25440 | 3 | 15 | 0.674731 | lipoprotein releasing system, ATP-binding | |
| PA14_25450 | 3 | 16 | 0.871518 | hypothetical protein | |
| PA14_25470 | 3 | 18 | 1.519576 | hypothetical protein | |
| PA14_25480 | 2 | 17 | 1.898525 | competence protein | |
| PA14_25490 | 2 | 12 | -0.080805 | tolQ-type transport protein | |
| PA14_25500 | 0 | 17 | 0.082771 | hypothetical protein | |
| PA14_25510 | 3 | 17 | 0.564441 | tetraacyldisaccharide 4'-kinase | |
| PA14_25520 | 3 | 18 | 0.097610 | hypothetical protein | |
| PA14_25530 | 4 | 17 | 0.072508 | 3-deoxy-manno-octulosonate cytidylyltransferase | |
| PA14_25540 | 3 | 16 | -0.705301 | phosphotyrosine protein phosphatase | |
| PA14_25550 | 3 | 15 | -0.617294 | UDP-N-acetylenolpyruvoylglucosamine reductase | |
| PA14_25560 | 4 | 16 | -1.047309 | ribonuclease E | |
| PA14_25580 | 1 | 21 | -3.000718 | ribosomal large subunit pseudouridine synthase | |
| PA14_25590 | 1 | 23 | -3.009328 | hydrolase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_25020 | RTXTOXIND | 32 | 0.009 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_25040 | SHAPEPROTEIN | 27 | 0.019 | Bacterial cell shape determinant MreB/Mbl protein s... | |
>SHAPEPROTEIN#Bacterial cell shape determinant MreB/Mbl protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_25180 | HTHTETR | 69 | 2e-16 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_25510 | ENTSNTHTASED | 29 | 0.022 | Enterobactin synthetase component D signature. | |
>ENTSNTHTASED#Enterobactin synthetase component D signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_25560 | IGASERPTASE | 56 | 9e-10 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| 26 | PA14_25810 | PA14_26140 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_25810 | 2 | 15 | -1.853068 | hypothetical protein | |
| PA14_25820 | 3 | 16 | -2.013435 | lipoprotein | |
| PA14_25830 | 3 | 16 | -1.756510 | hypothetical protein | |
| PA14_25840 | 2 | 16 | -1.439665 | electron transfer flavoprotein-ubiquinone | |
| PA14_25860 | 2 | 15 | -0.352487 | electron transfer flavoprotein subunit beta | |
| PA14_25880 | 0 | 13 | 1.073981 | electron transfer flavoprotein subunit alpha | |
| PA14_25900 | 0 | 11 | 1.224851 | trans-2-enoyl-CoA reductase | |
| PA14_25910 | -2 | 5 | 2.870830 | lipase | |
| PA14_25920 | -3 | 6 | 3.215301 | precorrin-3 methylase | |
| PA14_25930 | -2 | 5 | 3.532047 | hypothetical protein | |
| PA14_25940 | -2 | 5 | 3.598818 | hypothetical protein | |
| PA14_25960 | -2 | 6 | 3.271151 | cobalamin biosynthesis protein cobW | |
| PA14_25970 | -3 | 7 | 2.730512 | cobaltochelatase subunit CobN | |
| PA14_25980 | -1 | 9 | 1.758001 | phospho-2-dehydro-3-deoxyheptonate aldolase | |
| PA14_25990 | 0 | 9 | 1.398661 | magnesium chelatase | |
| PA14_26000 | -1 | 11 | 0.704728 | magnesium chelatase | |
| PA14_26010 | 0 | 12 | -0.196033 | acyl-CoA thiolase | |
| PA14_26020 | -1 | 14 | -0.936087 | aminopeptidase | |
| PA14_26050 | 2 | 10 | 0.962985 | transporter | |
| PA14_26060 | 0 | 9 | 2.235280 | hypothetical protein | |
| PA14_26070 | -1 | 8 | 2.472877 | hypothetical protein | |
| PA14_26080 | -1 | 8 | 3.008243 | hypothetical protein | |
| PA14_26090 | -1 | 8 | 3.203338 | hydrolase | |
| PA14_26110 | -1 | 8 | 4.058151 | MFS transporter | |
| PA14_26130 | -1 | 8 | 3.494523 | morphinone reductase | |
| PA14_26140 | 0 | 8 | 3.201605 | transcriptional regulator |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_25860 | ALARACEMASE | 28 | 0.045 | Alanine racemase signature. | |
>ALARACEMASE#Alanine racemase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_25990 | HTHFIS | 49 | 1e-08 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_26110 | TCRTETA | 42 | 3e-06 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_26140 | HTHTETR | 55 | 1e-11 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| 27 | PA14_26300 | PA14_26500 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_26300 | 2 | 13 | 3.323715 | hypothetical protein | |
| PA14_26310 | 2 | 12 | 3.214671 | short chain dehydrogenase | |
| PA14_26330 | 2 | 13 | 4.160297 | AraC family transcriptional regulator | |
| PA14_26340 | 1 | 15 | 3.280832 | hypothetical protein | |
| PA14_26350 | 0 | 15 | 2.839025 | hypothetical protein | |
| PA14_26360 | 0 | 14 | 3.549106 | ABC transporter permease | |
| PA14_26390 | -2 | 14 | 3.301237 | hypothetical protein | |
| PA14_26400 | -1 | 14 | 4.140139 | ABC transporter ATP-binding protein | |
| PA14_26420 | -2 | 10 | 4.440465 | TonB-dependent receptor | |
| PA14_26450 | 2 | 8 | 5.779452 | hypothetical protein | |
| PA14_26460 | 0 | 9 | 5.761903 | cobalt-precorrin-6x reductase | |
| PA14_26470 | 1 | 9 | 5.831799 | cobalt-precorrin-6A synthase | |
| PA14_26480 | -1 | 9 | 5.262635 | precorrin-6y-dependent methyltransferase CobL | |
| PA14_26485 | -2 | 11 | 4.441964 | oxidoreductase | |
| PA14_26500 | -2 | 10 | 3.330756 | precorrin-8X methylmutase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_26310 | DHBDHDRGNASE | 71 | 9e-17 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_26330 | PF05272 | 28 | 0.034 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_26390 | FERRIBNDNGPP | 38 | 3e-05 | Ferrichrome-binding periplasmic protein signature. | |
>FERRIBNDNGPP#Ferrichrome-binding periplasmic protein signature. | |||||
| 28 | PA14_26750 | PA14_26910 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_26750 | 2 | 12 | 1.612697 | hypothetical protein | |
| PA14_26760 | 3 | 13 | 0.631026 | transcriptional regulator | |
| PA14_26770 | 1 | 12 | 1.349938 | hypothetical protein | |
| PA14_26780 | 0 | 12 | 1.561272 | hypothetical protein | |
| PA14_26810 | -1 | 11 | 1.799275 | two-component sensor | |
| PA14_26830 | -1 | 11 | 1.965204 | two-component response regulator | |
| PA14_26850 | -2 | 8 | 2.050005 | hypothetical protein | |
| PA14_26860 | -1 | 10 | 3.186686 | LysR family transcriptional regulator | |
| PA14_26870 | 0 | 12 | 2.820776 | hypothetical protein | |
| PA14_26880 | 2 | 14 | 3.253618 | LysR family transcriptional regulator | |
| PA14_26890 | 1 | 14 | 3.324609 | orotidine 5'-phosphate decarboxylase | |
| PA14_26910 | 2 | 12 | 3.104893 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_26760 | HTHTETR | 70 | 3e-17 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_26810 | PF06580 | 47 | 8e-08 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_26830 | HTHFIS | 98 | 5e-25 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_26910 | HTHFIS | 32 | 0.003 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 29 | PA14_27900 | PA14_27990 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_27900 | -1 | 13 | -3.254206 | transcriptional regulator | |
| PA14_27910 | 0 | 12 | -3.650927 | hypothetical protein | |
| PA14_27920 | -2 | 9 | -2.863592 | hypothetical protein | |
| PA14_27930 | 0 | 29 | -6.454623 | hypothetical protein | |
| PA14_27940 | 0 | 27 | -6.287254 | two-component response regulator | |
| PA14_27950 | 0 | 28 | -6.370888 | hypothetical protein | |
| PA14_27960 | 0 | 30 | -6.249918 | transaldolase B | |
| PA14_27980 | 1 | 38 | -7.375856 | tRNA-dihydrouridine synthase A | |
| PA14_27990 | 1 | 36 | -6.632510 | sialidase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_27920 | VACJLIPOPROT | 271 | 2e-94 | VacJ lipoprotein signature. | |
>VACJLIPOPROT#VacJ lipoprotein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_27940 | HTHFIS | 111 | 6e-29 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 30 | PA14_28620 | PA14_28895 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_28620 | -1 | 14 | -3.443103 | hypothetical protein | |
| PA14_28630 | -1 | 13 | -3.729109 | hydrolase | |
| PA14_28650 | 0 | 11 | -3.281510 | threonyl-tRNA synthetase | |
| PA14_28660 | 1 | 15 | -3.429220 | translation initiation factor IF-3 | |
| PA14_28670 | 1 | 13 | -2.618078 | 50S ribosomal protein L35 | |
| PA14_28680 | 1 | 13 | -2.905091 | 50S ribosomal protein L20 | |
| PA14_28690 | 0 | 14 | -3.185643 | phenylalanyl-tRNA synthetase subunit alpha | |
| PA14_28710 | 1 | 30 | -7.550352 | phenylalanyl-tRNA synthetase subunit beta | |
| PA14_28720 | 3 | 52 | -13.077438 | integration host factor subunit alpha | |
| PA14_28730 | 3 | 55 | -13.487065 | transcriptional regulator | |
| PA14_28750 | 4 | 61 | -13.350492 | *hypothetical protein | |
| PA14_28760 | 0 | 53 | -10.993619 | hypothetical protein | |
| PA14_28770 | 0 | 56 | -11.233018 | hypothetical protein | |
| PA14_28780 | 0 | 55 | -10.009430 | hypothetical protein | |
| PA14_28790 | 0 | 58 | -10.237978 | hypothetical protein | |
| PA14_28800 | 0 | 58 | -10.155367 | hypothetical protein | |
| PA14_28810 | 0 | 57 | -10.072078 | DNA helicase | |
| PA14_28820 | 1 | 52 | -8.347506 | hypothetical protein | |
| PA14_28830 | 1 | 17 | -1.247017 | hypothetical protein | |
| PA14_28840 | 2 | 14 | 0.089439 | helicase | |
| PA14_28850 | 3 | 16 | 2.863679 | hypothetical protein | |
| PA14_28870 | 3 | 17 | 3.444013 | hypothetical protein | |
| PA14_28880 | 3 | 18 | 3.550139 | hypothetical protein | |
| PA14_28895 | 2 | 15 | 3.384643 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_28720 | DNABINDINGHU | 113 | 1e-36 | Prokaryotic integration host factor signature. | |
>DNABINDINGHU#Prokaryotic integration host factor signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_28770 | FbpA_PF05833 | 32 | 0.006 | Fibronectin-binding protein | |
>FbpA_PF05833#Fibronectin-binding protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_28880 | RTXTOXIND | 35 | 5e-04 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| 31 | PA14_30620 | PA14_30710 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_30620 | -2 | 17 | -3.380120 | AraC family transcriptional regulator | |
| PA14_30630 | -1 | 25 | -3.927934 | FAD-dependent monooxygenase | |
| PA14_30650 | 0 | 26 | -4.330501 | response regulator GacA | |
| PA14_30660 | 0 | 28 | -4.703739 | excinuclease ABC subunit C | |
| PA14_30670 | 1 | 31 | -5.443398 | CDP-diacylglycerol--glycerol-3-phosphate | |
| PA14_30690 | 1 | 30 | -5.388450 | *hypothetical protein | |
| PA14_30700 | 1 | 25 | -3.508370 | sensor/response regulator hybrid | |
| PA14_30710 | -1 | 17 | -3.129610 | osmoprotectant transporter activator protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_30650 | HTHFIS | 73 | 4e-17 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_30700 | HTHFIS | 65 | 5e-13 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 32 | PA14_30850 | PA14_31290 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_30850 | 3 | 19 | 0.707435 | TrbI-like protein | |
| PA14_30860 | 3 | 20 | 0.404651 | TrbG-like protein | |
| PA14_30870 | 4 | 22 | 0.092618 | conjugal transfer protein TrbF | |
| PA14_30880 | 5 | 21 | 0.591667 | conjugal transfer protein TrbL | |
| PA14_30890 | 5 | 22 | 0.623064 | hypothetical protein | |
| PA14_30900 | 4 | 21 | 0.169315 | conjugal transfer protein TrbJ | |
| PA14_30910 | 3 | 23 | -0.889483 | conjugal transfer ATPase TrbE | |
| PA14_30930 | 3 | 27 | -1.686113 | TrbC-like protein | |
| PA14_30940 | 2 | 26 | -1.686904 | conjugal transfer protein | |
| PA14_30950 | 2 | 27 | -3.340833 | hypothetical protein | |
| PA14_30960 | 2 | 30 | -4.607095 | conjugal transfer coupling protein TraG | |
| PA14_30970 | 2 | 33 | -5.772886 | transcriptional regulator | |
| PA14_30980 | 3 | 34 | -5.133335 | hypothetical protein | |
| PA14_30990 | 3 | 37 | -5.459403 | hypothetical protein | |
| PA14_31000 | 3 | 40 | -6.006669 | hypothetical protein | |
| PA14_31010 | 3 | 34 | -3.640160 | cation efflux system protein | |
| PA14_31030 | 4 | 33 | -1.831125 | cation efflux system protein | |
| PA14_31040 | 6 | 34 | -0.490722 | cation efflux system protein | |
| PA14_31050 | 6 | 29 | 0.598298 | hypothetical protein | |
| PA14_31060 | 5 | 25 | 1.796745 | hypothetical protein | |
| PA14_31070 | 4 | 22 | 3.068575 | hypothetical protein | |
| PA14_31080 | 5 | 27 | 2.659995 | conjugal transfer protein | |
| PA14_31090 | 4 | 30 | 1.960470 | hypothetical protein | |
| PA14_31100 | 4 | 27 | 1.510598 | plasmid partitioning protein | |
| PA14_31110 | 4 | 31 | 0.873500 | replication initiator and transcriptional | |
| PA14_31130 | 7 | 22 | 1.335684 | hypothetical protein | |
| PA14_31150 | 7 | 21 | 0.501143 | hypothetical protein | |
| PA14_31160 | 7 | 21 | 0.112729 | hypothetical protein | |
| PA14_31170 | 7 | 20 | 0.138562 | hypothetical protein | |
| PA14_31180 | 4 | 24 | -1.044706 | hypothetical protein | |
| PA14_31190 | 4 | 22 | -1.235746 | hypothetical protein | |
| PA14_31200 | 2 | 28 | -2.802717 | hypothetical protein | |
| PA14_31220 | 1 | 32 | -2.906859 | hypothetical protein | |
| PA14_31230 | 1 | 28 | -2.816729 | hypothetical protein | |
| PA14_31240 | 1 | 30 | -3.747576 | nrbE-like protein | |
| PA14_31250 | 1 | 27 | -3.467899 | hypothetical protein | |
| PA14_31260 | 1 | 27 | -3.631005 | RadC-like protein | |
| PA14_31270 | 0 | 19 | -2.738094 | hypothetical protein | |
| PA14_31280 | 0 | 22 | -3.193803 | integrase | |
| PA14_31290 | 1 | 22 | -3.117599 | PA-I galactophilic lectin |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_30860 | PF03544 | 33 | 0.002 | Gram-negative bacterial tonB protein | |
>PF03544#Gram-negative bacterial tonB protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_30870 | PF04335 | 58 | 2e-12 | VirB8 type IV secretion protein | |
>PF04335#VirB8 type IV secretion protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_31010 | ACRIFLAVINRP | 758 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_31030 | RTXTOXIND | 39 | 2e-05 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_31240 | TCRTETA | 58 | 2e-11 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| 33 | PA14_31870 | PA14_32130 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_31870 | 2 | 15 | 1.456775 | RND efflux membrane fusion protein | |
| PA14_31890 | 3 | 16 | 1.292954 | RND efflux transporter | |
| PA14_31900 | 1 | 14 | 1.996862 | efflux transporter | |
| PA14_31920 | 1 | 13 | 2.931991 | outer membrane protein | |
| PA14_31930 | 1 | 13 | 2.804428 | hypothetical protein | |
| PA14_31950 | 1 | 14 | 2.274954 | two-component sensor | |
| PA14_31960 | 1 | 15 | 1.753472 | two-component response regulator | |
| PA14_31970 | 2 | 16 | 2.395775 | CzcC family cobalt/zinc/cadmium efflux | |
| PA14_31990 | 1 | 15 | 2.096422 | cobalt/zinc/cadmium efflux RND transporter, | |
| PA14_32060 | 3 | 15 | 1.992163 | transcriptional regulator XylS | |
| PA14_32080 | 4 | 15 | 1.709301 | toluate 1,2-dioxygenase subunit alpha | |
| PA14_32100 | 3 | 16 | 1.621770 | toluate 1,2-dioxygenase subunit beta | |
| PA14_32110 | 2 | 15 | 2.085630 | toluate 1,2-dioxygenase electron transfer | |
| PA14_32130 | 2 | 14 | 2.199149 | 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_31870 | RTXTOXIND | 44 | 8e-07 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_31890 | ACRIFLAVINRP | 840 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_31900 | ACRIFLAVINRP | 816 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_31920 | RTXTOXIND | 38 | 6e-05 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_31950 | PF06580 | 36 | 3e-04 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_31960 | HTHFIS | 81 | 7e-20 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_31990 | RTXTOXIND | 46 | 2e-07 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_32080 | 60KDINNERMP | 30 | 0.017 | 60kDa inner membrane protein signature. | |
>60KDINNERMP#60kDa inner membrane protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_32130 | DHBDHDRGNASE | 101 | 5e-28 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| 34 | PA14_32450 | PA14_33160 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_32450 | 2 | 13 | 2.632642 | AraC family transcriptional regulator | |
| PA14_32460 | 2 | 12 | 1.599226 | transcriptional regulator | |
| PA14_32470 | 1 | 14 | 0.741409 | hypothetical protein | |
| PA14_32480 | 0 | 14 | 0.684788 | hypothetical protein | |
| PA14_32490 | 1 | 9 | 2.102789 | hypothetical protein | |
| PA14_32500 | 0 | 9 | 2.733606 | TetR family transcriptional regulator | |
| PA14_32520 | 1 | 11 | 3.296170 | hypothetical protein | |
| PA14_32530 | 3 | 9 | 3.667985 | cytochrome c | |
| PA14_32540 | 2 | 10 | 3.435113 | hypothetical protein | |
| PA14_32570 | 2 | 10 | 3.781913 | two-component sensor | |
| PA14_32580 | 0 | 9 | 2.966530 | two-component response regulator | |
| PA14_32590 | 1 | 9 | 2.873370 | thiol:disulfide interchange protein | |
| PA14_32600 | 0 | 7 | 2.825875 | thiol:disulfide interchange protein | |
| PA14_32610 | 0 | 10 | 2.830225 | disulfide isomerase/thiol-disulfide oxidase | |
| PA14_32630 | -1 | 11 | 3.130707 | cytochrome P450 | |
| PA14_32640 | -1 | 13 | 3.259918 | hypothetical protein | |
| PA14_32650 | 0 | 13 | 3.545330 | glutathione S-transferase | |
| PA14_32660 | 0 | 13 | 4.033863 | MFS family transporter | |
| PA14_32670 | 1 | 13 | 2.245493 | hypothetical protein | |
| PA14_32690 | 1 | 12 | 2.058861 | gentisate 1,2-dioxygenase | |
| PA14_32700 | 1 | 12 | 1.866922 | transcriptional regulator | |
| PA14_32710 | 1 | 13 | 1.681715 | ECF subfamily RNA polymerase sigma-70 factor | |
| PA14_32720 | 1 | 13 | -0.835859 | transmembrane sensor | |
| PA14_32740 | 1 | 14 | -1.257859 | TonB-dependent receptor | |
| PA14_32750 | 1 | 19 | -1.779421 | hypothetical protein | |
| PA14_32770 | 2 | 20 | -1.955687 | hypothetical protein | |
| PA14_32780 | 2 | 20 | -2.210451 | hypothetical protein | |
| PA14_32790 | 2 | 22 | -2.646394 | hypothetical protein | |
| PA14_32810 | 6 | 26 | -4.283558 | hypothetical protein | |
| PA14_32820 | 4 | 25 | -3.138695 | hypothetical protein | |
| PA14_32830 | 5 | 22 | -2.044053 | hypothetical protein | |
| PA14_32840 | 3 | 15 | -0.252626 | hypothetical protein | |
| PA14_32850 | 3 | 13 | 1.405263 | hypothetical protein | |
| PA14_32860 | 1 | 12 | 2.652085 | hypothetical protein | |
| PA14_32880 | -1 | 10 | 3.016492 | hypothetical protein | |
| PA14_32890 | 0 | 10 | 3.112481 | hypothetical protein | |
| PA14_32905 | 0 | 11 | 3.204896 | hypothetical protein | |
| PA14_32930 | -2 | 14 | 2.609628 | hypothetical protein | |
| PA14_32940 | -2 | 14 | 2.085751 | transcriptional regulator | |
| PA14_32950 | -2 | 13 | 1.977380 | hypothetical protein | |
| PA14_32970 | -2 | 13 | 2.013235 | transcriptional regulator | |
| PA14_32985 | -2 | 13 | 1.951021 | glycine cleavage system protein H | |
| PA14_33000 | -2 | 11 | 2.375851 | glycine dehydrogenase | |
| PA14_33010 | -1 | 7 | 3.678998 | serine hydroxymethyltransferase | |
| PA14_33030 | 0 | 8 | 4.474350 | L-serine dehydratase | |
| PA14_33040 | 1 | 8 | 5.269719 | glycine cleavage system protein T2 | |
| PA14_33050 | 2 | 8 | 5.142546 | hypothetical protein | |
| PA14_33060 | 2 | 10 | 5.506536 | hypothetical protein | |
| PA14_33070 | 3 | 12 | 5.471423 | hypothetical protein | |
| PA14_33080 | 3 | 13 | 4.660450 | hypothetical protein | |
| PA14_33110 | 3 | 12 | 3.791279 | hypothetical protein | |
| PA14_33120 | 4 | 14 | 3.113898 | hypothetical protein | |
| PA14_33130 | 4 | 14 | 3.287197 | cation-transporting P-type ATPase | |
| PA14_33150 | 2 | 14 | 2.305468 | hypothetical protein | |
| PA14_33160 | 2 | 13 | 1.717919 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_32500 | HTHTETR | 51 | 4e-10 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_32580 | HTHFIS | 83 | 2e-20 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_32660 | TCRTETB | 49 | 3e-08 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_32700 | MPTASEINHBTR | 28 | 0.030 | Metalloprotease inhibitor signature. | |
>MPTASEINHBTR#Metalloprotease inhibitor signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_32740 | TYPE3OMGPROT | 34 | 0.002 | Type III secretion system outer membrane G protein ... | |
>TYPE3OMGPROT#Type III secretion system outer membrane G protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_32780 | PF00577 | 30 | 0.028 | Outer membrane usher protein FimD | |
>PF00577#Outer membrane usher protein FimD | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_32790 | PF05860 | 82 | 4e-20 | haemagglutination activity domain. | |
>PF05860#haemagglutination activity domain. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_32860 | SACTRNSFRASE | 28 | 0.021 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_32940 | HTHFIS | 331 | e-110 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_32950 | UREASE | 34 | 0.002 | Urea amidohydrolase (urease) protein signature. | |
>UREASE#Urea amidohydrolase (urease) protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_33070 | PYOCINKILLER | 30 | 0.046 | Pyocin S killer protein signature. | |
>PYOCINKILLER#Pyocin S killer protein signature. | |||||
| 35 | PA14_33310 | PA14_33360 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_33310 | 1 | 25 | -3.649868 | hypothetical protein | |
| PA14_33320 | 1 | 28 | -3.860183 | hypothetical protein | |
| PA14_33330 | 2 | 24 | -3.273997 | hypothetical protein | |
| PA14_33340 | 3 | 20 | -2.275398 | helicase | |
| PA14_33350 | 5 | 22 | -3.109268 | hypothetical protein | |
| PA14_33360 | 4 | 20 | -2.863499 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_33350 | FLGHOOKAP1 | 29 | 0.036 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
| 36 | PA14_34050 | PA14_34130 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_34050 | 2 | 11 | 2.124082 | hypothetical protein | |
| PA14_34070 | 4 | 11 | 2.984829 | hypothetical protein | |
| PA14_34080 | 4 | 12 | 3.107542 | hypothetical protein | |
| PA14_34100 | 5 | 12 | 3.295228 | hypothetical protein | |
| PA14_34110 | 4 | 12 | 2.846038 | hypothetical protein | |
| PA14_34130 | 2 | 11 | 2.759719 | hypothetical protein |
| 37 | PA14_34270 | PA14_35000 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_34270 | 0 | 13 | 3.326984 | ABC transporter ATP-binding protein | |
| PA14_34280 | 1 | 13 | 3.464136 | hypothetical protein | |
| PA14_34290 | 0 | 12 | 4.507379 | DszA family monooxygenase | |
| PA14_34300 | 0 | 12 | 4.689540 | DszC family monooxygenase | |
| PA14_34320 | -2 | 13 | 4.185598 | DszC family monooxygenase | |
| PA14_34330 | -2 | 13 | 3.648233 | hypothetical protein | |
| PA14_34340 | 0 | 12 | 3.145432 | fructokinase | |
| PA14_34350 | -1 | 13 | 2.436894 | xylulose kinase | |
| PA14_34360 | -1 | 15 | 0.797123 | mannitol dehydrogenase | |
| PA14_34370 | 0 | 15 | 0.563632 | ABC maltose/mannitol transporter ATP-binding | |
| PA14_34390 | -1 | 14 | 0.352767 | binding-protein-dependent maltose/mannitol | |
| PA14_34410 | -1 | 12 | 1.805421 | binding-protein-dependent maltose/mannitol | |
| PA14_34420 | 0 | 10 | 2.610140 | maltose/mannitol ABC transporter | |
| PA14_34440 | 0 | 8 | 2.905461 | transcriptional regulator MtlR | |
| PA14_34450 | 0 | 10 | 3.850803 | AraC family transcriptional regulator | |
| PA14_34460 | -2 | 11 | 3.102963 | hypothetical protein | |
| PA14_34490 | -2 | 11 | 3.292493 | hypothetical protein | |
| PA14_34500 | 0 | 12 | 2.863056 | ABC transporter ATP-binding protein | |
| PA14_34510 | -1 | 12 | 2.134995 | hypothetical protein | |
| PA14_34520 | 0 | 13 | 2.060679 | ABC transporter permease | |
| PA14_34540 | 2 | 14 | 1.483040 | xenobiotic compound DszA family monooxygenase | |
| PA14_34550 | 1 | 15 | 2.075985 | hypothetical protein | |
| PA14_34580 | 0 | 13 | 1.953875 | hypothetical protein | |
| PA14_34600 | -1 | 12 | 1.373390 | glyceraldehyde-3-phosphate dehydrogenase | |
| PA14_34610 | 1 | 15 | 1.168069 | hypothetical protein | |
| PA14_34630 | 1 | 15 | 1.467096 | gluconate permease | |
| PA14_34640 | -2 | 12 | 2.640170 | gluconokinase | |
| PA14_34660 | -2 | 10 | 3.235166 | transcriptional regulator GntR | |
| PA14_34670 | 2 | 9 | 1.906268 | cupin superfamily protein | |
| PA14_34680 | 3 | 10 | 1.978476 | oxidoreductase | |
| PA14_34690 | 5 | 11 | 2.727234 | LysR family transcriptional regulator | |
| PA14_34700 | 5 | 11 | 2.319390 | beta lactamase | |
| PA14_34710 | 5 | 12 | 1.425725 | major facilitator transporter | |
| PA14_34720 | 3 | 11 | 0.235519 | hypothetical protein | |
| PA14_34730 | -2 | 12 | 1.739132 | XRE family transcriptional regulator | |
| PA14_34740 | -2 | 15 | 1.336838 | hypothetical protein | |
| PA14_34750 | -1 | 13 | 3.774891 | taurine catabolism dioxygenase | |
| PA14_34770 | -1 | 13 | 3.981146 | ABC transporter substrate-binding protein | |
| PA14_34780 | -1 | 12 | 4.190191 | ABC transporter ATP-binding protein | |
| PA14_34790 | -1 | 12 | 4.841383 | ABC transporter permease | |
| PA14_34800 | -1 | 12 | 4.994425 | amino acid transporter LysE | |
| PA14_34810 | -1 | 11 | 4.855581 | non-ribosomal peptide synthetase | |
| PA14_34820 | -1 | 12 | 3.967459 | regulatory protein | |
| PA14_34830 | -2 | 11 | 3.505378 | regulatory protein | |
| PA14_34840 | -2 | 11 | 3.416023 | non-ribosomal peptide synthetase | |
| PA14_34850 | -2 | 11 | 1.876906 | tRNA synthase | |
| PA14_34870 | -1 | 11 | 1.776520 | chitinase | |
| PA14_34880 | -3 | 12 | 1.230106 | GntR family transcriptional regulator | |
| PA14_34900 | 1 | 14 | 1.836072 | oxidoreductase | |
| PA14_34920 | 1 | 13 | 2.021947 | ferredoxin | |
| PA14_34930 | 1 | 13 | 2.305263 | phycobiliprotein | |
| PA14_34940 | 2 | 13 | 1.621141 | hypothetical protein | |
| PA14_34960 | 1 | 10 | 2.115511 | glucose-sensitive porin | |
| PA14_34970 | 1 | 10 | 2.461007 | glucose dehydrogenase | |
| PA14_34990 | 0 | 10 | 2.565939 | TonB-dependent receptor | |
| PA14_35000 | 1 | 13 | 3.263147 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_34370 | PF05272 | 31 | 0.009 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_34500 | PF05272 | 29 | 0.025 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_34700 | BLACTAMASEA | 29 | 0.037 | Beta-lactamase class A signature. | |
>BLACTAMASEA#Beta-lactamase class A signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_34710 | TCRTETB | 44 | 1e-06 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| 38 | PA14_35540 | PA14_35950 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_35540 | 2 | 7 | 3.308056 | transcriptional regulator BkdR | |
| PA14_35550 | 1 | 8 | 3.197136 | hypothetical protein | |
| PA14_35570 | 1 | 10 | 3.396632 | hypothetical protein | |
| PA14_35590 | 2 | 10 | 3.314317 | FAD-binding dehydrogenase | |
| PA14_35600 | 3 | 10 | 2.221901 | hypothetical protein | |
| PA14_35620 | 2 | 9 | 3.082010 | hypothetical protein | |
| PA14_35630 | -1 | 10 | 1.673246 | hypothetical protein | |
| PA14_35640 | -1 | 7 | -0.598187 | transferase | |
| PA14_35650 | -1 | 9 | -2.159500 | hypothetical protein | |
| PA14_35670 | 0 | 13 | -4.112982 | glycosyl hydrolase | |
| PA14_35680 | 0 | 22 | -5.708262 | hypothetical protein | |
| PA14_35690 | 0 | 35 | -9.694875 | hypothetical protein | |
| PA14_35700 | 0 | 54 | -13.086440 | hypothetical protein | |
| PA14_35710 | 0 | 53 | -12.780320 | hypothetical protein | |
| PA14_35720 | 0 | 55 | -13.535290 | hypothetical protein | |
| PA14_35730 | 0 | 57 | -14.963031 | hypothetical protein | |
| PA14_35740 | 2 | 64 | -16.541825 | transposase | |
| PA14_35750 | 2 | 69 | -18.287308 | tpnA repressor protein | |
| PA14_35760 | 2 | 62 | -17.208206 | hypothetical protein | |
| PA14_35770 | 3 | 57 | -14.942453 | hypothetical protein | |
| PA14_35780 | 2 | 50 | -12.830013 | hypothetical protein | |
| PA14_35790 | 2 | 45 | -10.807631 | homospermidine synthase | |
| PA14_35800 | 2 | 32 | -7.746772 | hypothetical protein | |
| PA14_35810 | 2 | 27 | -5.495193 | hypothetical protein | |
| PA14_35820 | 1 | 24 | -4.320597 | cointegrate resolution protein S | |
| PA14_35830 | 0 | 18 | -3.150465 | cointegrate resolution protein T | |
| PA14_35840 | 0 | 16 | -2.508016 | hypothetical protein | |
| PA14_35850 | 1 | 14 | -1.956204 | hypothetical protein | |
| PA14_35860 | 1 | 13 | -1.423270 | amino acid permease | |
| PA14_35880 | 2 | 12 | -0.609514 | gamma-aminobutyraldehyde dehydrogenase | |
| PA14_35890 | 3 | 12 | -0.000578 | diaminobutyrate--2-oxoglutarate | |
| PA14_35900 | 5 | 13 | 0.353724 | dehydrogenase | |
| PA14_35920 | 6 | 14 | 0.606571 | acetate permease | |
| PA14_35930 | 5 | 14 | 1.292880 | hypothetical protein | |
| PA14_35940 | 3 | 15 | 0.539574 | acyl-CoA synthetase | |
| PA14_35950 | 2 | 17 | -0.510881 | dehydrogenase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_35680 | TCRTETOQM | 29 | 0.035 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_35690 | YERSSTKINASE | 34 | 0.002 | Yersinia serine/threonine protein kinase signature. | |
>YERSSTKINASE#Yersinia serine/threonine protein kinase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_35760 | SACTRNSFRASE | 43 | 1e-07 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_35830 | RTXTOXIND | 36 | 2e-04 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_35950 | DHBDHDRGNASE | 112 | 3e-32 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| 39 | PA14_36470 | PA14_36590 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_36470 | 2 | 15 | 0.059548 | hypothetical protein | |
| PA14_36480 | 1 | 14 | 1.239466 | hypothetical protein | |
| PA14_36490 | 0 | 12 | 1.994830 | hypothetical protein | |
| PA14_36500 | 0 | 13 | 1.326817 | hypothetical protein | |
| PA14_36520 | -2 | 10 | 0.660907 | hypothetical protein | |
| PA14_36530 | -1 | 10 | 1.734682 | hypothetical protein | |
| PA14_36540 | -1 | 10 | 3.357387 | hypothetical protein | |
| PA14_36550 | -1 | 9 | 3.708183 | hypothetical protein | |
| PA14_36560 | -1 | 9 | 3.825992 | hypothetical protein | |
| PA14_36570 | -2 | 10 | 3.468919 | glycogen synthase | |
| PA14_36580 | -2 | 11 | 3.837418 | glycosyl hydrolase | |
| PA14_36590 | -3 | 10 | 3.788454 | 4-alpha-glucanotransferase |
| 40 | PA14_36880 | PA14_37510 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_36880 | 2 | 14 | 2.225444 | ompetence-damaged protein | |
| PA14_36890 | 2 | 12 | 1.528714 | metallothionein | |
| PA14_36900 | 3 | 9 | 2.293670 | hypothetical protein | |
| PA14_36910 | 2 | 10 | 1.923834 | ATP-dependent DNA ligase | |
| PA14_36920 | 2 | 12 | 1.766872 | hypothetical protein | |
| PA14_36930 | 1 | 11 | 2.534442 | hypothetical protein | |
| PA14_36940 | 0 | 10 | 2.565863 | hypothetical protein | |
| PA14_36960 | 1 | 8 | 2.777677 | transporter | |
| PA14_36980 | 0 | 9 | 2.235370 | hypothetical protein | |
| PA14_36990 | 3 | 10 | 2.461910 | EAL domain-containing protein | |
| PA14_37000 | 2 | 9 | 1.796951 | chaperone CupA5 | |
| PA14_37010 | 3 | 9 | 1.497339 | fimbrial subunit CupA4 | |
| PA14_37030 | 2 | 7 | 1.808231 | usher | |
| PA14_37040 | 2 | 8 | 2.499814 | chaperone CupA2 | |
| PA14_37060 | 1 | 8 | 2.637817 | fimbrial subunit CupA1 | |
| PA14_37070 | 0 | 8 | 2.781562 | hypothetical protein | |
| PA14_37080 | -1 | 10 | 3.389708 | hypothetical protein | |
| PA14_37090 | -1 | 10 | 3.490442 | aldehyde dehydrogenase | |
| PA14_37100 | -2 | 11 | 3.467322 | dehydrogenase | |
| PA14_37120 | -1 | 9 | 3.250501 | LysR family transcriptional regulator | |
| PA14_37130 | 0 | 11 | 2.953183 | hypothetical protein | |
| PA14_37140 | 1 | 11 | 3.120277 | LysR family transcriptional regulator | |
| PA14_37150 | 0 | 12 | 2.735235 | hypothetical protein | |
| PA14_37170 | 0 | 12 | 2.409523 | hypothetical protein | |
| PA14_37190 | 1 | 13 | 2.122671 | O6-methylguanine-DNA methyltransferase | |
| PA14_37200 | 0 | 15 | 2.104445 | hypothetical protein | |
| PA14_37210 | -1 | 15 | 2.723564 | hypothetical protein | |
| PA14_37220 | -1 | 15 | 3.401745 | LysR family transcriptional regulator | |
| PA14_37250 | -1 | 16 | 3.744399 | major facilitator transporter | |
| PA14_37260 | -1 | 11 | 3.846013 | porin | |
| PA14_37270 | 2 | 10 | 4.401761 | LamB/YcsF family protein | |
| PA14_37290 | 0 | 8 | 3.993029 | hypothetical protein | |
| PA14_37310 | 2 | 9 | 4.557980 | hypothetical protein | |
| PA14_37320 | 0 | 9 | 3.152946 | hypothetical protein | |
| PA14_37340 | -1 | 8 | 3.372609 | thiamine pyrophosphate protein | |
| PA14_37350 | 0 | 9 | 3.842874 | hypothetical protein | |
| PA14_37360 | -1 | 9 | 4.095200 | short chain dehydrogenase | |
| PA14_37370 | -1 | 8 | 3.640318 | esterase | |
| PA14_37380 | -1 | 9 | 3.334818 | flavin-binding monooxygenase | |
| PA14_37400 | 3 | 11 | 4.207830 | AraC family transcriptional regulator | |
| PA14_37410 | 1 | 12 | 4.411997 | hypothetical protein | |
| PA14_37420 | 1 | 10 | 3.770811 | transmembrane sensor protein | |
| PA14_37430 | 0 | 10 | 3.550860 | RNA polymerase sigma factor | |
| PA14_37440 | 0 | 11 | 3.944809 | MFS transporter | |
| PA14_37460 | 1 | 10 | 3.693502 | permease | |
| PA14_37470 | 1 | 9 | 3.325783 | flavin-dependent oxidoreductase | |
| PA14_37490 | 1 | 10 | 3.502101 | TonB-dependent receptor | |
| PA14_37510 | -1 | 10 | 3.231694 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_36880 | ACRIFLAVINRP | 28 | 0.024 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_36920 | HTHFIS | 35 | 9e-05 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_37030 | PF00577 | 770 | 0.0 | Outer membrane usher protein FimD | |
>PF00577#Outer membrane usher protein FimD | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_37250 | TCRTETB | 41 | 8e-06 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_37360 | DHBDHDRGNASE | 87 | 1e-22 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_37440 | TCRTETA | 55 | 3e-10 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_37460 | TCRTETA | 29 | 0.044 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| 41 | PA14_38110 | PA14_38220 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_38110 | 2 | 20 | -6.148527 | serine/threonine transporter SstT | |
| PA14_38130 | 3 | 29 | -8.314642 | amino acid permease | |
| PA14_38140 | 3 | 29 | -6.161046 | glutamine synthetase | |
| PA14_38160 | 5 | 34 | -5.520666 | hypothetical protein | |
| PA14_38170 | 5 | 32 | -4.981015 | hypothetical protein | |
| PA14_38180 | 4 | 26 | -3.695718 | hypothetical protein | |
| PA14_38190 | 1 | 11 | 0.830937 | hypothetical protein | |
| PA14_38200 | 1 | 9 | 2.565362 | thiamine pyrophosphate protein | |
| PA14_38210 | 1 | 13 | 2.102162 | hypothetical protein | |
| PA14_38220 | 3 | 13 | 0.272091 | hypothetical protein |
| 42 | PA14_39390 | PA14_39480 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_39390 | 3 | 15 | -3.404964 | 30S ribosomal protein S6 modification protein | |
| PA14_39410 | 3 | 23 | -6.749337 | hypothetical protein | |
| PA14_39420 | 3 | 27 | -7.898165 | hypothetical protein | |
| PA14_39440 | 3 | 21 | -5.209951 | hypothetical protein | |
| PA14_39460 | 3 | 25 | -5.653437 | hypothetical protein | |
| PA14_39470 | 3 | 28 | -5.865162 | hypothetical protein | |
| PA14_39480 | -1 | 18 | -3.608509 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_39410 | SACTRNSFRASE | 42 | 7e-07 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_39480 | TCRTETOQM | 38 | 2e-04 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
| 43 | PA14_39790 | PA14_39970 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_39790 | 0 | 11 | 3.231039 | hypothetical protein | |
| PA14_39800 | 0 | 10 | 3.530060 | ECF subfamily RNA polymerase sigma-70 factor | |
| PA14_39810 | 0 | 9 | 3.515710 | transmembrane sensor | |
| PA14_39820 | -1 | 9 | 3.074132 | tonB-dependent receptor protein | |
| PA14_39830 | -1 | 10 | 3.397614 | hypothetical protein | |
| PA14_39850 | -2 | 11 | 3.963974 | MFS transporter | |
| PA14_39860 | -2 | 13 | 3.409665 | hypothetical protein | |
| PA14_39870 | 1 | 16 | 3.887944 | hydrolase | |
| PA14_39880 | 0 | 16 | 3.028075 | pyridoxamine 5'-phosphate oxidase | |
| PA14_39890 | -1 | 14 | 2.111568 | phenazine biosynthesis protein | |
| PA14_39910 | 0 | 11 | 0.079600 | phenazine biosynthesis protein PhzE | |
| PA14_39925 | 0 | 11 | -2.135472 | phenazine biosynthesis protein PhzD | |
| PA14_39945 | 0 | 11 | -2.583484 | phenazine biosynthesis protein PhzC | |
| PA14_39960 | -1 | 13 | -4.411648 | phenazine biosynthesis protein | |
| PA14_39970 | -1 | 12 | -3.854114 | phenazine biosynthesis protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_39850 | TCRTETA | 98 | 1e-24 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_39925 | ISCHRISMTASE | 350 | e-125 | Isochorismatase signature. | |
>ISCHRISMTASE#Isochorismatase signature. | |||||
| 44 | PA14_40210 | PA14_40510 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_40210 | 6 | 14 | 2.349519 | hypothetical protein | |
| PA14_40220 | 5 | 13 | 2.039637 | hypothetical protein | |
| PA14_40230 | 5 | 13 | 2.047721 | secretion protein | |
| PA14_40240 | 5 | 13 | 2.029098 | ABC transporter ATP-binding protein/permease | |
| PA14_40250 | 5 | 14 | 1.896052 | outer membrane protein | |
| PA14_40260 | 6 | 16 | 1.862776 | hypothetical protein | |
| PA14_40270 | -1 | 10 | 0.900776 | cation transporter | |
| PA14_40280 | 0 | 11 | 1.577298 | hypothetical protein | |
| PA14_40290 | 0 | 13 | 1.810675 | LasA protease | |
| PA14_40300 | -3 | 10 | 2.475251 | hypothetical protein | |
| PA14_40310 | -1 | 10 | 2.046699 | acyl carrier protein | |
| PA14_40320 | 0 | 8 | 2.379638 | secretion protein XqhA | |
| PA14_40330 | 4 | 9 | 1.796890 | hypothetical protein | |
| PA14_40340 | 2 | 8 | 1.537083 | hypothetical protein | |
| PA14_40350 | 1 | 8 | 1.611685 | hypothetical protein | |
| PA14_40370 | 0 | 9 | 1.224946 | hypothetical protein | |
| PA14_40380 | -1 | 11 | 1.483485 | TetR family transcriptional regulator | |
| PA14_40390 | -1 | 11 | 1.424895 | molybdate-binding periplasmic protein precursor | |
| PA14_40410 | -1 | 8 | 0.683898 | molybdenum transport protein ModB | |
| PA14_40420 | -1 | 8 | 0.630266 | molybdenum transport protein ModC | |
| PA14_40430 | 2 | 10 | -0.284073 | hypothetical protein | |
| PA14_40440 | 2 | 11 | -0.270006 | LysR family transcriptional regulator | |
| PA14_40450 | 2 | 11 | 0.062779 | streptomycin 3''-phosphotransferase | |
| PA14_40470 | 2 | 10 | -0.186685 | TrkH family potassium uptake protein | |
| PA14_40490 | 3 | 10 | 0.381710 | hypothetical protein | |
| PA14_40510 | 3 | 9 | 0.192334 | cbb3-type cytochrome c oxidase subunit I |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_40230 | RTXTOXIND | 295 | 1e-98 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_40250 | RTXTOXIND | 31 | 0.009 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_40260 | RTXTOXINA | 48 | 4e-07 | Gram-negative bacterial RTX toxin determinant A family... | |
>RTXTOXINA#Gram-negative bacterial RTX toxin determinant A family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_40320 | BCTERIALGSPD | 590 | 0.0 | Bacterial general secretion pathway protein D signa... | |
>BCTERIALGSPD#Bacterial general secretion pathway protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_40380 | HTHTETR | 67 | 9e-16 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| 45 | PA14_41150 | PA14_41300 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_41150 | 1 | 9 | -3.027265 | ABC transporter permease | |
| PA14_41160 | 1 | 10 | -3.899599 | ABC transporter ATP-binding protein | |
| PA14_41170 | 1 | 13 | -4.772400 | NADH-dependent enoyl-ACP reductase | |
| PA14_41190 | 2 | 14 | -5.580812 | peptidyl-prolyl cis-trans isomerase D | |
| PA14_41210 | 1 | 16 | -5.909009 | *DNA-binding protein HU | |
| PA14_41220 | 1 | 14 | -4.999545 | Lon protease | |
| PA14_41230 | 0 | 16 | -3.622776 | ATP-dependent protease ATP-binding subunit ClpX | |
| PA14_41240 | 0 | 18 | -2.711087 | ATP-dependent Clp protease proteolytic subunit | |
| PA14_41250 | 1 | 17 | -2.461462 | trigger factor | |
| PA14_41260 | -2 | 16 | -0.630962 | two-component response regulator | |
| PA14_41270 | -2 | 10 | -0.480817 | two-component sensor | |
| PA14_41280 | -1 | 9 | -1.009081 | beta-lactamase | |
| PA14_41290 | 2 | 11 | -2.296453 | hypothetical protein | |
| PA14_41300 | 2 | 10 | -1.840818 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_41170 | DHBDHDRGNASE | 63 | 9e-14 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_41210 | DNABINDINGHU | 117 | 1e-38 | Prokaryotic integration host factor signature. | |
>DNABINDINGHU#Prokaryotic integration host factor signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_41260 | HTHFIS | 77 | 2e-18 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_41270 | PF06580 | 29 | 0.041 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| 46 | PA14_41563 | PA14_41730 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_41563 | 1 | 21 | -4.153097 | uroporphyrin-III C-methyltransferase | |
| PA14_41570 | 2 | 20 | -5.024706 | major porin and structural outer membrane porin | |
| PA14_41575 | -1 | 22 | -2.866535 | RNA polymerase sigma factor SigX | |
| PA14_41590 | 0 | 13 | -2.032643 | cytoplasmic membrane protein | |
| PA14_41610 | 2 | 12 | -2.754725 | hypothetical protein | |
| PA14_41630 | 3 | 13 | -2.976985 | cytoplasmic membrane-associated protein | |
| PA14_41640 | 2 | 13 | -3.547544 | ribonuclease activity regulator protein RraA | |
| PA14_41650 | 1 | 11 | -3.488204 | esterase | |
| PA14_41670 | 1 | 13 | -3.639723 | phosphoenolpyruvate synthase | |
| PA14_41680 | 0 | 11 | -3.929649 | hypothetical protein | |
| PA14_41690 | 0 | 10 | -3.457755 | hypothetical protein | |
| PA14_41710 | 0 | 9 | -3.427902 | hypothetical protein | |
| PA14_41730 | 1 | 11 | -3.137402 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_41570 | OMPADOMAIN | 163 | 1e-49 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_41670 | PHPHTRNFRASE | 317 | e-101 | Phosphoenolpyruvate-protein phosphotransferase sign... | |
>PHPHTRNFRASE#Phosphoenolpyruvate-protein phosphotransferase | |||||
| 47 | PA14_42250 | PA14_42610 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_42250 | 3 | 17 | 0.226301 | type III secretion system protein | |
| PA14_42260 | 4 | 18 | -0.544065 | PscK type III export protein | |
| PA14_42270 | 3 | 19 | -1.111733 | pscJ type III export protein | |
| PA14_42280 | 3 | 14 | 0.545985 | type III export protein PscI | |
| PA14_42290 | 1 | 14 | 0.760265 | type III export protein PscH | |
| PA14_42300 | 1 | 15 | 1.108389 | type III export protein PscG | |
| PA14_42310 | 0 | 14 | 0.930437 | type III export protein PscF | |
| PA14_42320 | -1 | 14 | -0.271155 | type III export protein PscE | |
| PA14_42340 | -1 | 15 | -0.234791 | type III export protein PscD | |
| PA14_42350 | -2 | 17 | -0.516131 | Type III secretion outer membrane protein PscC | |
| PA14_42360 | 1 | 25 | -1.632369 | type III export apparatus protein | |
| PA14_42380 | 2 | 23 | -1.757826 | hypothetical protein | |
| PA14_42390 | 3 | 23 | -2.179553 | transcriptional regulator ExsA | |
| PA14_42400 | 2 | 19 | -0.470848 | exoenzyme S synthesis protein B | |
| PA14_42410 | 2 | 17 | -1.171166 | hypothetical protein | |
| PA14_42430 | 2 | 16 | -1.303247 | exoenzyme S synthesis protein C | |
| PA14_42440 | 2 | 15 | -0.443785 | translocator outer membrane protein PopD | |
| PA14_42450 | 2 | 13 | -0.953992 | translocator protein PopB | |
| PA14_42460 | 2 | 14 | -0.449348 | regulatory protein PcrH | |
| PA14_42470 | 3 | 14 | 0.108222 | type III secretion protein PcrV | |
| PA14_42480 | 5 | 15 | 1.201084 | regulator in type III secretion | |
| PA14_42490 | 5 | 15 | 0.669741 | transcriptional regulator protein PcrR | |
| PA14_42500 | 5 | 14 | 0.785436 | type III secretory apparatus protein PcrD | |
| PA14_42510 | 4 | 11 | 2.376721 | hypothetical protein | |
| PA14_42520 | 3 | 11 | 2.244659 | hypothetical protein | |
| PA14_42530 | 3 | 17 | 2.699819 | type III secretion protein | |
| PA14_42540 | 2 | 16 | 2.850477 | protein in type III secretion | |
| PA14_42550 | 1 | 15 | 2.410316 | Type III secretion outer membrane protein PopN | |
| PA14_42570 | 0 | 15 | 2.095382 | type III secretion system ATPase | |
| PA14_42580 | 3 | 18 | 1.753984 | translocation protein in type III secretion | |
| PA14_42600 | 3 | 18 | 0.620736 | translocation protein in type III secretion | |
| PA14_42610 | 2 | 13 | -0.908590 | type III secretion system protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_42250 | TYPE4SSCAGX | 30 | 0.008 | Type IV secretion system CagX conjugation protein si... | |
>TYPE4SSCAGX#Type IV secretion system CagX conjugation protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_42270 | FLGMRINGFLIF | 75 | 1e-17 | Flagellar M-ring protein signature. | |
>FLGMRINGFLIF#Flagellar M-ring protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_42290 | PF09025 | 205 | 2e-71 | YopR Core | |
>PF09025#YopR Core | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_42350 | TYPE3OMGPROT | 815 | 0.0 | Type III secretion system outer membrane G protein ... | |
>TYPE3OMGPROT#Type III secretion system outer membrane G protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_42360 | PF05932 | 93 | 2e-27 | Tir chaperone protein (CesT) | |
>PF05932#Tir chaperone protein (CesT) | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_42430 | PF05932 | 47 | 6e-10 | Tir chaperone protein (CesT) | |
>PF05932#Tir chaperone protein (CesT) | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_42440 | PF05844 | 382 | e-136 | YopD protein | |
>PF05844#YopD protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_42450 | BACINVASINB | 29 | 0.044 | Salmonella/Shigella invasin protein B signature. | |
>BACINVASINB#Salmonella/Shigella invasin protein B signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_42460 | SYCDCHAPRONE | 202 | 2e-69 | Gram-negative bacterial type III secretion SycD cha... | |
>SYCDCHAPRONE#Gram-negative bacterial type III secretion SycD | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_42470 | LCRVANTIGEN | 346 | e-122 | Low calcium response V antigen signature. | |
>LCRVANTIGEN#Low calcium response V antigen signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_42550 | PF07201 | 284 | 4e-98 | Hypersensitivity response secretion protein HrpJ | |
>PF07201#Hypersensitivity response secretion protein HrpJ | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_42600 | TONBPROTEIN | 30 | 0.008 | Gram-negative bacterial tonB protein signature. | |
>TONBPROTEIN#Gram-negative bacterial tonB protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_42610 | TYPE3OMOPROT | 84 | 9e-21 | Type III secretion system outer membrane O protein ... | |
>TYPE3OMOPROT#Type III secretion system outer membrane O protein | |||||
| 48 | PA14_43940 | PA14_44030 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_43940 | 2 | 23 | -3.036456 | succinyl-CoA synthetase subunit alpha | |
| PA14_43950 | 2 | 23 | -2.931100 | succinyl-CoA synthetase subunit beta | |
| PA14_43970 | 2 | 23 | -2.959537 | dihydrolipoamide dehydrogenase | |
| PA14_44000 | 2 | 21 | -3.431144 | dihydrolipoamide succinyltransferase | |
| PA14_44010 | 2 | 18 | -4.235769 | 2-oxoglutarate dehydrogenase E1 | |
| PA14_44020 | 1 | 17 | -4.519137 | succinate dehydrogenase iron-sulfur subunit | |
| PA14_44030 | 1 | 17 | -4.034678 | succinate dehydrogenase flavoprotein subunit |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_43970 | ABC2TRNSPORT | 30 | 0.024 | ABC-2 type transport system membrane protein signat... | |
>ABC2TRNSPORT#ABC-2 type transport system membrane protein | |||||
| 49 | PA14_44311 | PA14_44370 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_44311 | 3 | 14 | -1.918484 | hypothetical protein | |
| PA14_44320 | 4 | 17 | -2.523338 | hypothetical protein | |
| PA14_44340 | 5 | 18 | -3.849472 | cbb3-type cytochrome c oxidase subunit I | |
| PA14_44350 | 3 | 19 | -3.679022 | cbb3-type cytochrome c oxidase subunit II | |
| PA14_44360 | 2 | 17 | -3.613060 | cytochrome c oxidase, cbb3-type subunit III | |
| PA14_44370 | 2 | 17 | -3.574305 | cbb3-type cytochrome c oxidase subunit I |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_44311 | NUCEPIMERASE | 46 | 9e-08 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_44320 | PF04183 | 28 | 0.043 | IucA / IucC family | |
>PF04183#IucA / IucC family | |||||
| 50 | PA14_44850 | PA14_44990 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_44850 | 1 | 14 | -3.340764 | allantoicase | |
| PA14_44860 | 1 | 24 | -5.649947 | ureidoglycolate hydrolase | |
| PA14_44880 | 2 | 25 | -5.628970 | hypothetical protein | |
| PA14_44890 | 1 | 23 | -5.192865 | secreted protein Hcp | |
| PA14_44900 | 0 | 25 | -5.074858 | hypothetical protein | |
| PA14_44910 | 2 | 29 | -5.986097 | hypothetical protein | |
| PA14_44920 | 1 | 16 | -3.684928 | hypothetical protein | |
| PA14_44930 | 2 | 9 | 0.242668 | hypothetical protein | |
| PA14_44950 | 2 | 13 | 0.395672 | transporter | |
| PA14_44960 | -1 | 13 | 0.089564 | hypothetical protein | |
| PA14_44970 | 0 | 16 | -0.017502 | molybdenum cofactor biosynthesis protein A | |
| PA14_44980 | 0 | 16 | 0.299193 | TetR family transcriptional regulator | |
| PA14_44990 | 2 | 15 | 0.856459 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_44930 | OMADHESIN | 25 | 0.048 | Yersinia outer membrane adhesin signature. | |
>OMADHESIN#Yersinia outer membrane adhesin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_44980 | HTHTETR | 71 | 3e-17 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| 51 | PA14_45310 | PA14_45380 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_45310 | 2 | 11 | 0.773982 | cytochrome C-type biogenesis protein CcmF | |
| PA14_45330 | 7 | 10 | 0.752516 | cytochrome c-type biogenesis protein CcmE | |
| PA14_45340 | 7 | 10 | 1.153434 | heme exporter protein | |
| PA14_45350 | 5 | 10 | 1.497267 | heme exporter protein CcmC | |
| PA14_45370 | 5 | 9 | 2.521567 | heme exporter protein CcmB | |
| PA14_45380 | 3 | 10 | 2.750787 | cytochrome c biogenesis protein CcmA |
| 52 | PA14_45540 | PA14_45760 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_45540 | 2 | 12 | -0.787906 | flagellar motor protein MotD | |
| PA14_45560 | 1 | 12 | -0.917299 | flagellar motor protein | |
| PA14_45580 | 1 | 11 | -1.216679 | chemotaxis-specific methylesterase | |
| PA14_45590 | 0 | 11 | -0.950707 | two-component sensor | |
| PA14_45610 | 0 | 9 | -1.371848 | chemotaxis protein CheZ | |
| PA14_45620 | 0 | 12 | -0.252626 | two-component response regulator CheY | |
| PA14_45630 | 0 | 15 | 0.403283 | flagellar biosynthesis sigma factor | |
| PA14_45640 | 0 | 15 | 0.683002 | flagellar synthesis regulator FleN | |
| PA14_45660 | 2 | 16 | 0.892028 | flagellar biosynthesis regulator FlhF | |
| PA14_45680 | 3 | 17 | 0.512164 | flagellar biosynthesis protein FlhA | |
| PA14_45700 | 3 | 20 | 0.554693 | hypothetical protein | |
| PA14_45710 | 5 | 19 | 0.476205 | hypothetical protein | |
| PA14_45720 | 7 | 20 | -0.097947 | flagellar biosynthesis protein FlhB | |
| PA14_45740 | 6 | 20 | -0.844980 | flagellar biosynthesis protein FliR | |
| PA14_45760 | 4 | 17 | -1.495760 | flagellar biosynthesis protein FliQ |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_45540 | OMPADOMAIN | 69 | 1e-15 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_45580 | HTHFIS | 59 | 9e-12 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_45590 | PF06580 | 42 | 8e-06 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_45620 | HTHFIS | 90 | 2e-24 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_45700 | cloacin | 33 | 0.003 | Cloacin signature. | |
>cloacin#Cloacin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_45710 | cloacin | 36 | 2e-04 | Cloacin signature. | |
>cloacin#Cloacin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_45720 | TYPE3IMSPROT | 336 | e-116 | Type III secretion system inner membrane S protein ... | |
>TYPE3IMSPROT#Type III secretion system inner membrane S protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_45740 | TYPE3IMRPROT | 135 | 7e-41 | Type III secretion system inner membrane R protein ... | |
>TYPE3IMRPROT#Type III secretion system inner membrane R protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_45760 | TYPE3IMQPROT | 55 | 9e-14 | Type III secretion system inner membrane Q protein ... | |
>TYPE3IMQPROT#Type III secretion system inner membrane Q protein | |||||
| 53 | PA14_46240 | PA14_46570 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_46240 | 2 | 10 | 2.179354 | hypothetical protein | |
| PA14_46250 | 3 | 9 | 2.049801 | hypothetical protein | |
| PA14_46260 | 2 | 9 | 1.800091 | hypothetical protein | |
| PA14_46270 | -1 | 10 | 2.799017 | helicase | |
| PA14_46280 | -1 | 10 | 3.181618 | hypothetical protein | |
| PA14_46290 | 0 | 10 | 3.246894 | TetR family transcriptional regulator | |
| PA14_46300 | 1 | 11 | 3.230915 | hypothetical protein | |
| PA14_46310 | 1 | 11 | 2.990617 | hypothetical protein | |
| PA14_46320 | 0 | 11 | 2.723564 | pyruvate carboxylase | |
| PA14_46330 | 1 | 13 | 1.870972 | transcriptional regulator | |
| PA14_46340 | 2 | 16 | 1.517912 | hypothetical protein | |
| PA14_46360 | 2 | 14 | 1.756680 | two-component response regulator | |
| PA14_46370 | 1 | 15 | 1.295153 | two-component sensor | |
| PA14_46380 | 1 | 13 | 0.964352 | hypothetical protein | |
| PA14_46390 | -2 | 15 | 0.344898 | hypothetical protein | |
| PA14_46400 | -2 | 17 | -3.614419 | transcriptional regulator | |
| PA14_46420 | -1 | 13 | -2.701324 | short chain dehydrogenase | |
| PA14_46430 | -1 | 16 | -3.213153 | hypothetical protein | |
| PA14_46440 | -1 | 13 | -1.601011 | acetyltransferase | |
| PA14_46450 | -1 | 20 | -2.765468 | bifunctional isocitrate dehydrogenase | |
| PA14_46460 | 1 | 31 | -3.823515 | hypothetical protein | |
| PA14_46470 | 1 | 24 | -1.655775 | erythronate-4-phosphate dehydrogenase | |
| PA14_46480 | 1 | 35 | -5.704048 | transcriptional regulator | |
| PA14_46490 | 1 | 37 | -7.031008 | 3-oxoacyl-ACP synthase | |
| PA14_46510 | 1 | 45 | -9.111407 | hypothetical protein | |
| PA14_46520 | 2 | 40 | -9.363472 | hypothetical protein | |
| PA14_46530 | 0 | 36 | -7.484197 | hypothetical protein | |
| PA14_46540 | -2 | 22 | -5.398917 | hypothetical protein | |
| PA14_46550 | -2 | 16 | -3.387793 | ribonuclease | |
| PA14_46560 | -1 | 14 | -2.142898 | outer membrane protein | |
| PA14_46570 | -1 | 19 | -3.271852 | transcriptional regulator |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_46240 | RTXTOXIND | 39 | 6e-05 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_46290 | HTHTETR | 58 | 1e-12 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_46320 | RTXTOXIND | 35 | 0.002 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_46360 | HTHFIS | 57 | 6e-12 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_46370 | HTHFIS | 50 | 2e-08 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_46420 | DHBDHDRGNASE | 110 | 3e-31 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_46440 | SACTRNSFRASE | 37 | 9e-06 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_46520 | BACINVASINB | 29 | 0.027 | Salmonella/Shigella invasin protein B signature. | |
>BACINVASINB#Salmonella/Shigella invasin protein B signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_46570 | HTHTETR | 60 | 2e-13 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| 54 | PA14_47120 | PA14_47230 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_47120 | 2 | 10 | -0.946221 | hypothetical protein | |
| PA14_47130 | 1 | 12 | -1.792055 | hypothetical protein | |
| PA14_47140 | 2 | 13 | -2.400869 | TonB-dependent receptor | |
| PA14_47150 | 2 | 13 | -1.743524 | protoheme IX farnesyltransferase | |
| PA14_47160 | 2 | 12 | -1.745408 | cytochrome o ubiquinol oxidase subunit IV | |
| PA14_47180 | 1 | 12 | -1.456466 | cytochrome o ubiquinol oxidase subunit III | |
| PA14_47190 | 2 | 10 | -0.412603 | cytochrome o ubiquinol oxidase subunit I | |
| PA14_47210 | 2 | 11 | 1.382204 | cytochrome o ubiquinol oxidase subunit II | |
| PA14_47230 | 2 | 11 | 2.352371 | MFS transporter |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_47140 | ENTEROVIROMP | 29 | 0.048 | Enterobacterial virulence outer membrane protein si... | |
>ENTEROVIROMP#Enterobacterial virulence outer membrane protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_47230 | TCRTETB | 108 | 2e-27 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| 55 | PA14_47410 | PA14_47970 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_47410 | 2 | 10 | 0.566435 | hypothetical protein | |
| PA14_47420 | 1 | 10 | 0.630804 | hypothetical protein | |
| PA14_47430 | 0 | 9 | 0.935113 | metal transporter | |
| PA14_47440 | -2 | 10 | 0.941345 | 2-hydroxyacid dehydrogenase | |
| PA14_47450 | -1 | 11 | 0.418233 | hypothetical protein | |
| PA14_47460 | -1 | 11 | 1.018560 | ribonuclease D | |
| PA14_47490 | 1 | 12 | -0.154702 | hypothetical protein | |
| PA14_47500 | 1 | 11 | -0.317858 | 3-mercaptopyruvate sulfurtransferase | |
| PA14_47510 | 2 | 10 | 0.192357 | hydrolase | |
| PA14_47520 | 3 | 12 | 0.186548 | transcriptional regulator | |
| PA14_47530 | 1 | 15 | 0.421997 | hypothetical protein | |
| PA14_47540 | 0 | 12 | 0.259144 | outer membrane protein | |
| PA14_47550 | -1 | 11 | 2.110741 | glutathione peroxidase | |
| PA14_47560 | 0 | 11 | 2.822581 | MFS transporter | |
| PA14_47580 | -2 | 9 | 2.662053 | MarR family transcriptional regulator | |
| PA14_47600 | -1 | 11 | 3.561001 | acyl-CoA dehydrogenase | |
| PA14_47610 | 1 | 13 | 4.960739 | transcriptional regulator | |
| PA14_47640 | 1 | 11 | 5.104517 | major facilitator transporter | |
| PA14_47650 | 2 | 12 | 5.557430 | cobalamin synthase | |
| PA14_47660 | 2 | 11 | 5.778607 | hypothetical protein | |
| PA14_47670 | 3 | 12 | 5.878864 | nicotinate-nucleotide--dimethylbenzimidazole | |
| PA14_47680 | 2 | 10 | 5.396229 | adenosylcobinamide | |
| PA14_47690 | 1 | 10 | 4.860156 | cobyric acid synthase | |
| PA14_47720 | -1 | 9 | 3.723486 | threonine-phosphate decarboxylase | |
| PA14_47730 | 0 | 9 | 3.892102 | cobalamin biosynthesis protein | |
| PA14_47750 | -1 | 8 | 2.956005 | hypothetical protein | |
| PA14_47760 | -2 | 8 | 3.033569 | cobyrinic acid a,c-diamide synthase | |
| PA14_47790 | -2 | 9 | 3.120801 | cob(I)yrinic acid a,c-diamide | |
| PA14_47800 | 0 | 9 | 4.166421 | tonB-dependent receptor | |
| PA14_47810 | 2 | 9 | 5.464134 | hypothetical protein | |
| PA14_47820 | 1 | 11 | 5.517273 | transcriptional regulator | |
| PA14_47840 | 1 | 9 | 5.750690 | hypothetical protein | |
| PA14_47850 | 3 | 9 | 5.675682 | hypothetical protein | |
| PA14_47860 | 3 | 8 | 5.267334 | oxidoreductase | |
| PA14_47870 | 1 | 10 | 3.814571 | hypothetical protein | |
| PA14_47880 | 0 | 11 | 4.027589 | transcriptional regulator | |
| PA14_47890 | 0 | 14 | 3.401648 | hypothetical protein | |
| PA14_47900 | 1 | 15 | 3.367661 | MFS transporter | |
| PA14_47910 | 0 | 15 | 2.515671 | transcriptional regulator | |
| PA14_47920 | 1 | 17 | 2.587274 | ABC transporter substrate-binding protein | |
| PA14_47930 | 2 | 16 | 2.539695 | hypothetical protein | |
| PA14_47940 | 1 | 14 | 2.153983 | ABC transporter permease | |
| PA14_47950 | 1 | 10 | 2.405237 | ABC transporter permease | |
| PA14_47960 | 3 | 10 | 2.636456 | ABC transporter ATP-binding protein | |
| PA14_47970 | 2 | 8 | 2.856656 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_47450 | SSPAMPROTEIN | 27 | 0.007 | Salmonella surface presentation of antigen gene typ... | |
>SSPAMPROTEIN#Salmonella surface presentation of antigen gene type | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_47520 | HTHTETR | 76 | 2e-19 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_47560 | TCRTETB | 45 | 4e-07 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_47610 | HTHTETR | 54 | 2e-11 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_47640 | TCRTETB | 195 | 5e-59 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_47800 | PF00577 | 30 | 0.029 | Outer membrane usher protein FimD | |
>PF00577#Outer membrane usher protein FimD | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_47900 | TCRTETB | 109 | 4e-28 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| 56 | PA14_48170 | PA14_48410 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_48170 | 0 | 9 | 4.309155 | hypothetical protein | |
| PA14_48190 | 2 | 10 | 5.124370 | transcriptional regulator | |
| PA14_48200 | 2 | 10 | 4.664295 | enoyl-CoA hydratase | |
| PA14_48210 | 2 | 10 | 4.710828 | hydrolase | |
| PA14_48230 | 2 | 11 | 4.418402 | hypothetical protein | |
| PA14_48240 | 1 | 10 | 4.201244 | outer membrane component of multidrug efflux | |
| PA14_48280 | 1 | 13 | 3.251934 | multidrug resistance efflux pump | |
| PA14_48300 | 0 | 14 | 2.561226 | MFS transporter | |
| PA14_48310 | 0 | 16 | 2.667237 | transcriptional regulator | |
| PA14_48320 | 0 | 13 | 2.631173 | hypothetical protein | |
| PA14_48330 | 0 | 12 | 3.012769 | hypothetical protein | |
| PA14_48340 | 1 | 13 | 3.395026 | hypothetical protein | |
| PA14_48350 | 0 | 12 | 3.319762 | hypothetical protein | |
| PA14_48380 | 0 | 12 | 3.256146 | hypothetical protein | |
| PA14_48390 | 0 | 9 | 3.041546 | AraC family transcriptional regulator | |
| PA14_48400 | 2 | 10 | 2.329685 | hypothetical protein | |
| PA14_48410 | 2 | 10 | 2.128326 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_48170 | SUBTILISIN | 89 | 2e-21 | Subtilisin serine protease family (S8) signature. | |
>SUBTILISIN#Subtilisin serine protease family (S8) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_48190 | HTHTETR | 60 | 1e-13 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_48280 | RTXTOXIND | 123 | 3e-33 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_48300 | TCRTETB | 109 | 7e-28 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_48310 | HTHFIS | 34 | 6e-04 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_48350 | RTXTOXIND | 65 | 5e-14 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| 57 | PA14_48840 | PA14_49030 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_48840 | -2 | 14 | -4.287977 | hypothetical protein | |
| PA14_48850 | -2 | 19 | -4.620830 | amino acid permease | |
| PA14_48860 | 1 | 26 | -5.849857 | hypothetical protein | |
| PA14_48870 | 2 | 29 | -6.436083 | C32 tRNA thiolase | |
| PA14_48880 | 3 | 36 | -6.088766 | bacteriophage integrase | |
| PA14_48890 | 2 | 29 | -4.730564 | hypothetical protein | |
| PA14_48900 | 3 | 30 | -4.019265 | hypothetical protein | |
| PA14_48910 | 3 | 30 | -4.000497 | hypothetical protein | |
| PA14_48920 | 4 | 25 | -3.881508 | bacteriophage protein | |
| PA14_48930 | 5 | 31 | -3.259308 | coat protein A of bacteriophage Pf1 | |
| PA14_48940 | 5 | 30 | -2.019411 | coat protein B of bacteriophage Pf1) | |
| PA14_48950 | 5 | 33 | -1.937344 | hypothetical protein | |
| PA14_48960 | 5 | 32 | -2.405148 | hypothetical protein | |
| PA14_48970 | 5 | 35 | -3.752626 | helix destabilizing protein of bacteriophage | |
| PA14_48980 | 9 | 69 | -12.976865 | hypothetical protein | |
| PA14_48990 | 7 | 57 | -12.192925 | hypothetical protein | |
| PA14_49000 | 6 | 50 | -11.648930 | hypothetical protein | |
| PA14_49010 | 6 | 43 | -10.230799 | hypothetical protein | |
| PA14_49020 | 5 | 30 | -6.555047 | hypothetical protein | |
| PA14_49030 | 4 | 21 | -5.286316 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_48930 | cloacin | 50 | 2e-08 | Cloacin signature. | |
>cloacin#Cloacin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_49030 | BCTERIALGSPF | 29 | 0.023 | Bacterial general secretion pathway protein F signa... | |
>BCTERIALGSPF#Bacterial general secretion pathway protein F | |||||
| 58 | PA14_49340 | PA14_49570 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_49340 | -1 | 15 | 3.105353 | protein Pcprotein PS | |
| PA14_49350 | -1 | 15 | 2.308901 | hypothetical protein | |
| PA14_49360 | -1 | 12 | 2.217078 | glucosyl transferase | |
| PA14_49380 | 0 | 12 | 2.388066 | succinyl-diaminopimelate desuccinylase | |
| PA14_49390 | 0 | 17 | 0.580707 | rRNA methyltransferase | |
| PA14_49400 | 0 | 18 | -0.825819 | hypothetical protein | |
| PA14_49410 | 0 | 19 | -6.855940 | cold-shock protein | |
| PA14_49420 | 0 | 18 | -6.203755 | two-component sensor | |
| PA14_49440 | 1 | 25 | -8.768823 | two-component response regulator | |
| PA14_49460 | 3 | 34 | -10.122812 | ribonucleotide-diphosphate reductase subunit | |
| PA14_49470 | 5 | 55 | -13.182900 | ribonucleotide-diphosphate reductase subunit | |
| PA14_49480 | 5 | 66 | -13.838724 | hypothetical protein | |
| PA14_49500 | 1 | 33 | -5.244874 | hypothetical protein | |
| PA14_49510 | 1 | 26 | -4.030043 | immunity protein S3I structureal gene | |
| PA14_49520 | -1 | 18 | -1.597309 | pyocin killing protein | |
| PA14_49530 | -3 | 8 | 1.903261 | hypothetical protein | |
| PA14_49540 | -3 | 8 | 2.181905 | hypothetical protein | |
| PA14_49560 | -2 | 10 | 2.985698 | exotoxin A | |
| PA14_49570 | -2 | 11 | 3.138014 | amino acid permease |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_49340 | ENTSNTHTASED | 89 | 2e-23 | Enterobactin synthetase component D signature. | |
>ENTSNTHTASED#Enterobactin synthetase component D signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_49350 | ISCHRISMTASE | 30 | 0.009 | Isochorismatase signature. | |
>ISCHRISMTASE#Isochorismatase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_49360 | PF05704 | 31 | 0.023 | Capsular polysaccharide synthesis protein | |
>PF05704#Capsular polysaccharide synthesis protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_49420 | PF06580 | 42 | 4e-06 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_49440 | HTHFIS | 79 | 3e-19 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_49520 | PYOCINKILLER | 197 | 3e-56 | Pyocin S killer protein signature. | |
>PYOCINKILLER#Pyocin S killer protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_49560 | DPTHRIATOXIN | 32 | 0.011 | Diphtheria toxin signature. | |
>DPTHRIATOXIN#Diphtheria toxin signature. | |||||
| 59 | PA14_50410 | PA14_50470 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_50410 | 2 | 15 | -1.519844 | flagellar basal body P-ring protein | |
| PA14_50420 | 3 | 15 | -2.346429 | flagellar basal body L-ring protein | |
| PA14_50430 | 3 | 15 | -2.815015 | flagellar basal body rod protein FlgG | |
| PA14_50440 | 1 | 13 | -3.032454 | flagellar basal body rod protein FlgF | |
| PA14_50450 | 2 | 13 | -3.005172 | flagellar hook protein FlgE | |
| PA14_50460 | 1 | 15 | -3.342347 | flagellar basal body rod modification protein | |
| PA14_50470 | 0 | 14 | -3.300725 | flagellar basal body rod protein FlgC |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_50410 | FLGPRINGFLGI | 436 | e-155 | Flagellar P-ring protein signature. | |
>FLGPRINGFLGI#Flagellar P-ring protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_50420 | FLGLRINGFLGH | 181 | 2e-59 | Flagellar L-ring protein signature. | |
>FLGLRINGFLGH#Flagellar L-ring protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_50430 | FLGHOOKAP1 | 45 | 2e-07 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_50450 | FLGHOOKAP1 | 45 | 5e-07 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_50470 | FLGHOOKAP1 | 36 | 3e-05 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
| 60 | PA14_50660 | PA14_50730 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_50660 | 2 | 12 | 0.502498 | hypothetical protein | |
| PA14_50670 | 3 | 12 | 0.650366 | hypothetical protein | |
| PA14_50680 | 3 | 15 | 0.319099 | monovalent cation/H+ antiporter subunit G | |
| PA14_50690 | 2 | 13 | 0.545472 | monovalent cation/H+ antiporter subunit F | |
| PA14_50700 | 2 | 12 | 0.445365 | monovalent cation/H+ antiporter subunit E | |
| PA14_50710 | 1 | 12 | 1.779706 | monovalent cation/H+ antiporter subunit D | |
| PA14_50720 | 0 | 11 | 1.273971 | monovalent cation/H+ antiporter subunit C | |
| PA14_50730 | 2 | 12 | 1.599226 | monovalent cation/H+ antiporter subunit A |
| 61 | PA14_51390 | PA14_52120 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_51390 | 1 | 22 | -3.528695 | 3-oxoacyl-ACP synthase | |
| PA14_51410 | 1 | 28 | -5.010568 | PqsC | |
| PA14_51420 | 2 | 33 | -5.842597 | PqsB | |
| PA14_51430 | 4 | 37 | -6.897092 | coenzyme A ligase | |
| PA14_51440 | 5 | 42 | -8.265982 | methylated-DNA--protein-cysteine | |
| PA14_51450 | 4 | 38 | -8.171595 | usher CupC3 | |
| PA14_51460 | 3 | 44 | -8.729248 | chaperone CupC | |
| PA14_51470 | 2 | 42 | -7.814815 | fimbrial subunit CupC1 | |
| PA14_51480 | 0 | 43 | -7.605238 | hypothetical protein | |
| PA14_51490 | -1 | 40 | -7.043944 | hypothetical protein | |
| PA14_51500 | -1 | 41 | -7.584005 | hypothetical protein | |
| PA14_51510 | 0 | 48 | -8.266215 | hypothetical protein | |
| PA14_51520 | 0 | 49 | -8.492560 | SpcU | |
| PA14_51530 | 1 | 47 | -8.303842 | ExoU | |
| PA14_51540 | 2 | 52 | -9.686589 | transposase | |
| PA14_51550 | 4 | 69 | -12.838360 | transposase | |
| PA14_51560 | 3 | 85 | -16.633579 | acetyltransferase | |
| PA14_51570 | 4 | 80 | -15.872841 | hypothetical protein | |
| PA14_51580 | 3 | 66 | -12.742959 | hypothetical protein | |
| PA14_51590 | 3 | 61 | -12.680163 | hypothetical protein | |
| PA14_51600 | 1 | 49 | -10.244568 | hypothetical protein | |
| PA14_51610 | -1 | 36 | -7.194863 | hypothetical protein | |
| PA14_51620 | -1 | 30 | -5.971581 | transposase | |
| PA14_51630 | 0 | 26 | -5.273460 | transposase | |
| PA14_51640 | 0 | 26 | -5.251506 | hypothetical protein | |
| PA14_51650 | 0 | 21 | -4.581872 | integrase | |
| PA14_51670 | 1 | 20 | -4.256514 | *hypothetical protein | |
| PA14_51680 | 2 | 20 | -4.773091 | radical activating enzyme | |
| PA14_51690 | 1 | 20 | -4.367340 | hypothetical protein | |
| PA14_51710 | 1 | 20 | -4.830885 | peptidoglycan associated lipoprotein OprL | |
| PA14_51720 | 1 | 19 | -4.685037 | translocation protein TolB | |
| PA14_51730 | 1 | 23 | -5.004548 | TolA protein | |
| PA14_51740 | 1 | 22 | -4.280183 | TolR protein | |
| PA14_51750 | 2 | 20 | -3.880077 | TolQ protein | |
| PA14_51770 | 2 | 15 | -3.430921 | hypothetical protein | |
| PA14_51780 | 2 | 12 | -3.300466 | Holliday junction DNA helicase RuvB | |
| PA14_51790 | 1 | 13 | -3.016339 | Holliday junction DNA helicase RuvA | |
| PA14_51800 | 1 | 11 | -2.807875 | Holliday junction resolvase | |
| PA14_51810 | 0 | 11 | -3.017293 | hypothetical protein | |
| PA14_51820 | -1 | 12 | -3.570068 | aspartyl-tRNA synthetase | |
| PA14_51830 | -1 | 18 | -4.235169 | DNA-binding stress protein | |
| PA14_51840 | -1 | 14 | -3.917868 | cold-shock protein | |
| PA14_51850 | -1 | 13 | -3.888644 | hypothetical protein | |
| PA14_51860 | 0 | 13 | -3.542718 | hypothetical protein | |
| PA14_51880 | 0 | 14 | -3.628645 | basic amino acid, basic peptide and imipenem | |
| PA14_51890 | 0 | 16 | -3.010591 | hypothetical protein | |
| PA14_51900 | -1 | 15 | -3.057535 | prolyl-tRNA synthetase | |
| PA14_51910 | -1 | 26 | -3.440785 | hypothetical protein | |
| PA14_51920 | 1 | 30 | -3.689052 | acylphosphatase | |
| PA14_51930 | 0 | 25 | -3.347643 | thioredoxin | |
| PA14_51940 | 1 | 20 | -2.889161 | hypothetical protein | |
| PA14_51950 | 1 | 20 | -3.275153 | hypothetical protein | |
| PA14_51960 | 1 | 20 | -2.160672 | ribonuclease | |
| PA14_51980 | -1 | 16 | -1.210481 | arsenate reductase | |
| PA14_51990 | -1 | 15 | -1.210097 | Trp repressor binding protein WrbA | |
| PA14_52000 | -2 | 14 | -2.269542 | hypothetical protein | |
| PA14_52010 | -2 | 15 | -2.567441 | DNA replication initiation factor | |
| PA14_52020 | -1 | 16 | -2.401657 | hypothetical protein | |
| PA14_52040 | -2 | 16 | -3.597395 | phosphoribosylaminoimidazole synthetase | |
| PA14_52050 | -1 | 23 | -4.668117 | phosphoribosylglycinamide formyltransferase | |
| PA14_52060 | 0 | 24 | -5.808182 | hypothetical protein | |
| PA14_52070 | 1 | 30 | -5.014531 | transcriptional regulator | |
| PA14_52080 | 2 | 25 | -5.674941 | hypothetical protein | |
| PA14_52090 | 3 | 20 | -5.138165 | hypothetical protein | |
| PA14_52110 | 4 | 19 | -4.653781 | hypothetical protein | |
| PA14_52120 | 1 | 15 | -3.874026 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_51390 | PF04183 | 30 | 0.015 | IucA / IucC family | |
>PF04183#IucA / IucC family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_51450 | PF00577 | 793 | 0.0 | Outer membrane usher protein FimD | |
>PF00577#Outer membrane usher protein FimD | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_51560 | SACTRNSFRASE | 32 | 5e-04 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_51680 | TYPE3OMBPROT | 29 | 0.023 | Type III secretion system outer membrane B protein ... | |
>TYPE3OMBPROT#Type III secretion system outer membrane B protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_51690 | RTXTOXIND | 32 | 0.002 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_51710 | OMPADOMAIN | 116 | 6e-34 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_51730 | IGASERPTASE | 49 | 2e-08 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_51750 | 60KDINNERMP | 29 | 0.017 | 60kDa inner membrane protein signature. | |
>60KDINNERMP#60kDa inner membrane protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_51820 | ANTHRAXTOXNA | 32 | 0.009 | Anthrax toxin LF subunit signature. | |
>ANTHRAXTOXNA#Anthrax toxin LF subunit signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_51830 | HELNAPAPROT | 157 | 3e-52 | Helicobacter neutrophil-activating protein A family ... | |
>HELNAPAPROT#Helicobacter neutrophil-activating protein A family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_51900 | ANTHRAXTOXNA | 30 | 0.027 | Anthrax toxin LF subunit signature. | |
>ANTHRAXTOXNA#Anthrax toxin LF subunit signature. | |||||
| 62 | PA14_53540 | PA14_53830 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_53540 | 4 | 34 | -8.842892 | hydrolase | |
| PA14_53550 | 6 | 49 | -12.690437 | transcriptional regulator | |
| PA14_53560 | 7 | 62 | -16.287182 | hypothetical protein | |
| PA14_53570 | 5 | 71 | -19.027593 | integrase | |
| PA14_53580 | 6 | 72 | -19.932823 | hypothetical protein | |
| PA14_53590 | 7 | 71 | -18.539489 | hypothetical protein | |
| PA14_53600 | 6 | 59 | -14.954781 | hypothetical protein | |
| PA14_53610 | 4 | 50 | -11.501251 | hypothetical protein | |
| PA14_53620 | 3 | 45 | -9.594286 | hypothetical protein | |
| PA14_53630 | 2 | 44 | -8.076943 | hypothetical protein | |
| PA14_53640 | 2 | 43 | -7.393367 | hypothetical protein | |
| PA14_53650 | 2 | 38 | -7.717587 | hypothetical protein | |
| PA14_53660 | 1 | 27 | -4.150476 | hypothetical protein | |
| PA14_53670 | 1 | 17 | -0.782612 | hypothetical protein | |
| PA14_53680 | 1 | 15 | 3.270916 | hypothetical protein | |
| PA14_53690 | 1 | 14 | 4.059148 | hypothetical protein | |
| PA14_53700 | 1 | 13 | 3.484979 | ring-cleaving dioxygenase | |
| PA14_53720 | 1 | 13 | 3.819250 | transcriptional regulator | |
| PA14_53730 | 2 | 11 | 3.588951 | transcriptional regulator | |
| PA14_53740 | 3 | 12 | 3.813976 | hypothetical protein | |
| PA14_53750 | 2 | 10 | 3.056841 | hypothetical protein | |
| PA14_53770 | 0 | 11 | 2.141861 | hypothetical protein | |
| PA14_53780 | 0 | 12 | 2.560829 | MFS family transporter | |
| PA14_53790 | -1 | 9 | 1.188815 | haloacid dehalogenase | |
| PA14_53800 | -2 | 11 | 0.895938 | manganese transport protein MntH | |
| PA14_53810 | -2 | 13 | -0.476340 | hypothetical protein | |
| PA14_53820 | -1 | 11 | 0.150193 | hypothetical protein | |
| PA14_53830 | 2 | 11 | 1.515862 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_53550 | HTHTETR | 52 | 2e-10 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_53580 | IGASERPTASE | 32 | 0.002 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_53780 | TCRTETA | 33 | 0.002 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| 63 | PA14_54690 | PA14_55090 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_54690 | 2 | 10 | 2.332044 | hypothetical protein | |
| PA14_54700 | 2 | 9 | 1.939701 | beta-lactamase | |
| PA14_54710 | 3 | 11 | 1.577817 | transcriptional regulator | |
| PA14_54720 | 2 | 12 | 0.344389 | hypothetical protein | |
| PA14_54730 | 2 | 12 | 0.803479 | hypothetical protein | |
| PA14_54740 | 0 | 13 | 0.782749 | hypothetical protein | |
| PA14_54750 | -1 | 13 | 0.189525 | hypothetical protein | |
| PA14_54760 | 0 | 13 | 0.221409 | hypothetical protein | |
| PA14_54770 | -1 | 14 | -0.409331 | hypothetical protein | |
| PA14_54790 | 0 | 14 | -1.362877 | hypothetical protein | |
| PA14_54800 | 1 | 14 | -2.224591 | pseudouridylate synthase | |
| PA14_54810 | 1 | 19 | -3.800649 | hypothetical protein | |
| PA14_54820 | 0 | 27 | -4.947462 | hypothetical protein | |
| PA14_54830 | 0 | 34 | -6.075364 | transferase | |
| PA14_54850 | 1 | 42 | -6.151552 | *hypothetical protein | |
| PA14_54860 | 1 | 42 | -5.688622 | hypothetical protein | |
| PA14_54870 | -1 | 35 | -5.199309 | hypothetical protein | |
| PA14_54880 | 0 | 34 | -4.392424 | serine acetyltransferase | |
| PA14_54890 | 0 | 33 | -4.466167 | hypothetical protein | |
| PA14_54900 | -1 | 33 | -4.533582 | hypothetical protein | |
| PA14_54910 | -1 | 33 | -4.605137 | thioesterase | |
| PA14_54920 | -1 | 32 | -4.625314 | non-ribosomal peptide synthetase | |
| PA14_54930 | -1 | 36 | -4.612613 | non-ribosomal peptide synthetase | |
| PA14_54940 | -2 | 36 | -5.168141 | siderophore biosynthesis enzyme | |
| PA14_54950 | -1 | 36 | -4.802159 | hypothetical protein | |
| PA14_54960 | 0 | 36 | -3.922351 | hypothetical protein | |
| PA14_54970 | 1 | 35 | -3.639941 | ABC transporter | |
| PA14_54980 | 1 | 34 | -4.015439 | poossible ABC-type transporter protein | |
| PA14_55000 | 0 | 33 | -4.329153 | ABC transporter periplasmic protein | |
| PA14_55020 | 0 | 34 | -4.525711 | ABC transporter permease | |
| PA14_55030 | 0 | 34 | -5.116718 | ABC transporter permease | |
| PA14_55040 | 1 | 36 | -6.048182 | ferric enterobactin transporter ATP-binding | |
| PA14_55050 | 1 | 34 | -6.507394 | TonB-dependent receptor | |
| PA14_55060 | 0 | 39 | -6.884840 | hypothetical protein | |
| PA14_55070 | 1 | 41 | -5.564599 | hypothetical protein | |
| PA14_55080 | 0 | 36 | -4.534469 | hypothetical protein | |
| PA14_55090 | 0 | 31 | -4.136121 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_54690 | NUCEPIMERASE | 35 | 2e-04 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_54930 | ISCHRISMTASE | 41 | 2e-05 | Isochorismatase signature. | |
>ISCHRISMTASE#Isochorismatase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_54970 | PF05272 | 31 | 0.015 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_55000 | FERRIBNDNGPP | 43 | 5e-07 | Ferrichrome-binding periplasmic protein signature. | |
>FERRIBNDNGPP#Ferrichrome-binding periplasmic protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_55040 | PF05272 | 31 | 0.007 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| 64 | PA14_55410 | PA14_55690 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_55410 | 0 | 10 | 3.180041 | hypothetical protein | |
| PA14_55430 | 1 | 10 | 3.920500 | type II secretion system protein | |
| PA14_55440 | 0 | 11 | 3.431961 | type II secretion system protein | |
| PA14_55450 | -1 | 11 | 3.249057 | type II secretion system protein | |
| PA14_55460 | 1 | 17 | 3.611010 | type II secretion system protein | |
| PA14_55470 | 1 | 14 | 3.756808 | type II secretion system protein | |
| PA14_55480 | 2 | 16 | 3.065624 | type II secretion system protein | |
| PA14_55490 | 2 | 14 | 3.222744 | HxcT pseudopilin | |
| PA14_55500 | 0 | 14 | 2.654863 | HxcV pseudopilin | |
| PA14_55510 | 0 | 16 | 2.843184 | hypothetical protein | |
| PA14_55520 | 0 | 16 | 2.305129 | type II secretion system protein | |
| PA14_55530 | 0 | 13 | 1.782795 | type II secretion system protein | |
| PA14_55540 | 0 | 12 | 1.859478 | transmembrane sensor | |
| PA14_55550 | 2 | 12 | 2.109389 | ECF subfamily RNA polymerase sigma-70 factor | |
| PA14_55560 | -1 | 12 | 1.568541 | hypothetical protein | |
| PA14_55570 | -1 | 14 | 0.953696 | hypothetical protein | |
| PA14_55580 | 4 | 13 | 0.830303 | heme oxygenase | |
| PA14_55590 | 3 | 11 | 1.599226 | hypothetical protein | |
| PA14_55600 | 1 | 8 | 1.828253 | hypothetical protein | |
| PA14_55610 | 1 | 7 | 1.956556 | error-prone DNA polymerase | |
| PA14_55640 | 2 | 8 | 2.446104 | **exonuclease SbcD | |
| PA14_55650 | 3 | 9 | 2.659000 | exonuclease | |
| PA14_55660 | 0 | 10 | 3.188343 | exodeoxyribonuclease V subunit alpha | |
| PA14_55670 | 0 | 8 | 3.188651 | exodeoxyribonuclease V subunit beta | |
| PA14_55690 | 2 | 9 | 3.188530 | exodeoxyribonuclease V subunit gamma |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_55430 | BCTERIALGSPF | 379 | e-132 | Bacterial general secretion pathway protein F signa... | |
>BCTERIALGSPF#Bacterial general secretion pathway protein F | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_55450 | BCTERIALGSPD | 346 | e-111 | Bacterial general secretion pathway protein D signa... | |
>BCTERIALGSPD#Bacterial general secretion pathway protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_55490 | BCTERIALGSPG | 167 | 1e-56 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_55500 | BCTERIALGSPG | 31 | 6e-04 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_55520 | BCTERIALGSPH | 50 | 2e-10 | Bacterial general secretion pathway protein H signa... | |
>BCTERIALGSPH#Bacterial general secretion pathway protein H | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_55530 | BCTERIALGSPG | 32 | 6e-04 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_55610 | DHBDHDRGNASE | 30 | 0.046 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_55650 | GPOSANCHOR | 43 | 7e-06 | Gram-positive coccus surface protein anchor signature. | |
>GPOSANCHOR#Gram-positive coccus surface protein anchor signature. | |||||
| 65 | PA14_57450 | PA14_57560 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_57450 | 2 | 13 | -1.285602 | S-adenosyl-methyltransferase MraW | |
| PA14_57460 | 1 | 12 | -1.258835 | cell division protein MraZ | |
| PA14_57470 | 0 | 10 | -0.966449 | hypothetical protein | |
| PA14_57480 | 1 | 14 | -1.709821 | lipoprotein | |
| PA14_57490 | 1 | 17 | -4.240722 | hypothetical protein | |
| PA14_57500 | 1 | 15 | -5.092874 | phosphoheptose isomerase | |
| PA14_57510 | 2 | 16 | -4.878282 | secreted lipoprotein | |
| PA14_57520 | 2 | 20 | -5.317497 | ClpXP protease specificity-enhancing factor | |
| PA14_57530 | 2 | 20 | -5.713038 | stringent starvation protein A | |
| PA14_57540 | 1 | 16 | -4.590680 | cytochrome c1 | |
| PA14_57560 | 0 | 13 | -3.822491 | cytochrome b |
| 66 | PA14_57720 | PA14_57980 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_57720 | 2 | 10 | -1.232089 | sulfate adenylyltransferase subunit 2 | |
| PA14_57730 | 3 | 10 | -0.550245 | murein hydrolase B | |
| PA14_57740 | 4 | 12 | -0.606894 | hypothetical protein | |
| PA14_57760 | 4 | 12 | -0.920347 | AlgW protein | |
| PA14_57770 | 3 | 12 | -1.080784 | histidinol-phosphate aminotransferase | |
| PA14_57780 | 3 | 14 | -1.315494 | histidinol dehydrogenase | |
| PA14_57800 | 0 | 14 | -2.491641 | ATP phosphoribosyltransferase | |
| PA14_57810 | -1 | 13 | -2.876455 | UDP-N-acetylglucosamine | |
| PA14_57820 | 0 | 12 | -3.180348 | hypothetical protein | |
| PA14_57830 | 0 | 11 | -2.566059 | hypothetical protein | |
| PA14_57840 | 2 | 13 | -2.534442 | hypothetical protein | |
| PA14_57850 | 2 | 12 | -2.910672 | hypothetical protein | |
| PA14_57870 | 2 | 13 | -2.900380 | ABC transporter permease | |
| PA14_57880 | 4 | 14 | -3.018379 | ABC transporter ATP-binding protein | |
| PA14_57890 | 1 | 17 | -3.804877 | hypothetical protein | |
| PA14_57900 | 1 | 20 | -4.928885 | hypothetical protein | |
| PA14_57910 | 0 | 19 | -5.405251 | hypothetical protein | |
| PA14_57920 | 0 | 18 | -4.838526 | hypothetical protein | |
| PA14_57930 | 0 | 19 | -4.879564 | ABC transporter ATP-binding protein | |
| PA14_57940 | 0 | 16 | -3.459085 | RNA polymerase factor sigma-54 | |
| PA14_57950 | -2 | 13 | -2.482571 | hypothetical protein | |
| PA14_57960 | -1 | 13 | -1.560361 | nitrogen regulatory IIA protein | |
| PA14_57970 | 1 | 11 | -1.295680 | hypothetical protein | |
| PA14_57980 | 2 | 11 | -0.797046 | phosphoryl carrier protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_57720 | TCRTETOQM | 28 | 0.046 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_57760 | V8PROTEASE | 60 | 2e-12 | V8 serine protease family signature. | |
>V8PROTEASE#V8 serine protease family signature. | |||||
| 67 | PA14_58440 | PA14_58770 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_58440 | 2 | 14 | 1.515507 | ABC transporter permease | |
| PA14_58450 | 1 | 10 | 2.729400 | ABC transporter permease | |
| PA14_58470 | 0 | 9 | 3.136477 | ABC transporter ATP-binding protein | |
| PA14_58490 | -1 | 9 | 3.258515 | dipeptide transporter ATP-binding subunit | |
| PA14_58500 | -1 | 11 | 2.012302 | hypothetical protein | |
| PA14_58510 | 0 | 8 | 1.845609 | AsnC family transcriptional regulator | |
| PA14_58515 | 0 | 9 | 0.044440 | hypothetical protein | |
| PA14_58530 | -1 | 9 | -0.622997 | hypothetical protein | |
| PA14_58540 | 0 | 8 | -0.591482 | hypothetical protein | |
| PA14_58550 | 0 | 8 | -1.428444 | lipopolysaccharide biosynthetic protein LpxO1 | |
| PA14_58560 | 1 | 7 | -1.072202 | oxidoreductase | |
| PA14_58570 | 1 | 10 | -3.021083 | outer membrane ferric siderophore receptor | |
| PA14_58580 | -1 | 8 | -1.844062 | hydroxylase | |
| PA14_58600 | -2 | 8 | -1.370340 | hypothetical protein | |
| PA14_58610 | -1 | 8 | -2.144399 | hypothetical protein | |
| PA14_58620 | -1 | 10 | -1.586510 | hypothetical protein | |
| PA14_58630 | -1 | 8 | -1.383231 | ornithine decarboxylase | |
| PA14_58650 | -2 | 15 | -2.338550 | chemotaxis transducer | |
| PA14_58660 | -2 | 23 | -3.848249 | hypothetical protein | |
| PA14_58670 | -1 | 26 | -5.003173 | N-acetyl-anhydromuranmyl-L-alanine amidase | |
| PA14_58690 | -1 | 25 | -5.975713 | hypothetical protein | |
| PA14_58700 | 2 | 44 | -10.701573 | nicotinate-nucleotide pyrophosphorylase | |
| PA14_58720 | 3 | 44 | -11.047407 | *hypothetical protein | |
| PA14_58730 | 2 | 32 | -8.495270 | type IV pilin structural subunit | |
| PA14_58740 | 1 | 26 | -7.780206 | hypothetical protein | |
| PA14_58750 | 1 | 26 | -7.537675 | type 4 fimbrial biogenesis protein PilB | |
| PA14_58760 | 2 | 25 | -6.131806 | type 4 fimbrial biogenesis protein pilC | |
| PA14_58770 | 2 | 15 | -0.972286 | type 4 prepilin peptidase PilD |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_58540 | PHPHTRNFRASE | 29 | 0.013 | Phosphoenolpyruvate-protein phosphotransferase sign... | |
>PHPHTRNFRASE#Phosphoenolpyruvate-protein phosphotransferase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_58610 | SECYTRNLCASE | 32 | 0.006 | Preprotein translocase SecY subunit signature. | |
>SECYTRNLCASE#Preprotein translocase SecY subunit signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_58730 | BCTERIALGSPG | 43 | 6e-08 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_58760 | BCTERIALGSPF | 433 | e-153 | Bacterial general secretion pathway protein F signa... | |
>BCTERIALGSPF#Bacterial general secretion pathway protein F | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_58770 | PREPILNPTASE | 352 | e-125 | Type IV prepilin cysteine protease (C20) family sig... | |
>PREPILNPTASE#Type IV prepilin cysteine protease (C20) family | |||||
| 68 | PA14_58900 | PA14_60310 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_58900 | -1 | 26 | -3.138993 | large exoprotein | |
| PA14_58910 | 0 | 32 | -5.775639 | chromosome partitioning-like protein | |
| PA14_58920 | 2 | 28 | -5.681698 | hypothetical protein | |
| PA14_58930 | 3 | 27 | -5.235791 | hypothetical protein | |
| PA14_58940 | 1 | 26 | -5.411045 | hypothetical protein | |
| PA14_58950 | 1 | 27 | -5.399160 | hypothetical protein | |
| PA14_58960 | 1 | 26 | -5.958571 | hypothetical protein | |
| PA14_58970 | 1 | 27 | -6.374502 | hypothetical protein | |
| PA14_58980 | 1 | 29 | -5.856773 | hypothetical protein | |
| PA14_58990 | 1 | 21 | -4.815658 | DNA helicase | |
| PA14_59000 | 2 | 20 | -4.343046 | hypothetical protein | |
| PA14_59010 | 1 | 29 | -6.329145 | hypothetical protein | |
| PA14_59020 | 2 | 30 | -6.706385 | hypothetical protein | |
| PA14_59030 | 2 | 33 | -6.975473 | hypothetical protein | |
| PA14_59050 | 1 | 35 | -7.164555 | nucleoid-associated protein NdpA | |
| PA14_59060 | 1 | 46 | -8.851975 | hypothetical protein | |
| PA14_59070 | 1 | 43 | -8.285704 | hypothetical protein | |
| PA14_59090 | 1 | 40 | -7.740362 | hypothetical protein | |
| PA14_59100 | 0 | 39 | -7.271642 | hypothetical protein | |
| PA14_59110 | 1 | 37 | -7.424101 | hypothetical protein | |
| PA14_59120 | 0 | 36 | -7.669089 | hypothetical protein | |
| PA14_59130 | 0 | 29 | -5.808182 | hypothetical protein | |
| PA14_59140 | 2 | 36 | -8.109401 | hypothetical protein | |
| PA14_59150 | 0 | 39 | -7.679125 | single-stranded DNA-binding protein | |
| PA14_59160 | 0 | 34 | -6.468321 | hypothetical protein | |
| PA14_59170 | 2 | 40 | -8.973848 | hypothetical protein | |
| PA14_59180 | 4 | 42 | -9.702224 | topoisomerase I - like protein | |
| PA14_59190 | 5 | 44 | -9.478326 | hypothetical protein | |
| PA14_59200 | 1 | 35 | -7.589036 | hypothetical protein | |
| PA14_59210 | 2 | 31 | -7.048620 | DNA helicase | |
| PA14_59220 | 4 | 34 | -7.480794 | pyocin S5 | |
| PA14_59230 | 0 | 20 | -3.697734 | colicin immunity protein | |
| PA14_59240 | 3 | 17 | -2.476679 | type IV B pilus protein | |
| PA14_59250 | 2 | 18 | -3.122581 | Type IV B pilus protein | |
| PA14_59270 | 2 | 17 | -2.788496 | type IV b pilus protein | |
| PA14_59280 | 1 | 16 | -3.004002 | type IV B pilus protein | |
| PA14_59290 | 1 | 16 | -3.201279 | type IV B pilus protein | |
| PA14_59310 | 1 | 22 | -3.455043 | type IV B pilus protein | |
| PA14_59320 | 0 | 28 | -4.363138 | type IV B pilus protein | |
| PA14_59340 | 0 | 30 | -4.320674 | type IV B pilus protein | |
| PA14_59350 | 2 | 36 | -5.808182 | Type IV B pilus protein | |
| PA14_59360 | 3 | 49 | -7.274231 | type IV B pilus protein | |
| PA14_59370 | 4 | 55 | -9.495621 | hypothetical protein | |
| PA14_59380 | 3 | 51 | -11.621819 | hypothetical protein | |
| PA14_59390 | 3 | 45 | -11.289266 | hypothetical protein | |
| PA14_59400 | 2 | 44 | -10.256277 | hypothetical protein | |
| PA14_59410 | 1 | 42 | -9.707172 | hypothetical protein | |
| PA14_59430 | 2 | 39 | -9.548620 | hypothetical protein | |
| PA14_59440 | 2 | 37 | -8.788741 | hypothetical protein | |
| PA14_59470 | 3 | 31 | -6.002526 | hypothetical protein | |
| PA14_59480 | 3 | 27 | -4.851289 | hypothetical protein | |
| PA14_59490 | 3 | 24 | -4.058855 | hypothetical protein | |
| PA14_59500 | 1 | 34 | -7.517375 | hypothetical protein | |
| PA14_59510 | 1 | 34 | -7.516949 | hypothetical protein | |
| PA14_59520 | 0 | 34 | -7.355917 | hypothetical protein | |
| PA14_59530 | 0 | 34 | -7.906843 | hypothetical protein | |
| PA14_59540 | 0 | 40 | -9.774045 | hypothetical protein | |
| PA14_59550 | 4 | 57 | -12.916272 | hypothetical protein | |
| PA14_59560 | 6 | 52 | -10.866661 | transposase | |
| PA14_59570 | 4 | 56 | -12.009631 | transposase | |
| PA14_59580 | 4 | 65 | -14.494044 | transposase | |
| PA14_59590 | 4 | 70 | -14.916022 | hypothetical protein | |
| PA14_59600 | 4 | 60 | -12.183746 | hypothetical protein | |
| PA14_59610 | 3 | 56 | -11.318293 | hypothetical protein | |
| PA14_59620 | 2 | 49 | -8.982222 | hypothetical protein | |
| PA14_59630 | 1 | 43 | -7.532019 | hypothetical protein | |
| PA14_59640 | 0 | 25 | -2.602288 | hypothetical protein | |
| PA14_59650 | 0 | 23 | -3.009074 | hypothetical protein | |
| PA14_59660 | 1 | 22 | -3.044088 | hypothetical protein | |
| PA14_59670 | 0 | 20 | -2.952646 | hypothetical protein | |
| PA14_59680 | 1 | 19 | -3.278294 | hypothetical protein | |
| PA14_59690 | 1 | 18 | -2.696650 | hypothetical protein | |
| PA14_59700 | 2 | 20 | -3.625518 | hypothetical protein | |
| PA14_59710 | 0 | 24 | -3.658453 | fimbrial protein | |
| PA14_59720 | 0 | 26 | -4.397314 | pili assembly chaperone | |
| PA14_59750 | -1 | 30 | -5.197187 | fimbrial subunit | |
| PA14_59760 | -1 | 31 | -5.394870 | pili assembly chaperone | |
| PA14_59770 | -1 | 30 | -6.145483 | two component response regulator | |
| PA14_59780 | 0 | 35 | -7.542506 | kinase sensor protein | |
| PA14_59790 | 0 | 40 | -9.403732 | two component response regulator | |
| PA14_59800 | 1 | 40 | -9.701327 | kinase sensor protein | |
| PA14_59820 | 3 | 42 | -10.937298 | hypothetical protein | |
| PA14_59830 | 3 | 46 | -11.512469 | helicase | |
| PA14_59840 | 7 | 60 | -12.990057 | hypothetical protein | |
| PA14_59845 | 3 | 42 | -6.470771 | hypothetical protein | |
| PA14_59850 | 1 | 32 | -4.971241 | hypothetical protein | |
| PA14_59860 | 0 | 30 | -3.229435 | type III effector Hop protein | |
| PA14_59870 | -1 | 26 | -3.747050 | hypothetical protein | |
| PA14_59880 | 0 | 25 | -3.649654 | hypothetical protein | |
| PA14_59890 | -1 | 18 | -3.373505 | hypothetical protein | |
| PA14_59900 | -1 | 19 | -3.762964 | hypothetical protein | |
| PA14_59910 | -1 | 20 | -3.614221 | hypothetical protein | |
| PA14_59920 | -1 | 20 | -4.297533 | hypothetical protein | |
| PA14_59930 | 0 | 23 | -4.446887 | hypothetical protein | |
| PA14_59940 | -1 | 23 | -4.232181 | hypothetical protein | |
| PA14_59950 | 1 | 30 | -4.157680 | hypothetical protein | |
| PA14_59960 | 1 | 28 | -3.774639 | protein-disulfide isomerase | |
| PA14_59970 | 0 | 27 | -5.121075 | hypothetical protein | |
| PA14_59980 | 0 | 28 | -5.764437 | hypothetical protein | |
| PA14_59990 | 0 | 27 | -5.801229 | hypothetical protein | |
| PA14_60000 | 0 | 28 | -6.719578 | hypothetical protein | |
| PA14_60010 | 1 | 39 | -9.305729 | hypothetical protein | |
| PA14_60020 | -1 | 37 | -8.355545 | hypothetical protein | |
| PA14_60030 | 0 | 40 | -7.857459 | hypothetical protein | |
| PA14_60040 | -1 | 40 | -8.185028 | hypothetical protein | |
| PA14_60050 | -1 | 45 | -9.583322 | plasmid stablization protein | |
| PA14_60060 | 0 | 48 | -10.461154 | hypothetical protein | |
| PA14_60070 | 0 | 47 | -10.332242 | hypothetical protein | |
| PA14_60080 | 1 | 54 | -11.450416 | hypothetical protein | |
| PA14_60090 | 2 | 57 | -12.349087 | hypothetical protein | |
| PA14_60100 | 0 | 32 | -8.040139 | deoxycytidine triphosphate deaminase | |
| PA14_60110 | -1 | 25 | -5.740431 | hypothetical protein | |
| PA14_60120 | -1 | 18 | -4.078622 | deoxycytidine deaminase | |
| PA14_60130 | -1 | 13 | -3.379165 | hypothetical protein | |
| PA14_60140 | -1 | 7 | -1.516303 | xerD-like integrase | |
| PA14_60190 | 0 | 8 | -0.755349 | ***clpB protein | |
| PA14_60200 | -2 | 12 | -0.218922 | hypothetical protein | |
| PA14_60210 | -1 | 9 | -0.585960 | pseudouridine synthase | |
| PA14_60230 | -1 | 11 | -1.557123 | competence protein ComL | |
| PA14_60240 | -1 | 18 | -3.113323 | hypothetical protein | |
| PA14_60250 | -2 | 19 | -3.903981 | two-component sensor PilS | |
| PA14_60260 | 1 | 35 | -8.058938 | two-component response regulator PilR | |
| PA14_60270 | 2 | 44 | -10.071860 | glycine/D-amino acid oxidases | |
| PA14_60280 | 2 | 42 | -10.747822 | type 4 fimbrial biogenesis protein FimU | |
| PA14_60290 | 2 | 39 | -10.182655 | type 4 fimbrial biogenesis protein PilW | |
| PA14_60300 | 2 | 33 | -9.410307 | type 4 fimbrial biogenesis protein PilX | |
| PA14_60310 | 1 | 21 | -7.018934 | type 4 fimbrial biogenesis protein PilY1 |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_58900 | PF05860 | 66 | 8e-15 | haemagglutination activity domain. | |
>PF05860#haemagglutination activity domain. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_59060 | FbpA_PF05833 | 28 | 0.004 | Fibronectin-binding protein | |
>FbpA_PF05833#Fibronectin-binding protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_59070 | ARGREPRESSOR | 34 | 7e-04 | Bacterial arginine repressor signature. | |
>ARGREPRESSOR#Bacterial arginine repressor signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_59210 | SALSPVBPROT | 30 | 0.027 | Salmonella virulence plasmid 65kDa B protein signature. | |
>SALSPVBPROT#Salmonella virulence plasmid 65kDa B protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_59220 | CHANLCOLICIN | 162 | 2e-46 | Channel forming colicin signature. | |
>CHANLCOLICIN#Channel forming colicin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_59240 | IGASERPTASE | 37 | 2e-04 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_59250 | BCTERIALGSPD | 87 | 7e-20 | Bacterial general secretion pathway protein D signa... | |
>BCTERIALGSPD#Bacterial general secretion pathway protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_59310 | BCTERIALGSPF | 71 | 6e-16 | Bacterial general secretion pathway protein F signa... | |
>BCTERIALGSPF#Bacterial general secretion pathway protein F | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_59320 | PilS_PF08805 | 117 | 8e-36 | PilS N terminal | |
>PilS_PF08805#PilS N terminal | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_59350 | BCTERIALGSPG | 37 | 3e-05 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_59510 | FbpA_PF05833 | 26 | 0.017 | Fibronectin-binding protein | |
>FbpA_PF05833#Fibronectin-binding protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_59640 | TONBPROTEIN | 30 | 0.004 | Gram-negative bacterial tonB protein signature. | |
>TONBPROTEIN#Gram-negative bacterial tonB protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_59770 | HTHFIS | 51 | 1e-09 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_59780 | HTHFIS | 70 | 2e-14 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_59790 | HTHFIS | 66 | 8e-14 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_59800 | HTHFIS | 65 | 6e-13 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_59920 | BCTERIALGSPG | 31 | 0.007 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_59940 | CHANLCOLICIN | 33 | 0.005 | Channel forming colicin signature. | |
>CHANLCOLICIN#Channel forming colicin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_60190 | HTHFIS | 43 | 4e-06 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_60260 | HTHFIS | 525 | 0.0 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_60280 | BCTERIALGSPG | 44 | 1e-08 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_60300 | BCTERIALGSPG | 29 | 0.009 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
| 69 | PA14_61440 | PA14_61530 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_61440 | 3 | 9 | -0.904255 | hypothetical protein | |
| PA14_61450 | 4 | 11 | -0.698392 | hypothetical protein | |
| PA14_61460 | 4 | 12 | -0.934389 | hypoxanthine-guanine phosphoribosyltransferase | |
| PA14_61470 | 4 | 11 | 0.162311 | uracil phosphoribosyltransferase | |
| PA14_61480 | 4 | 13 | 0.933144 | uracil permease | |
| PA14_61500 | 7 | 16 | 1.002604 | hypothetical protein | |
| PA14_61510 | 4 | 13 | 1.332498 | hypothetical protein | |
| PA14_61520 | 3 | 11 | 1.279289 | hypothetical protein | |
| PA14_61530 | 2 | 10 | 1.323131 | pili assembly chaperone |
| 70 | PA14_62020 | PA14_62120 | Y ![]() | N | Y | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_62020 | -1 | 11 | -3.380198 | paraquat-inducible protein B-like protein | |
| PA14_62030 | 0 | 15 | -4.620442 | paraquat-inducible protein A-like protein | |
| PA14_62040 | -1 | 16 | -4.870324 | paraquat-inducible protein | |
| PA14_62100 | 1 | 14 | -4.694720 | **sulfite oxidase subunit YedZ | |
| PA14_62110 | 3 | 14 | -4.512188 | sulfite oxidase subunit YedY | |
| PA14_62120 | 2 | 13 | -4.225314 | phosphatidylserine synthase |
| 71 | PA14_63410 | PA14_63730 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_63410 | 3 | 15 | -1.511208 | hypothetical protein | |
| PA14_63420 | 1 | 12 | -0.656478 | hypothetical protein | |
| PA14_63430 | 2 | 11 | -0.208271 | hypothetical protein | |
| PA14_63440 | 1 | 13 | -0.128248 | bacteriophage integrase | |
| PA14_63450 | 0 | 13 | 2.102531 | hypothetical protein | |
| PA14_63470 | 0 | 13 | 3.215116 | *methyltransferase | |
| PA14_63480 | -2 | 12 | 3.346445 | amino acid permease | |
| PA14_63500 | -1 | 14 | 3.299873 | hypothetical protein | |
| PA14_63520 | 0 | 13 | 3.237534 | transcriptional regulator | |
| PA14_63530 | -1 | 12 | 1.679741 | selenocysteine-specific elongation factor | |
| PA14_63540 | 0 | 12 | 0.594938 | selenocysteine synthase | |
| PA14_63550 | 0 | 11 | 0.636887 | formate dehydrogenase accessory protein FdhE | |
| PA14_63570 | 0 | 11 | 0.305409 | nitrate-inducible formate dehydrogenase subunit | |
| PA14_63580 | -1 | 10 | 1.315459 | nitrate-inducible formate dehydrogenase subunit | |
| PA14_63605 | -2 | 9 | 1.592482 | formate dehydrogenase-O, major subunit | |
| PA14_63620 | -1 | 8 | 3.857170 | lipase LipC | |
| PA14_63640 | 0 | 9 | 3.934751 | 2,4-dienoyl-CoA reductase | |
| PA14_63650 | 0 | 8 | 3.641643 | hypothetical protein | |
| PA14_63660 | 1 | 9 | 4.041852 | hypothetical protein | |
| PA14_63680 | 3 | 10 | 3.626598 | hypothetical protein | |
| PA14_63700 | 5 | 8 | 3.667037 | hypothetical protein | |
| PA14_63710 | 4 | 10 | 3.082728 | glycosyl transferase family protein | |
| PA14_63720 | 5 | 8 | 3.853501 | hypothetical protein | |
| PA14_63730 | 2 | 8 | 2.100149 | transporter |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_63530 | TCRTETOQM | 57 | 2e-10 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
| 72 | PA14_64550 | PA14_64850 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_64550 | 2 | 12 | 1.729638 | hypothetical protein | |
| PA14_64560 | 2 | 11 | 2.681477 | hypothetical protein | |
| PA14_64570 | 2 | 12 | 2.662639 | two-component response regulator | |
| PA14_64580 | 2 | 12 | 3.346515 | two-component sensor | |
| PA14_64590 | 2 | 12 | 3.213741 | MFS transporter | |
| PA14_64610 | 0 | 11 | 3.609294 | hypothetical protein | |
| PA14_64620 | 2 | 14 | 5.095359 | oxidoreductase | |
| PA14_64640 | 1 | 13 | 5.124521 | TetR family transcriptional regulator | |
| PA14_64650 | 1 | 13 | 4.716793 | urease accessory protein UreE | |
| PA14_64660 | -1 | 8 | 2.407781 | urease accessory protein UreF | |
| PA14_64670 | 0 | 8 | 1.554603 | urease accessory protein UreG | |
| PA14_64680 | -1 | 8 | 1.919342 | hypothetical protein | |
| PA14_64690 | -1 | 8 | 1.806710 | transmembrane sensor | |
| PA14_64700 | -1 | 8 | 1.625308 | RNA polymerase sigma factor | |
| PA14_64710 | -1 | 9 | 1.753887 | extracellular heme-binding protein | |
| PA14_64720 | -1 | 11 | 3.108612 | porin | |
| PA14_64740 | -1 | 12 | 3.689606 | aldehyde dehydrogenase | |
| PA14_64750 | 0 | 10 | 3.833845 | MFS transporter | |
| PA14_64770 | 0 | 10 | 3.675236 | benzoylformate decarboxylase | |
| PA14_64780 | 0 | 11 | 3.227612 | transcriptional regulator | |
| PA14_64790 | 0 | 11 | 3.631888 | MFS transporter | |
| PA14_64800 | 0 | 11 | 2.435229 | vanillate O-demethylase oxygenase | |
| PA14_64810 | 1 | 11 | 1.721326 | vanillate O-demethylase | |
| PA14_64820 | 1 | 13 | 0.950123 | transcriptional regulator | |
| PA14_64840 | 2 | 15 | -0.050383 | short-chain dehydrogenase | |
| PA14_64850 | 2 | 14 | -0.614570 | ornithine cyclodeaminase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_64570 | HTHFIS | 76 | 3e-18 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_64590 | TCRTETA | 33 | 0.002 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_64640 | HTHTETR | 64 | 6e-15 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_64750 | TCRTETB | 46 | 1e-07 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_64790 | TCRTETA | 50 | 9e-09 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_64840 | DHBDHDRGNASE | 79 | 1e-19 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_64850 | SECA | 29 | 0.020 | SecA protein signature. | |
>SECA#SecA protein signature. | |||||
| 73 | PA14_65760 | PA14_66090 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_65760 | -1 | 7 | 3.216037 | NAD(P)H quinone oxidoreductase | |
| PA14_65770 | -1 | 7 | 2.956894 | aspartate transaminase | |
| PA14_65795 | -1 | 8 | 3.091289 | hypothetical protein | |
| PA14_65810 | -1 | 9 | 2.754277 | hypothetical protein | |
| PA14_65820 | -1 | 10 | 2.459097 | acyl-CoA dehydrogenase | |
| PA14_65840 | -1 | 12 | 2.907002 | enoyl-CoA hydratase/isomerase | |
| PA14_65850 | -2 | 13 | 2.771163 | amino acid ABC transporter permease | |
| PA14_65860 | -2 | 12 | 3.594552 | two-component sensor | |
| PA14_65870 | 0 | 11 | 3.023801 | hypothetical protein | |
| PA14_65880 | 0 | 10 | 3.429913 | two-component response regulator | |
| PA14_65900 | 0 | 11 | 3.700862 | TetR family transcriptional regulator | |
| PA14_65920 | 1 | 11 | 3.594154 | hypothetical protein | |
| PA14_65940 | 0 | 10 | 3.719073 | oxidoreductase | |
| PA14_65950 | 0 | 11 | 3.267531 | transcriptional regulator | |
| PA14_65960 | 0 | 10 | 3.687440 | 3-deoxy-D-manno-octulosonic-acid transferase | |
| PA14_65970 | -1 | 9 | 2.145725 | transcriptional regulator | |
| PA14_65990 | -2 | 10 | 1.924315 | SMR multidrug efflux transporter | |
| PA14_66000 | -2 | 10 | 2.073976 | hypothetical protein | |
| PA14_66010 | -3 | 11 | 0.349783 | hypothetical protein | |
| PA14_66020 | -3 | 9 | -0.033688 | hypothetical protein | |
| PA14_66040 | -2 | 10 | -1.504768 | acyl-CoA dehydrogenase | |
| PA14_66050 | -3 | 10 | -2.345425 | acyl-CoA dehydrogenase | |
| PA14_66060 | -2 | 11 | -3.528240 | bifunctional heptose 7-phosphate kinase/heptose | |
| PA14_66080 | -1 | 14 | -3.791043 | transport protein MsbA | |
| PA14_66090 | -1 | 15 | -3.164925 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_65860 | HTHFIS | 55 | 9e-10 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_65880 | HTHFIS | 93 | 7e-24 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_65900 | HTHTETR | 74 | 2e-18 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_66060 | LPSBIOSNTHSS | 28 | 0.044 | Lipopolysaccharide core biosynthesis protein signat... | |
>LPSBIOSNTHSS#Lipopolysaccharide core biosynthesis protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_66080 | ACRIFLAVINRP | 31 | 0.013 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| 74 | PA14_66580 | PA14_66640 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_66580 | 0 | 18 | -4.137453 | hypothetical protein | |
| PA14_66600 | 1 | 20 | -5.992862 | 3-dehydroquinate synthase | |
| PA14_66610 | 2 | 19 | -6.165129 | shikimate kinase | |
| PA14_66620 | 1 | 13 | -5.376682 | type 4 fimbrial biogenesis outer membrane | |
| PA14_66630 | 0 | 11 | -4.327718 | type 4 fimbrial biogenesis protein PilP | |
| PA14_66640 | -1 | 9 | -3.198923 | type 4 fimbrial biogenesis protein PilO |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_66580 | PF03544 | 45 | 4e-07 | Gram-negative bacterial tonB protein | |
>PF03544#Gram-negative bacterial tonB protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_66610 | PF05272 | 29 | 0.011 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_66620 | BCTERIALGSPD | 297 | 5e-93 | Bacterial general secretion pathway protein D signa... | |
>BCTERIALGSPD#Bacterial general secretion pathway protein D | |||||
| 75 | PA14_66750 | PA14_66910 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_66750 | 2 | 19 | -0.503018 | arginyl-tRNA synthetase | |
| PA14_66760 | -1 | 19 | -0.544384 | hypothetical protein | |
| PA14_66770 | -1 | 17 | -1.102572 | ATP-dependent protease peptidase subunit | |
| PA14_66790 | -1 | 15 | -1.274747 | ATP-dependent protease ATP-binding subunit HslU | |
| PA14_66800 | 2 | 12 | -0.985406 | hypothetical protein | |
| PA14_66820 | 3 | 11 | -1.675193 | poly(3-hydroxyalkanoic acid) synthase 1 | |
| PA14_66830 | 3 | 13 | -1.256390 | poly(3-hydroxyalkanoic acid) depolymerase | |
| PA14_66840 | 4 | 13 | -1.615779 | poly(3-hydroxyalkanoic acid) synthase 2 | |
| PA14_66850 | 7 | 16 | -1.022068 | TetR family transcriptional regulator | |
| PA14_66875 | 7 | 15 | -0.447305 | polyhydroxyalkanoate synthesis protein PhaF | |
| PA14_66880 | 1 | 13 | -1.228712 | hypothetical protein | |
| PA14_66890 | 1 | 14 | -0.227732 | hypothetical protein | |
| PA14_66900 | 1 | 15 | -0.553378 | ubiquinone/menaquinone biosynthesis | |
| PA14_66910 | 2 | 14 | 0.186331 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_66760 | PF03544 | 29 | 0.012 | Gram-negative bacterial tonB protein | |
>PF03544#Gram-negative bacterial tonB protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_66790 | HTHFIS | 30 | 0.025 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_66850 | HTHTETR | 59 | 5e-13 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_66875 | IGASERPTASE | 47 | 6e-08 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| 76 | PA14_67120 | PA14_67310 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_67120 | 4 | 16 | -1.251378 | hypothetical protein | |
| PA14_67130 | 6 | 26 | -3.975520 | ABC transporter substrate-binding protein | |
| PA14_67140 | 8 | 39 | -5.772796 | hypothetical protein | |
| PA14_67150 | 10 | 50 | -8.156587 | oxidoreductase | |
| PA14_67170 | 7 | 46 | -8.395462 | LysR family transcriptional regulator | |
| PA14_67180 | 5 | 39 | -7.109205 | hypothetical protein | |
| PA14_67190 | 4 | 31 | -5.314815 | hypothetical protein | |
| PA14_67200 | 3 | 21 | -3.025424 | hypothetical protein | |
| PA14_67210 | 1 | 13 | -0.717743 | hypothetical protein | |
| PA14_67220 | -2 | 8 | 0.815821 | hypothetical protein | |
| PA14_67230 | -1 | 7 | 1.352848 | hypothetical protein | |
| PA14_67240 | 0 | 10 | 1.458431 | N-formylglutamate amidohydrolase | |
| PA14_67250 | 2 | 12 | 1.218395 | imidazolonepropionase | |
| PA14_67260 | 2 | 12 | 1.250394 | histidine/phenylalanine ammonia-lyase | |
| PA14_67270 | 3 | 11 | 0.401805 | ABC transporter ATP-binding protein | |
| PA14_67280 | 2 | 12 | 0.851715 | ABC transporter permease | |
| PA14_67300 | 0 | 11 | 1.204429 | ABC transporter substrate-binding protein | |
| PA14_67310 | 2 | 10 | 1.530797 | amino acid permease |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_67150 | DHBDHDRGNASE | 29 | 0.030 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_67250 | UREASE | 36 | 2e-04 | Urea amidohydrolase (urease) protein signature. | |
>UREASE#Urea amidohydrolase (urease) protein signature. | |||||
| 77 | PA14_69310 | PA14_69510 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_69310 | 6 | 19 | -0.971653 | LysE family efflux protein | |
| PA14_69320 | 6 | 21 | -1.340384 | integral membrane transport protein | |
| PA14_69330 | 8 | 24 | -1.282152 | hypothetical protein | |
| PA14_69340 | 8 | 24 | -1.003466 | ABC transporter ATP-binding protein | |
| PA14_69350 | 10 | 25 | -0.686119 | hypothetical protein | |
| PA14_69370 | 10 | 22 | -0.332086 | alginate regulatory protein AlgP | |
| PA14_69380 | 4 | 17 | -0.083529 | peptidyl-prolyl cis-trans isomerase, FkbP-type | |
| PA14_69390 | 4 | 14 | 0.560382 | anti-RNA polymerase sigma 70 factor | |
| PA14_69400 | 2 | 13 | 0.802584 | disulfide bond formation protein | |
| PA14_69420 | 3 | 15 | 0.375344 | enzyme of heme biosynthesis | |
| PA14_69430 | 0 | 9 | 0.425284 | hypothetical protein | |
| PA14_69440 | -1 | 13 | -1.504504 | uroporphyrinogen-III synthase | |
| PA14_69450 | -1 | 19 | -2.832535 | porphobilinogen deaminase | |
| PA14_69470 | 0 | 21 | -3.172167 | alginate biosynthesis regulatory protein AlgR | |
| PA14_69480 | 0 | 15 | -2.283439 | alginate biosynthesis protein AlgZ/FimS | |
| PA14_69500 | -1 | 14 | -2.255169 | argininosuccinate lyase | |
| PA14_69510 | 0 | 16 | -3.067343 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_69330 | FLGMRINGFLIF | 27 | 0.047 | Flagellar M-ring protein signature. | |
>FLGMRINGFLIF#Flagellar M-ring protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_69340 | GPOSANCHOR | 31 | 0.013 | Gram-positive coccus surface protein anchor signature. | |
>GPOSANCHOR#Gram-positive coccus surface protein anchor signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_69370 | IGASERPTASE | 59 | 2e-11 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_69380 | INFPOTNTIATR | 100 | 2e-28 | Macrophage infectivity potentiator signature. | |
>INFPOTNTIATR#Macrophage infectivity potentiator signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_69470 | HTHFIS | 79 | 4e-19 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_69480 | PF06580 | 182 | 1e-56 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| 78 | PA14_70590 | PA14_70670 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_70590 | 2 | 12 | -0.799715 | hypothetical protein | |
| PA14_70600 | -1 | 11 | 2.164114 | HU family DNA-binding protein | |
| PA14_70620 | -2 | 11 | 3.699755 | rubredoxin reductase | |
| PA14_70630 | -1 | 11 | 3.575757 | rubredoxin 2 | |
| PA14_70640 | -1 | 10 | 3.760621 | rubredoxin 1 | |
| PA14_70650 | -1 | 10 | 4.163949 | GlcG protein | |
| PA14_70670 | -1 | 8 | 3.486315 | glycolate oxidase iron-sulfur subunit |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_70600 | DNABINDINGHU | 111 | 4e-36 | Prokaryotic integration host factor signature. | |
>DNABINDINGHU#Prokaryotic integration host factor signature. | |||||
| 79 | PA14_71060 | PA14_71350 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_71060 | 2 | 12 | 2.721415 | L-serine dehydratase | |
| PA14_71070 | 4 | 12 | 2.938431 | AraC family transcriptional regulator | |
| PA14_71080 | 3 | 12 | 3.846077 | hypothetical protein | |
| PA14_71090 | 3 | 11 | 3.661157 | LysR family transcriptional regulator | |
| PA14_71100 | 2 | 10 | 3.065709 | hypothetical protein | |
| PA14_71110 | 1 | 11 | 2.912051 | lipolytic protein | |
| PA14_71120 | -1 | 11 | 2.543547 | hypothetical protein | |
| PA14_71140 | -1 | 10 | 2.997240 | 3-hydroxybutyryl-CoA dehydrogenase | |
| PA14_71150 | -1 | 10 | 2.223789 | hypothetical protein | |
| PA14_71160 | -1 | 10 | 2.303169 | hypothetical protein | |
| PA14_71170 | 0 | 11 | 2.473154 | AraC family transcriptional regulator | |
| PA14_71180 | 2 | 11 | 2.341968 | acetylornithine deacetylase | |
| PA14_71190 | 2 | 11 | 0.826845 | hypothetical protein | |
| PA14_71200 | 2 | 12 | -0.042261 | YjgF family translation initiation inhibitor | |
| PA14_71210 | 2 | 14 | -0.077878 | hypothetical protein | |
| PA14_71220 | 0 | 14 | 0.215538 | cardiolipin synthetase | |
| PA14_71230 | 1 | 16 | 0.705886 | hypothetical protein | |
| PA14_71240 | 0 | 16 | 1.159687 | hypothetical protein | |
| PA14_71250 | -2 | 14 | 1.403147 | hypothetical protein | |
| PA14_71260 | -2 | 14 | 1.423947 | FMN oxidoreductase | |
| PA14_71280 | -1 | 14 | 1.989983 | ferredoxin | |
| PA14_71300 | 1 | 18 | 1.384138 | electron transfer flavoprotein alpha subunit | |
| PA14_71310 | 5 | 21 | -1.084969 | hypothetical protein | |
| PA14_71320 | 5 | 23 | -2.458509 | hypothetical protein | |
| PA14_71330 | 4 | 24 | -0.859791 | transcriptional regulator | |
| PA14_71340 | 3 | 19 | 0.447024 | hypothetical protein | |
| PA14_71350 | 3 | 17 | 1.036184 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_71280 | TCRTETA | 34 | 0.002 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| 80 | PA14_72070 | PA14_72170 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_72070 | 2 | 12 | 2.370939 | hypothetical protein | |
| PA14_72080 | 2 | 12 | 2.668097 | hypothetical protein | |
| PA14_72090 | 1 | 11 | 2.376482 | hypothetical protein | |
| PA14_72110 | 2 | 11 | 1.605981 | hypothetical protein | |
| PA14_72130 | 4 | 11 | 1.469558 | hypothetical protein | |
| PA14_72140 | 3 | 12 | 1.500734 | hypothetical protein | |
| PA14_72150 | 2 | 11 | 1.090328 | hypothetical protein | |
| PA14_72170 | 3 | 10 | 0.735609 | citrate transporter |
| 81 | PA14_00490 | PA14_00560 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_00490 | 0 | 10 | 1.691218 | hemolysin activation/secretion protein | |
| PA14_00510 | 0 | 10 | 1.372365 | hemagglutinin | |
| PA14_00520 | 1 | 13 | -0.229365 | hypothetical protein | |
| PA14_00530 | 1 | 11 | 0.280878 | hypothetical protein | |
| PA14_00550 | 1 | 10 | 0.795726 | hypothetical protein | |
| PA14_00560 | -1 | 10 | 1.533813 | exoenzyme T |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_00490 | PF00577 | 31 | 0.020 | Outer membrane usher protein FimD | |
>PF00577#Outer membrane usher protein FimD | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_00510 | PF05860 | 86 | 2e-21 | haemagglutination activity domain. | |
>PF05860#haemagglutination activity domain. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_00520 | MICOLLPTASE | 24 | 0.013 | Microbial collagenase metalloprotease (M9) signature. | |
>MICOLLPTASE#Microbial collagenase metalloprotease (M9) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_00560 | YERSINIAYOPE | 224 | 1e-73 | Yersinia virulence determinant YopE protein signature. | |
>YERSINIAYOPE#Yersinia virulence determinant YopE protein signature. | |||||
| 82 | PA14_01940 | PA14_02090 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_01940 | 1 | 10 | 0.373423 | RND efflux membrane fusion protein | |
| PA14_01960 | 1 | 10 | -0.564569 | RND efflux membrane fusion protein | |
| PA14_01970 | 0 | 12 | -0.871917 | RND efflux transporter | |
| PA14_01980 | -1 | 12 | 1.060023 | LysR family transcriptional regulator | |
| PA14_01990 | 1 | 12 | 0.051880 | hypothetical protein | |
| PA14_02010 | 0 | 12 | 0.902409 | hypothetical protein | |
| PA14_02020 | -1 | 14 | 1.278905 | outer membrane porin | |
| PA14_02030 | -1 | 15 | 2.485710 | AraC family transcriptional regulator | |
| PA14_02050 | -2 | 15 | 2.287710 | gamma-glutamyltranspeptidase | |
| PA14_02060 | -1 | 15 | 1.228855 | hypothetical protein | |
| PA14_02070 | 0 | 14 | 2.098398 | transporter | |
| PA14_02090 | -1 | 16 | 2.185399 | TetR family transcriptional regulator |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_01940 | RTXTOXIND | 49 | 2e-08 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_01960 | RTXTOXIND | 40 | 1e-05 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_01970 | ACRIFLAVINRP | 490 | e-159 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_02030 | PHAGEIV | 30 | 0.009 | Gene IV protein signature. | |
>PHAGEIV#Gene IV protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_02050 | PF09025 | 30 | 0.015 | YopR Core | |
>PF09025#YopR Core | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_02060 | CHANNELTSX | 46 | 7e-08 | Nucleoside-specific channel-forming protein Tsx signa... | |
>CHANNELTSX#Nucleoside-specific channel-forming protein Tsx | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_02090 | HTHTETR | 67 | 1e-15 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| 83 | PA14_04820 | PA14_04900 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_04820 | -1 | 12 | 1.416296 | TetR family transcriptional regulator | |
| PA14_04830 | -1 | 14 | 1.406324 | acetyltransferase | |
| PA14_04840 | 1 | 13 | 1.558436 | hypothetical protein | |
| PA14_04850 | 1 | 13 | 0.988325 | hypothetical protein | |
| PA14_04860 | 1 | 11 | 0.637081 | methyltransferase | |
| PA14_04870 | 1 | 11 | -0.075557 | hypothetical protein | |
| PA14_04890 | 0 | 10 | 0.290207 | zinc protease | |
| PA14_04900 | 2 | 9 | 0.627083 | signal recognition particle receptor FtsY |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_04820 | HTHTETR | 59 | 5e-13 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_04840 | PF06057 | 29 | 0.024 | Type IV secretory pathway VirJ component | |
>PF06057#Type IV secretory pathway VirJ component | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_04870 | PHPHTRNFRASE | 32 | 0.008 | Phosphoenolpyruvate-protein phosphotransferase sign... | |
>PHPHTRNFRASE#Phosphoenolpyruvate-protein phosphotransferase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_04900 | TONBPROTEIN | 42 | 3e-06 | Gram-negative bacterial tonB protein signature. | |
>TONBPROTEIN#Gram-negative bacterial tonB protein signature. | |||||
| 84 | PA14_05260 | PA14_05390 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_05260 | -2 | 13 | 0.107978 | aspartate carbamoyltransferase | |
| PA14_05270 | 0 | 15 | -0.565126 | bifunctional pyrimidine regulatory protein | |
| PA14_05280 | 0 | 15 | -1.281600 | Holliday junction resolvase-like protein | |
| PA14_05290 | 0 | 12 | -1.596500 | hypothetical protein | |
| PA14_05300 | 1 | 13 | -2.110798 | TonB domain-containing protein | |
| PA14_05310 | 2 | 12 | -2.275748 | glutathione synthetase | |
| PA14_05320 | 1 | 9 | 0.810200 | twitching motility protein PilG | |
| PA14_05330 | 1 | 9 | 1.236268 | twitching motility protein PilH | |
| PA14_05340 | 1 | 9 | 1.525044 | twitching motility protein PilI | |
| PA14_05360 | 1 | 9 | 1.804111 | twitching motility protein PilJ | |
| PA14_05380 | 1 | 8 | 2.537741 | methyltransferase PilK | |
| PA14_05390 | 1 | 7 | 2.918747 | ChpA |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_05260 | TYPE3IMPPROT | 29 | 0.032 | Type III secretion system inner membrane P protein ... | |
>TYPE3IMPPROT#Type III secretion system inner membrane P protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_05300 | PF03544 | 60 | 9e-13 | Gram-negative bacterial tonB protein | |
>PF03544#Gram-negative bacterial tonB protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_05320 | HTHFIS | 73 | 3e-18 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_05330 | HTHFIS | 80 | 8e-21 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_05390 | HTHFIS | 68 | 2e-13 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 85 | PA14_05480 | PA14_05560 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_05480 | -1 | 13 | -1.730793 | hypothetical protein | |
| PA14_05500 | -1 | 14 | -1.410507 | hypothetical protein | |
| PA14_05510 | 0 | 12 | -0.781909 | hypothetical protein | |
| PA14_05520 | -1 | 10 | -0.905794 | multidrug resistance operon repressor MexR | |
| PA14_05530 | -1 | 10 | -0.783048 | RND multidrug efflux membrane fusion protein | |
| PA14_05540 | -1 | 9 | -0.762717 | RND multidrug efflux transporter MexB | |
| PA14_05550 | -1 | 10 | -0.540811 | major intrinsic multiple antibiotic resistance | |
| PA14_05560 | -1 | 10 | -0.827339 | ATP-dependent RNA helicase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_05480 | FLGFLGJ | 30 | 0.015 | Flagellar protein FlgJ signature. | |
>FLGFLGJ#Flagellar protein FlgJ signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_05530 | RTXTOXIND | 47 | 8e-08 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_05540 | ACRIFLAVINRP | 1353 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_05560 | SECA | 38 | 1e-04 | SecA protein signature. | |
>SECA#SecA protein signature. | |||||
| 86 | PA14_07810 | PA14_07860 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_07810 | -1 | 9 | -0.499845 | hypothetical protein | |
| PA14_07820 | -3 | 9 | -1.002593 | histidine kinase | |
| PA14_07840 | -2 | 10 | -1.827830 | two-component response regulator | |
| PA14_07850 | -2 | 11 | -1.867157 | ABC transporter substrate-binding protein | |
| PA14_07860 | -2 | 11 | -1.823307 | ABC transporter ATP-binding protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_07810 | CHANLCOLICIN | 29 | 0.030 | Channel forming colicin signature. | |
>CHANLCOLICIN#Channel forming colicin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_07840 | HTHFIS | 64 | 4e-14 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_07850 | BICOMPNTOXIN | 29 | 0.026 | Staphylococcal bi-component toxin signature. | |
>BICOMPNTOXIN#Staphylococcal bi-component toxin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_07860 | PF05272 | 34 | 0.001 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| 87 | PA14_09450 | PA14_09530 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_09450 | 1 | 10 | 1.543554 | phenazine biosynthesis protein PhzD | |
| PA14_09460 | -1 | 9 | 1.114234 | phenazine biosynthesis protein PhzC | |
| PA14_09470 | -1 | 7 | 0.544759 | phenazine biosynthesis protein | |
| PA14_09480 | -2 | 9 | 1.521822 | phenazine biosynthesis protein | |
| PA14_09490 | -1 | 10 | 1.943850 | phenazine-specific methyltransferase | |
| PA14_09500 | -1 | 12 | 2.598898 | outer membrane protein | |
| PA14_09520 | -2 | 12 | 2.413005 | RND efflux transporter | |
| PA14_09530 | -2 | 9 | 3.392382 | RND efflux membrane fusion protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_09450 | ISCHRISMTASE | 351 | e-125 | Isochorismatase signature. | |
>ISCHRISMTASE#Isochorismatase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_09500 | RTXTOXIND | 29 | 0.032 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_09520 | ACRIFLAVINRP | 804 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_09530 | RTXTOXIND | 46 | 1e-07 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| 88 | PA14_10110 | PA14_10170 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_10110 | 0 | 9 | 4.235549 | transporter | |
| PA14_10120 | 1 | 9 | 4.593841 | LysR family transcriptional regulator | |
| PA14_10130 | 2 | 10 | 5.369406 | short chain dehydrogenase | |
| PA14_10140 | -1 | 13 | 3.682245 | ferric enterobactin transport protein FepG | |
| PA14_10160 | -1 | 12 | 3.090839 | ferric enterobactin transport protein FepD | |
| PA14_10170 | -1 | 12 | 2.188258 | iron-enterobactin transporter periplasmic |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_10110 | TCRTETA | 50 | 6e-09 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_10130 | DHBDHDRGNASE | 120 | 3e-35 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_10160 | PF04335 | 30 | 0.011 | VirB8 type IV secretion protein | |
>PF04335#VirB8 type IV secretion protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_10170 | FERRIBNDNGPP | 37 | 6e-05 | Ferrichrome-binding periplasmic protein signature. | |
>FERRIBNDNGPP#Ferrichrome-binding periplasmic protein signature. | |||||
| 89 | PA14_10280 | PA14_10350 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_10280 | 0 | 10 | 2.828065 | short-chain dehydrogenase | |
| PA14_10290 | 1 | 11 | 2.535297 | transcriptional regulator AcoR | |
| PA14_10300 | 0 | 13 | 1.811870 | efflux protein | |
| PA14_10320 | -1 | 13 | 1.870679 | transcriptional regulator | |
| PA14_10330 | -1 | 14 | 1.573858 | outer membrane protein | |
| PA14_10340 | -3 | 11 | -0.103075 | toxin transporter | |
| PA14_10350 | 2 | 14 | -1.601374 | secretion protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_10280 | DHBDHDRGNASE | 127 | 2e-37 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_10290 | HTHFIS | 336 | e-111 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_10330 | GPOSANCHOR | 30 | 0.016 | Gram-positive coccus surface protein anchor signature. | |
>GPOSANCHOR#Gram-positive coccus surface protein anchor signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_10350 | RTXTOXIND | 155 | 7e-45 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| 90 | PA14_11080 | PA14_11140 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_11080 | 0 | 18 | 0.212543 | usher CupB3 | |
| PA14_11090 | -1 | 13 | 0.622576 | chaperone CupB4 | |
| PA14_11100 | 0 | 13 | 0.194570 | adhesive protein CupB5 | |
| PA14_11110 | -1 | 14 | -0.103595 | fimbrial protein cupB6 | |
| PA14_11120 | -1 | 12 | 0.707234 | response regulator | |
| PA14_11130 | -2 | 11 | 2.215222 | short chain dehydrogenase | |
| PA14_11140 | -2 | 9 | 2.174114 | nonribosomal peptide synthetase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_11080 | PF00577 | 743 | 0.0 | Outer membrane usher protein FimD | |
>PF00577#Outer membrane usher protein FimD | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_11100 | PF05860 | 80 | 6e-20 | haemagglutination activity domain. | |
>PF05860#haemagglutination activity domain. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_11120 | HTHFIS | 57 | 1e-11 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_11130 | DHBDHDRGNASE | 64 | 2e-14 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_11140 | NUCEPIMERASE | 46 | 4e-07 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| 91 | PA14_12730 | PA14_12820 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_12730 | 0 | 9 | 1.200259 | hypothetical protein | |
| PA14_12740 | 0 | 12 | -0.289561 | hypothetical protein | |
| PA14_12750 | 1 | 11 | -1.219836 | hypothetical protein | |
| PA14_12760 | 1 | 12 | -1.116608 | ATP-dependent RNA helicase | |
| PA14_12770 | 2 | 13 | -1.407361 | hypothetical protein | |
| PA14_12780 | 1 | 14 | -1.117004 | two-component response regulator | |
| PA14_12810 | 1 | 14 | -0.713946 | two-component response regulator | |
| PA14_12820 | 1 | 13 | 0.242800 | two-component sensor |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_12730 | ISCHRISMTASE | 45 | 3e-08 | Isochorismatase signature. | |
>ISCHRISMTASE#Isochorismatase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_12760 | TONBPROTEIN | 29 | 0.041 | Gram-negative bacterial tonB protein signature. | |
>TONBPROTEIN#Gram-negative bacterial tonB protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_12780 | HTHFIS | 73 | 2e-17 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_12810 | HTHFIS | 53 | 1e-09 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_12820 | HTHFIS | 63 | 3e-12 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 92 | PA14_13680 | PA14_13770 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_13680 | 1 | 14 | 2.624058 | short chain dehydrogenase | |
| PA14_13690 | 0 | 14 | 1.237440 | methyltransferase | |
| PA14_13710 | 0 | 15 | 0.879821 | hypothetical protein | |
| PA14_13720 | 0 | 17 | 0.533437 | hypothetical protein | |
| PA14_13730 | 0 | 17 | 0.135631 | transcriptional regulator NarL | |
| PA14_13740 | -1 | 16 | 0.320628 | two-component sensor NarX | |
| PA14_13750 | -1 | 17 | -0.072846 | nitrite extrusion protein 1 | |
| PA14_13770 | -1 | 16 | 0.437874 | nitrite extrusion protein 2 |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_13680 | DHBDHDRGNASE | 89 | 5e-23 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_13730 | HTHFIS | 80 | 1e-19 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_13740 | PF06580 | 42 | 4e-06 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_13750 | TCRTETA | 39 | 3e-05 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_13770 | TCRTETA | 30 | 0.019 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| 93 | PA14_16250 | PA14_16350 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_16250 | 0 | 8 | -0.826103 | elastase LasB | |
| PA14_16260 | 0 | 12 | 1.019638 | FMN oxidoreductase | |
| PA14_16270 | 1 | 17 | 0.505668 | hypothetical protein | |
| PA14_16280 | -3 | 12 | -0.031436 | transcriptional regulator | |
| PA14_16290 | -2 | 11 | 0.302573 | hypothetical protein | |
| PA14_16300 | -2 | 10 | 0.012734 | hypothetical protein | |
| PA14_16310 | -2 | 10 | 0.004949 | MFS permease | |
| PA14_16320 | -2 | 12 | -0.401288 | peptidyl-prolyl cis-trans isomerase, FkbP-type | |
| PA14_16330 | -2 | 12 | -0.086413 | hypothetical protein | |
| PA14_16340 | -1 | 9 | 0.704093 | hypothetical protein | |
| PA14_16350 | -2 | 8 | 0.409446 | two-component response regulator |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_16250 | THERMOLYSIN | 396 | e-135 | Thermolysin metalloprotease (M4) family signature. | |
>THERMOLYSIN#Thermolysin metalloprotease (M4) family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_16280 | HTHTETR | 63 | 1e-14 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_16310 | TCRTETB | 62 | 1e-12 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_16320 | INFPOTNTIATR | 80 | 5e-22 | Macrophage infectivity potentiator signature. | |
>INFPOTNTIATR#Macrophage infectivity potentiator signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_16350 | HTHFIS | 61 | 3e-13 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 94 | PA14_16410 | PA14_16550 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_16410 | -1 | 8 | 1.029425 | MFS transporter | |
| PA14_16430 | 0 | 10 | 1.162087 | chemotaxis transducer | |
| PA14_16440 | 1 | 11 | 1.692671 | hypothetical protein | |
| PA14_16450 | 0 | 10 | 1.127155 | methyltransferase | |
| PA14_16460 | 0 | 9 | 0.104658 | CheW domain-containing protein | |
| PA14_16470 | 1 | 9 | 0.050764 | chemotaxis sensor/effector fusion protein | |
| PA14_16480 | 1 | 11 | -1.145637 | chemotaxis-specific methylesterase | |
| PA14_16500 | 2 | 15 | -1.332646 | two-component response regulator | |
| PA14_16510 | 1 | 15 | -1.594216 | peptide chain release factor 2 | |
| PA14_16530 | 0 | 13 | -1.004243 | lysyl-tRNA synthetase | |
| PA14_16550 | -1 | 11 | -0.583096 | TetR family transcriptional regulator |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_16410 | TCRTETA | 35 | 6e-04 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_16450 | FLGHOOKFLIK | 29 | 0.037 | Flagellar hook-length control protein signature. | |
>FLGHOOKFLIK#Flagellar hook-length control protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_16470 | HTHFIS | 74 | 7e-16 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_16480 | HTHFIS | 52 | 2e-09 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_16500 | HTHFIS | 68 | 1e-14 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_16550 | HTHTETR | 52 | 4e-10 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| 95 | PA14_19270 | PA14_19370 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_19270 | 0 | 12 | 1.944421 | MFS transporter | |
| PA14_19290 | 0 | 13 | 1.801529 | ATP-dependent RNA helicase | |
| PA14_19310 | 0 | 13 | 2.362844 | hypothetical protein | |
| PA14_19320 | -1 | 12 | 2.092766 | hypothetical protein | |
| PA14_19330 | -1 | 11 | 1.848265 | hypothetical protein | |
| PA14_19340 | -1 | 11 | 2.353873 | sensor/response regulator hybrid | |
| PA14_19350 | -2 | 11 | 3.473533 | hypothetical protein | |
| PA14_19360 | -1 | 11 | 2.974752 | GNAT family acetyltransferase | |
| PA14_19370 | -1 | 10 | 2.483692 | asparagine synthetase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_19270 | TCRTETA | 58 | 4e-11 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_19310 | TCRTETA | 43 | 3e-06 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_19320 | PRPHPHLPASEC | 38 | 4e-05 | Prokaryotic zinc-dependent phospholipase C signature. | |
>PRPHPHLPASEC#Prokaryotic zinc-dependent phospholipase C signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_19340 | HTHFIS | 70 | 2e-14 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_19360 | SACTRNSFRASE | 35 | 3e-04 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_19370 | ANTHRAXTOXNA | 33 | 0.003 | Anthrax toxin LF subunit signature. | |
>ANTHRAXTOXNA#Anthrax toxin LF subunit signature. | |||||
| 96 | PA14_20020 | PA14_20110 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_20020 | 2 | 13 | 3.545704 | heme acquisition protein HasAp | |
| PA14_20030 | 1 | 13 | 3.522474 | transport protein HasD | |
| PA14_20040 | 1 | 13 | 2.279922 | metalloprotease secretion protein | |
| PA14_20050 | 2 | 15 | 1.041513 | outer membrane protein | |
| PA14_20060 | 1 | 15 | 0.065917 | hypothetical protein | |
| PA14_20070 | 1 | 16 | 0.621430 | hypothetical protein | |
| PA14_20080 | 1 | 17 | 0.273195 | hypothetical protein | |
| PA14_20100 | 2 | 17 | 0.463120 | hypothetical protein | |
| PA14_20110 | 2 | 18 | 1.177517 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_20020 | PF06438 | 276 | 1e-97 | Heme acquisition protein HasAp | |
>PF06438#Heme acquisition protein HasAp | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_20040 | RTXTOXIND | 416 | e-145 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_20050 | RTXTOXIND | 31 | 0.008 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_20080 | RTXTOXIND | 56 | 6e-11 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_20110 | ABC2TRNSPORT | 28 | 0.039 | ABC-2 type transport system membrane protein signat... | |
>ABC2TRNSPORT#ABC-2 type transport system membrane protein | |||||
| 97 | PA14_22730 | PA14_22780 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_22730 | 2 | 16 | 0.932080 | two-component sensor | |
| PA14_22740 | 1 | 13 | 0.390756 | hypothetical protein | |
| PA14_22760 | 0 | 13 | 0.384501 | two-component response regulator | |
| PA14_22770 | 1 | 13 | -0.592762 | hypothetical protein | |
| PA14_22780 | 3 | 11 | 0.132730 | YciI-like protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_22730 | PF06580 | 30 | 0.016 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_22760 | HTHFIS | 103 | 9e-28 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_22770 | IGASERPTASE | 28 | 0.010 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_22780 | adhesinmafb | 30 | 9e-04 | Neisseria meningitidis: adhesin MafB signature. | |
>adhesinmafb#Neisseria meningitidis: adhesin MafB signature. | |||||
| 98 | PA14_23450 | PA14_23530 | N ![]() | Y ![]() | Y | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_23450 | 0 | 29 | -6.804764 | NAD dependent epimerase/dehydratase | |
| PA14_23460 | 0 | 17 | -4.746729 | group 4 glycosyl transferase | |
| PA14_23470 | 0 | 7 | -2.547223 | nucleotide sugar epimerase/dehydratase WbpM | |
| PA14_23480 | -1 | 8 | -1.547263 | hypothetical protein | |
| PA14_23500 | -1 | 10 | -1.596712 | *aromatic amino acid aminotransferase | |
| PA14_23510 | -1 | 9 | -1.421285 | excinuclease ABC subunit B | |
| PA14_23520 | -1 | 9 | -0.566352 | MFS transporter | |
| PA14_23530 | -1 | 12 | 0.181920 | secretion protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_23450 | NUCEPIMERASE | 101 | 1e-26 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_23470 | NUCEPIMERASE | 57 | 9e-11 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_23520 | TCRTETB | 105 | 2e-26 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_23530 | RTXTOXIND | 185 | 9e-57 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| 99 | PA14_23890 | PA14_24230 | N ![]() | Y ![]() | Y | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_23890 | 1 | 9 | -0.042227 | hypothetical protein | |
| PA14_23900 | 1 | 8 | -0.446252 | hypothetical protein | |
| PA14_23920 | 2 | 9 | 0.072895 | amidophosphoribosyltransferase | |
| PA14_23930 | 0 | 7 | 0.937850 | O-succinylhomoserine sulfhydrylase | |
| PA14_23950 | 0 | 7 | 0.486773 | oxidoreductase | |
| PA14_23970 | -1 | 8 | 0.390208 | general secretion pathway protein D | |
| PA14_23980 | 1 | 10 | 1.250191 | secretion protein XcpP | |
| PA14_23990 | 1 | 14 | 1.727778 | general secretion pathway protein E | |
| PA14_24010 | 0 | 15 | 1.145975 | general secretion pathway protein F | |
| PA14_24020 | 3 | 16 | 1.855879 | general secretion pathway protein G | |
| PA14_24040 | 4 | 17 | 2.794594 | general secretion pathway outer membrane protein | |
| PA14_24050 | 3 | 12 | 2.736166 | general secretion pathway protein I | |
| PA14_24060 | 2 | 11 | 2.758010 | general secretion pathway protein J | |
| PA14_24070 | -1 | 10 | 2.264470 | general secretion pathway protein K | |
| PA14_24080 | 0 | 9 | 2.619758 | general secretion pathway protein L | |
| PA14_24100 | -1 | 8 | 2.495788 | general secretion pathway protein M | |
| PA14_24140 | -2 | 8 | 2.679964 | ***AraC family transcriptional regulator | |
| PA14_24150 | -1 | 9 | 2.143799 | hypothetical protein | |
| PA14_24170 | -1 | 9 | 2.175630 | 2,4-dienoyl-CoA reductase | |
| PA14_24180 | -1 | 9 | 2.449631 | hypothetical protein | |
| PA14_24190 | 0 | 11 | 2.077233 | 1-aminocyclopropane-1-carboxylate deaminase | |
| PA14_24210 | 0 | 9 | 1.007613 | hypothetical protein | |
| PA14_24220 | -1 | 10 | -0.392096 | inorganic polyphosphate/ATP-NAD kinase | |
| PA14_24230 | 0 | 12 | -0.624472 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_23890 | PERTACTIN | 34 | 3e-04 | Pertactin signature. | |
>PERTACTIN#Pertactin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_23950 | DHBDHDRGNASE | 114 | 6e-33 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_23970 | BCTERIALGSPD | 594 | 0.0 | Bacterial general secretion pathway protein D signa... | |
>BCTERIALGSPD#Bacterial general secretion pathway protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_23980 | BCTERIALGSPC | 49 | 3e-09 | Bacterial general secretion pathway protein C signa... | |
>BCTERIALGSPC#Bacterial general secretion pathway protein C | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_24010 | BCTERIALGSPF | 501 | e-180 | Bacterial general secretion pathway protein F signa... | |
>BCTERIALGSPF#Bacterial general secretion pathway protein F | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_24020 | BCTERIALGSPG | 211 | 6e-74 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_24040 | BCTERIALGSPH | 142 | 6e-46 | Bacterial general secretion pathway protein H signa... | |
>BCTERIALGSPH#Bacterial general secretion pathway protein H | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_24050 | BCTERIALGSPG | 36 | 8e-06 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_24060 | PilS_PF08805 | 36 | 7e-05 | PilS N terminal | |
>PilS_PF08805#PilS N terminal | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_24070 | VACCYTOTOXIN | 30 | 0.015 | Helicobacter pylori vacuolating cytotoxin signature. | |
>VACCYTOTOXIN#Helicobacter pylori vacuolating cytotoxin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_24100 | PYOCINKILLER | 28 | 0.027 | Pyocin S killer protein signature. | |
>PYOCINKILLER#Pyocin S killer protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_24180 | RTXTOXIND | 53 | 2e-09 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_24210 | FLGFLIJ | 29 | 0.020 | Flagellar FliJ protein signature. | |
>FLGFLIJ#Flagellar FliJ protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_24220 | PF06057 | 29 | 0.028 | Type IV secretory pathway VirJ component | |
>PF06057#Type IV secretory pathway VirJ component | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_24230 | ANTHRAXTOXNA | 31 | 0.008 | Anthrax toxin LF subunit signature. | |
>ANTHRAXTOXNA#Anthrax toxin LF subunit signature. | |||||
| 100 | PA14_24330 | PA14_24390 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_24330 | -2 | 8 | 1.329430 | hypothetical protein | |
| PA14_24340 | 0 | 10 | 3.110602 | two-component sensor | |
| PA14_24350 | 0 | 9 | 3.563496 | two-component response regulator | |
| PA14_24360 | 1 | 10 | 3.852353 | hypothetical protein | |
| PA14_24370 | 2 | 11 | 3.989798 | hypothetical protein | |
| PA14_24380 | 2 | 11 | 3.524273 | hypothetical protein | |
| PA14_24390 | 1 | 12 | 2.893325 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_24330 | ACRIFLAVINRP | 71 | 1e-14 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_24340 | PF07675 | 32 | 0.005 | Cleaved Adhesin | |
>PF07675#Cleaved Adhesin | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_24350 | HTHFIS | 84 | 5e-21 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_24360 | SUBTILISIN | 109 | 6e-28 | Subtilisin serine protease family (S8) signature. | |
>SUBTILISIN#Subtilisin serine protease family (S8) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_24390 | TYPE4SSCAGX | 37 | 1e-04 | Type IV secretion system CagX conjugation protein si... | |
>TYPE4SSCAGX#Type IV secretion system CagX conjugation protein | |||||
| 101 | PA14_26620 | PA14_26830 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_26620 | -2 | 15 | 1.927793 | hypothetical protein | |
| PA14_26640 | -2 | 16 | 1.854303 | long-chain-acyl-CoA synthetase | |
| PA14_26650 | -1 | 16 | 2.294530 | short chain dehydrogenase | |
| PA14_26670 | -1 | 15 | 2.356280 | biotin carboxylase | |
| PA14_26690 | -1 | 14 | 1.586253 | enoyl-CoA hydratase/isomerase | |
| PA14_26700 | -1 | 13 | 0.890733 | acyl-CoA dehydrogenase | |
| PA14_26720 | -1 | 12 | 1.411467 | biotin-dependent carboxylase | |
| PA14_26730 | 1 | 12 | 1.474100 | short-chain dehydrogenase | |
| PA14_26750 | 2 | 12 | 1.612697 | hypothetical protein | |
| PA14_26760 | 3 | 13 | 0.631026 | transcriptional regulator | |
| PA14_26770 | 1 | 12 | 1.349938 | hypothetical protein | |
| PA14_26780 | 0 | 12 | 1.561272 | hypothetical protein | |
| PA14_26810 | -1 | 11 | 1.799275 | two-component sensor | |
| PA14_26830 | -1 | 11 | 1.965204 | two-component response regulator |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_26620 | IGASERPTASE | 32 | 6e-04 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_26650 | DHBDHDRGNASE | 81 | 3e-20 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_26670 | RTXTOXIND | 38 | 2e-04 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_26730 | DHBDHDRGNASE | 119 | 3e-34 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_26760 | HTHTETR | 70 | 3e-17 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_26810 | PF06580 | 47 | 8e-08 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_26830 | HTHFIS | 98 | 5e-25 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 102 | PA14_29480 | PA14_29590 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_29480 | -1 | 29 | -2.816729 | ABC-2 transporter permease | |
| PA14_29490 | 1 | 31 | -1.801067 | type II secretion protein | |
| PA14_29500 | 1 | 34 | -1.341951 | type II secretion system protein | |
| PA14_29510 | 2 | 39 | -1.550336 | type II secretion system protein | |
| PA14_29520 | 2 | 41 | -1.992822 | type II secretion system protein | |
| PA14_29530 | 2 | 39 | -2.635370 | type II secretion system protein | |
| PA14_29540 | 2 | 36 | -3.675359 | type II secretion system protein | |
| PA14_29550 | 1 | 35 | -4.517772 | hypothetical protein | |
| PA14_29560 | 1 | 21 | -2.418691 | hypothetical protein | |
| PA14_29570 | -1 | 13 | -1.884810 | hypothetical protein | |
| PA14_29575 | -1 | 12 | -1.296623 | hypothetical protein | |
| PA14_29590 | 0 | 11 | 0.380156 | transcriptional regulator |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_29480 | ABC2TRNSPORT | 33 | 8e-04 | ABC-2 type transport system membrane protein signat... | |
>ABC2TRNSPORT#ABC-2 type transport system membrane protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_29500 | BCTERIALGSPF | 186 | 2e-57 | Bacterial general secretion pathway protein F signa... | |
>BCTERIALGSPF#Bacterial general secretion pathway protein F | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_29510 | BCTERIALGSPG | 119 | 1e-37 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_29520 | BCTERIALGSPG | 39 | 1e-06 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_29530 | PilS_PF08805 | 30 | 0.003 | PilS N terminal | |
>PilS_PF08805#PilS N terminal | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_29540 | BCTERIALGSPG | 30 | 0.003 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_29590 | PYOCINKILLER | 29 | 0.005 | Pyocin S killer protein signature. | |
>PYOCINKILLER#Pyocin S killer protein signature. | |||||
| 103 | PA14_29710 | PA14_29760 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_29710 | 1 | 10 | 1.201776 | hypothetical protein | |
| PA14_29720 | 1 | 8 | 0.877595 | hypothetical protein | |
| PA14_29730 | 1 | 10 | 0.937850 | two-component response regulator | |
| PA14_29740 | 1 | 10 | 0.421417 | two-component sensor | |
| PA14_29750 | 0 | 10 | 0.401770 | hypothetical protein | |
| PA14_29760 | 1 | 12 | 0.124421 | chemotaxis transducer |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_29710 | THERMOLYSIN | 27 | 0.010 | Thermolysin metalloprotease (M4) family signature. | |
>THERMOLYSIN#Thermolysin metalloprotease (M4) family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_29730 | HTHFIS | 78 | 9e-19 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_29740 | PF06580 | 36 | 4e-04 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_29760 | FLAGELLIN | 30 | 0.045 | Flagellin signature. | |
>FLAGELLIN#Flagellin signature. | |||||
| 104 | PA14_30830 | PA14_30870 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_30830 | -1 | 16 | -0.407665 | two-component response regulator | |
| PA14_30840 | 0 | 21 | 0.154498 | signal transduction histidine kinase | |
| PA14_30850 | 3 | 19 | 0.707435 | TrbI-like protein | |
| PA14_30860 | 3 | 20 | 0.404651 | TrbG-like protein | |
| PA14_30870 | 4 | 22 | 0.092618 | conjugal transfer protein TrbF |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_30830 | HTHFIS | 106 | 4e-27 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_30840 | PF06580 | 34 | 7e-04 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_30860 | PF03544 | 33 | 0.002 | Gram-negative bacterial tonB protein | |
>PF03544#Gram-negative bacterial tonB protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_30870 | PF04335 | 58 | 2e-12 | VirB8 type IV secretion protein | |
>PF04335#VirB8 type IV secretion protein | |||||
| 105 | PA14_31870 | PA14_32130 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_31870 | 2 | 15 | 1.456775 | RND efflux membrane fusion protein | |
| PA14_31890 | 3 | 16 | 1.292954 | RND efflux transporter | |
| PA14_31900 | 1 | 14 | 1.996862 | efflux transporter | |
| PA14_31920 | 1 | 13 | 2.931991 | outer membrane protein | |
| PA14_31930 | 1 | 13 | 2.804428 | hypothetical protein | |
| PA14_31950 | 1 | 14 | 2.274954 | two-component sensor | |
| PA14_31960 | 1 | 15 | 1.753472 | two-component response regulator | |
| PA14_31970 | 2 | 16 | 2.395775 | CzcC family cobalt/zinc/cadmium efflux | |
| PA14_31990 | 1 | 15 | 2.096422 | cobalt/zinc/cadmium efflux RND transporter, | |
| PA14_32060 | 3 | 15 | 1.992163 | transcriptional regulator XylS | |
| PA14_32080 | 4 | 15 | 1.709301 | toluate 1,2-dioxygenase subunit alpha | |
| PA14_32100 | 3 | 16 | 1.621770 | toluate 1,2-dioxygenase subunit beta | |
| PA14_32110 | 2 | 15 | 2.085630 | toluate 1,2-dioxygenase electron transfer | |
| PA14_32130 | 2 | 14 | 2.199149 | 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_31870 | RTXTOXIND | 44 | 8e-07 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_31890 | ACRIFLAVINRP | 840 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_31900 | ACRIFLAVINRP | 816 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_31920 | RTXTOXIND | 38 | 6e-05 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_31950 | PF06580 | 36 | 3e-04 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_31960 | HTHFIS | 81 | 7e-20 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_31990 | RTXTOXIND | 46 | 2e-07 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_32080 | 60KDINNERMP | 30 | 0.017 | 60kDa inner membrane protein signature. | |
>60KDINNERMP#60kDa inner membrane protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_32130 | DHBDHDRGNASE | 101 | 5e-28 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| 106 | PA14_32700 | PA14_32790 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_32700 | 1 | 12 | 1.866922 | transcriptional regulator | |
| PA14_32710 | 1 | 13 | 1.681715 | ECF subfamily RNA polymerase sigma-70 factor | |
| PA14_32720 | 1 | 13 | -0.835859 | transmembrane sensor | |
| PA14_32740 | 1 | 14 | -1.257859 | TonB-dependent receptor | |
| PA14_32750 | 1 | 19 | -1.779421 | hypothetical protein | |
| PA14_32770 | 2 | 20 | -1.955687 | hypothetical protein | |
| PA14_32780 | 2 | 20 | -2.210451 | hypothetical protein | |
| PA14_32790 | 2 | 22 | -2.646394 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_32700 | MPTASEINHBTR | 28 | 0.030 | Metalloprotease inhibitor signature. | |
>MPTASEINHBTR#Metalloprotease inhibitor signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_32740 | TYPE3OMGPROT | 34 | 0.002 | Type III secretion system outer membrane G protein ... | |
>TYPE3OMGPROT#Type III secretion system outer membrane G protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_32780 | PF00577 | 30 | 0.028 | Outer membrane usher protein FimD | |
>PF00577#Outer membrane usher protein FimD | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_32790 | PF05860 | 82 | 4e-20 | haemagglutination activity domain. | |
>PF05860#haemagglutination activity domain. | |||||
| 107 | PA14_38370 | PA14_38410 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_38370 | 1 | 11 | 1.280646 | hypothetical protein | |
| PA14_38380 | 1 | 11 | 1.007258 | transcriptional regulator | |
| PA14_38395 | 1 | 12 | 1.252826 | periplasmic multidrug efflux lipoprotein | |
| PA14_38410 | 0 | 12 | 0.605263 | multidrug efflux protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_38370 | PF05272 | 28 | 0.002 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_38380 | HTHTETR | 97 | 3e-27 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_38395 | RTXTOXIND | 42 | 3e-06 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_38410 | ACRIFLAVINRP | 1087 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| 108 | PA14_42200 | PA14_42290 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_42200 | -1 | 7 | 0.254231 | hypothetical protein | |
| PA14_42220 | -1 | 8 | 0.299201 | membrane sensor domain-containing protein | |
| PA14_42230 | -1 | 9 | 0.357730 | beta-glucosidase | |
| PA14_42250 | 3 | 17 | 0.226301 | type III secretion system protein | |
| PA14_42260 | 4 | 18 | -0.544065 | PscK type III export protein | |
| PA14_42270 | 3 | 19 | -1.111733 | pscJ type III export protein | |
| PA14_42280 | 3 | 14 | 0.545985 | type III export protein PscI | |
| PA14_42290 | 1 | 14 | 0.760265 | type III export protein PscH |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_42200 | SECBCHAPRONE | 26 | 0.025 | Bacterial protein-transport SecB chaperone protein ... | |
>SECBCHAPRONE#Bacterial protein-transport SecB chaperone protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_42250 | TYPE4SSCAGX | 30 | 0.008 | Type IV secretion system CagX conjugation protein si... | |
>TYPE4SSCAGX#Type IV secretion system CagX conjugation protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_42270 | FLGMRINGFLIF | 75 | 1e-17 | Flagellar M-ring protein signature. | |
>FLGMRINGFLIF#Flagellar M-ring protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_42290 | PF09025 | 205 | 2e-71 | YopR Core | |
>PF09025#YopR Core | |||||
| 109 | PA14_42350 | PA14_42470 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_42350 | -2 | 17 | -0.516131 | Type III secretion outer membrane protein PscC | |
| PA14_42360 | 1 | 25 | -1.632369 | type III export apparatus protein | |
| PA14_42380 | 2 | 23 | -1.757826 | hypothetical protein | |
| PA14_42390 | 3 | 23 | -2.179553 | transcriptional regulator ExsA | |
| PA14_42400 | 2 | 19 | -0.470848 | exoenzyme S synthesis protein B | |
| PA14_42410 | 2 | 17 | -1.171166 | hypothetical protein | |
| PA14_42430 | 2 | 16 | -1.303247 | exoenzyme S synthesis protein C | |
| PA14_42440 | 2 | 15 | -0.443785 | translocator outer membrane protein PopD | |
| PA14_42450 | 2 | 13 | -0.953992 | translocator protein PopB | |
| PA14_42460 | 2 | 14 | -0.449348 | regulatory protein PcrH | |
| PA14_42470 | 3 | 14 | 0.108222 | type III secretion protein PcrV |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_42350 | TYPE3OMGPROT | 815 | 0.0 | Type III secretion system outer membrane G protein ... | |
>TYPE3OMGPROT#Type III secretion system outer membrane G protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_42360 | PF05932 | 93 | 2e-27 | Tir chaperone protein (CesT) | |
>PF05932#Tir chaperone protein (CesT) | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_42430 | PF05932 | 47 | 6e-10 | Tir chaperone protein (CesT) | |
>PF05932#Tir chaperone protein (CesT) | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_42440 | PF05844 | 382 | e-136 | YopD protein | |
>PF05844#YopD protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_42450 | BACINVASINB | 29 | 0.044 | Salmonella/Shigella invasin protein B signature. | |
>BACINVASINB#Salmonella/Shigella invasin protein B signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_42460 | SYCDCHAPRONE | 202 | 2e-69 | Gram-negative bacterial type III secretion SycD cha... | |
>SYCDCHAPRONE#Gram-negative bacterial type III secretion SycD | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_42470 | LCRVANTIGEN | 346 | e-122 | Low calcium response V antigen signature. | |
>LCRVANTIGEN#Low calcium response V antigen signature. | |||||
| 110 | PA14_42550 | PA14_42660 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_42550 | 1 | 15 | 2.410316 | Type III secretion outer membrane protein PopN | |
| PA14_42570 | 0 | 15 | 2.095382 | type III secretion system ATPase | |
| PA14_42580 | 3 | 18 | 1.753984 | translocation protein in type III secretion | |
| PA14_42600 | 3 | 18 | 0.620736 | translocation protein in type III secretion | |
| PA14_42610 | 2 | 13 | -0.908590 | type III secretion system protein | |
| PA14_42620 | 1 | 11 | -1.525956 | type III secretion system protein | |
| PA14_42630 | 1 | 11 | -1.431078 | translocation protein in type III secretion | |
| PA14_42640 | -1 | 10 | -0.587635 | translocation protein in type III secretion | |
| PA14_42660 | -1 | 9 | -0.805390 | translocation protein in type III secretion |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_42550 | PF07201 | 284 | 4e-98 | Hypersensitivity response secretion protein HrpJ | |
>PF07201#Hypersensitivity response secretion protein HrpJ | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_42600 | TONBPROTEIN | 30 | 0.008 | Gram-negative bacterial tonB protein signature. | |
>TONBPROTEIN#Gram-negative bacterial tonB protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_42610 | TYPE3OMOPROT | 84 | 9e-21 | Type III secretion system outer membrane O protein ... | |
>TYPE3OMOPROT#Type III secretion system outer membrane O protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_42620 | TYPE3IMPPROT | 246 | 3e-85 | Type III secretion system inner membrane P protein ... | |
>TYPE3IMPPROT#Type III secretion system inner membrane P protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_42630 | TYPE3IMQPROT | 68 | 4e-19 | Type III secretion system inner membrane Q protein ... | |
>TYPE3IMQPROT#Type III secretion system inner membrane Q protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_42640 | TYPE3IMRPROT | 140 | 9e-43 | Type III secretion system inner membrane R protein ... | |
>TYPE3IMRPROT#Type III secretion system inner membrane R protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_42660 | TYPE3IMSPROT | 421 | e-150 | Type III secretion system inner membrane S protein ... | |
>TYPE3IMSPROT#Type III secretion system inner membrane S protein | |||||
| 111 | PA14_42750 | PA14_42820 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_42750 | -1 | 9 | 1.087953 | MFS metabolite transporter | |
| PA14_42760 | -2 | 10 | 1.581453 | chorismate synthase | |
| PA14_42770 | 0 | 12 | 1.215484 | hypothetical protein | |
| PA14_42780 | -1 | 11 | -0.575467 | hypothetical protein | |
| PA14_42790 | -2 | 12 | -1.694227 | N5-glutamine S-adenosyl-L-methionine-dependent | |
| PA14_42820 | -2 | 12 | -2.067635 | isochorismatase family hydrolase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_42750 | TCRTETA | 41 | 4e-06 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_42770 | BACYPHPHTASE | 30 | 0.018 | Salmonella/Yersinia modular tyrosine phosphatase si... | |
>BACYPHPHTASE#Salmonella/Yersinia modular tyrosine phosphatase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_42780 | PF06580 | 28 | 0.049 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_42820 | ISCHRISMTASE | 44 | 9e-08 | Isochorismatase signature. | |
>ISCHRISMTASE#Isochorismatase signature. | |||||
| 112 | PA14_45540 | PA14_45940 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_45540 | 2 | 12 | -0.787906 | flagellar motor protein MotD | |
| PA14_45560 | 1 | 12 | -0.917299 | flagellar motor protein | |
| PA14_45580 | 1 | 11 | -1.216679 | chemotaxis-specific methylesterase | |
| PA14_45590 | 0 | 11 | -0.950707 | two-component sensor | |
| PA14_45610 | 0 | 9 | -1.371848 | chemotaxis protein CheZ | |
| PA14_45620 | 0 | 12 | -0.252626 | two-component response regulator CheY | |
| PA14_45630 | 0 | 15 | 0.403283 | flagellar biosynthesis sigma factor | |
| PA14_45640 | 0 | 15 | 0.683002 | flagellar synthesis regulator FleN | |
| PA14_45660 | 2 | 16 | 0.892028 | flagellar biosynthesis regulator FlhF | |
| PA14_45680 | 3 | 17 | 0.512164 | flagellar biosynthesis protein FlhA | |
| PA14_45700 | 3 | 20 | 0.554693 | hypothetical protein | |
| PA14_45710 | 5 | 19 | 0.476205 | hypothetical protein | |
| PA14_45720 | 7 | 20 | -0.097947 | flagellar biosynthesis protein FlhB | |
| PA14_45740 | 6 | 20 | -0.844980 | flagellar biosynthesis protein FliR | |
| PA14_45760 | 4 | 17 | -1.495760 | flagellar biosynthesis protein FliQ | |
| PA14_45770 | 0 | 12 | -0.274983 | flagellar biosynthesis protein FliP | |
| PA14_45780 | 0 | 10 | 0.026898 | flagellar protein FliO | |
| PA14_45790 | 0 | 9 | -0.582193 | flagellar motor switch protein | |
| PA14_45800 | -1 | 11 | 0.360400 | flagellar motor switch protein FliM | |
| PA14_45810 | 0 | 12 | 0.699176 | flagellar basal body-associated protein FliL | |
| PA14_45830 | -1 | 12 | 1.142352 | hypothetical protein | |
| PA14_45840 | 0 | 14 | 1.287706 | hypothetical protein | |
| PA14_45850 | 0 | 13 | 1.594059 | hypothetical protein | |
| PA14_45870 | 0 | 11 | 1.819684 | two-component sensor | |
| PA14_45880 | -1 | 10 | 0.767782 | two-component response regulator | |
| PA14_45890 | -2 | 9 | 0.530932 | RND efflux transporter | |
| PA14_45910 | -1 | 12 | -0.771722 | RND efflux membrane fusion protein | |
| PA14_45920 | -2 | 9 | -0.151834 | hypothetical protein | |
| PA14_45930 | -2 | 10 | -0.432725 | hypothetical protein | |
| PA14_45940 | -2 | 15 | -1.456494 | autoinducer synthesis protein LasI |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_45540 | OMPADOMAIN | 69 | 1e-15 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_45580 | HTHFIS | 59 | 9e-12 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_45590 | PF06580 | 42 | 8e-06 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_45620 | HTHFIS | 90 | 2e-24 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_45700 | cloacin | 33 | 0.003 | Cloacin signature. | |
>cloacin#Cloacin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_45710 | cloacin | 36 | 2e-04 | Cloacin signature. | |
>cloacin#Cloacin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_45720 | TYPE3IMSPROT | 336 | e-116 | Type III secretion system inner membrane S protein ... | |
>TYPE3IMSPROT#Type III secretion system inner membrane S protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_45740 | TYPE3IMRPROT | 135 | 7e-41 | Type III secretion system inner membrane R protein ... | |
>TYPE3IMRPROT#Type III secretion system inner membrane R protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_45760 | TYPE3IMQPROT | 55 | 9e-14 | Type III secretion system inner membrane Q protein ... | |
>TYPE3IMQPROT#Type III secretion system inner membrane Q protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_45770 | FLGBIOSNFLIP | 264 | 2e-91 | Escherichia coli: Flagellar biosynthetic protein Fl... | |
>FLGBIOSNFLIP#Escherichia coli: Flagellar biosynthetic protein FliP | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_45790 | FLGMOTORFLIN | 120 | 8e-38 | Flagellar motor switch protein FliN signature. | |
>FLGMOTORFLIN#Flagellar motor switch protein FliN signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_45800 | FLGMOTORFLIM | 259 | 2e-87 | Flagellar motor switch protein FliM signature. | |
>FLGMOTORFLIM#Flagellar motor switch protein FliM signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_45830 | FLGHOOKFLIK | 51 | 6e-09 | Flagellar hook-length control protein signature. | |
>FLGHOOKFLIK#Flagellar hook-length control protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_45870 | PF06580 | 29 | 0.035 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_45880 | HTHFIS | 86 | 1e-21 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_45890 | ACRIFLAVINRP | 762 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_45910 | RTXTOXIND | 50 | 6e-09 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_45940 | AUTOINDCRSYN | 153 | 5e-49 | Autoinducer synthesis protein signature. | |
>AUTOINDCRSYN#Autoinducer synthesis protein signature. | |||||
| 113 | PA14_46290 | PA14_46440 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_46290 | 0 | 10 | 3.246894 | TetR family transcriptional regulator | |
| PA14_46300 | 1 | 11 | 3.230915 | hypothetical protein | |
| PA14_46310 | 1 | 11 | 2.990617 | hypothetical protein | |
| PA14_46320 | 0 | 11 | 2.723564 | pyruvate carboxylase | |
| PA14_46330 | 1 | 13 | 1.870972 | transcriptional regulator | |
| PA14_46340 | 2 | 16 | 1.517912 | hypothetical protein | |
| PA14_46360 | 2 | 14 | 1.756680 | two-component response regulator | |
| PA14_46370 | 1 | 15 | 1.295153 | two-component sensor | |
| PA14_46380 | 1 | 13 | 0.964352 | hypothetical protein | |
| PA14_46390 | -2 | 15 | 0.344898 | hypothetical protein | |
| PA14_46400 | -2 | 17 | -3.614419 | transcriptional regulator | |
| PA14_46420 | -1 | 13 | -2.701324 | short chain dehydrogenase | |
| PA14_46430 | -1 | 16 | -3.213153 | hypothetical protein | |
| PA14_46440 | -1 | 13 | -1.601011 | acetyltransferase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_46290 | HTHTETR | 58 | 1e-12 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_46320 | RTXTOXIND | 35 | 0.002 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_46360 | HTHFIS | 57 | 6e-12 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_46370 | HTHFIS | 50 | 2e-08 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_46420 | DHBDHDRGNASE | 110 | 3e-31 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_46440 | SACTRNSFRASE | 37 | 9e-06 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| 114 | PA14_46520 | PA14_46600 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_46520 | 2 | 40 | -9.363472 | hypothetical protein | |
| PA14_46530 | 0 | 36 | -7.484197 | hypothetical protein | |
| PA14_46540 | -2 | 22 | -5.398917 | hypothetical protein | |
| PA14_46550 | -2 | 16 | -3.387793 | ribonuclease | |
| PA14_46560 | -1 | 14 | -2.142898 | outer membrane protein | |
| PA14_46570 | -1 | 19 | -3.271852 | transcriptional regulator | |
| PA14_46580 | -1 | 20 | -2.764132 | multidrug efflux gene product | |
| PA14_46590 | -2 | 13 | -2.402442 | AcrB/AcrD/AcrF family protein | |
| PA14_46600 | -1 | 15 | -1.509359 | short chain dehydrogenase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_46520 | BACINVASINB | 29 | 0.027 | Salmonella/Shigella invasin protein B signature. | |
>BACINVASINB#Salmonella/Shigella invasin protein B signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_46570 | HTHTETR | 60 | 2e-13 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_46580 | RTXTOXIND | 43 | 1e-06 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_46590 | ACRIFLAVINRP | 431 | e-137 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_46600 | DHBDHDRGNASE | 101 | 8e-28 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| 115 | PA14_48040 | PA14_48350 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_48040 | -1 | 11 | 1.153788 | alkaline proteinase inhibitor AprI | |
| PA14_48060 | -2 | 10 | 0.965271 | alkaline metalloproteinase | |
| PA14_48090 | -2 | 10 | 2.071617 | alkaline protease secretion outer membrane | |
| PA14_48100 | -2 | 9 | 2.497429 | alkaline protease secretion protein AprE | |
| PA14_48115 | -1 | 9 | 2.440610 | alkaline protease secretion protein AprD | |
| PA14_48140 | 0 | 9 | 2.200773 | hypothetical protein | |
| PA14_48150 | -1 | 9 | 2.544375 | hypothetical protein | |
| PA14_48160 | 0 | 10 | 2.838772 | sensor/response regulator hybrid | |
| PA14_48170 | 0 | 9 | 4.309155 | hypothetical protein | |
| PA14_48190 | 2 | 10 | 5.124370 | transcriptional regulator | |
| PA14_48200 | 2 | 10 | 4.664295 | enoyl-CoA hydratase | |
| PA14_48210 | 2 | 10 | 4.710828 | hydrolase | |
| PA14_48230 | 2 | 11 | 4.418402 | hypothetical protein | |
| PA14_48240 | 1 | 10 | 4.201244 | outer membrane component of multidrug efflux | |
| PA14_48280 | 1 | 13 | 3.251934 | multidrug resistance efflux pump | |
| PA14_48300 | 0 | 14 | 2.561226 | MFS transporter | |
| PA14_48310 | 0 | 16 | 2.667237 | transcriptional regulator | |
| PA14_48320 | 0 | 13 | 2.631173 | hypothetical protein | |
| PA14_48330 | 0 | 12 | 3.012769 | hypothetical protein | |
| PA14_48340 | 1 | 13 | 3.395026 | hypothetical protein | |
| PA14_48350 | 0 | 12 | 3.319762 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_48040 | MPTASEINHBTR | 129 | 5e-42 | Metalloprotease inhibitor signature. | |
>MPTASEINHBTR#Metalloprotease inhibitor signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_48060 | CABNDNGRPT | 419 | e-145 | NodO calcium binding signature. | |
>CABNDNGRPT#NodO calcium binding signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_48100 | RTXTOXIND | 439 | e-154 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_48160 | HTHFIS | 81 | 4e-18 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_48170 | SUBTILISIN | 89 | 2e-21 | Subtilisin serine protease family (S8) signature. | |
>SUBTILISIN#Subtilisin serine protease family (S8) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_48190 | HTHTETR | 60 | 1e-13 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_48280 | RTXTOXIND | 123 | 3e-33 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_48300 | TCRTETB | 109 | 7e-28 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_48310 | HTHFIS | 34 | 6e-04 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_48350 | RTXTOXIND | 65 | 5e-14 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| 116 | PA14_49340 | PA14_49440 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_49340 | -1 | 15 | 3.105353 | protein Pcprotein PS | |
| PA14_49350 | -1 | 15 | 2.308901 | hypothetical protein | |
| PA14_49360 | -1 | 12 | 2.217078 | glucosyl transferase | |
| PA14_49380 | 0 | 12 | 2.388066 | succinyl-diaminopimelate desuccinylase | |
| PA14_49390 | 0 | 17 | 0.580707 | rRNA methyltransferase | |
| PA14_49400 | 0 | 18 | -0.825819 | hypothetical protein | |
| PA14_49410 | 0 | 19 | -6.855940 | cold-shock protein | |
| PA14_49420 | 0 | 18 | -6.203755 | two-component sensor | |
| PA14_49440 | 1 | 25 | -8.768823 | two-component response regulator |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_49340 | ENTSNTHTASED | 89 | 2e-23 | Enterobactin synthetase component D signature. | |
>ENTSNTHTASED#Enterobactin synthetase component D signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_49350 | ISCHRISMTASE | 30 | 0.009 | Isochorismatase signature. | |
>ISCHRISMTASE#Isochorismatase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_49360 | PF05704 | 31 | 0.023 | Capsular polysaccharide synthesis protein | |
>PF05704#Capsular polysaccharide synthesis protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_49420 | PF06580 | 42 | 4e-06 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_49440 | HTHFIS | 79 | 3e-19 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 117 | PA14_50050 | PA14_50470 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_50050 | -1 | 8 | 1.562032 | MFS family transporter | |
| PA14_50060 | 0 | 10 | 0.036443 | hypothetical protein | |
| PA14_50070 | 1 | 11 | 0.366771 | hypothetical protein | |
| PA14_50080 | 0 | 10 | 0.112528 | flagellar biosynthesis chaperone | |
| PA14_50100 | 1 | 9 | 0.579592 | flagellum-specific ATP synthase | |
| PA14_50110 | -1 | 9 | 0.507021 | flagellar assembly protein H | |
| PA14_50130 | -1 | 9 | 0.230265 | flagellar motor switch protein G | |
| PA14_50140 | -1 | 10 | 0.329482 | flagellar MS-ring protein | |
| PA14_50160 | 1 | 12 | -0.213503 | flagellar hook-basal body protein FliE | |
| PA14_50180 | -1 | 12 | -1.106501 | two-component response regulator | |
| PA14_50200 | 0 | 13 | -2.443823 | two-component sensor | |
| PA14_50220 | -1 | 15 | -3.853734 | transcriptional regulator FleQ | |
| PA14_50240 | -1 | 14 | -1.105623 | hypothetical protein | |
| PA14_50250 | -1 | 13 | -1.093678 | flagellar protein FliS | |
| PA14_50270 | 0 | 12 | -0.949454 | flagellar capping protein FliD | |
| PA14_50280 | -1 | 13 | -0.375504 | hypothetical protein | |
| PA14_50290 | -1 | 11 | -0.616263 | flagellin type B | |
| PA14_50300 | -1 | 11 | -0.376613 | hypothetical protein | |
| PA14_50310 | -1 | 8 | -1.873102 | sugar nucleotidyltransferase | |
| PA14_50320 | -1 | 8 | -1.302272 | hypothetical protein | |
| PA14_50330 | -1 | 9 | -1.106609 | hypothetical protein | |
| PA14_50340 | 0 | 11 | -1.103750 | flagellar hook-associated protein FlgL | |
| PA14_50360 | 0 | 12 | -0.677062 | flagellar hook-associated protein FlgK | |
| PA14_50380 | 1 | 15 | -0.724483 | flagellar rod assembly protein/muramidase FlgJ | |
| PA14_50410 | 2 | 15 | -1.519844 | flagellar basal body P-ring protein | |
| PA14_50420 | 3 | 15 | -2.346429 | flagellar basal body L-ring protein | |
| PA14_50430 | 3 | 15 | -2.815015 | flagellar basal body rod protein FlgG | |
| PA14_50440 | 1 | 13 | -3.032454 | flagellar basal body rod protein FlgF | |
| PA14_50450 | 2 | 13 | -3.005172 | flagellar hook protein FlgE | |
| PA14_50460 | 1 | 15 | -3.342347 | flagellar basal body rod modification protein | |
| PA14_50470 | 0 | 14 | -3.300725 | flagellar basal body rod protein FlgC |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_50050 | TCRTETA | 54 | 2e-10 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_50080 | FLGFLIJ | 54 | 2e-12 | Flagellar FliJ protein signature. | |
>FLGFLIJ#Flagellar FliJ protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_50110 | FLGFLIH | 57 | 8e-12 | Flagellar assembly protein FliH signature. | |
>FLGFLIH#Flagellar assembly protein FliH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_50130 | FLGMOTORFLIG | 305 | e-105 | Flagellar motor switch protein FliG signature. | |
>FLGMOTORFLIG#Flagellar motor switch protein FliG signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_50140 | FLGMRINGFLIF | 608 | 0.0 | Flagellar M-ring protein signature. | |
>FLGMRINGFLIF#Flagellar M-ring protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_50160 | FLGHOOKFLIE | 92 | 9e-28 | Flagellar hook-basal body complex protein FliE signa... | |
>FLGHOOKFLIE#Flagellar hook-basal body complex protein FliE | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_50180 | HTHFIS | 504 | e-179 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_50200 | PF06580 | 37 | 1e-04 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_50220 | HTHFIS | 510 | 0.0 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_50290 | FLAGELLIN | 204 | 9e-62 | Flagellin signature. | |
>FLAGELLIN#Flagellin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_50340 | FLAGELLIN | 52 | 2e-09 | Flagellin signature. | |
>FLAGELLIN#Flagellin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_50360 | FLGHOOKAP1 | 249 | 2e-76 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_50380 | FLGFLGJ | 148 | 1e-43 | Flagellar protein FlgJ signature. | |
>FLGFLGJ#Flagellar protein FlgJ signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_50410 | FLGPRINGFLGI | 436 | e-155 | Flagellar P-ring protein signature. | |
>FLGPRINGFLGI#Flagellar P-ring protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_50420 | FLGLRINGFLGH | 181 | 2e-59 | Flagellar L-ring protein signature. | |
>FLGLRINGFLGH#Flagellar L-ring protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_50430 | FLGHOOKAP1 | 45 | 2e-07 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_50450 | FLGHOOKAP1 | 45 | 5e-07 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_50470 | FLGHOOKAP1 | 36 | 3e-05 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
| 118 | PA14_51680 | PA14_51750 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_51680 | 2 | 20 | -4.773091 | radical activating enzyme | |
| PA14_51690 | 1 | 20 | -4.367340 | hypothetical protein | |
| PA14_51710 | 1 | 20 | -4.830885 | peptidoglycan associated lipoprotein OprL | |
| PA14_51720 | 1 | 19 | -4.685037 | translocation protein TolB | |
| PA14_51730 | 1 | 23 | -5.004548 | TolA protein | |
| PA14_51740 | 1 | 22 | -4.280183 | TolR protein | |
| PA14_51750 | 2 | 20 | -3.880077 | TolQ protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_51680 | TYPE3OMBPROT | 29 | 0.023 | Type III secretion system outer membrane B protein ... | |
>TYPE3OMBPROT#Type III secretion system outer membrane B protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_51690 | RTXTOXIND | 32 | 0.002 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_51710 | OMPADOMAIN | 116 | 6e-34 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_51730 | IGASERPTASE | 49 | 2e-08 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_51750 | 60KDINNERMP | 29 | 0.017 | 60kDa inner membrane protein signature. | |
>60KDINNERMP#60kDa inner membrane protein signature. | |||||
| 119 | PA14_55430 | PA14_55530 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_55430 | 1 | 10 | 3.920500 | type II secretion system protein | |
| PA14_55440 | 0 | 11 | 3.431961 | type II secretion system protein | |
| PA14_55450 | -1 | 11 | 3.249057 | type II secretion system protein | |
| PA14_55460 | 1 | 17 | 3.611010 | type II secretion system protein | |
| PA14_55470 | 1 | 14 | 3.756808 | type II secretion system protein | |
| PA14_55480 | 2 | 16 | 3.065624 | type II secretion system protein | |
| PA14_55490 | 2 | 14 | 3.222744 | HxcT pseudopilin | |
| PA14_55500 | 0 | 14 | 2.654863 | HxcV pseudopilin | |
| PA14_55510 | 0 | 16 | 2.843184 | hypothetical protein | |
| PA14_55520 | 0 | 16 | 2.305129 | type II secretion system protein | |
| PA14_55530 | 0 | 13 | 1.782795 | type II secretion system protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_55430 | BCTERIALGSPF | 379 | e-132 | Bacterial general secretion pathway protein F signa... | |
>BCTERIALGSPF#Bacterial general secretion pathway protein F | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_55450 | BCTERIALGSPD | 346 | e-111 | Bacterial general secretion pathway protein D signa... | |
>BCTERIALGSPD#Bacterial general secretion pathway protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_55490 | BCTERIALGSPG | 167 | 1e-56 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_55500 | BCTERIALGSPG | 31 | 6e-04 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_55520 | BCTERIALGSPH | 50 | 2e-10 | Bacterial general secretion pathway protein H signa... | |
>BCTERIALGSPH#Bacterial general secretion pathway protein H | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_55530 | BCTERIALGSPG | 32 | 6e-04 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
| 120 | PA14_55900 | PA14_56010 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_55900 | -2 | 7 | 0.840742 | hypothetical protein | |
| PA14_55920 | -1 | 7 | 0.021668 | type II secretion system protein | |
| PA14_55930 | -1 | 10 | -0.385236 | pilus assembly protein | |
| PA14_55940 | -1 | 11 | -0.558545 | hypothetical protein | |
| PA14_55960 | -1 | 11 | -0.164209 | chemotactic transducer PctC | |
| PA14_55980 | -1 | 10 | 0.115427 | hypothetical protein | |
| PA14_56000 | 0 | 12 | -0.878292 | chemotactic transducer PctA | |
| PA14_56010 | -1 | 11 | -1.236452 | chemotactic transducer PctB |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_55900 | HTHFIS | 32 | 0.003 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_55920 | BCTERIALGSPD | 146 | 1e-40 | Bacterial general secretion pathway protein D signa... | |
>BCTERIALGSPD#Bacterial general secretion pathway protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_55960 | RTXTOXINA | 30 | 0.034 | Gram-negative bacterial RTX toxin determinant A family... | |
>RTXTOXINA#Gram-negative bacterial RTX toxin determinant A family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_56000 | RTXTOXINA | 31 | 0.018 | Gram-negative bacterial RTX toxin determinant A family... | |
>RTXTOXINA#Gram-negative bacterial RTX toxin determinant A family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_56010 | RTXTOXINA | 31 | 0.022 | Gram-negative bacterial RTX toxin determinant A family... | |
>RTXTOXINA#Gram-negative bacterial RTX toxin determinant A family | |||||
| 121 | PA14_57680 | PA14_57760 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_57680 | -1 | 10 | -1.554710 | hypothetical protein | |
| PA14_57690 | 0 | 9 | -1.427230 | hypothetical protein | |
| PA14_57710 | 1 | 9 | -1.757909 | bifunctional sulfate adenylyltransferase subunit | |
| PA14_57720 | 2 | 10 | -1.232089 | sulfate adenylyltransferase subunit 2 | |
| PA14_57730 | 3 | 10 | -0.550245 | murein hydrolase B | |
| PA14_57740 | 4 | 12 | -0.606894 | hypothetical protein | |
| PA14_57760 | 4 | 12 | -0.920347 | AlgW protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_57680 | FLAGELLIN | 31 | 0.003 | Flagellin signature. | |
>FLAGELLIN#Flagellin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_57710 | TCRTETOQM | 68 | 5e-14 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_57720 | TCRTETOQM | 28 | 0.046 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_57760 | V8PROTEASE | 60 | 2e-12 | V8 serine protease family signature. | |
>V8PROTEASE#V8 serine protease family signature. | |||||
| 122 | PA14_58730 | PA14_58900 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_58730 | 2 | 32 | -8.495270 | type IV pilin structural subunit | |
| PA14_58740 | 1 | 26 | -7.780206 | hypothetical protein | |
| PA14_58750 | 1 | 26 | -7.537675 | type 4 fimbrial biogenesis protein PilB | |
| PA14_58760 | 2 | 25 | -6.131806 | type 4 fimbrial biogenesis protein pilC | |
| PA14_58770 | 2 | 15 | -0.972286 | type 4 prepilin peptidase PilD | |
| PA14_58780 | 0 | 16 | -0.559140 | dephospho-CoA kinase | |
| PA14_58790 | 1 | 18 | -0.785351 | zinc-binding protein | |
| PA14_58800 | 0 | 16 | -0.391660 | hypothetical protein | |
| PA14_58810 | 0 | 15 | -0.146918 | hypothetical protein | |
| PA14_58820 | -4 | 12 | 0.094596 | hypothetical protein | |
| PA14_58830 | -2 | 14 | -0.546960 | hypothetical protein | |
| PA14_58840 | -1 | 14 | -0.555141 | hypothetical protein | |
| PA14_58850 | -1 | 17 | -0.746287 | hypothetical protein | |
| PA14_58860 | 0 | 20 | -1.474491 | hypothetical protein | |
| PA14_58870 | -1 | 21 | -2.031082 | NADH dehydrogenase | |
| PA14_58880 | 0 | 24 | -2.600356 | ATPase | |
| PA14_58890 | 0 | 24 | -2.651242 | hemolysin activation/secretion protein | |
| PA14_58900 | -1 | 26 | -3.138993 | large exoprotein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_58730 | BCTERIALGSPG | 43 | 6e-08 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_58760 | BCTERIALGSPF | 433 | e-153 | Bacterial general secretion pathway protein F signa... | |
>BCTERIALGSPF#Bacterial general secretion pathway protein F | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_58770 | PREPILNPTASE | 352 | e-125 | Type IV prepilin cysteine protease (C20) family sig... | |
>PREPILNPTASE#Type IV prepilin cysteine protease (C20) family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_58780 | DHBDHDRGNASE | 30 | 0.005 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_58830 | SACTRNSFRASE | 28 | 0.013 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_58850 | 2FE2SRDCTASE | 27 | 0.040 | Ferric iron reductase signature. | |
>2FE2SRDCTASE#Ferric iron reductase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_58890 | PF00577 | 38 | 2e-04 | Outer membrane usher protein FimD | |
>PF00577#Outer membrane usher protein FimD | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_58900 | PF05860 | 66 | 8e-15 | haemagglutination activity domain. | |
>PF05860#haemagglutination activity domain. | |||||
| 123 | PA14_59210 | PA14_59350 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_59210 | 2 | 31 | -7.048620 | DNA helicase | |
| PA14_59220 | 4 | 34 | -7.480794 | pyocin S5 | |
| PA14_59230 | 0 | 20 | -3.697734 | colicin immunity protein | |
| PA14_59240 | 3 | 17 | -2.476679 | type IV B pilus protein | |
| PA14_59250 | 2 | 18 | -3.122581 | Type IV B pilus protein | |
| PA14_59270 | 2 | 17 | -2.788496 | type IV b pilus protein | |
| PA14_59280 | 1 | 16 | -3.004002 | type IV B pilus protein | |
| PA14_59290 | 1 | 16 | -3.201279 | type IV B pilus protein | |
| PA14_59310 | 1 | 22 | -3.455043 | type IV B pilus protein | |
| PA14_59320 | 0 | 28 | -4.363138 | type IV B pilus protein | |
| PA14_59340 | 0 | 30 | -4.320674 | type IV B pilus protein | |
| PA14_59350 | 2 | 36 | -5.808182 | Type IV B pilus protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_59210 | SALSPVBPROT | 30 | 0.027 | Salmonella virulence plasmid 65kDa B protein signature. | |
>SALSPVBPROT#Salmonella virulence plasmid 65kDa B protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_59220 | CHANLCOLICIN | 162 | 2e-46 | Channel forming colicin signature. | |
>CHANLCOLICIN#Channel forming colicin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_59240 | IGASERPTASE | 37 | 2e-04 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_59250 | BCTERIALGSPD | 87 | 7e-20 | Bacterial general secretion pathway protein D signa... | |
>BCTERIALGSPD#Bacterial general secretion pathway protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_59310 | BCTERIALGSPF | 71 | 6e-16 | Bacterial general secretion pathway protein F signa... | |
>BCTERIALGSPF#Bacterial general secretion pathway protein F | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_59320 | PilS_PF08805 | 117 | 8e-36 | PilS N terminal | |
>PilS_PF08805#PilS N terminal | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_59350 | BCTERIALGSPG | 37 | 3e-05 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
| 124 | PA14_59770 | PA14_59800 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_59770 | -1 | 30 | -6.145483 | two component response regulator | |
| PA14_59780 | 0 | 35 | -7.542506 | kinase sensor protein | |
| PA14_59790 | 0 | 40 | -9.403732 | two component response regulator | |
| PA14_59800 | 1 | 40 | -9.701327 | kinase sensor protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_59770 | HTHFIS | 51 | 1e-09 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_59780 | HTHFIS | 70 | 2e-14 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_59790 | HTHFIS | 66 | 8e-14 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_59800 | HTHFIS | 65 | 6e-13 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 125 | PA14_60260 | PA14_60350 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_60260 | 1 | 35 | -8.058938 | two-component response regulator PilR | |
| PA14_60270 | 2 | 44 | -10.071860 | glycine/D-amino acid oxidases | |
| PA14_60280 | 2 | 42 | -10.747822 | type 4 fimbrial biogenesis protein FimU | |
| PA14_60290 | 2 | 39 | -10.182655 | type 4 fimbrial biogenesis protein PilW | |
| PA14_60300 | 2 | 33 | -9.410307 | type 4 fimbrial biogenesis protein PilX | |
| PA14_60310 | 1 | 21 | -7.018934 | type 4 fimbrial biogenesis protein PilY1 | |
| PA14_60320 | -1 | 10 | -2.878591 | type 4 fimbrial biogenesis protein PilE | |
| PA14_60330 | -1 | 9 | -2.042801 | 4-hydroxy-3-methylbut-2-enyl diphosphate | |
| PA14_60350 | -1 | 10 | -2.210711 | peptidyl-prolyl cis-trans isomerase, FkbP-type |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_60260 | HTHFIS | 525 | 0.0 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_60280 | BCTERIALGSPG | 44 | 1e-08 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_60300 | BCTERIALGSPG | 29 | 0.009 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_60320 | BCTERIALGSPG | 50 | 1e-10 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_60330 | PF06704 | 28 | 0.033 | DspF/AvrF protein | |
>PF06704#DspF/AvrF protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_60350 | INFPOTNTIATR | 34 | 1e-04 | Macrophage infectivity potentiator signature. | |
>INFPOTNTIATR#Macrophage infectivity potentiator signature. | |||||
| 126 | PA14_60730 | PA14_60860 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_60730 | -1 | 10 | 0.774666 | outer membrane protein | |
| PA14_60750 | -1 | 7 | 0.630376 | protein activator | |
| PA14_60760 | -1 | 8 | 0.904883 | hypothetical protein | |
| PA14_60770 | -1 | 7 | 1.049792 | outer membrane protein | |
| PA14_60780 | -2 | 8 | 0.546262 | ABC transporter permease | |
| PA14_60790 | -2 | 9 | 0.711705 | ABC transporter ATP-binding protein | |
| PA14_60800 | -3 | 9 | 0.313145 | ABC transporter ATP-binding protein | |
| PA14_60810 | -1 | 7 | 0.976252 | transcriptional regulator NfxB | |
| PA14_60820 | -2 | 8 | 0.831936 | outer membrane protein OprJ | |
| PA14_60830 | -1 | 9 | 0.622362 | multidrug efflux RND transporter MexD | |
| PA14_60850 | 0 | 10 | 0.908005 | multidrug efflux RND membrane fusion protein | |
| PA14_60860 | 1 | 13 | 0.309025 | transcriptional regulator NfxB |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_60730 | OMADHESIN | 31 | 0.007 | Yersinia outer membrane adhesin signature. | |
>OMADHESIN#Yersinia outer membrane adhesin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_60760 | RTXTOXIND | 57 | 7e-11 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_60780 | PF05844 | 29 | 0.036 | YopD protein | |
>PF05844#YopD protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_60810 | HTHTETR | 35 | 5e-05 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_60830 | ACRIFLAVINRP | 1169 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_60850 | RTXTOXIND | 43 | 2e-06 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_60860 | HTHTETR | 37 | 2e-05 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| 127 | PA14_63150 | PA14_63210 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_63150 | 1 | 9 | 1.941559 | two-component response regulator | |
| PA14_63160 | 0 | 9 | 1.727964 | PmrB: two-component regulator system signal | |
| PA14_63170 | -1 | 10 | 1.944444 | transcriptional regulator | |
| PA14_63190 | -1 | 10 | 2.064314 | hypothetical protein | |
| PA14_63200 | -3 | 11 | 1.824405 | hypothetical protein | |
| PA14_63210 | -2 | 13 | 2.532838 | two-component response regulator |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_63150 | HTHFIS | 80 | 1e-19 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_63160 | PF06580 | 34 | 0.002 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_63170 | PF07675 | 30 | 0.002 | Cleaved Adhesin | |
>PF07675#Cleaved Adhesin | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_63200 | IGASERPTASE | 31 | 0.008 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_63210 | HTHFIS | 74 | 2e-16 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 128 | PA14_64310 | PA14_64390 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_64310 | 0 | 18 | 3.397710 | ABC transporter ATP-binding protein | |
| PA14_64320 | 2 | 21 | 2.898889 | hypothetical protein | |
| PA14_64335 | 1 | 17 | 1.996862 | urease accessory protein | |
| PA14_64350 | 2 | 15 | 0.906391 | urease subunit gamma | |
| PA14_64360 | 0 | 13 | 1.714516 | hypothetical protein | |
| PA14_64370 | -1 | 13 | 2.141711 | urease subunit beta | |
| PA14_64390 | 0 | 11 | 1.855189 | urease subunit alpha |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_64310 | PF05272 | 28 | 0.045 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_64320 | SACTRNSFRASE | 36 | 1e-05 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_64360 | SACTRNSFRASE | 42 | 2e-07 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_64390 | UREASE | 1097 | 0.0 | Urea amidohydrolase (urease) protein signature. | |
>UREASE#Urea amidohydrolase (urease) protein signature. | |||||
| 129 | PA14_66580 | PA14_66660 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_66580 | 0 | 18 | -4.137453 | hypothetical protein | |
| PA14_66600 | 1 | 20 | -5.992862 | 3-dehydroquinate synthase | |
| PA14_66610 | 2 | 19 | -6.165129 | shikimate kinase | |
| PA14_66620 | 1 | 13 | -5.376682 | type 4 fimbrial biogenesis outer membrane | |
| PA14_66630 | 0 | 11 | -4.327718 | type 4 fimbrial biogenesis protein PilP | |
| PA14_66640 | -1 | 9 | -3.198923 | type 4 fimbrial biogenesis protein PilO | |
| PA14_66650 | 0 | 9 | -2.276014 | type 4 fimbrial biogenesis protein PilN | |
| PA14_66660 | 0 | 11 | -2.161340 | type 4 fimbrial biogenesis protein PilM |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_66580 | PF03544 | 45 | 4e-07 | Gram-negative bacterial tonB protein | |
>PF03544#Gram-negative bacterial tonB protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_66610 | PF05272 | 29 | 0.011 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_66620 | BCTERIALGSPD | 297 | 5e-93 | Bacterial general secretion pathway protein D signa... | |
>BCTERIALGSPD#Bacterial general secretion pathway protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_66660 | SHAPEPROTEIN | 32 | 0.002 | Bacterial cell shape determinant MreB/Mbl protein s... | |
>SHAPEPROTEIN#Bacterial cell shape determinant MreB/Mbl protein | |||||
| 130 | PA14_68120 | PA14_68250 | N ![]() | Y ![]() | Y | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_68120 | -2 | 14 | 0.755324 | outer membrane protein | |
| PA14_68130 | -1 | 15 | -0.187171 | multidrug resistance protein | |
| PA14_68140 | -1 | 13 | 0.043013 | drug efflux transporter | |
| PA14_68170 | -2 | 13 | 0.592784 | *dTDP-D-glucose 4,6-dehydratase | |
| PA14_68190 | -1 | 12 | 0.128413 | dTDP-4-dehydrorhamnose reductase | |
| PA14_68200 | -1 | 14 | -0.379914 | glucose-1-phosphate thymidylyltransferase | |
| PA14_68210 | -1 | 12 | -0.551714 | dTDP-4-dehydrorhamnose 3,5-epimerase | |
| PA14_68230 | 0 | 12 | -0.990439 | two-component sensor | |
| PA14_68250 | 0 | 14 | -1.622489 | two-component response regulator |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_68120 | RTXTOXIND | 34 | 0.001 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_68130 | RTXTOXIND | 77 | 2e-17 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_68140 | TCRTETB | 109 | 6e-28 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_68170 | NUCEPIMERASE | 176 | 9e-55 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_68190 | NUCEPIMERASE | 46 | 9e-08 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_68250 | HTHFIS | 446 | e-156 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 131 | PA14_69020 | PA14_69090 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_69020 | 2 | 9 | -0.109103 | hypothetical protein | |
| PA14_69030 | 1 | 9 | 0.394470 | hypothetical protein | |
| PA14_69040 | 0 | 10 | 0.399446 | 5-formyltetrahydrofolate cyclo-ligase | |
| PA14_69050 | 0 | 8 | 0.246859 | hypothetical protein | |
| PA14_69060 | -1 | 9 | -0.044699 | ABC transporter permease | |
| PA14_69070 | -3 | 8 | 0.370799 | ABC transporter ATP-binding protein/permease | |
| PA14_69090 | -3 | 7 | -0.188677 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_69020 | ALARACEMASE | 26 | 0.048 | Alanine racemase signature. | |
>ALARACEMASE#Alanine racemase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_69060 | ABC2TRNSPORT | 43 | 6e-07 | ABC-2 type transport system membrane protein signat... | |
>ABC2TRNSPORT#ABC-2 type transport system membrane protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_69070 | PF05272 | 32 | 0.013 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_69090 | RTXTOXIND | 81 | 7e-19 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| 132 | PA14_69330 | PA14_69380 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_69330 | 8 | 24 | -1.282152 | hypothetical protein | |
| PA14_69340 | 8 | 24 | -1.003466 | ABC transporter ATP-binding protein | |
| PA14_69350 | 10 | 25 | -0.686119 | hypothetical protein | |
| PA14_69370 | 10 | 22 | -0.332086 | alginate regulatory protein AlgP | |
| PA14_69380 | 4 | 17 | -0.083529 | peptidyl-prolyl cis-trans isomerase, FkbP-type |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_69330 | FLGMRINGFLIF | 27 | 0.047 | Flagellar M-ring protein signature. | |
>FLGMRINGFLIF#Flagellar M-ring protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_69340 | GPOSANCHOR | 31 | 0.013 | Gram-positive coccus surface protein anchor signature. | |
>GPOSANCHOR#Gram-positive coccus surface protein anchor signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_69370 | IGASERPTASE | 59 | 2e-11 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_69380 | INFPOTNTIATR | 100 | 2e-28 | Macrophage infectivity potentiator signature. | |
>INFPOTNTIATR#Macrophage infectivity potentiator signature. | |||||
| 133 | PA14_70280 | PA14_70400 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_70280 | 0 | 9 | -0.850304 | acetylglutamate kinase | |
| PA14_70290 | -1 | 9 | -0.714307 | transcriptional regulator | |
| PA14_70300 | -1 | 10 | -0.554924 | hypothetical protein | |
| PA14_70310 | -3 | 11 | 0.112729 | hypothetical protein | |
| PA14_70330 | -3 | 12 | -1.104899 | oxidoreductase | |
| PA14_70340 | 0 | 12 | -1.813692 | cytochrome c(mono-heme type) | |
| PA14_70350 | -1 | 12 | -1.559271 | hypothetical protein | |
| PA14_70360 | 0 | 12 | -0.628002 | hypothetical protein | |
| PA14_70370 | 0 | 13 | -1.029569 | orotate phosphoribosyltransferase | |
| PA14_70390 | 1 | 14 | -1.248477 | catabolite repression control protein | |
| PA14_70400 | -1 | 16 | -0.738358 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_70280 | CARBMTKINASE | 55 | 8e-11 | Bacterial carbamate kinase signature. | |
>CARBMTKINASE#Bacterial carbamate kinase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_70290 | HTHFIS | 29 | 0.030 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_70310 | ALARACEMASE | 29 | 0.043 | Alanine racemase signature. | |
>ALARACEMASE#Alanine racemase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_70360 | CHANLCOLICIN | 29 | 0.011 | Channel forming colicin signature. | |
>CHANLCOLICIN#Channel forming colicin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_70370 | PF00577 | 28 | 0.041 | Outer membrane usher protein FimD | |
>PF00577#Outer membrane usher protein FimD | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_70400 | ACRIFLAVINRP | 28 | 0.009 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| 134 | PA14_70750 | PA14_70800 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_70750 | 0 | 13 | -0.439225 | two-component response regulator PhoB | |
| PA14_70760 | 0 | 12 | -0.716279 | two-component sensor PhoR | |
| PA14_70770 | -1 | 11 | -1.067163 | hypothetical protein | |
| PA14_70780 | -2 | 10 | -1.058052 | hypothetical protein | |
| PA14_70790 | -1 | 11 | -1.805291 | two-component response regulator | |
| PA14_70800 | -2 | 11 | -2.011188 | phosphate uptake regulatory protein PhoU |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_70750 | HTHFIS | 100 | 2e-26 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_70760 | PF06580 | 38 | 7e-05 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_70790 | HTHFIS | 91 | 8e-23 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_70800 | FLGHOOKAP1 | 28 | 0.031 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
| 135 | PA14_72280 | PA14_72390 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_72280 | 0 | 11 | -1.547823 | citrate transporter | |
| PA14_72300 | 0 | 10 | -1.967815 | hypothetical protein | |
| PA14_72320 | -1 | 11 | -1.581740 | hypothetical protein | |
| PA14_72340 | -1 | 9 | -1.743755 | glutamate/aspartate:proton symporter | |
| PA14_72350 | -2 | 9 | -0.758635 | hypothetical protein | |
| PA14_72360 | -2 | 10 | -0.330417 | hypothetical protein | |
| PA14_72370 | -1 | 9 | 0.614339 | hypothetical protein | |
| PA14_72380 | -2 | 9 | 0.786931 | two-component response regulator AlgB | |
| PA14_72390 | -2 | 9 | 0.255367 | two-component sensor |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_72280 | TCRTETA | 37 | 1e-04 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_72300 | PF07520 | 29 | 0.041 | Virulence protein SrfB | |
>PF07520#Virulence protein SrfB | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_72340 | V8PROTEASE | 32 | 0.007 | V8 serine protease family signature. | |
>V8PROTEASE#V8 serine protease family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_72380 | HTHFIS | 446 | e-157 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_72390 | PF06580 | 53 | 1e-09 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| 136 | PA14_72880 | PA14_72970 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA14_72880 | 1 | 11 | -1.200194 | short-chain dehydrogenase | |
| PA14_72890 | 1 | 11 | -2.452095 | transcriptional regulator | |
| PA14_72900 | 1 | 10 | -2.389839 | lipoprotein | |
| PA14_72920 | 1 | 10 | -1.169767 | hypothetical protein | |
| PA14_72930 | 0 | 9 | -1.110995 | hypothetical protein | |
| PA14_72940 | -1 | 11 | -1.256742 | sodium/proton antiporter | |
| PA14_72960 | -1 | 13 | -0.777989 | MFS dicarboxylate transporter | |
| PA14_72970 | 1 | 17 | 0.223874 | TonB protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_72880 | DHBDHDRGNASE | 104 | 4e-29 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_72940 | RTXTOXINA | 32 | 0.009 | Gram-negative bacterial RTX toxin determinant A family... | |
>RTXTOXINA#Gram-negative bacterial RTX toxin determinant A family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_72960 | TCRTETA | 35 | 6e-04 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA14_72970 | TONBPROTEIN | 112 | 2e-31 | Gram-negative bacterial tonB protein signature. | |
>TONBPROTEIN#Gram-negative bacterial tonB protein signature. | |||||