S.No | Start | End | Bias | Virulence | Insertion elements | Prediction |
1 | SPH_0001 | SPH_0054 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
SPH_0001 | -1 | 16 | -4.826987 | chromosomal replication initiation protein | |
SPH_0002 | 0 | 18 | -4.979358 | DNA polymerase III subunit beta | |
SPH_0003 | 0 | 19 | -4.804830 | hypothetical protein | |
SPH_0004 | 0 | 19 | -4.859103 | GTP-dependent nucleic acid-binding protein EngD | |
SPH_0005 | 0 | 22 | -6.294500 | peptidyl-tRNA hydrolase | |
SPH_0006 | 1 | 23 | -6.277465 | transcription-repair coupling factor | |
SPH_0007 | 2 | 27 | -7.026620 | ribosome-associated heat shock protein | |
SPH_0008 | 0 | 24 | -5.166962 | septum formation initiator | |
SPH_0009 | 0 | 22 | -4.960376 | hypothetical protein | |
SPH_0010 | -1 | 22 | -5.109909 | beta-lactamase class A | |
SPH_0011 | -1 | 19 | -3.329791 | tRNA(Ile)-lysidine synthase | |
SPH_0012 | -1 | 15 | -2.064730 | hypoxanthine phosphoribosyltransferase | |
SPH_0013 | -1 | 14 | -2.373797 | ATP-dependent metallopeptidase HflB | |
SPH_0014 | 0 | 12 | -3.388393 | competence-specific global transcription | |
SPH_0024 | -1 | 13 | -3.353325 | ***hypothetical protein | |
SPH_0025 | -1 | 13 | -3.125194 | adenylosuccinate synthetase | |
SPH_0026 | 1 | 16 | -4.427585 | integrase | |
SPH_0028 | 0 | 23 | -7.038717 | hypothetical protein | |
SPH_0029 | 1 | 19 | -3.709473 | phage transcriptional repressor | |
SPH_0030 | 3 | 16 | -2.970018 | hypothetical protein | |
SPH_0031 | 3 | 14 | -1.936062 | hypothetical protein | |
SPH_0033 | 3 | 16 | -1.454265 | hypothetical protein | |
SPH_0032 | 2 | 15 | -2.058135 | hypothetical protein | |
SPH_0034 | 2 | 17 | -0.169888 | hypothetical protein | |
SPH_0035 | 0 | 17 | -2.358486 | phage protein | |
SPH_0036 | 0 | 20 | -1.350829 | hypothetical protein | |
SPH_0037 | 1 | 21 | -1.931921 | hypothetical protein | |
SPH_0038 | 2 | 23 | -1.913747 | hypothetical protein | |
SPH_0039 | 1 | 25 | -1.509648 | hypothetical protein | |
SPH_0040 | 1 | 23 | -2.086454 | hypothetical protein | |
SPH_0041 | 2 | 26 | -2.352471 | hypothetical protein | |
SPH_0042 | 5 | 25 | -3.989643 | hypothetical protein | |
SPH_0043 | 4 | 23 | -4.900944 | hypothetical protein | |
SPH_0044 | 3 | 18 | -3.262524 | hypothetical protein | |
SPH_0045 | 2 | 18 | -3.324324 | hypothetical protein | |
SPH_0046 | 1 | 16 | -2.706954 | prophage LambdaSa2, site-specific recombinase | |
SPH_0047 | 2 | 13 | -2.427591 | HNH endonuclease domain-containing protein | |
SPH_0048 | 2 | 12 | -2.520298 | hypothetical protein | |
SPH_0049 | 3 | 12 | -2.298840 | phage terminase, large subunit | |
SPH_0050 | 2 | 15 | -3.194749 | hypothetical protein | |
SPH_0051 | 3 | 17 | -3.109744 | HK97 family phage prohead protease | |
SPH_0052 | 3 | 21 | -3.607899 | hypothetical protein | |
SPH_0053 | 3 | 20 | -3.592571 | hypothetical protein | |
SPH_0054 | 4 | 20 | -3.038811 | phage head-tail adaptor |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_0013 | HTHFIS | 36 | 6e-04 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_0035 | SECA | 28 | 0.006 | SecA protein signature. | |
>SECA#SecA protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_0036 | cloacin | 26 | 0.035 | Cloacin signature. | |
>cloacin#Cloacin signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_0043 | SECA | 24 | 0.040 | SecA protein signature. | |
>SECA#SecA protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_0048 | HTHFIS | 28 | 0.017 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. |
2 | SPH_0068 | SPH_0101 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
SPH_0068 | -1 | 26 | -4.599382 | hypothetical protein | |
SPH_0069 | -1 | 26 | -4.869594 | tRNA-specific adenosine deaminase | |
SPH_0070 | -1 | 23 | -4.084316 | integrase | |
SPH_0071 | 0 | 18 | -2.510878 | hypothetical protein | |
SPH_0072 | 1 | 20 | -1.928905 | hypothetical protein | |
SPH_0073 | 2 | 18 | -2.225724 | repressor protein | |
SPH_0074 | 0 | 21 | -2.466185 | repressor | |
SPH_0075 | 0 | 19 | -1.299799 | phage antirepressor protein | |
SPH_0076 | 2 | 23 | -2.897802 | phage replication protein | |
SPH_0077 | 2 | 21 | -2.066055 | hypothetical protein | |
SPH_0078 | -1 | 21 | -1.709471 | hypothetical protein | |
SPH_0079 | -1 | 22 | -0.846945 | Erf protein | |
SPH_0080 | -1 | 21 | -0.194696 | hypothetical protein | |
SPH_0081 | -1 | 26 | -1.258046 | hypothetical protein | |
SPH_0082 | 0 | 27 | -0.757179 | single-stranded DNA-binding protein (SSB) | |
SPH_0083 | 1 | 30 | -1.613215 | hypothetical protein | |
SPH_0084 | 5 | 35 | -2.444583 | hypothetical protein | |
SPH_0085 | 5 | 34 | -3.835089 | hypothetical protein | |
SPH_0086 | 2 | 31 | -3.051448 | hypothetical protein | |
SPH_0087 | 0 | 26 | -2.900390 | hypothetical protein | |
SPH_0088 | 0 | 26 | -4.832975 | hypothetical protein | |
SPH_0089 | 3 | 28 | -5.066760 | RUS | |
SPH_0090 | 2 | 30 | -4.652372 | hypothetical protein | |
SPH_0091 | 2 | 28 | -3.876200 | hypothetical protein | |
SPH_0092 | 2 | 29 | -4.636267 | hypothetical protein | |
SPH_0093 | 3 | 33 | -4.443099 | hypothetical protein | |
SPH_0094 | 3 | 28 | -3.524814 | hypothetical protein | |
SPH_0095 | 1 | 23 | -2.701403 | hypothetical protein | |
SPH_0097 | 1 | 20 | -2.550057 | hypothetical protein | |
SPH_0096 | 1 | 20 | -2.262512 | hypothetical protein | |
SPH_0098 | 1 | 20 | -1.963067 | hypothetical protein | |
SPH_0099 | 2 | 18 | -1.439498 | PBSX family phage terminase large subunit | |
SPH_0100 | 0 | 19 | -1.446239 | phage minor capsid protein | |
SPH_0101 | 2 | 20 | -1.170420 | hypothetical protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_0076 | HTHTETR | 27 | 0.011 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_0080 | IGASERPTASE | 35 | 4e-04 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. |
3 | SPH_0215 | SPH_0258 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
SPH_0215 | 2 | 21 | -0.662039 | argininosuccinate synthase | |
SPH_0216 | 4 | 24 | -2.132242 | argininosuccinate lyase | |
SPH_0217 | 8 | 32 | -8.060823 | hypothetical protein | |
SPH_0218 | 7 | 32 | -9.720599 | hypothetical protein | |
SPH_0219 | 6 | 32 | -9.856501 | hypothetical protein | |
SPH_0220 | 6 | 32 | -9.953696 | hypothetical protein | |
SPH_0221 | 3 | 29 | -10.340755 | hypothetical protein | |
SPH_0222 | 4 | 30 | -9.259408 | hypothetical protein | |
SPH_0223 | 3 | 31 | -9.787420 | hypothetical protein | |
SPH_0224 | 3 | 33 | -9.306578 | hypothetical protein | |
SPH_0225 | 2 | 33 | -10.377132 | hypothetical protein | |
SPH_0226 | 1 | 32 | -9.616569 | hypothetical protein | |
SPH_0227 | 7 | 33 | -4.526482 | hypothetical protein | |
SPH_0228 | 7 | 33 | -5.058663 | hypothetical protein | |
SPH_0229 | 6 | 25 | 0.375826 | hypothetical protein | |
SPH_0230 | 5 | 23 | 1.078710 | hypothetical protein | |
SPH_0231 | 0 | 18 | 2.945021 | hypothetical protein | |
SPH_0232 | -2 | 21 | 3.886565 | hypothetical protein | |
SPH_0233 | 2 | 26 | 5.600304 | hypothetical protein | |
SPH_0234 | 1 | 24 | 5.619950 | tRNA-specific 2-thiouridylase MnmA | |
SPH_0235 | 1 | 24 | 4.633638 | MutT/nudix family protein | |
SPH_0236 | 1 | 24 | 4.432279 | tRNA uridine 5-carboxymethylaminomethyl | |
SPH_0237 | -1 | 22 | 3.923971 | metallo-beta-lactamase superfamily protein | |
SPH_0238 | 0 | 21 | 2.322243 | hypothetical protein | |
SPH_0239 | -1 | 25 | 4.954417 | hypothetical protein | |
SPH_0240 | 0 | 26 | 4.809807 | bacteriocin-type signal sequence | |
SPH_0241 | 1 | 22 | 0.069676 | hypothetical protein | |
SPH_0242 | 1 | 23 | -2.599994 | glycoprotein endopeptidase | |
SPH_0243 | 2 | 25 | -5.807974 | ribosomal-protein-alanine acetyltransferase | |
SPH_0244 | 2 | 27 | -7.048132 | DNA-binding/iron metalloprotein/AP endonuclease | |
SPH_0247 | 2 | 34 | -10.769219 | degenerative transposase | |
SPH_0248 | 1 | 31 | -9.685532 | glycosyl transferase, group 1 family protein | |
SPH_0249 | 1 | 29 | -9.111280 | glycosyl transferase | |
SPH_0250 | 1 | 26 | -7.608676 | ABC transporter ATP-binding protein | |
SPH_0251 | 0 | 19 | -5.502757 | hypothetical protein | |
SPH_0252 | 0 | 19 | -4.520410 | UDP-glucose 6-dehydrogenase | |
SPH_0253 | -2 | 16 | -0.645062 | MutR | |
SPH_0254 | 0 | 17 | -0.296161 | hypothetical protein | |
SPH_0255 | 0 | 14 | -0.122956 | CAAX amino protease | |
SPH_0256 | 2 | 20 | 0.439219 | transporter major facilitator family protein | |
SPH_0257 | 0 | 17 | 3.019064 | hypothetical protein | |
SPH_0258 | -1 | 18 | 3.086408 | branched-chain amino acid permease |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_0218 | PRTACTNFAMLY | 27 | 0.025 | Pertactin virulence factor family signature. | |
>PRTACTNFAMLY#Pertactin virulence factor family signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_0232 | GPOSANCHOR | 67 | 2e-13 | Gram-positive coccus surface protein anchor signature. | |
>GPOSANCHOR#Gram-positive coccus surface protein anchor signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_0238 | BACINVASINB | 25 | 0.042 | Salmonella/Shigella invasin protein B signature. | |
>BACINVASINB#Salmonella/Shigella invasin protein B signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_0243 | SACTRNSFRASE | 31 | 0.001 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. |
4 | SPH_0286 | SPH_0307 | Y ![]() | N | N | Genomic Island |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
SPH_0286 | 0 | 15 | -4.923637 | hypothetical protein | |
SPH_0287 | 0 | 15 | -4.916848 | hypothetical protein | |
SPH_0288 | 0 | 16 | -4.988610 | magnesium and cobalt transporter | |
SPH_0289 | 2 | 21 | -6.351759 | prophage Sa05, site-specific recombinase phage | |
SPH_0290 | 1 | 25 | -7.345049 | ATPase AAA | |
SPH_0291 | 3 | 25 | -3.967167 | DNA-binding phage protein | |
SPH_0292 | 3 | 34 | -0.167113 | hypothetical protein | |
SPH_0293 | 2 | 34 | 0.515680 | hypothetical protein | |
SPH_0294 | 2 | 35 | 1.327424 | hypothetical protein | |
SPH_0295 | 4 | 32 | 0.910068 | hypothetical protein | |
SPH_0296 | 5 | 31 | 0.811302 | hypothetical protein | |
SPH_0297 | 5 | 30 | 0.854307 | phage protein | |
SPH_0298 | 5 | 29 | 0.367558 | phage protein | |
SPH_0299 | 5 | 28 | -0.175222 | phage protein | |
SPH_0300 | 1 | 21 | 2.535541 | prophage Sa05, P4 family DNA primase | |
SPH_0301 | 0 | 20 | 3.603214 | hypothetical protein | |
SPH_0302 | -1 | 19 | 3.514666 | phage protein | |
SPH_0303 | -2 | 17 | 3.114143 | hypothetical protein | |
SPH_0304 | -1 | 18 | 3.280094 | phage protein | |
SPH_0305 | -2 | 18 | 3.586400 | excinuclease ABC subunit A | |
SPH_0306 | -2 | 16 | 0.180030 | Xaa-Pro dipeptidase | |
SPH_0307 | 2 | 18 | -1.225964 | transcriptional regulator Spx |
5 | SPH_0457 | SPH_0462 | Y ![]() | N | N | Genomic Island |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
SPH_0457 | -2 | 19 | -3.447622 | Cps19aC | |
SPH_0458 | -1 | 21 | -4.998236 | tyrosine-protein kinase CpsD | |
SPH_0459 | 0 | 20 | -6.134115 | galactosyl transferase CpsE | |
SPH_0460 | -1 | 21 | -6.418776 | UDP-N-acetyl-D-mannosamine transferase | |
SPH_0461 | -1 | 18 | -5.158625 | Cps19aG | |
SPH_0462 | -1 | 16 | -4.579568 | glycosyl transferase |
6 | SPH_0502 | SPH_0515 | Y ![]() | N | Y | Genomic Island |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
SPH_0502 | -1 | 17 | -3.243804 | integrase core subunit | |
SPH_0504 | -2 | 17 | -2.438832 | pts system mannitol-specific eiicb component | |
SPH_0505 | -2 | 11 | -0.955622 | transcriptional regulator MtlR | |
SPH_0506 | -2 | 19 | 0.883970 | mannitol-specific phosphotransferase enzyme IIA | |
SPH_0507 | -1 | 20 | 1.737988 | mannitol-1-phosphate 5-dehydrogenase | |
SPH_0508 | 0 | 24 | 2.638761 | hypothetical protein | |
SPH_0509 | -1 | 23 | 2.687809 | trigger factor | |
SPH_0510 | -1 | 24 | 3.727628 | RecD/TraA family helicase | |
SPH_0511 | -1 | 22 | 3.839553 | signal peptidase I | |
SPH_0512 | 0 | 20 | 3.861899 | ribonuclease HIII | |
SPH_0513 | 0 | 19 | 3.425680 | hypothetical protein | |
SPH_0514 | -2 | 17 | 3.672771 | CvpA family protein | |
SPH_0515 | -2 | 16 | 3.677978 | MutS2 family protein |
7 | SPH_0532 | SPH_0545 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
SPH_0532 | -2 | 13 | 3.159270 | acetyl-CoA carboxylase biotin carboxyl carrier | |
SPH_0533 | -1 | 13 | 2.178644 | (3R)-hydroxymyristoyl-ACP dehydratase | |
SPH_0534 | -3 | 14 | 2.005676 | acetyl-CoA carboxylase biotin carboxylase | |
SPH_0535 | -3 | 14 | 1.863046 | acetyl-CoA carboxylase subunit beta | |
SPH_0536 | -1 | 19 | 1.100031 | acetyl-CoA carboxylase subunit alpha | |
SPH_0537 | 0 | 24 | 2.105464 | hypothetical protein | |
SPH_0538 | 0 | 27 | 2.890009 | hypothetical protein | |
SPH_0539 | 1 | 31 | 3.901533 | transcription antitermination protein NusB | |
SPH_0540 | 0 | 28 | 4.352796 | Gls24 family general stress protein | |
SPH_0541 | 1 | 29 | 4.340861 | elongation factor P | |
SPH_0542 | 0 | 26 | 4.314934 | aspartyl/glutamyl-tRNA amidotransferase subunit | |
SPH_0543 | 0 | 22 | 3.609904 | aspartyl/glutamyl-tRNA amidotransferase subunit | |
SPH_0544 | -1 | 17 | 3.498389 | aspartyl/glutamyl-tRNA amidotransferase subunit | |
SPH_0545 | -2 | 16 | 3.435820 | peptide chain release factor 3 |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_0532 | RTXTOXIND | 27 | 0.023 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_0545 | TCRTETOQM | 230 | 3e-70 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family |
8 | SPH_0577 | SPH_0587 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
SPH_0577 | 3 | 22 | -2.314931 | sortase | |
SPH_0578 | 4 | 22 | -3.418131 | sortase | |
SPH_0582 | 3 | 23 | -5.277500 | hypothetical protein | |
SPH_0583 | 2 | 23 | -5.179500 | hypothetical protein | |
SPH_0584 | 3 | 25 | -5.124097 | hypothetical protein | |
SPH_0585 | 3 | 27 | -4.884939 | ROK family protein | |
SPH_0586 | 2 | 21 | -3.192692 | lichenan permease IIC component | |
SPH_0587 | 2 | 18 | -2.614729 | hypothetical protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_0586 | RTXTOXINA | 29 | 0.044 | Gram-negative bacterial RTX toxin determinant A family... | |
>RTXTOXINA#Gram-negative bacterial RTX toxin determinant A family |
9 | SPH_0608 | SPH_0692 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
SPH_0608 | 3 | 31 | 0.713516 | phosphoglycerate kinase | |
SPH_0609 | 1 | 18 | -3.044058 | hypothetical protein | |
SPH_0610 | 0 | 21 | -4.365124 | HTH-type transcriptional regulator GlnR | |
SPH_0611 | 1 | 23 | -5.675365 | glutamine synthetase, type I | |
SPH_0612 | 3 | 34 | -8.989170 | hypothetical protein | |
SPH_0613 | 1 | 30 | -8.216731 | hypothetical protein | |
SPH_0614 | 1 | 25 | -6.962384 | type I site-specific deoxyribonuclease chain S | |
SPH_0615 | 0 | 24 | -6.844139 | phage integrase integrase/recombinase | |
SPH_0617 | 0 | 23 | -6.276493 | type I restriction modification DNA specificity | |
SPH_0616 | 0 | 17 | -4.559665 | type I restriction-modification system, S | |
SPH_0618 | 0 | 12 | -2.753687 | type I restriction enzyme EcoEI M protein | |
SPH_0619 | 2 | 18 | -0.379640 | type I restriction-modification system, R | |
SPH_0620 | 2 | 24 | 2.460159 | hypothetical protein | |
SPH_0621 | 2 | 25 | 2.745271 | hypothetical protein | |
SPH_0622 | 3 | 26 | 3.352580 | heat-inducible transcription repressor | |
SPH_0623 | 2 | 27 | 3.559159 | heat shock protein GrpE | |
SPH_0624 | 2 | 22 | 3.360649 | molecular chaperone DnaK | |
SPH_0625 | 0 | 21 | 3.580485 | molecular chaperone DnaJ | |
SPH_0626 | 1 | 22 | 1.628442 | hypothetical protein | |
SPH_0627 | 2 | 24 | 2.156220 | histidine triad domain-containing protein | |
SPH_0628 | 3 | 24 | 0.576198 | ABC-type transporter ATP-binding protein EcsA | |
SPH_0629 | 5 | 23 | -0.482500 | ABC transporter permease | |
SPH_0630 | 3 | 19 | -2.314361 | BlpT protein, fusion | |
SPH_0631 | 3 | 17 | -2.958312 | BlpS protein | |
SPH_0632 | 3 | 17 | -2.637821 | response regulator | |
SPH_0633 | 2 | 18 | -3.137112 | histidine kinase | |
SPH_0634 | -1 | 21 | -2.639079 | double glycine cleavage site bacteriolysin | |
SPH_0635 | 0 | 22 | -2.808313 | BlpC ABC transporter | |
SPH_0636 | 1 | 22 | -2.607802 | transport/processing ATP-binding protein ComA | |
SPH_0637 | 5 | 35 | -2.665261 | hypothetical protein | |
SPH_0638 | 5 | 29 | -4.819856 | bacteriocin BlpJ | |
SPH_0639 | 3 | 22 | -4.984271 | hypothetical protein | |
SPH_0640 | 4 | 22 | -5.648911 | hypothetical protein | |
SPH_0641 | -1 | 19 | -3.567733 | hypothetical protein | |
SPH_0642 | -1 | 17 | -2.294693 | hypothetical protein | |
SPH_0643 | -1 | 16 | -1.255442 | hypothetical protein | |
SPH_0644 | -3 | 16 | 0.532657 | immunity protein BlpY | |
SPH_0646 | -2 | 20 | 1.161405 | CAAX amino protease | |
SPH_0647 | -1 | 24 | 1.937796 | phosphotransferase | |
SPH_0648 | 3 | 22 | 3.218277 | tRNA (guanine-N(7)-)-methyltransferase | |
SPH_0649 | 4 | 24 | 3.271766 | hypothetical protein | |
SPH_0650 | 3 | 22 | 2.819129 | transcription elongation factor NusA | |
SPH_0651 | 3 | 18 | 2.631066 | hypothetical protein | |
SPH_0652 | 2 | 18 | 2.304197 | hypothetical protein | |
SPH_0653 | 3 | 20 | 2.351005 | translation initiation factor IF-2 | |
SPH_0654 | 1 | 16 | -0.420056 | ribosome-binding factor A | |
SPH_0655 | -1 | 17 | 1.833679 | hypothetical protein | |
SPH_0656 | -1 | 24 | 2.561370 | hypothetical protein | |
SPH_0657 | -1 | 21 | 2.604311 | hypothetical protein | |
SPH_0658 | 0 | 22 | 3.083159 | hypothetical protein | |
SPH_0659 | 0 | 22 | 3.510213 | hypothetical protein | |
SPH_0660 | 1 | 20 | 1.995705 | hemerythrin HHE cation binding domain-containing | |
SPH_0661 | 1 | 22 | 2.978670 | hypothetical protein | |
SPH_0662 | 1 | 21 | 2.795768 | hypothetical protein | |
SPH_0663 | 0 | 15 | 0.414497 | hypothetical protein | |
SPH_0664 | -1 | 14 | -1.211331 | acetyltransferase | |
SPH_0665 | -1 | 12 | -1.984543 | shikimate kinase | |
SPH_0666 | 0 | 13 | -2.857931 | valyl-tRNA synthetase | |
SPH_0667 | 2 | 31 | -8.159280 | hypothetical protein | |
SPH_0668 | 2 | 31 | -7.970323 | hypothetical protein | |
SPH_0669 | 1 | 24 | -5.341438 | hypothetical protein | |
SPH_0670 | 0 | 23 | -4.518811 | Fic family protein | |
SPH_0674 | -3 | 17 | -1.874495 | transcription antiterminator LicT | |
SPH_0675 | -3 | 16 | -1.421031 | phosphotransferase system sugar-specific EII | |
SPH_0677 | -4 | 16 | -0.265101 | beta-glucosidase | |
SPH_0678 | -1 | 18 | 1.557434 | phenylalanyl-tRNA synthetase subunit alpha | |
SPH_0679 | 0 | 24 | 1.397562 | acetyltransferase | |
SPH_0680 | 0 | 24 | 1.920286 | phenylalanyl-tRNA synthetase subunit beta | |
SPH_0681 | -1 | 23 | 1.506290 | hypothetical protein | |
SPH_0682 | 1 | 24 | 3.334100 | transposase | |
SPH_0683 | 0 | 21 | 3.132456 | helix-turn-helix domain-containing protein | |
SPH_0684 | 0 | 20 | 3.302419 | 5-methyltetrahydropteroyltriglutamate-- | |
SPH_0685 | -1 | 17 | 3.708820 | 5,10-methylenetetrahydrofolate reductase | |
SPH_0686 | -1 | 17 | 3.740653 | polynucleotide phosphorylase | |
SPH_0687 | -3 | 18 | 2.004662 | serine O-acetyltransferase | |
SPH_0688 | -2 | 14 | 0.615316 | acetyltransferase | |
SPH_0689 | -2 | 13 | 0.860203 | cysteinyl-tRNA synthetase | |
SPH_0690 | 0 | 13 | 0.754231 | ribonuclease III family protein | |
SPH_0691 | 1 | 14 | 0.724135 | leucine-rich protein | |
SPH_0692 | 2 | 16 | 0.818304 | hypothetical protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_0620 | BCTERIALGSPC | 27 | 0.003 | Bacterial general secretion pathway protein C signa... | |
>BCTERIALGSPC#Bacterial general secretion pathway protein C | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_0624 | SHAPEPROTEIN | 148 | 7e-42 | Bacterial cell shape determinant MreB/Mbl protein s... | |
>SHAPEPROTEIN#Bacterial cell shape determinant MreB/Mbl protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_0635 | RTXTOXIND | 75 | 1e-16 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_0653 | TCRTETOQM | 86 | 2e-19 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_0666 | RTXTOXIND | 31 | 0.021 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_0679 | SACTRNSFRASE | 36 | 2e-05 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_0688 | SACTRNSFRASE | 32 | 0.002 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_0691 | HTHFIS | 34 | 4e-04 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. |
10 | SPH_0710 | SPH_0749 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
SPH_0710 | -2 | 15 | 3.430768 | matrixin family protein | |
SPH_0711 | -1 | 15 | 3.301425 | excinuclease ABC subunit C | |
SPH_0712 | -1 | 17 | 2.570372 | metallophosphoesterase | |
SPH_0713 | 0 | 20 | 2.548297 | glutamine ABC transporter substrate-binding | |
SPH_0714 | 2 | 23 | 2.608132 | oxidoreductase | |
SPH_0715 | -1 | 20 | 3.179233 | dipeptidase PepV | |
SPH_0716 | -1 | 16 | 2.826557 | uracil DNA glycosylase | |
SPH_0717 | -1 | 16 | 2.514186 | hypothetical protein | |
SPH_0718 | 0 | 15 | 2.375161 | hypothetical protein | |
SPH_0719 | 3 | 23 | 2.205104 | branched-chain amino acid transport system II | |
SPH_0720 | 3 | 24 | 2.328206 | peptidase, M42 | |
SPH_0721 | 4 | 27 | -0.137640 | HIT family protein | |
SPH_0722 | 1 | 19 | 0.429586 | D-alanyl-D-alanine carboxypeptidase | |
SPH_0723 | -1 | 18 | 0.146961 | 50S ribosomal protein L11 | |
SPH_0724 | -1 | 13 | -0.156622 | 50S ribosomal protein L1 | |
SPH_0725 | 1 | 22 | -0.296577 | chlorohydrolase | |
SPH_0726 | 3 | 22 | -0.803204 | hypothetical protein | |
SPH_0727 | 3 | 25 | 0.375917 | ABC transporter ATP-binding protein - role in | |
SPH_0728 | 2 | 21 | -5.472276 | membrane protein | |
SPH_0729 | 2 | 23 | -5.972261 | ABC transporter permease | |
SPH_0730 | 2 | 25 | -6.355065 | hypothetical protein | |
SPH_0731 | 1 | 25 | -6.307340 | hypothetical protein | |
SPH_0732 | 0 | 22 | -5.194195 | hypothetical protein | |
SPH_0733 | -3 | 17 | -2.351332 | serine protease | |
SPH_0735 | 1 | 18 | 0.836390 | transposase | |
SPH_0738 | 1 | 19 | 0.795702 | phosphotransferase system sugar-specific EII | |
SPH_0739 | 1 | 19 | 0.941612 | PTS system, galactose-specific IIB component | |
SPH_0740 | 0 | 17 | 0.696947 | phosphotransferase system sugar-specific EII | |
SPH_0741 | 0 | 11 | 0.847661 | beta-galactosidase | |
SPH_0742 | -1 | 21 | -2.253294 | hypothetical protein | |
SPH_0743 | 2 | 23 | -2.033369 | hypothetical protein | |
SPH_0744 | 6 | 23 | -1.115395 | hypothetical protein | |
SPH_0745 | 5 | 20 | -0.256069 | hypothetical protein | |
SPH_0748 | 3 | 18 | 0.813459 | SAM-dependent methyltransferase | |
SPH_0749 | 3 | 17 | 0.413240 | hypothetical protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_0710 | CABNDNGRPT | 31 | 0.004 | NodO calcium binding signature. | |
>CABNDNGRPT#NodO calcium binding signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_0726 | SECBCHAPRONE | 29 | 0.004 | Bacterial protein-transport SecB chaperone protein ... | |
>SECBCHAPRONE#Bacterial protein-transport SecB chaperone protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_0729 | ACRIFLAVINRP | 28 | 0.044 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_0733 | SUBTILISIN | 93 | 4e-22 | Subtilisin serine protease family (S8) signature. | |
>SUBTILISIN#Subtilisin serine protease family (S8) signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_0741 | GPOSANCHOR | 40 | 1e-04 | Gram-positive coccus surface protein anchor signature. | |
>GPOSANCHOR#Gram-positive coccus surface protein anchor signature. |
11 | SPH_0763 | SPH_0789 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
SPH_0763 | -3 | 17 | 3.483355 | glucokinase (glucose kinase) | |
SPH_0764 | -2 | 20 | 3.680052 | thymidylate synthase | |
SPH_0765 | -1 | 21 | 3.575601 | hypothetical protein | |
SPH_0766 | -1 | 24 | 3.585380 | tRNA delta(2)-isopentenylpyrophosphate | |
SPH_0767 | -1 | 23 | 2.806387 | GTP-binding protein HflX | |
SPH_0768 | -1 | 21 | 2.027085 | cystathionine beta-lyase | |
SPH_0769 | -2 | 20 | 1.652966 | ribonuclease Z | |
SPH_0770 | 0 | 21 | 0.967782 | oxidoreductase | |
SPH_0771 | 2 | 24 | 1.571075 | regulatory function on capsule expression | |
SPH_0772 | 2 | 26 | 0.519132 | hypothetical protein | |
SPH_0773 | 1 | 25 | 0.670957 | rhodanese family protein | |
SPH_0774 | 2 | 21 | -0.047825 | hypothetical protein | |
SPH_0775 | 0 | 19 | 1.356200 | ribosomal small subunit pseudouridine synthase | |
SPH_0776 | 0 | 19 | 1.325134 | GTP-binding protein TypA | |
SPH_0777 | 0 | 11 | 0.298180 | hypothetical protein | |
SPH_0778 | 1 | 13 | 1.221269 | bacteriocin | |
SPH_0781 | 0 | 13 | 1.738833 | ABC transporter ATP-binding protein | |
SPH_0782 | 0 | 15 | 2.269035 | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate | |
SPH_0783 | 0 | 13 | 0.359243 | undecaprenyldiphospho-muramoylpentapeptide | |
SPH_0784 | 2 | 17 | -2.143382 | cell division protein DivIB | |
SPH_0785 | 2 | 21 | -4.000463 | orotidine 5'-phosphate decarboxylase | |
SPH_0786 | 4 | 26 | -6.598743 | orotate phosphoribosyltransferase | |
SPH_0787 | 2 | 24 | -6.690646 | hypothetical protein | |
SPH_0788 | 1 | 20 | -4.920460 | hypothetical protein | |
SPH_0789 | 0 | 18 | -4.453710 | lipoprotein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_0763 | PF03309 | 35 | 2e-04 | Bvg accessory factor | |
>PF03309#Bvg accessory factor | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_0770 | DHBDHDRGNASE | 80 | 5e-20 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_0776 | TCRTETOQM | 181 | 1e-51 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_0784 | IGASERPTASE | 42 | 4e-06 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. |
12 | SPH_0817 | SPH_0847 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
SPH_0817 | 0 | 30 | -3.416842 | pyruvate oxidase | |
SPH_0818 | 4 | 29 | -7.722278 | glyoxalase | |
SPH_0820 | 3 | 30 | -8.098494 | transposase | |
SPH_0822 | 2 | 32 | -8.180894 | hypothetical protein | |
SPH_0824 | 2 | 32 | -8.188790 | NanE/NanK bifunctional enzyme | |
SPH_0825 | 2 | 33 | -8.696207 | protein LplB | |
SPH_0826 | 2 | 33 | -9.013994 | protein LplC | |
SPH_0827 | 1 | 33 | -9.013871 | hypothetical protein | |
SPH_0828 | 1 | 32 | -8.603972 | ABC transporter substrate-binding protein | |
SPH_0829 | 1 | 25 | -6.581836 | dihydrolipoamide dehydrogenase | |
SPH_0830 | 0 | 16 | -2.119961 | diadenosine tetraphosphate | |
SPH_0833 | -1 | 18 | -1.023440 | hypothetical protein | |
SPH_0835 | 0 | 19 | 1.440024 | hypothetical protein | |
SPH_0836 | -1 | 19 | 1.922991 | 6-phospho-beta-glucosidase | |
SPH_0837 | 1 | 19 | 1.415352 | mannose-6-phosphate isomerase | |
SPH_0838 | 0 | 19 | 1.570218 | sodium-dependent transporter | |
SPH_0841 | 0 | 16 | 1.136891 | hypothetical protein | |
SPH_0843 | 2 | 17 | 1.556908 | hypothetical protein | |
SPH_0844 | 1 | 20 | 1.005982 | hypothetical protein | |
SPH_0845 | 2 | 24 | 0.705839 | TetR family transcriptional regulator | |
SPH_0846 | 2 | 23 | 1.386170 | ComE operon protein 2 | |
SPH_0847 | 2 | 25 | 0.732409 | uracil phosphoribosyltransferase |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_0817 | ANTHRAXTOXNA | 29 | 0.046 | Anthrax toxin LF subunit signature. | |
>ANTHRAXTOXNA#Anthrax toxin LF subunit signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_0829 | PF03944 | 30 | 0.025 | delta endotoxin | |
>PF03944#delta endotoxin | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_0844 | BACINVASINB | 30 | 0.012 | Salmonella/Shigella invasin protein B signature. | |
>BACINVASINB#Salmonella/Shigella invasin protein B signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_0845 | HTHTETR | 55 | 9e-12 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. |
13 | SPH_0989 | SPH_1013 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
SPH_0989 | -1 | 12 | -3.421366 | hypothetical protein | |
SPH_0990 | -1 | 14 | -4.666324 | carbamoylphosphate synthase large subunit | |
SPH_0991 | -1 | 19 | -6.105212 | hypothetical protein | |
SPH_0992 | 0 | 22 | -6.844770 | type I restriction modification enzyme methylase | |
SPH_0993 | -2 | 21 | -5.407791 | type I restriction enzyme EcoBI specificity | |
SPH_0994 | -3 | 20 | -4.462334 | hypothetical protein | |
SPH_0995 | -2 | 18 | -3.891069 | prophage maintenance system killer protein | |
SPH_0996 | -2 | 14 | -2.345995 | phage integrase integrase/recombinase | |
SPH_0997 | -2 | 13 | -1.777166 | restriction modification system DNA specificity | |
SPH_0998 | -2 | 11 | -0.611151 | type I restriction-modification system R | |
SPH_0999 | -1 | 16 | 0.441796 | chlorohydrolase | |
SPH_1000 | -1 | 16 | 0.178150 | arginine repressor ArgR | |
SPH_1001 | -1 | 14 | -0.066524 | x-prolyl-dipeptidyl aminopeptidase | |
SPH_1002 | -1 | 15 | -0.406864 | DNA polymerase III DnaE | |
SPH_1003 | 5 | 31 | -0.308199 | 6-phosphofructokinase | |
SPH_1004 | 2 | 21 | -2.337061 | pyruvate kinase | |
SPH_1005 | 0 | 17 | -3.006421 | hypothetical protein | |
SPH_1007 | 0 | 15 | -1.671624 | lipoprotein | |
SPH_1008 | 1 | 19 | -1.873241 | mobile genetic element | |
SPH_1009 | 2 | 14 | -0.011588 | hypothetical protein | |
SPH_1010 | 2 | 15 | 0.525983 | hypothetical protein | |
SPH_1011 | 1 | 16 | 1.547634 | ABC transporter substrate-binding protein | |
SPH_1012 | 2 | 16 | 1.462512 | permease | |
SPH_1013 | 2 | 17 | 1.275118 | hypothetical protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_1000 | ARGREPRESSOR | 117 | 1e-36 | Bacterial arginine repressor signature. | |
>ARGREPRESSOR#Bacterial arginine repressor signature. |
14 | SPH_1040 | SPH_1059 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
SPH_1040 | 0 | 16 | 3.598290 | gamma-glutamyl kinase | |
SPH_1041 | 2 | 17 | 3.391182 | gamma-glutamyl phosphate reductase | |
SPH_1042 | 1 | 18 | 3.377413 | pyrroline-5-carboxylate reductase | |
SPH_1043 | -1 | 19 | 3.322887 | thymidylate kinase | |
SPH_1044 | 0 | 20 | 2.847627 | DNA polymerase III subunit delta' | |
SPH_1045 | 0 | 24 | 3.455352 | DNA replication intiation control protein YabA | |
SPH_1046 | 0 | 22 | 3.432194 | hypothetical protein | |
SPH_1047 | 0 | 20 | 3.654008 | tRNA (uracil-5-)-methyltransferase Gid | |
SPH_1048 | 0 | 19 | 2.661683 | uridylate kinase | |
SPH_1049 | 0 | 19 | 2.652240 | ribosome recycling factor | |
SPH_1050 | 2 | 21 | 2.063563 | S1 RNA-binding domain-containing protein | |
SPH_1051 | 2 | 24 | 1.662949 | hypothetical protein | |
SPH_1052 | 2 | 23 | 1.639976 | PhoH family protein | |
SPH_1053 | 2 | 22 | 0.324606 | acetyltransferase | |
SPH_1054 | 4 | 21 | 0.182919 | competence protein | |
SPH_1055 | 2 | 18 | -0.581411 | DNA internalization-related competence protein | |
SPH_1056 | -1 | 16 | -1.710820 | hypothetical protein | |
SPH_1057 | 1 | 17 | -1.572616 | ABC transporter ATP-binding protein | |
SPH_1058 | 2 | 19 | -1.900134 | hypothetical protein | |
SPH_1059 | 4 | 18 | 0.498174 | hypothetical protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_1040 | CARBMTKINASE | 49 | 7e-09 | Bacterial carbamate kinase signature. | |
>CARBMTKINASE#Bacterial carbamate kinase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_1055 | ACRIFLAVINRP | 30 | 0.035 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. |
15 | SPH_1090 | SPH_1098 | Y ![]() | N | N | Genomic Island |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
SPH_1090 | 2 | 17 | -2.111210 | ADP-ribose pyrophosphatase | |
SPH_1091 | 1 | 16 | -2.491370 | hypothetical protein | |
SPH_1092 | 1 | 15 | -1.730731 | 5'-methylthioadenosine/S-adenosylhomocysteine | |
SPH_1093 | 4 | 14 | -2.123652 | hypothetical protein | |
SPH_1094 | 3 | 14 | -2.536037 | DNA polymerase III subunit epsilon | |
SPH_1095 | 3 | 12 | -2.865424 | glycerophosphoryl diester phosphodiesterase | |
SPH_1097 | 4 | 15 | -0.505674 | hypothetical protein | |
SPH_1098 | 3 | 15 | -0.708558 | hypothetical protein |
16 | SPH_1129 | SPH_1149 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
SPH_1129 | -1 | 14 | -3.017255 | pneumococcal vaccine antigen A | |
SPH_1130 | 0 | 21 | -4.336470 | hypothetical protein | |
SPH_1131 | 2 | 30 | -6.272649 | 23S rRNA (uracil-5-)-methyltransferase RumA | |
SPH_1132 | 10 | 45 | -8.855454 | hypothetical protein | |
SPH_1133 | 10 | 45 | -9.113585 | hypothetical protein | |
SPH_1134 | 10 | 44 | -9.007276 | ABC transporter substrate-binding protein - iron | |
SPH_1135 | 10 | 42 | -8.678245 | iron-compound ABC transporter permease | |
SPH_1136 | 5 | 36 | -8.263707 | ABC transporter membrane-spanning permease - | |
SPH_1137 | 4 | 31 | -7.486053 | ferric enterobactin transport ATP-binding | |
SPH_1138 | 3 | 33 | -7.668610 | hypothetical protein | |
SPH_1139 | 2 | 31 | -7.174462 | hypothetical protein | |
SPH_1140 | 2 | 27 | -5.717237 | hypothetical protein | |
SPH_1141 | 1 | 23 | -5.355685 | hypothetical protein | |
SPH_1142 | 3 | 17 | -3.436623 | hypothetical protein | |
SPH_1143 | 2 | 19 | -3.371205 | hypothetical protein | |
SPH_1144 | 1 | 19 | -3.699795 | hypothetical protein | |
SPH_1145 | 1 | 18 | -3.434943 | ADP-ribosylation/crystallin J1 | |
SPH_1146 | 3 | 21 | -4.465575 | hypothetical protein | |
SPH_1147 | 2 | 20 | -3.726878 | neopullulanase | |
SPH_1148 | 0 | 14 | -3.800239 | hypothetical protein | |
SPH_1149 | -2 | 13 | -3.093780 | aminoglycoside 6'-N-acetyltransferase |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_1134 | FERRIBNDNGPP | 60 | 3e-12 | Ferrichrome-binding periplasmic protein signature. | |
>FERRIBNDNGPP#Ferrichrome-binding periplasmic protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_1141 | FLGHOOKAP1 | 35 | 0.001 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_1149 | SACTRNSFRASE | 38 | 5e-06 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. |
17 | SPH_1227 | SPH_1267 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
SPH_1227 | -1 | 14 | -3.583813 | hypothetical protein | |
SPH_1228 | -1 | 15 | -3.357338 | hypothetical protein | |
SPH_1229 | -1 | 19 | -4.053931 | immunoglobulin A1 protease | |
SPH_1230 | 2 | 23 | -3.943019 | transposase | |
SPH_1231 | 3 | 27 | -4.033685 | hypothetical protein | |
SPH_1232 | 3 | 28 | -4.280489 | replication initiator protein A (RepA) | |
SPH_1233 | 3 | 28 | -5.095584 | methyl transferase | |
SPH_1234 | 2 | 27 | -7.942044 | hypothetical protein | |
SPH_1235 | 1 | 27 | -7.772217 | hypothetical protein | |
SPH_1236 | 2 | 26 | -7.161730 | hypothetical protein | |
SPH_1237 | 2 | 23 | -6.021924 | CAAX amino protease | |
SPH_1238 | 2 | 22 | -5.531539 | hypothetical protein | |
SPH_1239 | 1 | 20 | -4.305210 | hypothetical protein | |
SPH_1240 | 0 | 21 | -3.381659 | hypothetical protein | |
SPH_1241 | 1 | 20 | -3.401140 | hypothetical protein | |
SPH_1242 | 2 | 20 | -2.771904 | TraG/TraD family protein | |
SPH_1243 | 2 | 20 | -3.017007 | hypothetical protein | |
SPH_1244 | 2 | 20 | -3.182432 | hypothetical protein | |
SPH_1245 | 4 | 20 | -3.341488 | hypothetical protein | |
SPH_1246 | 4 | 20 | -3.259257 | hypothetical protein | |
SPH_1247 | 4 | 22 | -4.615819 | M23 peptidase domain-containing protein | |
SPH_1248 | 2 | 27 | -8.745595 | hypothetical protein | |
SPH_1249 | 1 | 25 | -7.530231 | Ig domain-containing protein | |
SPH_1252 | -1 | 25 | -7.765072 | hypothetical protein | |
SPH_1253 | -1 | 27 | -7.672535 | hypothetical protein | |
SPH_1254 | -1 | 26 | -7.470678 | hypothetical protein | |
SPH_1255 | -2 | 26 | -6.433317 | hypothetical protein | |
SPH_1256 | 0 | 23 | -5.575214 | hypothetical protein | |
SPH_1257 | 4 | 28 | -6.122908 | hypothetical protein | |
SPH_1258 | 5 | 29 | -5.603720 | DNA primase | |
SPH_1259 | 1 | 27 | -6.782681 | hypothetical protein | |
SPH_1260 | 1 | 28 | -7.808692 | methyl-accepting chemotaxis protein | |
SPH_1261 | 2 | 28 | -8.359348 | ATPases with chaperone activity, ATP-binding | |
SPH_1262 | 1 | 31 | -9.887704 | hypothetical protein | |
SPH_1263 | 0 | 29 | -9.201440 | signal recognition particle GTPase | |
SPH_1264 | 2 | 24 | -7.281074 | hypothetical protein | |
SPH_1265 | 1 | 22 | -6.459715 | hypothetical protein | |
SPH_1266 | 1 | 22 | -6.169238 | chloramphenicol O-acetyltransferase | |
SPH_1267 | 1 | 18 | -4.275077 | replication protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_1229 | PF03544 | 31 | 0.035 | Gram-negative bacterial tonB protein | |
>PF03544#Gram-negative bacterial tonB protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_1247 | cloacin | 31 | 0.028 | Cloacin signature. | |
>cloacin#Cloacin signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_1259 | PYOCINKILLER | 26 | 0.017 | Pyocin S killer protein signature. | |
>PYOCINKILLER#Pyocin S killer protein signature. |
18 | SPH_1282 | SPH_1289 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
SPH_1282 | 2 | 24 | -4.802170 | mutator MutT protein | |
SPH_1283 | 3 | 26 | -6.793355 | uracil-DNA glycosylase | |
SPH_1284 | 2 | 31 | -9.199918 | HAD family hydrolase | |
SPH_1285 | 2 | 35 | -10.141105 | hypothetical protein | |
SPH_1286 | 2 | 32 | -8.888010 | ABC-type multidrug/protein/lipid transport | |
SPH_1287 | 0 | 32 | -6.393681 | bacitracin transport ATP-binding protein BcrA | |
SPH_1288 | 0 | 28 | -5.660859 | hypothetical protein | |
SPH_1289 | 0 | 24 | -3.599841 | transcriptional regulator, TetR family protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_1289 | HTHTETR | 67 | 1e-15 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. |
19 | SPH_1402 | SPH_1417 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
SPH_1402 | 2 | 20 | -3.018022 | transposase | |
SPH_1403 | 2 | 26 | -3.039466 | hypothetical protein | |
SPH_1404 | 1 | 25 | -3.142623 | hypothetical protein | |
SPH_1405 | 2 | 25 | -3.595033 | hypothetical protein | |
SPH_1406 | 2 | 25 | -3.470810 | RNA polymerase sigma-70 region 4 family protein | |
SPH_1407 | 3 | 25 | -2.280635 | hypothetical protein | |
SPH_1408 | 1 | 23 | -1.049937 | transcriptional regulator | |
SPH_1409 | 0 | 22 | -0.596110 | tetracycline resistance protein | |
SPH_1410 | 0 | 20 | 0.089623 | tetracycline resistance determinant leader | |
SPH_1411 | 0 | 20 | 0.142546 | conjugative transposon protein | |
SPH_1412 | 0 | 20 | 0.456548 | NLP/P60 family protein | |
SPH_1413 | -1 | 17 | -0.726156 | conjugative transposon membrane protein | |
SPH_1414 | 1 | 19 | -1.786351 | conjugative transposon protein | |
SPH_1415 | 3 | 23 | -4.382326 | conjugative transposon membrane protein | |
SPH_1416 | 2 | 22 | -3.239129 | conjugative transposon protein | |
SPH_1417 | 2 | 20 | -2.814673 | hypothetical protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_1409 | TCRTETOQM | 1119 | 0.0 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_1413 | IGASERPTASE | 39 | 7e-05 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. |
20 | SPH_1432 | SPH_1483 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
SPH_1432 | 0 | 19 | -3.453665 | phosphatase YidA | |
SPH_1433 | 1 | 21 | -4.654583 | SAP domain-containing protein | |
SPH_1435 | 0 | 17 | 1.517331 | *50S ribosomal protein L19 | |
SPH_1436 | -1 | 18 | 1.371538 | camphor resistance protein CrcB | |
SPH_1437 | -1 | 17 | 1.563083 | camphor resistance protein CrcB | |
SPH_1438 | 0 | 16 | 1.128815 | hypothetical protein | |
SPH_1439 | -1 | 19 | 1.591405 | flavodoxin | |
SPH_1440 | -2 | 18 | 1.697144 | DHH subfamily 1 protein | |
SPH_1441 | 2 | 26 | 1.192178 | 50S ribosomal protein L31 | |
SPH_1442 | 0 | 23 | 0.426486 | hypothetical protein | |
SPH_1443 | 2 | 27 | 0.293510 | hypothetical protein | |
SPH_1444 | 1 | 21 | 0.464875 | hypothetical protein | |
SPH_1445 | -1 | 22 | -0.529677 | transposase | |
SPH_1446 | -1 | 21 | -0.705512 | glutamate dehydrogenase | |
SPH_1447 | 1 | 25 | -3.508909 | hypothetical protein | |
SPH_1448 | 4 | 23 | -3.106445 | hypothetical protein | |
SPH_1450 | 2 | 21 | -2.493221 | transposase | |
SPH_1451 | 4 | 24 | -4.741928 | hypothetical protein | |
SPH_1452 | 2 | 25 | -4.304522 | hypothetical protein | |
SPH_1453 | 1 | 24 | -3.405069 | hypothetical protein | |
SPH_1454 | 0 | 26 | -3.758430 | transposase subfamily protein | |
SPH_1455 | 1 | 28 | -4.921561 | integrase core subunit | |
SPH_1457 | 2 | 32 | -6.081907 | V-type ATP synthase subunit D | |
SPH_1458 | 1 | 32 | -5.278465 | V-type ATP synthase subunit B | |
SPH_1459 | 1 | 33 | -6.708140 | V-type ATP synthase subunit A | |
SPH_1460 | 2 | 36 | -9.173712 | V-type ATP synthase subunit F | |
SPH_1461 | 1 | 35 | -8.872127 | ATP synthase (C/AC39) subunit | |
SPH_1462 | -1 | 31 | -7.037232 | V-type sodium ATP synthase, subunit E | |
SPH_1463 | 1 | 29 | -6.106107 | V-type ATP synthase subunit K | |
SPH_1464 | 1 | 29 | -6.674649 | V-type ATP synthase subunit I | |
SPH_1465 | 2 | 27 | -5.534992 | hypothetical protein | |
SPH_1466 | 2 | 29 | -5.230487 | ROK family protein | |
SPH_1467 | 3 | 29 | -4.988373 | oxidoreductase YjhC | |
SPH_1468 | 2 | 28 | -5.637363 | sialidase B (neuraminidase B) | |
SPH_1469 | 2 | 27 | -5.925519 | hypothetical protein | |
SPH_1470 | 2 | 27 | -5.466538 | sodium:solute symporter family protein | |
SPH_1471 | 1 | 30 | -5.756022 | N-acetylneuraminate lyase | |
SPH_1472 | 0 | 30 | -8.077957 | N-acetylmannosamine-6-phosphate 2-epimerase | |
SPH_1473 | 0 | 30 | -8.278458 | RpiR family transcriptional regulator | |
SPH_1474 | 1 | 32 | -9.649244 | CAAX amino protease | |
SPH_1475 | 1 | 33 | -9.986011 | hypothetical protein | |
SPH_1476 | 2 | 33 | -9.713915 | hypothetical protein | |
SPH_1477 | 0 | 23 | -8.267949 | hypothetical protein | |
SPH_1478 | -2 | 20 | -6.543292 | ABC transporter ATP-binding protein | |
SPH_1479 | -2 | 17 | -5.686908 | drug efflux ABC transporter | |
SPH_1481 | 4 | 21 | -2.684628 | hypothetical protein | |
SPH_1482 | 2 | 18 | -0.847576 | CAAX amino protease | |
SPH_1484 | 2 | 16 | 0.705108 | transposase | |
SPH_1483 | 2 | 14 | 2.008007 | hypothetical protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_1435 | FLGMOTORFLIM | 26 | 0.041 | Flagellar motor switch protein FliM signature. | |
>FLGMOTORFLIM#Flagellar motor switch protein FliM signature. |
21 | SPH_1493 | SPH_1519 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
SPH_1493 | -1 | 13 | -3.021613 | homoserine dehydrogenase | |
SPH_1494 | 0 | 16 | -3.629116 | adaptor protein | |
SPH_1495 | -1 | 16 | -3.142447 | hypothetical protein | |
SPH_1496 | 1 | 17 | -1.745967 | hypothetical protein | |
SPH_1497 | 1 | 17 | -0.684114 | galactosyl transferase paralog | |
SPH_1498 | 0 | 14 | 1.038593 | glycosyl transferase, group 1 family protein | |
SPH_1499 | -1 | 13 | 1.871703 | licD3 protein | |
SPH_1500 | -1 | 14 | 2.461776 | LytR family transcriptional regulator | |
SPH_1501 | -1 | 15 | 3.678251 | prephenate dehydratase | |
SPH_1502 | -1 | 15 | 4.028393 | shikimate kinase | |
SPH_1503 | -1 | 18 | 4.051226 | 3-phosphoshikimate 1-carboxyvinyltransferase | |
SPH_1504 | -1 | 18 | 3.793094 | hypothetical protein | |
SPH_1505 | -1 | 18 | 3.475140 | prephenate dehydrogenase | |
SPH_1506 | -1 | 18 | 2.348203 | chorismate synthase | |
SPH_1507 | 0 | 21 | 1.471261 | 3-dehydroquinate synthase | |
SPH_1508 | -1 | 17 | 1.841588 | shikimate 5-dehydrogenase | |
SPH_1509 | -1 | 16 | 2.509461 | 3-dehydroquinate dehydratase | |
SPH_1510 | -2 | 16 | 2.370827 | methyltransferase | |
SPH_1511 | -2 | 17 | 2.457617 | hypothetical protein | |
SPH_1512 | -2 | 21 | 3.179805 | ABC transporter ATP-binding protein | |
SPH_1513 | -1 | 24 | 3.222082 | cytoplasmic alpha-amylase | |
SPH_1514 | -1 | 23 | 2.992626 | alanyl-tRNA synthetase | |
SPH_1515 | 0 | 24 | 2.581922 | hypothetical protein | |
SPH_1516 | -2 | 23 | 2.467484 | ABC transporter substrate-binding protein - | |
SPH_1517 | -2 | 23 | 2.698903 | spermidine/putrescine ABC transporter permease | |
SPH_1518 | 0 | 23 | 3.136270 | ABC transporter membrane-spanning permease - | |
SPH_1519 | -1 | 21 | 3.232235 | spermidine/putrescine import ATP-binding protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_1494 | BACINVASINB | 28 | 0.035 | Salmonella/Shigella invasin protein B signature. | |
>BACINVASINB#Salmonella/Shigella invasin protein B signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_1498 | ANTHRAXTOXNA | 30 | 0.019 | Anthrax toxin LF subunit signature. | |
>ANTHRAXTOXNA#Anthrax toxin LF subunit signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_1516 | MYCMG045 | 48 | 4e-08 | Hypothetical mycoplasma lipoprotein (MG045) signature. | |
>MYCMG045#Hypothetical mycoplasma lipoprotein (MG045) signature. |
22 | SPH_1528 | SPH_1533 | Y ![]() | N | N | Genomic Island |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
SPH_1528 | 1 | 19 | 3.198269 | phosphate transporter ATP-binding protein | |
SPH_1529 | 2 | 20 | 3.672887 | phosphate ABC transporter permease PstA | |
SPH_1530 | 3 | 22 | 3.421212 | phosphate ABC transporter permease PstC | |
SPH_1531 | 3 | 23 | 2.758205 | phosphate-binding protein PstS 1 (PBP 1) | |
SPH_1532 | 4 | 24 | 1.846083 | hypothetical protein | |
SPH_1533 | 2 | 22 | 2.662482 | NOL1/NOP2/sun family protein |
23 | SPH_1545 | SPH_1564 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
SPH_1545 | -2 | 18 | 3.416000 | 30S ribosomal protein S21 | |
SPH_1546 | -2 | 16 | 4.159493 | glucosamine-6-phosphate deaminase | |
SPH_1547 | -2 | 17 | 3.611867 | S-adenosylmethionine:tRNA | |
SPH_1548 | -1 | 14 | 2.670799 | choline binding protein | |
SPH_1549 | 1 | 16 | 0.522019 | acetyltransferase | |
SPH_1550 | 1 | 15 | -1.306455 | NAD synthetase | |
SPH_1551 | 0 | 16 | -2.300816 | nicotinate phosphoribosyltransferase | |
SPH_1552 | 0 | 19 | -6.169177 | hypothetical protein | |
SPH_1553 | 0 | 15 | -3.021828 | hypothetical protein | |
SPH_1554 | 1 | 17 | -5.657282 | hypothetical protein | |
SPH_1555 | 1 | 16 | -2.914163 | ABC transporter ATP-binding protein - multidrug | |
SPH_1556 | 0 | 14 | -1.313153 | U32 family peptidase | |
SPH_1557 | 0 | 12 | -1.212408 | hypothetical protein | |
SPH_1558 | -1 | 9 | -0.870670 | peptidase, U32 family protein | |
SPH_1561 | 0 | 12 | -2.303694 | DNA modification methyltransferase M.XbaI | |
SPH_1562 | -1 | 8 | 0.087913 | GMP synthase | |
SPH_1563 | 2 | 16 | 0.194022 | GntR family transcriptional regulator | |
SPH_1564 | 2 | 18 | 0.112045 | membrane protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_1548 | BCTLIPOCALIN | 26 | 0.038 | Bacterial lipocalin signature. | |
>BCTLIPOCALIN#Bacterial lipocalin signature. |
24 | SPH_1578 | SPH_1603 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
SPH_1578 | 2 | 18 | 0.596227 | arsenate reductase | |
SPH_1579 | 1 | 15 | 1.894285 | O6-methylguanine-DNA methyltransferase | |
SPH_1580 | -1 | 17 | 1.321306 | acetyltransferase | |
SPH_1581 | -2 | 17 | 1.654521 | hypothetical protein | |
SPH_1582 | -1 | 18 | 1.411802 | hemolysin-3 (hemolysin III) (Hly-III) | |
SPH_1583 | 0 | 26 | 1.576183 | glutamine amidotransferase subunit PdxT | |
SPH_1584 | 1 | 30 | 1.380128 | pyridoxal biosynthesis lyase PdxS | |
SPH_1585 | 2 | 30 | 0.925600 | NADH oxidase (noxase) | |
SPH_1586 | 1 | 25 | 1.440288 | thiamine biosynthesis lipoprotein | |
SPH_1587 | 2 | 25 | 0.120261 | NADPH-dependent FMN reductase domain-containing | |
SPH_1588 | 0 | 20 | 0.573959 | NADPH-dependent FMN reductase domain-containing | |
SPH_1589 | -1 | 11 | -0.129193 | hypothetical protein | |
SPH_1590 | -1 | 11 | -0.110735 | glycyl-tRNA synthetase subunit beta | |
SPH_1591 | -1 | 11 | -0.385808 | glycyl-tRNA synthetase subunit alpha | |
SPH_1592 | 0 | 12 | -0.877468 | hypothetical protein | |
SPH_1593 | 0 | 15 | -0.098542 | 2,5-diketo-D-gluconate reductase A | |
SPH_1594 | 0 | 20 | 0.412644 | peptidoglycan GlcNAc deacetylase | |
SPH_1595 | 2 | 27 | 0.919093 | hypothetical protein | |
SPH_1596 | 1 | 27 | 1.465343 | oxidoreductase | |
SPH_1597 | 2 | 31 | 1.534342 | DEAD RNA helicase | |
SPH_1598 | 3 | 29 | 0.779536 | transposase | |
SPH_1601 | 3 | 33 | 0.688453 | elongation factor Tu | |
SPH_1602 | 3 | 29 | 0.635953 | hypothetical protein | |
SPH_1603 | 3 | 30 | 0.680848 | glycerol facilitator-aquaporin gla |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_1580 | SACTRNSFRASE | 30 | 0.003 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_1585 | NUCEPIMERASE | 34 | 0.001 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_1598 | BCTERIALGSPF | 31 | 0.003 | Bacterial general secretion pathway protein F signa... | |
>BCTERIALGSPF#Bacterial general secretion pathway protein F | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_1601 | TCRTETOQM | 81 | 2e-18 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family |
25 | SPH_1744 | SPH_1753 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
SPH_1744 | 2 | 26 | 1.407335 | response regulator | |
SPH_1745 | -1 | 24 | 2.811636 | hypothetical protein | |
SPH_1746 | -1 | 26 | 3.594746 | hypothetical protein | |
SPH_1747 | -2 | 23 | 4.349682 | Rrf2 family protein | |
SPH_1749 | -2 | 23 | 4.195982 | iron-dependent transcriptional regulator | |
SPH_1752 | -3 | 21 | 3.904889 | D-tyrosyl-tRNA(Tyr) deacylase | |
SPH_1753 | -3 | 19 | 3.142423 | guanosine-3',5'-bis(diphosphate) |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_1744 | HTHFIS | 78 | 7e-19 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. |
26 | SPH_1797 | SPH_1808 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
SPH_1797 | -1 | 16 | 3.456213 | neuraminidase | |
SPH_1798 | 0 | 23 | 4.654298 | hypothetical protein | |
SPH_1800 | -1 | 20 | 4.749357 | xylan esterase 1 | |
SPH_1801 | -2 | 16 | 4.313800 | ATP-dependent DNA helicase RecG | |
SPH_1802 | -1 | 16 | 3.413799 | alanine racemase | |
SPH_1803 | -1 | 16 | 1.702138 | 4'-phosphopantetheinyl transferase | |
SPH_1804 | -1 | 15 | 0.468081 | phospho-2-dehydro-3-deoxyheptonate aldolase | |
SPH_1805 | -1 | 11 | -1.212128 | phospho-2-dehydro-3-deoxyheptonate aldolase | |
SPH_1806 | -1 | 11 | -2.239446 | preprotein translocase subunit SecA | |
SPH_1807 | 3 | 20 | -7.130111 | hypothetical protein | |
SPH_1808 | -1 | 13 | -3.961326 | ABC transporter ATP-binding protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_1802 | ALARACEMASE | 352 | e-123 | Alanine racemase signature. | |
>ALARACEMASE#Alanine racemase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_1803 | ENTSNTHTASED | 27 | 0.017 | Enterobactin synthetase component D signature. | |
>ENTSNTHTASED#Enterobactin synthetase component D signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_1806 | SECA | 1055 | 0.0 | SecA protein signature. | |
>SECA#SecA protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_1808 | PF05272 | 31 | 0.003 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein |
27 | SPH_1826 | SPH_1855 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
SPH_1826 | 2 | 26 | 2.624021 | ABC transporter ATP-binding protein - Na+ | |
SPH_1827 | 2 | 29 | 2.768207 | chlorohydrolase | |
SPH_1828 | 0 | 24 | 3.961459 | SNARE associated Golgi protein | |
SPH_1829 | 0 | 21 | 3.323865 | fructokinase | |
SPH_1830 | 0 | 19 | 3.034382 | pts system, sucrose-specific IIBC component | |
SPH_1831 | -1 | 18 | 2.457355 | hypothetical protein | |
SPH_1832 | -1 | 18 | 2.951034 | sucrose-6-phosphate hydrolase (Sucrase) | |
SPH_1835 | 0 | 22 | 3.468061 | hydroxymethylglutaryl-CoA reductase, | |
SPH_1836 | -2 | 19 | 2.108271 | hydroxymethylglutaryl-CoA synthase | |
SPH_1837 | -3 | 17 | 2.190638 | hypothetical protein | |
SPH_1838 | -3 | 17 | 2.732454 | IS4 family transposase | |
SPH_1839 | -2 | 17 | 3.467709 | hypothetical protein | |
SPH_1840 | -1 | 19 | 4.342851 | hypothetical protein | |
SPH_1841 | -1 | 16 | 4.115318 | Stk1 | |
SPH_1842 | -1 | 15 | 4.319332 | protein phosphatase PrpC | |
SPH_1843 | -1 | 14 | 4.554075 | ribosomal RNA small subunit methyltransferase B | |
SPH_1844 | -1 | 14 | 4.425751 | methionyl-tRNA formyltransferase | |
SPH_1845 | 0 | 15 | 4.088629 | primosome assembly protein PriA | |
SPH_1846 | 0 | 14 | 3.210255 | DNA-directed RNA polymerase subunit omega | |
SPH_1847 | 0 | 18 | 3.632800 | guanylate kinase | |
SPH_1848 | 1 | 20 | 3.696236 | hypothetical protein | |
SPH_1849 | 0 | 22 | 2.227693 | addiction module antitoxin | |
SPH_1850 | 1 | 24 | 2.928659 | prevent-host-death family protein | |
SPH_1851 | -1 | 25 | 3.561401 | hypothetical protein | |
SPH_1852 | -1 | 23 | 2.541597 | SAM-dependent methyltransferase | |
SPH_1853 | -2 | 20 | 2.688095 | iojap-like protein | |
SPH_1854 | -1 | 21 | 2.679640 | isochorismatase | |
SPH_1855 | -1 | 23 | 3.254259 | hypothetical protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_1848 | RTXTOXIND | 42 | 5e-06 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_1855 | ENTSNTHTASED | 28 | 0.015 | Enterobactin synthetase component D signature. | |
>ENTSNTHTASED#Enterobactin synthetase component D signature. |
28 | SPH_1980 | SPH_1995 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
SPH_1980 | 0 | 24 | 3.139969 | MarR family transcriptional regulator | |
SPH_1981 | 0 | 27 | 3.666148 | hypothetical protein | |
SPH_1982 | 0 | 28 | 3.643368 | glutamyl aminopeptidase | |
SPH_1983 | 2 | 34 | 3.159343 | hypothetical protein | |
SPH_1985 | 1 | 31 | 3.952070 | ABC transporter membrane-spanning permease - | |
SPH_1986 | 1 | 28 | 3.660731 | ABC transporter membrane-spanning permease - | |
SPH_1987 | 0 | 26 | 4.009634 | ferrichrome ABC transporter ATP-binding protein | |
SPH_1988 | 2 | 26 | 3.666039 | iron-compound ABC transporter | |
SPH_1989 | 1 | 31 | 4.042898 | hypothetical protein | |
SPH_1990 | 0 | 31 | 4.455593 | ribosomal large subunit pseudouridine synthase | |
SPH_1991 | 2 | 26 | 3.725539 | segregation and condensation protein B | |
SPH_1992 | 0 | 27 | 4.466632 | segregation and condensation protein A | |
SPH_1993 | -1 | 21 | 4.019960 | site-specific tyrosine recombinase XerD-like | |
SPH_1994 | 0 | 17 | 3.223773 | CBS domain-containing protein | |
SPH_1995 | 0 | 15 | 3.388607 | phosphodiesterase |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_1988 | FERRIBNDNGPP | 55 | 1e-10 | Ferrichrome-binding periplasmic protein signature. | |
>FERRIBNDNGPP#Ferrichrome-binding periplasmic protein signature. |
29 | SPH_2066 | SPH_2081 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
SPH_2066 | -2 | 22 | -5.868981 | hypothetical protein | |
SPH_2067 | -2 | 26 | -7.004430 | hypothetical protein | |
SPH_2069 | 0 | 30 | -8.161889 | mobile genetic element | |
SPH_2070 | 0 | 30 | -8.141425 | mobile genetic element | |
SPH_2071 | 0 | 33 | -9.311990 | hypothetical protein | |
SPH_2072 | -1 | 33 | -9.544711 | ABC transporter substrate-binding protein | |
SPH_2073 | -1 | 32 | -9.394403 | spermidine/putrescine ABC transporter | |
SPH_2074 | 0 | 32 | -9.216049 | binding-protein-dependent transport systems | |
SPH_2075 | -2 | 30 | -9.290008 | MgtC/SapB transporter | |
SPH_2076 | -1 | 28 | -9.124959 | hydrolase | |
SPH_2077 | -2 | 27 | -7.969667 | transcriptional regulator, LacI family protein | |
SPH_2079 | 0 | 26 | -5.987415 | IS4 family transposase | |
SPH_2080 | 2 | 28 | -6.897734 | hypothetical protein | |
SPH_2081 | -1 | 21 | -4.110600 | hypothetical protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_2073 | TACYTOLYSIN | 28 | 0.045 | Bacterial thiol-activated pore-forming cytolysin sig... | |
>TACYTOLYSIN#Bacterial thiol-activated pore-forming cytolysin | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_2077 | PF05307 | 31 | 0.007 | Bundlin | |
>PF05307#Bundlin |
30 | SPH_2091 | SPH_2102 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
SPH_2091 | -1 | 20 | -3.273206 | regulator of lytrabc operon | |
SPH_2092 | -2 | 14 | -2.387521 | acetyltransferase | |
SPH_2093 | -2 | 14 | -2.419421 | hypothetical protein | |
SPH_2094 | -2 | 14 | -2.884222 | lipoprotein | |
SPH_2095 | -3 | 14 | -2.130488 | transcriptional activator | |
SPH_2096 | 0 | 17 | 2.503442 | hypothetical protein | |
SPH_2097 | 3 | 24 | 3.048636 | bacteriocin-associated integral membrane | |
SPH_2098 | 5 | 31 | 3.784918 | peptide ABC transporter ATPase | |
SPH_2099 | 5 | 28 | 3.428542 | hypothetical protein | |
SPH_2100 | 4 | 27 | 3.640265 | nucleoside diphosphate kinase | |
SPH_2101 | 4 | 27 | 3.625162 | DNA-directed RNA polymerase subunit beta' | |
SPH_2102 | 2 | 19 | 3.144335 | DNA-directed RNA polymerase subunit beta |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_2092 | SACTRNSFRASE | 50 | 4e-10 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. |
31 | SPH_2114 | SPH_2123 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
SPH_2114 | -2 | 14 | 3.216355 | membrane protein | |
SPH_2115 | -2 | 15 | 3.090103 | rRNA/tRNA methylase | |
SPH_2116 | -2 | 19 | 3.472329 | acylphosphatase | |
SPH_2117 | -1 | 19 | 3.822887 | OxaA-like protein precursor | |
SPH_2118 | -2 | 19 | 3.966889 | pyruvate formate-lyase 1-activating enzyme | |
SPH_2119 | -2 | 19 | 4.047163 | diaminopimelate decarboxylase | |
SPH_2120 | -2 | 19 | 3.818773 | pur operon repressor | |
SPH_2121 | -3 | 21 | 4.520999 | 3'-5' exoribonuclease | |
SPH_2122 | -3 | 21 | 4.296259 | competence-induced protein Ccs50 | |
SPH_2123 | -1 | 22 | 3.179524 | thiamine pyrophosphokinase |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_2117 | 60KDINNERMP | 116 | 2e-31 | 60kDa inner membrane protein signature. | |
>60KDINNERMP#60kDa inner membrane protein signature. |
32 | SPH_2132 | SPH_2146 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
SPH_2132 | -1 | 15 | 3.360847 | primase-like protein | |
SPH_2133 | -1 | 14 | 3.187710 | TatD family deoxyribonuclease | |
SPH_2134 | -3 | 13 | 2.907485 | cell wall surface anchor family protein | |
SPH_2135 | -1 | 17 | 3.555880 | 50S ribosomal protein L34 | |
SPH_2136 | -2 | 17 | 3.448353 | aminotransferase | |
SPH_2137 | -3 | 15 | 2.571853 | hypothetical protein | |
SPH_2138 | -2 | 16 | 3.407079 | universal stress protein | |
SPH_2139 | -3 | 14 | 2.204108 | Cof family protein | |
SPH_2141 | -2 | 12 | 1.392580 | L-asparaginase | |
SPH_2140 | -2 | 14 | 0.130104 | chlorohydrolase | |
SPH_2142 | -4 | 14 | 0.007059 | catabolite control protein A | |
SPH_2143 | -2 | 16 | -0.223111 | response regulator | |
SPH_2144 | 0 | 17 | -1.431970 | histidine kinase | |
SPH_2145 | -1 | 15 | -2.329480 | ABC-type multidrug transport system, permease | |
SPH_2146 | 1 | 15 | -3.108895 | ABC transporter ATP-binding protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_2134 | GPOSANCHOR | 35 | 3e-04 | Gram-positive coccus surface protein anchor signature. | |
>GPOSANCHOR#Gram-positive coccus surface protein anchor signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_2143 | HTHFIS | 71 | 8e-17 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_2144 | PF06580 | 35 | 5e-04 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_2146 | PF05272 | 31 | 0.005 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein |
33 | SPH_2222 | SPH_2290 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
SPH_2222 | -1 | 18 | -3.826381 | threonine synthase | |
SPH_2223 | 1 | 26 | -5.951858 | hypothetical protein | |
SPH_2224 | 1 | 31 | -6.735755 | hypothetical protein | |
SPH_2225 | 0 | 31 | -6.332910 | hypothetical protein | |
SPH_2226 | 0 | 30 | -6.819594 | hypothetical protein | |
SPH_2227 | 0 | 27 | -6.942770 | hypothetical protein | |
SPH_2228 | 0 | 26 | -6.648093 | hypothetical protein | |
SPH_2229 | 1 | 27 | -7.344480 | hypothetical protein | |
SPH_2230 | 1 | 27 | -7.395838 | hypothetical protein | |
SPH_2231 | 1 | 28 | -7.881916 | Ser/Thr protein phosphatase | |
SPH_2232 | 2 | 29 | -8.054773 | Rep protein | |
SPH_2233 | 0 | 22 | -6.610772 | hypothetical protein | |
SPH_2234 | -1 | 21 | -6.268243 | phage integrase site specific recombinase | |
SPH_2235 | -1 | 18 | -3.883254 | metal dependent phosphohydrolase, HD region | |
SPH_2236 | -1 | 23 | -2.435885 | CopG family protein | |
SPH_2237 | -1 | 23 | -2.329699 | serine/threonine protein phosphatase | |
SPH_2238 | 1 | 24 | -0.839453 | transposase | |
SPH_2255 | 0 | 20 | 0.388712 | ************cytidine/deoxycytidylate deaminase | |
SPH_2256 | 1 | 21 | 0.336536 | glutamyl-tRNA synthetase | |
SPH_2257 | 1 | 17 | 0.684886 | glucose-6-phosphate isomerase | |
SPH_2258 | 1 | 16 | 1.727112 | hypothetical protein | |
SPH_2259 | 0 | 20 | 3.370877 | glutamine amidotransferase | |
SPH_2260 | -1 | 21 | 3.102707 | ABC transporter ATP-binding/permease | |
SPH_2261 | -1 | 16 | 3.263512 | hypothetical protein | |
SPH_2262 | -2 | 16 | 3.128418 | transposase | |
SPH_2263 | -2 | 14 | 2.884481 | ABC transporter ATP-binding/permease | |
SPH_2264 | -3 | 14 | 2.407179 | DNA mismatch repair protein MutS | |
SPH_2265 | -2 | 13 | 0.731640 | arginine repressor ArgR | |
SPH_2266 | -1 | 16 | 0.872303 | arginyl-tRNA synthetase | |
SPH_2267 | 0 | 19 | 0.342646 | mobile genetic element | |
SPH_2268 | 2 | 20 | 0.295634 | hypothetical protein | |
SPH_2269 | 2 | 21 | 0.124111 | alkaline phosphatase synthesis transcriptional | |
SPH_2270 | 2 | 22 | 0.033582 | histidine kinase PnpS | |
SPH_2271 | 3 | 22 | -0.648500 | ABC transporter substrate-binding protein - | |
SPH_2272 | 2 | 19 | -0.015030 | phosphate ABC transporter permease PstC | |
SPH_2273 | -1 | 19 | 0.651015 | phosphate ABC transporter permease PstA | |
SPH_2274 | -1 | 17 | 1.191531 | phosphate transporter ATP-binding protein | |
SPH_2275 | -2 | 15 | 1.856362 | phosphate transport system regulatory protein | |
SPH_2276 | -3 | 16 | 3.225487 | transposase, IS1380-Spn1 related, truncation | |
SPH_2278 | -3 | 15 | 4.058788 | NAD(P)H-dependent glycerol-3-phosphate | |
SPH_2279 | -3 | 15 | 3.562599 | UTP-glucose-1-phosphate uridylyltransferase | |
SPH_2282 | -1 | 17 | 3.057014 | peptidase, S54 | |
SPH_2283 | -3 | 12 | 3.174957 | 5-formyltetrahydrofolate cyclo-ligase | |
SPH_2284 | -3 | 11 | 1.720677 | M20/M25/M40 family peptidase | |
SPH_2285 | -2 | 10 | 0.802599 | galactoside O-acetyltransferase | |
SPH_2286 | -2 | 10 | 0.379773 | membrane protein | |
SPH_2287 | -1 | 11 | 0.432949 | penicillin-binding protein 1B | |
SPH_2288 | 2 | 26 | -0.165458 | tyrosyl-tRNA synthetase | |
SPH_2289 | 1 | 27 | -0.130622 | P-type ATPase-metal/cation transport | |
SPH_2290 | 3 | 41 | 0.855770 | hypothetical protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_2265 | ARGREPRESSOR | 175 | 2e-59 | Bacterial arginine repressor signature. | |
>ARGREPRESSOR#Bacterial arginine repressor signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_2269 | HTHFIS | 96 | 3e-25 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_2270 | PF06580 | 43 | 1e-06 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_2286 | TCRTETA | 30 | 0.010 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. |
34 | SPH_2319 | SPH_2359 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
SPH_2319 | 0 | 26 | -4.939184 | transketolase, C- subunit | |
SPH_2320 | 0 | 25 | -4.747358 | transketolase | |
SPH_2321 | 0 | 23 | -4.332652 | PTS system ascorbate-specific transporter | |
SPH_2322 | -1 | 21 | -4.331468 | phosphotransferase system, galactitol-specific | |
SPH_2323 | 1 | 24 | -5.532860 | transcriptional regulator, BglG family protein | |
SPH_2324 | 2 | 25 | -4.108737 | hypothetical protein | |
SPH_2325 | 0 | 20 | -1.499130 | hypothetical protein | |
SPH_2326 | -1 | 17 | -0.317579 | 50S ribosomal protein L32 | |
SPH_2327 | -1 | 14 | 1.279605 | 50S ribosomal protein L33 | |
SPH_2328 | -2 | 13 | 1.949338 | choline binding protein PcpA | |
SPH_2332 | -1 | 22 | 5.076209 | hypothetical protein | |
SPH_2334 | -2 | 21 | 5.448006 | N-acetyl-beta-D-glucosaminidase | |
SPH_2335 | -2 | 19 | 5.005729 | ROK family protein | |
SPH_2336 | -2 | 18 | 4.542172 | sugar hydrolase | |
SPH_2337 | -2 | 18 | 4.170205 | twin-arginine translocation pathway signal | |
SPH_2338 | -3 | 19 | 3.598855 | cell wall antigen | |
SPH_2339 | -3 | 18 | 3.038815 | FucA | |
SPH_2340 | -2 | 25 | 1.968859 | arginine deiminase | |
SPH_2341 | -2 | 20 | 2.210772 | ornithine carbamoyltransferase | |
SPH_2342 | -2 | 15 | 1.985176 | carbamate kinase | |
SPH_2343 | -1 | 12 | 2.061343 | arginine-ornithine antiporter | |
SPH_2344 | 0 | 15 | -1.015573 | hypothetical protein | |
SPH_2348 | 1 | 22 | -3.238547 | signal peptide, ysirk family protein | |
SPH_2350 | 1 | 21 | -3.472568 | SPFH domain-containing protein/band 7 family | |
SPH_2351 | 3 | 25 | -3.989702 | NAD-dependent methanol dehydrogenase (medh) | |
SPH_2352 | 3 | 27 | -4.812970 | L-fucose isomerase | |
SPH_2353 | 4 | 30 | -6.464087 | glycosy hydrolase | |
SPH_2354 | 4 | 31 | -6.630074 | large secreted protein | |
SPH_2355 | 2 | 29 | -5.779586 | mannose permease IID component | |
SPH_2356 | 0 | 29 | -5.490958 | phosphotransferase system sugar-specific EII | |
SPH_2357 | 1 | 27 | -6.136582 | PTS system, IIB component | |
SPH_2358 | 1 | 27 | -5.798687 | PTS system, IIA component | |
SPH_2359 | -2 | 18 | -3.132100 | fucose operon FucU protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_2323 | LPSBIOSNTHSS | 29 | 0.046 | Lipopolysaccharide core biosynthesis protein signat... | |
>LPSBIOSNTHSS#Lipopolysaccharide core biosynthesis protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_2340 | ARGDEIMINASE | 552 | 0.0 | Bacterial arginine deiminase signature. | |
>ARGDEIMINASE#Bacterial arginine deiminase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_2342 | CARBMTKINASE | 407 | e-146 | Bacterial carbamate kinase signature. | |
>CARBMTKINASE#Bacterial carbamate kinase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_2343 | RTXTOXINA | 37 | 2e-04 | Gram-negative bacterial RTX toxin determinant A family... | |
>RTXTOXINA#Gram-negative bacterial RTX toxin determinant A family | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_2348 | GPOSANCHOR | 33 | 1e-04 | Gram-positive coccus surface protein anchor signature. | |
>GPOSANCHOR#Gram-positive coccus surface protein anchor signature. |
35 | SPH_0146 | SPH_0158 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
SPH_0146 | 0 | 23 | -0.380388 | hypothetical protein | |
SPH_0147 | -3 | 20 | 2.675339 | hypothetical protein | |
SPH_0148 | -3 | 22 | 4.288523 | transport/processing ATP-binding protein ComA | |
SPH_0149 | -1 | 20 | 4.617908 | transport protein ComB | |
SPH_0150 | 1 | 22 | 4.954301 | phosphoribosylaminoimidazole-succinocarboxamide | |
SPH_0151 | 1 | 19 | 4.374390 | phosphoribosylaminoimidazole-succinocarboxamide | |
SPH_0152 | 1 | 20 | 4.801854 | phosphoribosylformylglycinamidine synthase | |
SPH_0153 | -1 | 20 | 5.182313 | amidophosphoribosyltransferase | |
SPH_0154 | -1 | 21 | 4.842609 | phosphoribosylaminoimidazole synthetase | |
SPH_0155 | -1 | 20 | 4.990839 | phosphoribosylglycinamide formyltransferase | |
SPH_0156 | 0 | 21 | 5.212157 | teicoplanin resistance protein | |
SPH_0157 | 1 | 24 | 6.503539 | bifunctional | |
SPH_0158 | 1 | 25 | 6.353635 | phosphoribosylamine--glycine ligase |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_0146 | PF05272 | 33 | 9e-04 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_0148 | ANTHRAXTOXNA | 31 | 0.016 | Anthrax toxin LF subunit signature. | |
>ANTHRAXTOXNA#Anthrax toxin LF subunit signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_0149 | RTXTOXIND | 63 | 8e-13 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_0150 | RTXTOXINA | 28 | 0.033 | Gram-negative bacterial RTX toxin determinant A family... | |
>RTXTOXINA#Gram-negative bacterial RTX toxin determinant A family | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_0152 | FLGMRINGFLIF | 31 | 0.036 | Flagellar M-ring protein signature. | |
>FLGMRINGFLIF#Flagellar M-ring protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_0154 | BINARYTOXINA | 30 | 0.015 | Clostridial binary toxin A signature. | |
>BINARYTOXINA#Clostridial binary toxin A signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_0155 | SUBTILISIN | 30 | 0.006 | Subtilisin serine protease family (S8) signature. | |
>SUBTILISIN#Subtilisin serine protease family (S8) signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_0158 | ARGDEIMINASE | 31 | 0.010 | Bacterial arginine deiminase signature. | |
>ARGDEIMINASE#Bacterial arginine deiminase signature. |
36 | SPH_0196 | SPH_0202 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
SPH_0196 | 2 | 21 | -0.008985 | hypothetical protein | |
SPH_0197 | -2 | 19 | 0.481271 | hypothetical protein | |
SPH_0198 | -2 | 18 | 0.452891 | hypothetical protein | |
SPH_0199 | 0 | 17 | 0.355832 | transcription regulator | |
SPH_0200 | -1 | 17 | 1.274429 | cyanate permease | |
SPH_0201 | -1 | 15 | 0.492384 | glycosyl transferase | |
SPH_0202 | -1 | 18 | 2.435371 | CapD protein, required for the biosynthesis of |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_0196 | IGASERPTASE | 42 | 3e-06 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_0198 | TCRTETB | 28 | 0.041 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_0200 | TCRTETA | 44 | 6e-07 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_0202 | NUCEPIMERASE | 82 | 4e-19 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. |
37 | SPH_0691 | SPH_0710 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
SPH_0691 | 1 | 14 | 0.724135 | leucine-rich protein | |
SPH_0692 | 2 | 16 | 0.818304 | hypothetical protein | |
SPH_0694 | 1 | 18 | 2.101393 | peptide ABC transporter permease | |
SPH_0695 | 0 | 19 | 1.972345 | peptide ABC transporter ATP-binding protein | |
SPH_0696 | 0 | 23 | 2.298497 | peptide ABC transporter permease | |
SPH_0697 | 1 | 22 | 2.003959 | VncR, response regulator | |
SPH_0698 | 0 | 24 | 1.881378 | VncS, histidine kinase | |
SPH_0699 | -2 | 29 | 1.782856 | fructose-bisphosphate aldolase | |
SPH_0700 | -1 | 18 | 2.032290 | oxidoreductase, NAD-binding | |
SPH_0701 | -2 | 17 | 2.847271 | ABC transporter membrane-spanning permease - | |
SPH_0702 | -1 | 16 | 2.888894 | ABC transporter membrane-spanning permease - | |
SPH_0703 | -1 | 15 | 1.597080 | glutamine ABC transporter substrate-binding | |
SPH_0704 | -1 | 15 | 0.495329 | glutamine transport ATP-binding protein GlnQ | |
SPH_0705 | -2 | 18 | 0.666928 | single-stranded-DNA-specific exonuclease RecJ | |
SPH_0706 | -1 | 17 | 0.985591 | metallo-beta-lactamase superfamily protein | |
SPH_0707 | 0 | 18 | 0.581802 | tributyrin esterase | |
SPH_0708 | -1 | 16 | 0.406371 | MurM | |
SPH_0709 | -2 | 14 | 1.620695 | MurN | |
SPH_0710 | -2 | 15 | 3.430768 | matrixin family protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_0691 | HTHFIS | 34 | 4e-04 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_0695 | PF05272 | 32 | 0.003 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_0697 | HTHFIS | 85 | 2e-21 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_0698 | PF06580 | 33 | 0.003 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_0700 | ACRIFLAVINRP | 31 | 0.007 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_0704 | PF05272 | 29 | 0.016 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_0708 | SECA | 32 | 0.006 | SecA protein signature. | |
>SECA#SecA protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_0709 | RTXTOXINA | 30 | 0.024 | Gram-negative bacterial RTX toxin determinant A family... | |
>RTXTOXINA#Gram-negative bacterial RTX toxin determinant A family | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_0710 | CABNDNGRPT | 31 | 0.004 | NodO calcium binding signature. | |
>CABNDNGRPT#NodO calcium binding signature. |
38 | SPH_0754 | SPH_0763 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
SPH_0754 | -1 | 10 | -0.032924 | thioredoxin family protein | |
SPH_0755 | -1 | 8 | 0.561267 | peptide methionine sulfoxide reductase | |
SPH_0756 | 0 | 9 | 0.359378 | response regulator | |
SPH_0757 | -1 | 9 | 0.222183 | histidine kinase | |
SPH_0758 | -1 | 12 | 0.124726 | hypothetical protein | |
SPH_0759 | -1 | 11 | 0.037603 | zinc metalloprotease ZmpB | |
SPH_0760 | -2 | 14 | 2.361546 | chorismate binding enzyme | |
SPH_0761 | -2 | 13 | 1.919285 | hypothetical protein | |
SPH_0762 | -1 | 14 | 2.974519 | Excalibur domain-containing protein | |
SPH_0763 | -3 | 17 | 3.483355 | glucokinase (glucose kinase) |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_0754 | adhesinb | 27 | 0.047 | Adhesin B signature. | |
>adhesinb#Adhesin B signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_0756 | HTHFIS | 95 | 1e-24 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_0757 | PF06580 | 199 | 3e-61 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_0759 | IGASERPTASE | 54 | 5e-09 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_0763 | PF03309 | 35 | 2e-04 | Bvg accessory factor | |
>PF03309#Bvg accessory factor |
39 | SPH_0895 | SPH_0901 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
SPH_0895 | 0 | 12 | 1.356333 | 3-ketoacyl-ACP reductase | |
SPH_0896 | -1 | 11 | 0.244656 | MutT/nudix family protein | |
SPH_0897 | -2 | 10 | -0.015482 | PEP-utilizing enzyme family protein | |
SPH_0898 | -1 | 13 | 0.767224 | hypothetical protein | |
SPH_0899 | 0 | 10 | 0.398197 | aminopeptidase | |
SPH_0900 | 1 | 13 | -0.940100 | transcriptional regulatory protein CiaR | |
SPH_0901 | -1 | 12 | -0.446937 | sensor protein CiaH |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_0895 | DHBDHDRGNASE | 97 | 2e-26 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_0897 | PHPHTRNFRASE | 76 | 1e-17 | Phosphoenolpyruvate-protein phosphotransferase sign... | |
>PHPHTRNFRASE#Phosphoenolpyruvate-protein phosphotransferase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_0900 | HTHFIS | 85 | 2e-21 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_0901 | PF06580 | 35 | 5e-04 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase |
40 | SPH_0976 | SPH_0984 | N ![]() | Y ![]() | Y | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
SPH_0976 | -2 | 14 | 0.185656 | penicillin-binding protein 3 | |
SPH_0977 | -2 | 11 | 1.208330 | membrane protein | |
SPH_0979 | -2 | 15 | 2.167635 | *transcriptional repressor of the fructose | |
SPH_0980 | -1 | 14 | 2.389062 | 1-phosphofructokinase | |
SPH_0981 | -1 | 15 | 2.680581 | PTS system, fructose family, IIC subunit | |
SPH_0982 | -1 | 13 | 2.065546 | hypothetical protein | |
SPH_0983 | -1 | 12 | 2.237935 | DNA translocase FtsK | |
SPH_0984 | -3 | 15 | 2.024285 | hypothetical protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_0976 | BLACTAMASEA | 32 | 0.003 | Beta-lactamase class A signature. | |
>BLACTAMASEA#Beta-lactamase class A signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_0979 | ARGREPRESSOR | 36 | 6e-05 | Bacterial arginine repressor signature. | |
>ARGREPRESSOR#Bacterial arginine repressor signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_0980 | LCRVANTIGEN | 30 | 0.016 | Low calcium response V antigen signature. | |
>LCRVANTIGEN#Low calcium response V antigen signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_0983 | TYPE3IMSPROT | 34 | 0.002 | Type III secretion system inner membrane S protein ... | |
>TYPE3IMSPROT#Type III secretion system inner membrane S protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_0984 | IGASERPTASE | 30 | 0.002 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. |
41 | SPH_1067 | SPH_1073 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
SPH_1067 | -1 | 14 | 0.777051 | endo-beta-N-acetylglucosaminidase | |
SPH_1066 | 0 | 19 | 2.191991 | fibronectin/fibrinogen binding protein | |
SPH_1068 | 0 | 18 | 2.542155 | metalloprotease | |
SPH_1069 | 0 | 20 | 2.471913 | diacylglycerol kinase (dagk) (diglyceride | |
SPH_1070 | 0 | 20 | 2.314021 | GTP-binding protein Era | |
SPH_1071 | -1 | 18 | 1.901130 | formamidopyrimidine-DNA glycosylase | |
SPH_1072 | -2 | 18 | 1.935643 | dephospho-CoA kinase | |
SPH_1073 | -2 | 17 | 1.661345 | multidrug resistance protein MdtG |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_1067 | FLGFLGJ | 30 | 0.027 | Flagellar protein FlgJ signature. | |
>FLGFLGJ#Flagellar protein FlgJ signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_1066 | FbpA_PF05833 | 685 | 0.0 | Fibronectin-binding protein | |
>FbpA_PF05833#Fibronectin-binding protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_1070 | TCRTETOQM | 36 | 1e-04 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_1073 | TCRTETA | 106 | 1e-27 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. |
42 | SPH_1627 | SPH_1633 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
SPH_1627 | 2 | 15 | 0.357878 | acetyltransferase, gnat family protein | |
SPH_1628 | 1 | 15 | 0.863147 | hypothetical protein | |
SPH_1629 | 0 | 13 | 0.657210 | transcription elongation factor GreA | |
SPH_1630 | 1 | 14 | 1.646700 | aminodeoxychorismate lyase | |
SPH_1631 | 2 | 16 | 1.863387 | acetyltransferase | |
SPH_1632 | 0 | 15 | 2.213779 | acetyltransferase | |
SPH_1633 | -1 | 13 | 1.409887 | UDP-N-acetylmuramate--L-alanine ligase |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_1627 | SACTRNSFRASE | 36 | 1e-05 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_1630 | PF03544 | 31 | 0.013 | Gram-negative bacterial tonB protein | |
>PF03544#Gram-negative bacterial tonB protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_1632 | SACTRNSFRASE | 40 | 1e-06 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_1633 | ACETATEKNASE | 32 | 0.006 | Acetate kinase family signature. | |
>ACETATEKNASE#Acetate kinase family signature. |
43 | SPH_1759 | SPH_1769 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
SPH_1759 | -1 | 20 | 2.187804 | manganese ABC transporter substrate-binding | |
SPH_1760 | -1 | 19 | 2.904755 | thiol peroxidase | |
SPH_1761 | 0 | 19 | 2.543475 | ABC transporter permease | |
SPH_1762 | 1 | 21 | 1.140914 | macrolide export ATP-binding/permease MacB | |
SPH_1765 | 2 | 25 | 0.641060 | phosphoglyceromutase | |
SPH_1767 | 0 | 17 | 0.094441 | isoleucyl-tRNA synthetase | |
SPH_1768 | 1 | 21 | -2.209942 | hypothetical protein | |
SPH_1769 | 0 | 18 | -0.765434 | cell-division initiation protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_1759 | ADHESNFAMILY | 450 | e-163 | Adhesin family signature. | |
>ADHESNFAMILY#Adhesin family signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_1761 | RTXTOXIND | 51 | 2e-08 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_1762 | PF05272 | 30 | 0.006 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_1769 | IGASERPTASE | 29 | 0.022 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. |
44 | SPH_1802 | SPH_1808 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
SPH_1802 | -1 | 16 | 3.413799 | alanine racemase | |
SPH_1803 | -1 | 16 | 1.702138 | 4'-phosphopantetheinyl transferase | |
SPH_1804 | -1 | 15 | 0.468081 | phospho-2-dehydro-3-deoxyheptonate aldolase | |
SPH_1805 | -1 | 11 | -1.212128 | phospho-2-dehydro-3-deoxyheptonate aldolase | |
SPH_1806 | -1 | 11 | -2.239446 | preprotein translocase subunit SecA | |
SPH_1807 | 3 | 20 | -7.130111 | hypothetical protein | |
SPH_1808 | -1 | 13 | -3.961326 | ABC transporter ATP-binding protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_1802 | ALARACEMASE | 352 | e-123 | Alanine racemase signature. | |
>ALARACEMASE#Alanine racemase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_1803 | ENTSNTHTASED | 27 | 0.017 | Enterobactin synthetase component D signature. | |
>ENTSNTHTASED#Enterobactin synthetase component D signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_1806 | SECA | 1055 | 0.0 | SecA protein signature. | |
>SECA#SecA protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_1808 | PF05272 | 31 | 0.003 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein |
45 | SPH_2340 | SPH_2348 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
SPH_2340 | -2 | 25 | 1.968859 | arginine deiminase | |
SPH_2341 | -2 | 20 | 2.210772 | ornithine carbamoyltransferase | |
SPH_2342 | -2 | 15 | 1.985176 | carbamate kinase | |
SPH_2343 | -1 | 12 | 2.061343 | arginine-ornithine antiporter | |
SPH_2344 | 0 | 15 | -1.015573 | hypothetical protein | |
SPH_2348 | 1 | 22 | -3.238547 | signal peptide, ysirk family protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_2340 | ARGDEIMINASE | 552 | 0.0 | Bacterial arginine deiminase signature. | |
>ARGDEIMINASE#Bacterial arginine deiminase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_2342 | CARBMTKINASE | 407 | e-146 | Bacterial carbamate kinase signature. | |
>CARBMTKINASE#Bacterial carbamate kinase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_2343 | RTXTOXINA | 37 | 2e-04 | Gram-negative bacterial RTX toxin determinant A family... | |
>RTXTOXINA#Gram-negative bacterial RTX toxin determinant A family | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_2348 | GPOSANCHOR | 33 | 1e-04 | Gram-positive coccus surface protein anchor signature. | |
>GPOSANCHOR#Gram-positive coccus surface protein anchor signature. |
46 | SPH_2385 | SPH_2393 | N ![]() | Y ![]() | Y | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
SPH_2385 | 0 | 15 | -2.854794 | surface protein PspC | |
SPH_2387 | 0 | 13 | -3.011435 | transposase | |
SPH_2388 | -2 | 12 | -0.196429 | surface protein PspC | |
SPH_2389 | -1 | 18 | -0.461731 | hypothetical protein | |
SPH_2390 | 0 | 18 | 0.853248 | histidine kinase | |
SPH_2391 | -1 | 14 | 2.318097 | response regulator | |
SPH_2392 | -1 | 18 | 3.206542 | hypothetical protein | |
SPH_2393 | -1 | 18 | 3.299215 | chaperone ClpB 1 |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_2385 | IGASERPTASE | 48 | 5e-08 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_2388 | IGASERPTASE | 74 | 1e-15 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_2391 | HTHFIS | 81 | 4e-20 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
SPH_2393 | HTHFIS | 34 | 0.003 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. |